CsGy1G003780 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G003780
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	VQ motif-containing protein 20
Location	Gy14Chr1: 2380325 .. 2381065 (+)
RNA-Seq Expression	CsGy1G003780
Synteny	CsGy1G003780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCTCAACAACAGCAACAACAAATCCATGGAAAAATGGATAATCAGATCACCAACAATGGGAATAATAAACCAATATTGTGTCCACCGCCATTGAAGATCAATAAGGATTCTCATTTGATTCGAAAAACTTCCTCTTCTTCAAATACTTCTTCCCCTTCTTCCTCTTCATCTTCCACCACCTCTCTTGCCAATGGGGTCGCTGCTGCTGCTGCGAAGCCACCACCTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAATCATTCACACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATCATGATCATGAAGCTTCTACCACGAAGCTGGCTACAACGAAATCCGCCGTGGATGAGAATAATAATAATAATAATAATAATAATAAAGGTTCTAAAGCTGCTGTTGTGAATGATGATAATGAATCGTCGTCCGTTGTGACGACGGATGAAAATTGTTGCGGCGGCGGTGGAAGCGGTTTGATGGAAGTTGGTCAGGTTAATTCGTGTTTTGGACCGGCGATTTTTGAGCCGCCGCCACCTCCGCCACAACTGGCGAATTCTTACCTGACGAATATACCCATTTATACGCCGAATTCGACGGAGTTCTTGTGCACGAATCAACCAATTTTTAACTATGATGATTCTTTGCTTTTTGGTGGCAACAGATCAGTTAATGATTTCTGCGAATACAGTGAATTTTAG

mRNA sequence

ATGAGTCCTCAACAACAGCAACAACAAATCCATGGAAAAATGGATAATCAGATCACCAACAATGGGAATAATAAACCAATATTGTGTCCACCGCCATTGAAGATCAATAAGGATTCTCATTTGATTCGAAAAACTTCCTCTTCTTCAAATACTTCTTCCCCTTCTTCCTCTTCATCTTCCACCACCTCTCTTGCCAATGGGGTCGCTGCTGCTGCTGCGAAGCCACCACCTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAATCATTCACACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATCATGATCATGAAGCTTCTACCACGAAGCTGGCTACAACGAAATCCGCCGTGGATGAGAATAATAATAATAATAATAATAATAATAAAGGTTCTAAAGCTGCTGTTGTGAATGATGATAATGAATCGTCGTCCGTTGTGACGACGGATGAAAATTGTTGCGGCGGCGGTGGAAGCGGTTTGATGGAAGTTGGTCAGGTTAATTCGTGTTTTGGACCGGCGATTTTTGAGCCGCCGCCACCTCCGCCACAACTGGCGAATTCTTACCTGACGAATATACCCATTTATACGCCGAATTCGACGGAGTTCTTGTGCACGAATCAACCAATTTTTAACTATGATGATTCTTTGCTTTTTGGTGGCAACAGATCAGTTAATGATTTCTGCGAATACAGTGAATTTTAG

Coding sequence (CDS)

ATGAGTCCTCAACAACAGCAACAACAAATCCATGGAAAAATGGATAATCAGATCACCAACAATGGGAATAATAAACCAATATTGTGTCCACCGCCATTGAAGATCAATAAGGATTCTCATTTGATTCGAAAAACTTCCTCTTCTTCAAATACTTCTTCCCCTTCTTCCTCTTCATCTTCCACCACCTCTCTTGCCAATGGGGTCGCTGCTGCTGCTGCGAAGCCACCACCTCAACGACATCCGGTGATTATATACACACATTCTCCCAAAATCATTCACACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATCATGATCATGAAGCTTCTACCACGAAGCTGGCTACAACGAAATCCGCCGTGGATGAGAATAATAATAATAATAATAATAATAATAAAGGTTCTAAAGCTGCTGTTGTGAATGATGATAATGAATCGTCGTCCGTTGTGACGACGGATGAAAATTGTTGCGGCGGCGGTGGAAGCGGTTTGATGGAAGTTGGTCAGGTTAATTCGTGTTTTGGACCGGCGATTTTTGAGCCGCCGCCACCTCCGCCACAACTGGCGAATTCTTACCTGACGAATATACCCATTTATACGCCGAATTCGACGGAGTTCTTGTGCACGAATCAACCAATTTTTAACTATGATGATTCTTTGCTTTTTGGTGGCAACAGATCAGTTAATGATTTCTGCGAATACAGTGAATTTTAG

Protein sequence

MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSSTTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEASTTKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVNSCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNRSVNDFCEYSEF*

Homology

[Close]

BLAST of CsGy1G003780 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-26
Identity = 106/272 (38.97%), Postives = 133/272 (48.90%), Query Frame = 0


Query: 11  HGKMDNQITNNG---NNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSSTTSLANG 70
           H K +    N+G      P   PP LK+NKDSH+I+K        SPSS SS        
Sbjct: 21  HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK------PPSPSSFSS-------- 80

Query: 71  VAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHD----------HE 130
               AAKP   RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD D            
Sbjct: 81  ----AAKP---RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGV 140

Query: 131 ASTTKLATTKSAVDENNNNN-----NN---------NNKG--SKAAVVNDDNESSSVVTT 190
             +     ++  VD  NN N     NN         N KG      ++++D+ESSSV+TT
Sbjct: 141 VKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSESSSVITT 200

Query: 191 DENCCGGGGSGLMEVGQVNSCF----------GPAIFEPPPPPPQLAN-------SYLTN 235
           +EN        + E GQVNS             P    PPPPPP + +       +YL  
Sbjct: 201 EEN--------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINYGAYLPT 260

[Close]

BLAST of CsGy1G003780 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.3e-05
Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 30  PPPLKINKDSHLIRKTSSSSNTSSPSSSSSSTTSLANGVAAAAAKPPPQRHPVIIYTHSP 89
           P  LK+  +SH I+KTSS  +   P   +S                     PVIIY HSP
Sbjct: 14  PSSLKLAGESHTIKKTSSCKSKPRPHGRAS---------------------PVIIYAHSP 73

Query: 90  KIIHTHPRDFMALVQKLTGMSR--SDHDHEASTTKLATTKSAVDEN 134
           K+IHT   DFMALVQ+LTG+      +  E+S++ +    +  D+N
Sbjct: 74  KVIHTRAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVNVGDDN 98

[Close]

BLAST of CsGy1G003780 vs. NCBI nr
Match: XP_004138347.3 (VQ motif-containing protein 20 [Cucumis sativus])

HSP 1 Score: 478 bits (1229), Expect = 1.04e-169
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60
           MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS
Sbjct: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60

Query: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST 120
           TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST
Sbjct: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST 120

Query: 121 TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVN 180
           TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVN
Sbjct: 121 TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVN 180

Query: 181 SCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNRSVNDF 240
           SCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNRSVNDF
Sbjct: 181 SCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNRSVNDF 240

Query: 241 CEYSEF 246
           CEYSEF
Sbjct: 241 CEYSEF 246

[Close]

BLAST of CsGy1G003780 vs. NCBI nr
Match: KGN63830.2 (hypothetical protein Csa_013231 [Cucumis sativus])

HSP 1 Score: 409 bits (1050), Expect = 3.67e-139
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60
           MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS
Sbjct: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60

Query: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST 120
           TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST
Sbjct: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST 120

Query: 121 TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVN 180
           TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVN
Sbjct: 121 TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVN 180

Query: 181 SCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEF 215
           SCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEF
Sbjct: 181 SCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEF 215

[Close]

BLAST of CsGy1G003780 vs. NCBI nr
Match: XP_008453685.1 (PREDICTED: VQ motif-containing protein 20 [Cucumis melo])

HSP 1 Score: 376 bits (966), Expect = 1.19e-129
Identity = 219/255 (85.88%), Postives = 222/255 (87.06%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSN--TSSPSSSS 60
           MSPQQQ   IHGK DNQI NNGN KPILCPPPLKINKDSHLIRKTSSSSN  TSSPSSSS
Sbjct: 1   MSPQQQ---IHGKRDNQINNNGN-KPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSS 60

Query: 61  SSTTSLANGVAAAAAKP--PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDH 120
           SSTTSL NGVAAAAA    P QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSD DH
Sbjct: 61  SSTTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSD-DH 120

Query: 121 EASTTKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGG-SGLME 180
           EAST KLATTK  VDENNNNN    KGSKA VV+DDNESSSVVTTDENCCGGGG SG+ME
Sbjct: 121 EAST-KLATTKPVVDENNNNN----KGSKA-VVSDDNESSSVVTTDENCCGGGGGSGMME 180

Query: 181 VGQVNSCFGPAIFEPPPPPP-----QLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLL 240
           VGQVNSCFGP IFEPPPPPP     QLANSYLTNIPIYTPNS EFLC NQPIFNYDDSLL
Sbjct: 181 VGQVNSCFGPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLL 240

Query: 241 FGGNRSVNDFCEYSE 245
           FGGNR VNDFCEYSE
Sbjct: 241 FGGNRVVNDFCEYSE 244

[Close]

BLAST of CsGy1G003780 vs. NCBI nr
Match: XP_038876677.1 (VQ motif-containing protein 20 [Benincasa hispida])

HSP 1 Score: 330 bits (847), Expect = 1.29e-111
Identity = 202/261 (77.39%), Postives = 209/261 (80.08%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQ--ITNNGN---NKPILCPPPLKINKDSHLIRKTSSSSNTSSPS 60
           MSPQ QQQ +HGK DNQ    NNGN   NKP LCPPPLKINKDSHLIRK+SSSSNTSSPS
Sbjct: 1   MSPQPQQQ-LHGKRDNQNQSINNGNGNGNKP-LCPPPLKINKDSHLIRKSSSSSNTSSPS 60

Query: 61  SSSSSTTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHD 120
           SSSSSTTSL NGV       PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD  
Sbjct: 61  SSSSSTTSLVNGVK------PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD- 120

Query: 121 HEASTTKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLME 180
            EAST   ATTKS VDENN       KGSK AVVNDDNESSSVVTTDENCCGGG SG++E
Sbjct: 121 -EAST--KATTKS-VDENN-------KGSKKAVVNDDNESSSVVTTDENCCGGG-SGVVE 180

Query: 181 VGQVNSCFGPAIFEPPPPPP--QLANSYLTNIPIYTPNSTEFLCTNQP-IFNYDDSLLFG 240
            GQVNSCFG AIFEPPPPPP  QLANSYLTNIP+Y PNSTEFLCTNQP  FNYDDSLLFG
Sbjct: 181 GGQVNSCFGAAIFEPPPPPPPPQLANSYLTNIPVYRPNSTEFLCTNQPSFFNYDDSLLFG 240

Query: 241 GNR-------SVNDFCEYSEF 246
            +         +NDFCEYSEF
Sbjct: 241 AHNIPSLSSNGINDFCEYSEF 240

[Close]

BLAST of CsGy1G003780 vs. NCBI nr
Match: KGN62345.1 (hypothetical protein Csa_018596 [Cucumis sativus])

HSP 1 Score: 323 bits (829), Expect = 6.38e-109
Identity = 195/252 (77.38%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60
           MSPQQQQQ IHGK DNQ TNN  NKP+  PP LKINKDSHLIRK+SSSSNTSSPSSSSSS
Sbjct: 1   MSPQQQQQ-IHGKRDNQ-TNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSS 60

Query: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST 120
           TTSL NGV   AA  PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD   EAST
Sbjct: 61  TTSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD--EAST 120

Query: 121 TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGS-GLMEVGQV 180
              AT KS VDENN       K SK  VVNDDNESSSVVTTDENCCGG GS G +E GQV
Sbjct: 121 --KATAKSVVDENN-------KASK--VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQV 180

Query: 181 NSCFGPAIFEPPPPPP--QLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGN--- 240
           NSCFGPAIFEPPPPPP  QLA+SYL+NIP+Y PNSTEFLC NQPIFNYDDSLLFG N   
Sbjct: 181 NSCFGPAIFEPPPPPPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPS 237

Query: 241 RSVNDFCEYSEF 246
            S N   ++SEF
Sbjct: 241 LSSNGVSDFSEF 237

[Close]

BLAST of CsGy1G003780 vs. ExPASy TrEMBL
Match: A0A0A0LPK7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 1.14e-138
Identity = 210/246 (85.37%), Postives = 211/246 (85.77%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60
           MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS
Sbjct: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60

Query: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST 120
           TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+           
Sbjct: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGICCC-------- 120

Query: 121 TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVN 180
                                   KAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVN
Sbjct: 121 ------------------------KAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQVN 180

Query: 181 SCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNRSVNDF 240
           SCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNRSVNDF
Sbjct: 181 SCFGPAIFEPPPPPPQLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNRSVNDF 214

Query: 241 CEYSEF 246
           CEYSEF
Sbjct: 241 CEYSEF 214

[Close]

BLAST of CsGy1G003780 vs. ExPASy TrEMBL
Match: A0A1S3BXM8 (VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1)

HSP 1 Score: 376 bits (966), Expect = 5.77e-130
Identity = 219/255 (85.88%), Postives = 222/255 (87.06%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSN--TSSPSSSS 60
           MSPQQQ   IHGK DNQI NNGN KPILCPPPLKINKDSHLIRKTSSSSN  TSSPSSSS
Sbjct: 1   MSPQQQ---IHGKRDNQINNNGN-KPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSS 60

Query: 61  SSTTSLANGVAAAAAKP--PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDH 120
           SSTTSL NGVAAAAA    P QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSD DH
Sbjct: 61  SSTTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSD-DH 120

Query: 121 EASTTKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGG-SGLME 180
           EAST KLATTK  VDENNNNN    KGSKA VV+DDNESSSVVTTDENCCGGGG SG+ME
Sbjct: 121 EAST-KLATTKPVVDENNNNN----KGSKA-VVSDDNESSSVVTTDENCCGGGGGSGMME 180

Query: 181 VGQVNSCFGPAIFEPPPPPP-----QLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLL 240
           VGQVNSCFGP IFEPPPPPP     QLANSYLTNIPIYTPNS EFLC NQPIFNYDDSLL
Sbjct: 181 VGQVNSCFGPVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLL 240

Query: 241 FGGNRSVNDFCEYSE 245
           FGGNR VNDFCEYSE
Sbjct: 241 FGGNRVVNDFCEYSE 244

[Close]

BLAST of CsGy1G003780 vs. ExPASy TrEMBL
Match: A0A0A0LKA6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=1)

HSP 1 Score: 323 bits (829), Expect = 3.09e-109
Identity = 195/252 (77.38%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60
           MSPQQQQQ IHGK DNQ TNN  NKP+  PP LKINKDSHLIRK+SSSSNTSSPSSSSSS
Sbjct: 1   MSPQQQQQ-IHGKRDNQ-TNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSS 60

Query: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST 120
           TTSL NGV   AA  PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD   EAST
Sbjct: 61  TTSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD--EAST 120

Query: 121 TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGS-GLMEVGQV 180
              AT KS VDENN       K SK  VVNDDNESSSVVTTDENCCGG GS G +E GQV
Sbjct: 121 --KATAKSVVDENN-------KASK--VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQV 180

Query: 181 NSCFGPAIFEPPPPPP--QLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGN--- 240
           NSCFGPAIFEPPPPPP  QLA+SYL+NIP+Y PNSTEFLC NQPIFNYDDSLLFG N   
Sbjct: 181 NSCFGPAIFEPPPPPPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPS 237

Query: 241 RSVNDFCEYSEF 246
            S N   ++SEF
Sbjct: 241 LSSNGVSDFSEF 237

[Close]

BLAST of CsGy1G003780 vs. ExPASy TrEMBL
Match: A0A5A7V0G0 (VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001740 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 6.12e-107
Identity = 195/255 (76.47%), Postives = 203/255 (79.61%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60
           MSPQ QQQQIHGK DNQI NN N KP L PP LKINKDSHLIRK+SSSSNTSSPSSSSSS
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNAN-KP-LSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSS 60

Query: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST 120
           TTSL NGV  A AKPP QRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD   EAST
Sbjct: 61  TTSLVNGVPTAVAKPP-QRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD--EAST 120

Query: 121 TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGS-GLMEVGQV 180
              AT KS VDENN       K SK  VVNDDNESSSV+TTDENCC G GS G +E GQV
Sbjct: 121 --KATAKS-VDENN-------KVSK--VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQV 180

Query: 181 NSCFGPAIFEPPPPPP----QLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNR 240
           NSCFGPA FEPPPPPP    QLANSYLTN+P+Y PNSTEFLC NQPIFNYDDSLLFGG+ 
Sbjct: 181 NSCFGPASFEPPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSN 238

Query: 241 ----SVNDFCEYSEF 246
               S N   ++SEF
Sbjct: 241 IPSLSSNGISDFSEF 238

[Close]

BLAST of CsGy1G003780 vs. ExPASy TrEMBL
Match: A0A1S3BCI6 (VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4 SV=1)

HSP 1 Score: 317 bits (813), Expect = 8.68e-107
Identity = 195/255 (76.47%), Postives = 203/255 (79.61%), Query Frame = 0


Query: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60
           MSPQ QQQQIHGK DNQI NN N KP L PP LKINKDSHLIRK+SSSSNTSSPSSSSSS
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNAN-KP-LSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSS 60

Query: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEAST 120
           TTSL NGV  A AKPP QRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD   EAST
Sbjct: 61  TTSLVNGVPTAVAKPP-QRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD--EAST 120

Query: 121 TKLATTKSAVDENNNNNNNNNKGSKAAVVNDDNESSSVVTTDENCCGGGGS-GLMEVGQV 180
              AT KS VDENN       K SK  VVNDDNESSSV+TTDENCC G GS G +E GQV
Sbjct: 121 --KATAKS-VDENN-------KISK--VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQV 180

Query: 181 NSCFGPAIFEPPPPPP----QLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGNR 240
           NSCFGPA FEPPPPPP    QLANSYLTN+P+Y PNSTEFLC NQPIFNYDDSLLFGG+ 
Sbjct: 181 NSCFGPASFEPPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSN 238

Query: 241 ----SVNDFCEYSEF 246
               S N   ++SEF
Sbjct: 241 IPSLSSNGISDFSEF 238

[Close]

BLAST of CsGy1G003780 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27
Identity = 106/272 (38.97%), Postives = 133/272 (48.90%), Query Frame = 0


Query: 11  HGKMDNQITNNG---NNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSSTTSLANG 70
           H K +    N+G      P   PP LK+NKDSH+I+K        SPSS SS        
Sbjct: 21  HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK------PPSPSSFSS-------- 80

Query: 71  VAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHD----------HE 130
               AAKP   RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD D            
Sbjct: 81  ----AAKP---RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGV 140

Query: 131 ASTTKLATTKSAVDENNNNN-----NN---------NNKG--SKAAVVNDDNESSSVVTT 190
             +     ++  VD  NN N     NN         N KG      ++++D+ESSSV+TT
Sbjct: 141 VKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSESSSVITT 200

Query: 191 DENCCGGGGSGLMEVGQVNSCF----------GPAIFEPPPPPPQLAN-------SYLTN 235
           +EN        + E GQVNS             P    PPPPPP + +       +YL  
Sbjct: 201 EEN--------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINYGAYLPT 260

[Close]

BLAST of CsGy1G003780 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 30  PPPLKINKDSHLIRKTSSSSNTSSPSSSSSSTTSLANGVAAAAAKPPPQRHPVIIYTHSP 89
           P  LK+  +SH I+KTSS  +   P   +S                     PVIIY HSP
Sbjct: 14  PSSLKLAGESHTIKKTSSCKSKPRPHGRAS---------------------PVIIYAHSP 73

Query: 90  KIIHTHPRDFMALVQKLTGMSR--SDHDHEASTTKLATTKSAVDEN 134
           K+IHT   DFMALVQ+LTG+      +  E+S++ +    +  D+N
Sbjct: 74  KVIHTRAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVNVGDDN 98

The following BLAST results are available for this feature:

BLAST of CsGy1G003780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS54	2.0e-26	38.97	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q9CA36	3.3e-05	35.85	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CsGy1G003780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138347.3	1.04e-169	100.00	VQ motif-containing protein 20 [Cucumis sativus]	[more]
KGN63830.2	3.67e-139	100.00	hypothetical protein Csa_013231 [Cucumis sativus]	[more]
XP_008453685.1	1.19e-129	85.88	PREDICTED: VQ motif-containing protein 20 [Cucumis melo]	[more]
XP_038876677.1	1.29e-111	77.39	VQ motif-containing protein 20 [Benincasa hispida]	[more]
KGN62345.1	6.38e-109	77.38	hypothetical protein Csa_018596 [Cucumis sativus]	[more]

BLAST of CsGy1G003780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPK7	1.14e-138	85.37	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=...	[more]
A0A1S3BXM8	5.77e-130	85.88	VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1	[more]
A0A0A0LKA6	3.09e-109	77.38	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=...	[more]
A0A5A7V0G0	6.12e-107	76.47	VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BCI6	8.68e-107	76.47	VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4...	[more]

BLAST of CsGy1G003780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18360.1	1.4e-27	38.97	VQ motif-containing protein	[more]
AT1G68450.1	2.3e-06	35.85	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 86..110 e-value: 1.7E-11 score: 43.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 1..245
IPR039832	VQ motif-containing protein 20	PANTHER	PTHR33143:SF4	VQ MOTIF-CONTAINING PROTEIN 20	coord: 1..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G003780.1	CsGy1G003780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding