CsGy1G003760 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G003760
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 2364689 .. 2365445 (-)
RNA-Seq ExpressionCsGy1G003760
SyntenyCsGy1G003760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATATTTTCAGGTACTTTACTCTTTCCCTTAAAGGCCTTTGTTTGGTGGCCTGAGATTCCTTACGTGCTTTGGATCTATATGATACTGGTAATGAATTCTCCCAAGTAACTGTGAGGATACTACTAAACATTTAGCTGGATTAAAATATATTTTATGGTACGGCAGTCTTAGGATTATTCATTTAGATCAGAAAGGATCCCTCTTTCCTCTGCCCTTGCAATTCAGCCCGAGTCACCTGGTGGAAACAATTGAAAAACAGAACATTATTATTTAAATCTTCTATCATCTGATTCAACTTCATGTTAAAGAGTTAAACACAATCTGATCCACAGTTCCTCGCTTCTATAACTAAGTCGAATGTCCTCATTTCGGTCCCCATACCAGGTTGAAGGATGTGGAAAATGTAACAATCCCGAACCCAATTTCTGCCTTAGTTGGCCCGAACACTTTCATTGCTGTTTCCCATCGAAAGCTGGGTAATTTACAAGAAGCTCTGGGTCATTTGCTTCAAGTTCAATCCAAAACGGGTATGATTTATTTTCTTCTTTGAAGAATGGAGTAATGGGTTCCTCTAGATTCTGTAGAGACATTATTCTTTTTCTAATCTTTCCTTCTCATTTTTTTCTTTTGTAAATTCAATTCGGATAACTTTTTAGCTCACAAAGTGCAGGAATTATGTATGAATTCAGCCAATATCTGGTTCTATGCCGCTTCCAAATGGGCTCCCTATTTATTAATATATTGTGTATTTGA

mRNA sequence

ATGCATATTTTCAGGTTGAAGGATGTGGAAAATGTAACAATCCCGAACCCAATTTCTGCCTTAGTTGGCCCGAACACTTTCATTGCTGTTTCCCATCGAAAGCTGGGTAATTTACAAGAAGCTCTGGGTCATTTGCTTCAAGTTCAATCCAAAACGGGAATTATGTATGAATTCAGCCAATATCTGGTTCTATGCCGCTTCCAAATGGGCTCCCTATTTATTAATATATTGTGTATTTGA

Coding sequence (CDS)

ATGCATATTTTCAGGTTGAAGGATGTGGAAAATGTAACAATCCCGAACCCAATTTCTGCCTTAGTTGGCCCGAACACTTTCATTGCTGTTTCCCATCGAAAGCTGGGTAATTTACAAGAAGCTCTGGGTCATTTGCTTCAAGTTCAATCCAAAACGGGAATTATGTATGAATTCAGCCAATATCTGGTTCTATGCCGCTTCCAAATGGGCTCCCTATTTATTAATATATTGTGTATTTGA

Protein sequence

MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQYLVLCRFQMGSLFINILCI*
Homology
[Close]
BLAST of CsGy1G003760 vs. NCBI nr
Match: KGN63822.1 (hypothetical protein Csa_013430 [Cucumis sativus])

HSP 1 Score: 159 bits (403), Expect = 3.47e-49
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ 60
          MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ
Sbjct: 1  MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ 60

Query: 61 YLVLCRFQMGSLFINILCI 79
          YLVLCRFQMGSLFINILCI
Sbjct: 61 YLVLCRFQMGSLFINILCI 79

[Close]
BLAST of CsGy1G003760 vs. ExPASy TrEMBL
Match: A0A0A0LSN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023590 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 1.68e-49
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ 60
          MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ
Sbjct: 1  MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ 60

Query: 61 YLVLCRFQMGSLFINILCI 79
          YLVLCRFQMGSLFINILCI
Sbjct: 61 YLVLCRFQMGSLFINILCI 79

The following BLAST results are available for this feature:
BLAST of CsGy1G003760 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G003760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63822.13.47e-49100.00hypothetical protein Csa_013430 [Cucumis sativus][more]
BLAST of CsGy1G003760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSN61.68e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023590 PE=4 SV=1[more]
BLAST of CsGy1G003760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G003760.2CsGy1G003760.2mRNA