CsGy1G004240 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G004240
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	F-box protein At2g35280-like
Location	Gy14Chr1: 2693767 .. 2695271 (+)
RNA-Seq Expression	CsGy1G004240
Synteny	CsGy1G004240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACCAATCAGCCCAAAAGAGATTCAGTAGCTTTGGACACTCAAATTTCAAGGTATCTTTAATCTTTCTTTTTCATGCAATTTAATATATATGAACCTATATTTTTAAATATAGTAAAATAAATTAAAATAAATTTTAGATTTTATCGATACGATTGATAGAAGTATATCAGTGTCTATTGATGTTTATTATTGAAAGAATCTGAAAACTTGTTATATCTTGTAAATGCTTTGTTAAATTTGCTATTTCTTATGATTTTCTTTTTAGTTATTGTATATTATTACGACAAAATAATTTTTTTAGTCTAAGAAATTTTAACTTTTGGTGTGTTTCGAGTATATTAGAATACGTTTTTTGAATTGGTTTATTTTCAAATAGTGTAAAATTAACTAAAATATTTATAAATATAGCAAAAATTTATTATTTATTTGTGATCGAAGATAATAGATACCATAGTCGAAACCCGAGATAAGTTAGTTTAGTTATTTAATGTATATTTTACTAAATGAAGGCTTTGGAGTCGTCATGTAATAGTGTCCTTGTAGTTTGTGAATTTTGTAGGGTTTGGTTGCTTTCATACACATTTGCTTAATTTTTTCTCACATACAAATGATTGACTTTTGCTTAAAAGTAATTGTAAATAACTTTTATTATTTTTCTAATAAATTATTTTTGTAAAGTTAGTCTGTAATAAATACTTCATCTCAAAATCTATTATCGTTGTTGTTATTGATTTTATTATTACTAATTTTTCATATAATTTATTACATGCAGAATAACAGAAAAGAATCAAATAGACGTCTTATCTCCAACTGTCATTAAATCACTCCCAAACGATTTATTAACCGAAGTTCTTGCAAAAGTTGCAACTTCTTCTTACATTGACTTGATCCAAGCCAAATTAGCCACCAAACATTTTCTTGAAGCATCTAACGACCGATACATATTTCAACATGCGTCTCTTGGAAACTTCAGGAATCTTCTATGGAACAACAGTCCGAAATTTTGGTCCTTCATGGAAACTTGCAACAATAGTGAAAATCCAGAGAGCCTATATCGAAAAGGAATGTTGGAATTTTTCACTCATTGTAAAGAAGCTTCTGGAATGGCTTATTTAAAACGATCGGCTCAAAAAGGGTATGTGGATGCTTGTTATGTATTTGGTGTTATTTTGTATGCTTCCAATTTGAAAGACGAAGGACTTGAGTTCTTGAAGAACAATGAGGTGAAATTAGGGAATAAAATGATAGAATGTCGTCAGAGAGTTAAGGAGTTCGTATCGTATATTTGGATTAAGAATAAGATTTCGTTGTCGGAGGGAGATTCGTCCTATGGTCGGAAGTGTGATAAAAATATTAACTGTAGGGTTAACGAGAAAATAAATGTTTGGGATTCAAAAGATGAGGATGATTATTATGGAAAGTACACGTGTGAAGAGTGTAAATGGAACAACGAGGTTCTTAGATTTTGTAAAATGTTAAGAACGGGAAGATTTAGTTAA

mRNA sequence

ATGACTACCAATCAGCCCAAAAGAGATTCAGTAGCTTTGGACACTCAAATTTCAAGAATAACAGAAAAGAATCAAATAGACGTCTTATCTCCAACTGTCATTAAATCACTCCCAAACGATTTATTAACCGAAGTTCTTGCAAAAGTTGCAACTTCTTCTTACATTGACTTGATCCAAGCCAAATTAGCCACCAAACATTTTCTTGAAGCATCTAACGACCGATACATATTTCAACATGCGTCTCTTGGAAACTTCAGGAATCTTCTATGGAACAACAGTCCGAAATTTTGGTCCTTCATGGAAACTTGCAACAATAGTGAAAATCCAGAGAGCCTATATCGAAAAGGAATGTTGGAATTTTTCACTCATTGTAAAGAAGCTTCTGGAATGGCTTATTTAAAACGATCGGCTCAAAAAGGGTATGTGGATGCTTGTTATGTATTTGGTGTTATTTTGTATGCTTCCAATTTGAAAGACGAAGGACTTGAGTTCTTGAAGAACAATGAGGTGAAATTAGGGAATAAAATGATAGAATGTCGTCAGAGAGTTAAGGAGTTCGTATCGTATATTTGGATTAAGAATAAGATTTCGTTGTCGGAGGGAGATTCGTCCTATGGTCGGAAGTGTGATAAAAATATTAACTGTAGGGTTAACGAGAAAATAAATGTTTGGGATTCAAAAGATGAGGATGATTATTATGGAAAGTACACGTGTGAAGAGTGTAAATGGAACAACGAGGTTCTTAGATTTTGTAAAATGTTAAGAACGGGAAGATTTAGTTAA

Coding sequence (CDS)

ATGACTACCAATCAGCCCAAAAGAGATTCAGTAGCTTTGGACACTCAAATTTCAAGAATAACAGAAAAGAATCAAATAGACGTCTTATCTCCAACTGTCATTAAATCACTCCCAAACGATTTATTAACCGAAGTTCTTGCAAAAGTTGCAACTTCTTCTTACATTGACTTGATCCAAGCCAAATTAGCCACCAAACATTTTCTTGAAGCATCTAACGACCGATACATATTTCAACATGCGTCTCTTGGAAACTTCAGGAATCTTCTATGGAACAACAGTCCGAAATTTTGGTCCTTCATGGAAACTTGCAACAATAGTGAAAATCCAGAGAGCCTATATCGAAAAGGAATGTTGGAATTTTTCACTCATTGTAAAGAAGCTTCTGGAATGGCTTATTTAAAACGATCGGCTCAAAAAGGGTATGTGGATGCTTGTTATGTATTTGGTGTTATTTTGTATGCTTCCAATTTGAAAGACGAAGGACTTGAGTTCTTGAAGAACAATGAGGTGAAATTAGGGAATAAAATGATAGAATGTCGTCAGAGAGTTAAGGAGTTCGTATCGTATATTTGGATTAAGAATAAGATTTCGTTGTCGGAGGGAGATTCGTCCTATGGTCGGAAGTGTGATAAAAATATTAACTGTAGGGTTAACGAGAAAATAAATGTTTGGGATTCAAAAGATGAGGATGATTATTATGGAAAGTACACGTGTGAAGAGTGTAAATGGAACAACGAGGTTCTTAGATTTTGTAAAATGTTAAGAACGGGAAGATTTAGTTAA

Protein sequence

MTTNQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKHFLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEECKWNNEVLRFCKMLRTGRFS*

Homology

[Close]

BLAST of CsGy1G004240 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16
Identity = 58/192 (30.21%), Postives = 98/192 (51.04%), Query Frame = 0


Query: 34  IKSLPNDLLTEVLAKVATSSYIDLIQAKLATKHFLEASNDRYIFQHASLGNFRNLLWN-N 93
           + SLP DLL E+ +    SS   +   +L +K F    +++Y+F   SL     L W+ N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 94  SPKFWSFMETCNNSENPESLYRKGMLEFFTHCKEASGMAYLKRSAQKGYVDACYVFGVIL 153
           S K   F+E C  S NPE+L++KG + +F    +  G+ YL  +A+KG  +A YV+GVIL
Sbjct: 84  SAK---FIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 143

Query: 154 --YASNLKDEGLEFLKNNEVKL----GNKMIECRQRVKEFVSYIWIKNKISLSEGDSSY- 213
                  K +G E L +   +L     N+++E R ++++     W  +   + +  ++Y 
Sbjct: 144 ICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQLKTAYV 203

Query: 214 GRKCDKNINCRV 218
             KC  +   R+
Sbjct: 204 SEKCKCDCKTRM 212

[Close]

BLAST of CsGy1G004240 vs. ExPASy Swiss-Prot
Match: Q1PEW8 (F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-04
Identity = 36/142 (25.35%), Postives = 67/142 (47.18%), Query Frame = 0


Query: 34  IKSLPNDLLTEVLAKVATSSYIDLIQAKLATKHFLEASNDRYIFQHASLGNFRNLLWNNS 93
           +++LP DLL E++AK+   S  D     L+ K    ++ND  + +  +L      L    
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLA-----LLVKK 70

Query: 94  P----KFWSFMETCNNSENPESLYRKGMLEFFT--HCKEASGMAYLKRSAQKGYVDACYV 153
           P    K    M+ C  + NP++ Y KG++ +F   HC     + ++  +A  G  +A Y+
Sbjct: 71  PLSCRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYM 130

Query: 154 FGVILYASNLKDEGLEFLKNNE 170
           + ++L      +EG  ++   E
Sbjct: 131 YAMLLLCRGRTEEGKTYMSQLE 145

[Close]

BLAST of CsGy1G004240 vs. NCBI nr
Match: XP_004137554.1 (putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical protein Csa_013173 [Cucumis sativus])

HSP 1 Score: 530 bits (1366), Expect = 3.98e-190
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MTTNQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQA 60
           MTTNQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQA
Sbjct: 1   MTTNQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQA 60

Query: 61  KLATKHFLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEF 120
           KLATKHFLEASNDRYIFQH SLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEF
Sbjct: 61  KLATKHFLEASNDRYIFQHVSLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEF 120

Query: 121 FTHCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECR 180
           FTHCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECR
Sbjct: 121 FTHCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECR 180

Query: 181 QRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEE 240
           QRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEE
Sbjct: 181 QRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEE 240

Query: 241 CKWNNEVLRFCKMLRTGRFS 260
           CKWNNEVLRFCKMLRTGRFS
Sbjct: 241 CKWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of CsGy1G004240 vs. NCBI nr
Match: XP_008453691.1 (PREDICTED: putative F-box protein At1g67623 [Cucumis melo])

HSP 1 Score: 418 bits (1075), Expect = 8.28e-146
Identity = 203/257 (78.99%), Postives = 220/257 (85.60%), Query Frame = 0


Query: 4   NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63
           N PK  S+   T ISR T+KN+  VLSPTVIKSLPNDLLTEVLAKVA SSY+DL+QAKLA
Sbjct: 3   NHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAKLA 62

Query: 64  TKHFLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTH 123
           TK FLEAS DRYIFQH SLGNF N LWNNSP+FWSF+ETCNN+ENPESLYRKGMLEFFTH
Sbjct: 63  TKQFLEASKDRYIFQHVSLGNFENHLWNNSPEFWSFIETCNNNENPESLYRKGMLEFFTH 122

Query: 124 CKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRV 183
           CKEASG+AYLK SAQKGYVDACYV  VILYAS  KDEG EFLKN+E KL NKM ECR RV
Sbjct: 123 CKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAECRWRV 182

Query: 184 KEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEECKW 243
           K FVSY+WIKN+IS S G+    RKCDKNINCRVNE+ N WD KDEDDYYG+YTCE+CKW
Sbjct: 183 KRFVSYLWIKNRIS-SSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEKCKW 242

Query: 244 NNEVLRFCKMLRTGRFS 260
           NNEV RFCKMLRTGR+S
Sbjct: 243 NNEVFRFCKMLRTGRYS 258

[Close]

BLAST of CsGy1G004240 vs. NCBI nr
Match: XP_038891683.1 (putative F-box protein At1g67623 [Benincasa hispida])

HSP 1 Score: 354 bits (909), Expect = 7.64e-121
Identity = 169/233 (72.53%), Postives = 195/233 (83.69%), Query Frame = 0


Query: 30  SPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKHFLEASNDRYIFQHASLGNFRNLL 89
           SP+VIKSLPNDLL EVLAKVA SSY DL+QAKLATK FLE SN+ YIF+H SLGNF  LL
Sbjct: 6   SPSVIKSLPNDLLIEVLAKVAASSYTDLVQAKLATKDFLEVSNEGYIFRHVSLGNFSKLL 65

Query: 90  WNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKEASGMAYLKRSAQKGYVDACYVFG 149
           WNNSP+FWS +ETCNN+ENPESLYRKGMLEFFTHC+EASG+ YLKRSA+K Y+DACYV+G
Sbjct: 66  WNNSPEFWSLIETCNNNENPESLYRKGMLEFFTHCREASGLGYLKRSAEKDYMDACYVYG 125

Query: 150 VILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEFVSYIWIKNKISLSEGDSSYGRKC 209
           V+LYA+NLK+EGL+FL+N E KLGNKM ECR+RVKEFV  +WIKNK+SLSE +    R C
Sbjct: 126 VVLYATNLKEEGLQFLRNCEAKLGNKMSECRRRVKEFVWCLWIKNKVSLSEKEFGGRRYC 185

Query: 210 DKNI--NCRVNEKINVWDSKDEDDYYGKYTCEECKWNNEVLRFCKMLRTGRFS 260
              I  NC +NEK N WD KDEDD+YG++TCEECKW  EV RFC MLRTG + 
Sbjct: 186 SNVIKNNCLINEKRNGWDWKDEDDHYGEHTCEECKWKGEVSRFCNMLRTGAYG 238

[Close]

BLAST of CsGy1G004240 vs. NCBI nr
Match: XP_023549492.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344 bits (883), Expect = 1.83e-116
Identity = 170/256 (66.41%), Postives = 203/256 (79.30%), Query Frame = 0


Query: 7   KRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKH 66
           KR S AL +QISR T+  ++   SP  I+SLPNDLL EVLAKVA SS+ DL+QAKLATK 
Sbjct: 6   KRKSQALGSQISRKTKTARLSA-SPPTIESLPNDLLIEVLAKVAASSFTDLVQAKLATKK 65

Query: 67  FLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKE 126
           FLEASN  YIFQHASL NF+ LLWNNS +FWSFME CNN+ NPE+LYRKGMLEFFTHC+E
Sbjct: 66  FLEASNHNYIFQHASLENFQKLLWNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCRE 125

Query: 127 ASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEF 186
           ASGM YLK SAQKGY DACYV+G+ILY ++++DEG++FLK  E KLG K++ECR+RVKEF
Sbjct: 126 ASGMTYLKLSAQKGYPDACYVYGIILYTTSMEDEGVKFLKICEAKLGFKLVECRRRVKEF 185

Query: 187 VSYIWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWN 246
           V Y+W+KNKIS+ + DSS  R C+  I   C+ N +   WD  DEDDYYG++TCE CKWN
Sbjct: 186 VRYLWVKNKISVPKKDSSDRRGCESVIKNCCKKNVRRIGWDWNDEDDYYGEHTCEACKWN 245

Query: 247 NEVLRFCKMLRTGRFS 260
            EVLRFC MLRTG + 
Sbjct: 246 GEVLRFCNMLRTGSYD 260

[Close]

BLAST of CsGy1G004240 vs. NCBI nr
Match: XP_023549584.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (876), Expect = 1.85e-115
Identity = 169/256 (66.02%), Postives = 202/256 (78.91%), Query Frame = 0


Query: 7   KRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKH 66
           KR S ALD+QISR T+  + +   PT I+SLPNDLL EVLAKVA  S+ DL+QAKLATK 
Sbjct: 6   KRKSQALDSQISRTTKMARFNDFPPT-IESLPNDLLIEVLAKVAAFSFTDLVQAKLATKE 65

Query: 67  FLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKE 126
           FLEAS+  YIFQHASL NF+ LLWNN+P+FWSFME CNN+ NPE+LY KGMLEFFTHC+E
Sbjct: 66  FLEASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYHKGMLEFFTHCRE 125

Query: 127 ASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEF 186
           ASGMAYLK SAQKGY +ACYV+G+ILYA++L+DEG++FLK  E KLG K+ ECR+RVKEF
Sbjct: 126 ASGMAYLKLSAQKGYPEACYVYGIILYAASLEDEGVKFLKICEAKLGFKLAECRRRVKEF 185

Query: 187 VSYIWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWN 246
           V Y+W+KNKISL E DSS  R C+  +   C+ N +   WD  DEDDYYG++ CE CKWN
Sbjct: 186 VRYLWVKNKISLPEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHMCEACKWN 245

Query: 247 NEVLRFCKMLRTGRFS 260
            EV RFC MLRTG + 
Sbjct: 246 EEVSRFCNMLRTGSYD 260

[Close]

BLAST of CsGy1G004240 vs. ExPASy TrEMBL
Match: A0A0A0LS96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 530 bits (1366), Expect = 1.93e-190
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MTTNQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQA 60
           MTTNQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQA
Sbjct: 1   MTTNQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQA 60

Query: 61  KLATKHFLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEF 120
           KLATKHFLEASNDRYIFQH SLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEF
Sbjct: 61  KLATKHFLEASNDRYIFQHVSLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEF 120

Query: 121 FTHCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECR 180
           FTHCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECR
Sbjct: 121 FTHCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECR 180

Query: 181 QRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEE 240
           QRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEE
Sbjct: 181 QRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEE 240

Query: 241 CKWNNEVLRFCKMLRTGRFS 260
           CKWNNEVLRFCKMLRTGRFS
Sbjct: 241 CKWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of CsGy1G004240 vs. ExPASy TrEMBL
Match: A0A1S3BXN2 (putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 4.01e-146
Identity = 203/257 (78.99%), Postives = 220/257 (85.60%), Query Frame = 0


Query: 4   NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63
           N PK  S+   T ISR T+KN+  VLSPTVIKSLPNDLLTEVLAKVA SSY+DL+QAKLA
Sbjct: 3   NHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAKLA 62

Query: 64  TKHFLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTH 123
           TK FLEAS DRYIFQH SLGNF N LWNNSP+FWSF+ETCNN+ENPESLYRKGMLEFFTH
Sbjct: 63  TKQFLEASKDRYIFQHVSLGNFENHLWNNSPEFWSFIETCNNNENPESLYRKGMLEFFTH 122

Query: 124 CKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRV 183
           CKEASG+AYLK SAQKGYVDACYV  VILYAS  KDEG EFLKN+E KL NKM ECR RV
Sbjct: 123 CKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAECRWRV 182

Query: 184 KEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEECKW 243
           K FVSY+WIKN+IS S G+    RKCDKNINCRVNE+ N WD KDEDDYYG+YTCE+CKW
Sbjct: 183 KRFVSYLWIKNRIS-SSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEKCKW 242

Query: 244 NNEVLRFCKMLRTGRFS 260
           NNEV RFCKMLRTGR+S
Sbjct: 243 NNEVFRFCKMLRTGRYS 258

[Close]

BLAST of CsGy1G004240 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 2.28e-112
Identity = 166/256 (64.84%), Postives = 200/256 (78.12%), Query Frame = 0


Query: 7   KRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKH 66
           KR S AL +QISR T+  ++   SP  I+SLPNDLL E+LAKVA SSY DL+QAKLATK 
Sbjct: 6   KRKSQALGSQISRKTKTARLSA-SPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKK 65

Query: 67  FLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKE 126
           FLEAS+  YIFQHASL NF  LLWNNS +FWSFME CNN+ NPE+LYRKGMLEFFTHC+E
Sbjct: 66  FLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCRE 125

Query: 127 ASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEF 186
           ASGM YLK SAQKGY +ACYV+G+ILYA++++DEG++FLK  E KLG K+ ECR+RVKEF
Sbjct: 126 ASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRVKEF 185

Query: 187 VSYIWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWN 246
           V ++W+KNKIS+ E  S+  R C+  I   C+ N +   WD  DED+YYG+ TCE CKWN
Sbjct: 186 VRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWN 245

Query: 247 NEVLRFCKMLRTGRFS 260
            EVLRFC MLRTG + 
Sbjct: 246 GEVLRFCNMLRTGSYD 260

[Close]

BLAST of CsGy1G004240 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 330 bits (846), Expect = 3.75e-111
Identity = 164/256 (64.06%), Postives = 199/256 (77.73%), Query Frame = 0


Query: 7   KRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKH 66
           KR S +L + ISR T+  ++   SP  I+SLPNDLL E+LAKVA SSY DL+QAKLATK 
Sbjct: 6   KRKSQSLGSHISRKTKTARLSA-SPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKK 65

Query: 67  FLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKE 126
           FLEAS+  YIFQHASL NF  LLWNNS +FWSFME CNN+ NPE+LYRKGMLEFFTHC+E
Sbjct: 66  FLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCRE 125

Query: 127 ASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEF 186
           ASGM YLK SAQKGY +ACYV+G+ILYA++++DEG++FLK  E KLG K+ ECR+RVKEF
Sbjct: 126 ASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRVKEF 185

Query: 187 VSYIWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWN 246
           V ++W+KNKIS+ E  S+  R C+  I   C+ N +   WD  DED+YYG+ TCE CKWN
Sbjct: 186 VRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWN 245

Query: 247 NEVLRFCKMLRTGRFS 260
            EVLRFC MLRTG + 
Sbjct: 246 GEVLRFCNMLRTGSYD 260

[Close]

BLAST of CsGy1G004240 vs. ExPASy TrEMBL
Match: A0A6J1GZQ6 (F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 SV=1)

HSP 1 Score: 328 bits (842), Expect = 1.52e-110
Identity = 166/256 (64.84%), Postives = 197/256 (76.95%), Query Frame = 0


Query: 7   KRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKH 66
           KR S AL +QIS   +  +    SP  I+SLPNDLL EVLAKVA SS+ DL+ AKLATK 
Sbjct: 6   KRKSQALRSQISGTIKMARFSA-SPPPIESLPNDLLIEVLAKVAASSFTDLVHAKLATKK 65

Query: 67  FLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKE 126
           FLEAS+  YIFQHASL NF  LLWNNS +FWSFME CNN+ NPE+LYRKGMLEFFTHC+E
Sbjct: 66  FLEASSHNYIFQHASLENFHKLLWNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCRE 125

Query: 127 ASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEF 186
           ASGMAYLK SAQKGY DACYV+G+ILYA++++DEG++FLK  E KLG K+ +CR RVKEF
Sbjct: 126 ASGMAYLKLSAQKGYPDACYVYGIILYATSMEDEGVKFLKICEAKLGFKLAKCRGRVKEF 185

Query: 187 VSYIWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWN 246
           + Y+W+KNKI + E DSS  R C+  I   CR N +    D  DEDDYYG++TCE CKWN
Sbjct: 186 IYYLWVKNKIYVLENDSSNRRGCESVIKNCCRKNVRRIGCDWNDEDDYYGEHTCEACKWN 245

Query: 247 NEVLRFCKMLRTGRFS 260
            EVLRFC MLRTG ++
Sbjct: 246 GEVLRFCNMLRTGSYN 260

[Close]

BLAST of CsGy1G004240 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 88.6 bits (218), Expect = 8.2e-18
Identity = 58/192 (30.21%), Postives = 98/192 (51.04%), Query Frame = 0


Query: 34  IKSLPNDLLTEVLAKVATSSYIDLIQAKLATKHFLEASNDRYIFQHASLGNFRNLLWN-N 93
           + SLP DLL E+ +    SS   +   +L +K F    +++Y+F   SL     L W+ N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 94  SPKFWSFMETCNNSENPESLYRKGMLEFFTHCKEASGMAYLKRSAQKGYVDACYVFGVIL 153
           S K   F+E C  S NPE+L++KG + +F    +  G+ YL  +A+KG  +A YV+GVIL
Sbjct: 84  SAK---FIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 143

Query: 154 --YASNLKDEGLEFLKNNEVKL----GNKMIECRQRVKEFVSYIWIKNKISLSEGDSSY- 213
                  K +G E L +   +L     N+++E R ++++     W  +   + +  ++Y 
Sbjct: 144 ICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQLKTAYV 203

Query: 214 GRKCDKNINCRV 218
             KC  +   R+
Sbjct: 204 SEKCKCDCKTRM 212

[Close]

BLAST of CsGy1G004240 vs. TAIR 10
Match: AT1G74875.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 5.8e-16
Identity = 60/221 (27.15%), Postives = 106/221 (47.96%), Query Frame = 0


Query: 45  VLAKVATSSYIDLIQAKLATKHFLEASNDRYIFQHASLGNFRNLLWNNSPKFWSFMETCN 104
           ++  V +SS  +    +L +K F   SNDRYI Q  SL     L W N  KF +F + C 
Sbjct: 23  LVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLLPWRNRKKFHNFFKRCR 82

Query: 105 NSENPESLYRKGMLEFF---THCKEAS-GMAYLKRSAQKGYVDACYVFGVIL--YASNLK 164
            S N E++YRKG++++F   +H ++   G+ ++ ++A  G  +A YV+G+IL       K
Sbjct: 83  KSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLILICLGGKTK 142

Query: 165 DEGLEFLKN--NEVKLGNKMIECRQRVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCR 224
             G + L +    + L N + E  ++ +  +  +W   +  +     SY R+     NC 
Sbjct: 143 QNGFKILSSLRKPLMLSNTIKE-MEKHRTHIRNMWWWGEPMMRHLQKSYVRE-----NCN 202

Query: 225 VNEKINVWDS-------KDEDDYYGKYTCEECKWNNEVLRF 251
            + +  ++ +        ++DD      CE C  ++EV  F
Sbjct: 203 CDGRTEIFPNYCFRHRFGEDDDMLTSSACEICLCHHEVKLF 237

[Close]

BLAST of CsGy1G004240 vs. TAIR 10
Match: AT2G35280.1 (F-box family protein )

HSP 1 Score: 48.9 bits (115), Expect = 7.2e-06
Identity = 36/142 (25.35%), Postives = 67/142 (47.18%), Query Frame = 0


Query: 34  IKSLPNDLLTEVLAKVATSSYIDLIQAKLATKHFLEASNDRYIFQHASLGNFRNLLWNNS 93
           +++LP DLL E++AK+   S  D     L+ K    ++ND  + +  +L      L    
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLA-----LLVKK 70

Query: 94  P----KFWSFMETCNNSENPESLYRKGMLEFFT--HCKEASGMAYLKRSAQKGYVDACYV 153
           P    K    M+ C  + NP++ Y KG++ +F   HC     + ++  +A  G  +A Y+
Sbjct: 71  PLSCRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYM 130

Query: 154 FGVILYASNLKDEGLEFLKNNE 170
           + ++L      +EG  ++   E
Sbjct: 131 YAMLLLCRGRTEEGKTYMSQLE 145

The following BLAST results are available for this feature:

BLAST of CsGy1G004240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXC7	1.1e-16	30.21	Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE...	[more]
Q1PEW8	1.0e-04	25.35	F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1	[more]

BLAST of CsGy1G004240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137554.1	3.98e-190	99.62	putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical prot...	[more]
XP_008453691.1	8.28e-146	78.99	PREDICTED: putative F-box protein At1g67623 [Cucumis melo]	[more]
XP_038891683.1	7.64e-121	72.53	putative F-box protein At1g67623 [Benincasa hispida]	[more]
XP_023549492.1	1.83e-116	66.41	putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]	[more]
XP_023549584.1	1.85e-115	66.02	putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G004240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS96	1.93e-190	99.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1	[more]
A0A1S3BXN2	4.01e-146	78.99	putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV...	[more]
A0A6J1JRX4	2.28e-112	64.84	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=...	[more]
A0A6J1JRV1	3.75e-111	64.06	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=...	[more]
A0A6J1GZQ6	1.52e-110	64.84	F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 ...	[more]

BLAST of CsGy1G004240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67623.1	8.2e-18	30.21	F-box family protein	[more]
AT1G74875.1	5.8e-16	27.15	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G35280.1	7.2e-06	25.35	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33784:SF10	OS05G0482100 PROTEIN	coord: 34..243
IPR040338	Putative F-box protein At1g67623-like	PANTHER	PTHR33784	OS05G0482100 PROTEIN	coord: 34..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G004240.2	CsGy1G004240.2	mRNA