CsGy1G003430 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G003430
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	nuclear factor Y, subunit B13
Location	Gy14Chr1: 2159934 .. 2163559 (+)
RNA-Seq Expression	CsGy1G003430
Synteny	CsGy1G003430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAACCACAATAACCTCTGATAAAAATGCATATATCAACAATGCCCTTCCTCCACCACACCACCACCTCCTTCGCCTCCTACGATTCCGATCGTCTTCAATCCCTGGGATCGCCGTCGTCATTTTCCGGTTTTCTCTATTCCGTTTTTCTATTCTCTTCTGGGTCCTCGTAAGTTCCGATCTCCTTCTCTTTTCCTTGCTTCGTTTGTGTTTTATTTTTCCTGAATTTGTTTATGTTTTTATTTCCGCCCTTGGGGTTCTTTTTTCTCTGATTTTTTTTTTCTGGGTTGTATGTATTTCAGTTTTGAAGGTTCGGTATGGAGCCGATGGACATAGTAGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGGTACTTGTAATTTCTGCGGTGTTTTTGTTGTCTGATTTTTTAGGGTTTTTTTCCCTCAGGGTGTAGTGAATTTGATGTGGAGGATTCATGGACTAATACGGGGTTTCTCTTACTTTACAATGATTATTTTAATTTTGGGTTATTTTTTATAAATTCTGAAGAGGAAGTATGGAATTGTGTGTTGAAGTTTATGTCTGGAAAATCTATATTTTGTGAGTTGAGCGATTAGTGGTACCGTTAATTTTCGTTTCGACTGGAGAAGACAACCCTGGGTGCTTATTTTCTCGTTTATTGGATTTTGTTTACTCGGTACGGCTGCATGAGGCGGCAATTTTTGGTGGGAACTTGAAAGTCGATAATTTCAGGAGGAGTTCATGGAAGGGAACTCGTTTCCTGTTTTTCTTTTCTGTCTTTTTCTGTGGGGACAAGCGAGTGACTTGTTTGCTGTACGCCATAACTAAATATTGATGCTCTAGTGTTCATCAGTTCTTACTCTAATGTGTTCACGTTCTGTAAACGTGGATAGATATATTCTTTGGCATCATTCATGTTTTTGCTTTCATCCCACATCTGCTACACGAATTACCAGTCACCCAGTTTACAAAACTTATTATAAGTATACTATGTAAGATGACAGGGTTTTCGAAAACAGTTGGATTTTCTTTTGTACTGGAGTTTCATCTTACTTCGAAATTCTTCCCTTCTTTTTGTTCTTTGCTGCCTTTTAATCGGGTTTGTTTTGTTGTTCTTGTTCAGCTTTCAAGCTAGATGCCTTTCTTTGGAAGAGTAGTTTTGTGGACATTTATGTTCCCAATTGTTTGGAGTTTCTCTACTCCTGTGTCCTTTTTCTTTCAGTTTCATTAGCTTGCATGAATTGGTTCAAACTTTGATATGATGTAATATGGTGACAATAATATGGCACCCTTCCTTTCTTTCATTTTTTTATCGGTGAAAGTTGTTTACATTAAAAAAAAAAAAAAAGACAACCTTCCTTGAACAAACAAGGCAATTGAAGACCATTTAATTGCTTAAGTAACTGCTGAAGTTTGCTTTGGTTTGTTCCTTTGTATGTGGGCGGATTAAAATCTCTTATATTTGTTAGAGGTTAAAACATTGACTGTCAACCCGTTGAGCCATGCATAGGGTAGCATGATGTTTCCCTGGTAGTTTTTTTTAATCATTAAATTTTTTGTTTTTCTTTCCAAATTTTCTTTTTCAGCGACTATGACCAAGATTATCAAAGAGATGTTGCCCCCTGATGTACGGGTTGCAAGAGACGCTCAAGATCTTCTGATTGAGTGTTGTGTAGGTGAGAATATCTTGCCATTTTCTTTGTACATTTTAACATTTTACGTGTTAGCACTTGATGTTGGTTTTCTGTGCTACTGTTAATGACCGTAATGGTTCTATTATTTTTCCAACAATAAGGGGCAGTAGTTGTCTTCAGACACTGTTCTATTTTATTGTGTAGTTGATTTTTTGTACCTTTTTTTTACTATTGTCCTCCCCACATGAGCTATTTAAGGTGGTGGCAGGTTTTCATGACTGATCAATTATCACTTCTTACTCAAGAATTGCACTCTCTTTATTTTGCTGTTCTTGCAGAGTTTATAAACCTTGTATCGTCAGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAGCACGTGCTCAAGGCTCTTGAGGTCTATGAACTATCCAAGTTTCATTTACATTCTTAATAATATAAACGTTTATGTGTTACTTGTTATTATGCTTTAGGATAATACATACTGGCATTTTCTTGTTTACCATCCAGCTCCATGGATTCAAAATTCCCATTTTGTAGAAGTTTTATTCAGTATTGCTTGATAAGGCTGTACAGCTAAAGTACCTGATCCTTGTATGTTAAGTAAATGAATGTTATTCAGTGTAATAAAAATTTGAAGGTCTCAACTAGGACTTACCAATGTACTCCTTGTATGTTTGATCGATGGTTGGCAACCATTCTGATCATGGAATCATTTTAGTGCTCTGCTTTACTTTTTATTTTATGAGAAACCAGGCTTTCATTATGACTACAAGTGATTAATATTTTCTATCTTAATCTATTAATATTTTCAGCACAAAATTTATTTTAAATCTACGGTCTTTTATATATTTGAACTCAGCTTGGGTCAAGGATTAATCTACTCCGCAGAAATCTTAGTTTTCTCCTAATTCACAGTAATGGAGGAGAGACAAATCTCAATATATGTTAGCAATGTCATGTGCAGTTTAATGCCTCCATGTTCCAATTCAAACATATATCTTTCCAGCTTAGTCTTTATATTTTGTTCTTTGCTTTAGCATTTTTTATGTGTTTTACATTTTTATTATTTGTCTCCTTTTAATTTGAGCTCTAGTTTCTTCTCATTTCTTCAATGAAAAGTTTCATCTCTTTTAAAAAAAGAAAGGAAAAAAAAGAAGAAAAACCTATGTTCTTGTGCTTGAAGAGAGAGTGATTTGCACCTTTTGCTTGGCTACTTTACATTATATCTATGCTTTTGGGCTTACACTTATGTTTATATATATGATCAGGTGCTTGGTTTTAGTGAATACATTGCGGAAGTTTATGCTGCATATGAACAACACAGGATCGAAACTATGGTAATACTTCAGTATATTTACTATGGTACCTGTCCAATGAATTAATTGAAGTGATTGATCATATAGAAATTTGCTGCAGTCTAGATAATCAGTATGTATTTTATTTCATTCCATAAAGGATTATTTTCCATCATTCTTATAATTAGAATTAGGTCATAAAATTTAGTTCTGGTTTTGGCTCATGTGTGTTTCAAGACATCTAGAAGCACTAACATTTTTATTTTCTCTCTTTCGAGAAACTTCTGCAGCAAGACTCATTGAAAGGAGGAAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTAGCTGAGCAACAAAGAATGTTTGCCGAGGCACGTGCAAGAATGAATGGCAGTAATACTGCACCGAAGCAATCGGAGCCTGAGCAAAGTTTAGAGAGCTAATTTTAGGATCTTTATTTTCTTCAACAATAGGCAAGATTCCTTGACCCCTTCCATTTGTGCCTCAAATATGCCTTGTGCATATGTACAAAAAAGAAATGATTAACCTAGCTACTGGGCTCTGTGAAGATGCATTGTAATATATATCCATATTTGCGGATCCATGTTTAGTTATTAATACAAGTAGTGACTGTTTAAATCTC

mRNA sequence

GAAGAACCACAATAACCTCTGATAAAAATGCATATATCAACAATGCCCTTCCTCCACCACACCACCACCTCCTTCGCCTCCTACGATTCCGATCGTCTTCAATCCCTGGGATCGCCGTCGTCATTTTCCGGTTTTCTCTATTCCGTTTTTCTATTCTCTTCTGGGTCCTCTTTTGAAGGTTCGGTATGGAGCCGATGGACATAGTAGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACCAAGATTATCAAAGAGATGTTGCCCCCTGATGTACGGGTTGCAAGAGACGCTCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCGTCAGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAGCACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAATACATTGCGGAAGTTTATGCTGCATATGAACAACACAGGATCGAAACTATGAAACTTCTGCAGCAAGACTCATTGAAAGGAGGAAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTAGCTGAGCAACAAAGAATGTTTGCCGAGGCACGTGCAAGAATGAATGGCAGTAATACTGCACCGAAGCAATCGGAGCCTGAGCAAAGTTTAGAGAGCTAATTTTAGGATCTTTATTTTCTTCAACAATAGGCAAGATTCCTTGACCCCTTCCATTTGTGCCTCAAATATGCCTTGTGCATATGTACAAAAAAGAAATGATTAACCTAGCTACTGGGCTCTGTGAAGATGCATTGTAATATATATCCATATTTGCGGATCCATGTTTAGTTATTAATACAAGTAGTGACTGTTTAAATCTC

Coding sequence (CDS)

ATGGAGCCGATGGACATAGTAGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACCAAGATTATCAAAGAGATGTTGCCCCCTGATGTACGGGTTGCAAGAGACGCTCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCGTCAGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAGCACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAATACATTGCGGAAGTTTATGCTGCATATGAACAACACAGGATCGAAACTATGAAACTTCTGCAGCAAGACTCATTGAAAGGAGGAAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTAGCTGAGCAACAAAGAATGTTTGCCGAGGCACGTGCAAGAATGAATGGCAGTAATACTGCACCGAAGCAATCGGAGCCTGAGCAAAGTTTAGAGAGCTAA

Protein sequence

MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES*

Homology

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BLAST of CsGy1G003430 vs. ExPASy Swiss-Prot
Match: P49592 (Protein Dr1 homolog OS=Arabidopsis thaliana OX=3702 GN=DR1 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.5e-63
Identity = 126/160 (78.75%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EYI EVYAAYEQH+ ETM    QD+ +  KW+ GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETM----QDTQRSVKWNPGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 161
           +MTEEEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 QMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 156

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BLAST of CsGy1G003430 vs. ExPASy Swiss-Prot
Match: Q55DJ5 (Protein Dr1 homolog OS=Dictyostelium discoideum OX=44689 GN=dr1 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.0e-28
Identity = 66/146 (45.21%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 11  KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTI 70
           +++ SLPKAT++K+IKEMLP DV+ + + +DL++ECCVEFI+L+SSE+N++C +E+KRTI
Sbjct: 8   EDNLSLPKATVSKLIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGREQKRTI 67

Query: 71  APEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGAEMTEEEALAE 130
           A EHV+KAL  LGFS+Y  +V   Y++H++E    +   S    K+ N  + T E+ + E
Sbjct: 68  AAEHVIKALTELGFSDYTQKVSDVYDKHKLE----VSTKSKSSKKFENLGKPT-EQLIRE 127

Query: 131 QQRMFAEARARMNGSNTAPKQSEPEQ 157
           QQ +FA+AR+    S  A +  + +Q
Sbjct: 128 QQLLFAKARSAFQASPEAQQLQQLQQ 148

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BLAST of CsGy1G003430 vs. ExPASy Swiss-Prot
Match: O14348 (Negative cofactor 2 complex subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ncb2 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.4e-25
Identity = 61/141 (43.26%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 8   GKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEK 67
           G + ++ SLPKAT+ K++ ++LP D+   ++A+DLLIECCVEFI+LVSSE+NE+C KE K
Sbjct: 4   GFADDELSLPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAK 63

Query: 68  RTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGAEMTEEEA 127
           +TIA EH++KALE L F EYIAE      +H+ +     Q++  K       + ++ +E 
Sbjct: 64  KTIAAEHIIKALENLEFKEYIAEALEVAAEHKEQ-----QKNREKKSSKFEQSGVSRDEL 123

Query: 128 LAEQQRMFAEARARMNGSNTA 149
           L +Q+ + + AR R    N A
Sbjct: 124 LRQQEELLSRARERFKNQNIA 139

[Close]

BLAST of CsGy1G003430 vs. ExPASy Swiss-Prot
Match: B0Y0F3 (NCT transcriptional regulatory complex subunit B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=nctB PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-24
Identity = 66/138 (47.83%), Postives = 91/138 (65.94%), Query Frame = 0


Query: 10  SKEDASLPKATMTKIIKEMLPPD--VRVARDAQDLLIECCVEFINLVSSESNEVCSKEEK 69
           S +D SLPKAT+ KII E+LPP      ++DA+DLL+ECCVEFI L+SSE+N++  KE K
Sbjct: 8   SNDDLSLPKATVQKIITEILPPSSGQTFSKDARDLLMECCVEFITLISSEANDISEKEAK 67

Query: 70  RTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGAEMTEEEA 129
           +TIA EHV +AL  LGF +YI EV A  E+H+ E +K  ++   K       + +TEEE 
Sbjct: 68  KTIACEHVERALRDLGFGDYIPEVLAVAEEHK-EQLKSREKKQSK----MEQSGLTEEEL 127

Query: 130 LAEQQRMFAEARARMNGS 146
           L +QQ +F  A  + N +
Sbjct: 128 LRQQQELFRSATEKYNAA 140

[Close]

BLAST of CsGy1G003430 vs. ExPASy Swiss-Prot
Match: Q4WFF8 (NCT transcriptional regulatory complex subunit B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=nctB PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-24
Identity = 66/138 (47.83%), Postives = 91/138 (65.94%), Query Frame = 0


Query: 10  SKEDASLPKATMTKIIKEMLPPD--VRVARDAQDLLIECCVEFINLVSSESNEVCSKEEK 69
           S +D SLPKAT+ KII E+LPP      ++DA+DLL+ECCVEFI L+SSE+N++  KE K
Sbjct: 8   SNDDLSLPKATVQKIITEILPPSSGQTFSKDARDLLMECCVEFITLISSEANDISEKEAK 67

Query: 70  RTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGAEMTEEEA 129
           +TIA EHV +AL  LGF +YI EV A  E+H+ E +K  ++   K       + +TEEE 
Sbjct: 68  KTIACEHVERALRDLGFGDYIPEVLAVAEEHK-EQLKSREKKQSK----MEQSGLTEEEL 127

Query: 130 LAEQQRMFAEARARMNGS 146
           L +QQ +F  A  + N +
Sbjct: 128 LRQQQELFRSATEKYNAA 140

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BLAST of CsGy1G003430 vs. NCBI nr
Match: XP_011648700.1 (protein Dr1 homolog isoform X1 [Cucumis sativus] >KGN63793.2 hypothetical protein Csa_013109 [Cucumis sativus])

HSP 1 Score: 308 bits (790), Expect = 1.26e-105
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. NCBI nr
Match: XP_038879126.1 (protein Dr1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 304 bits (778), Expect = 8.53e-104
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR+ETMKLLQQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKLLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. NCBI nr
Match: XP_022134978.1 (protein Dr1 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 300 bits (769), Expect = 2.01e-102
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR+ETMK LQQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKSLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNG+NTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGNNTAPKQPEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. NCBI nr
Match: XP_022929360.1 (protein Dr1 homolog isoform X1 [Cucurbita moschata] >XP_023000849.1 protein Dr1 homolog isoform X1 [Cucurbita maxima] >XP_023530792.1 protein Dr1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300 bits (769), Expect = 2.01e-102
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKE+KRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR+ETMK LQQDSLKGGKWSNGA
Sbjct: 61  VCSKEDKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQLEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. NCBI nr
Match: XP_022921863.1 (protein Dr1 homolog isoform X1 [Cucurbita moschata] >XP_022987314.1 protein Dr1 homolog isoform X1 [Cucurbita maxima] >XP_023516546.1 protein Dr1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298 bits (762), Expect = 2.35e-101
Identity = 155/160 (96.88%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR ETMK  QQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMKFPQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. ExPASy TrEMBL
Match: A0A6J1KL43 (protein Dr1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495169 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 9.74e-103
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKE+KRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR+ETMK LQQDSLKGGKWSNGA
Sbjct: 61  VCSKEDKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQLEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. ExPASy TrEMBL
Match: A0A6J1C3I2 (protein Dr1 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007097 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 9.74e-103
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR+ETMK LQQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKSLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNG+NTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGNNTAPKQPEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. ExPASy TrEMBL
Match: A0A6J1EU70 (protein Dr1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435956 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 9.74e-103
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKE+KRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR+ETMK LQQDSLKGGKWSNGA
Sbjct: 61  VCSKEDKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQLEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. ExPASy TrEMBL
Match: A0A6J1JII3 (protein Dr1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484903 PE=4 SV=1)

HSP 1 Score: 298 bits (762), Expect = 1.14e-101
Identity = 155/160 (96.88%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR ETMK  QQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMKFPQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. ExPASy TrEMBL
Match: A0A6J1E503 (protein Dr1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430003 PE=4 SV=1)

HSP 1 Score: 298 bits (762), Expect = 1.14e-101
Identity = 155/160 (96.88%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR ETMK  QQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMKFPQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 160

[Close]

BLAST of CsGy1G003430 vs. TAIR 10
Match: AT5G23090.2 (nuclear factor Y, subunit B13 )

HSP 1 Score: 241.1 bits (614), Expect = 6.1e-64
Identity = 126/160 (78.75%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EYI EVYAAYEQH+ ETM    QD+ +  KW+ GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETM----QDTQRSVKWNPGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 161
           +MTEEEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 QMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 156

[Close]

BLAST of CsGy1G003430 vs. TAIR 10
Match: AT5G23090.1 (nuclear factor Y, subunit B13 )

HSP 1 Score: 241.1 bits (614), Expect = 6.1e-64
Identity = 126/160 (78.75%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EYI EVYAAYEQH+ ETM    QD+ +  KW+ GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETM----QDTQRSVKWNPGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 161
           +MTEEEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 QMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 156

[Close]

BLAST of CsGy1G003430 vs. TAIR 10
Match: AT5G23090.4 (nuclear factor Y, subunit B13 )

HSP 1 Score: 238.8 bits (608), Expect = 3.0e-63
Identity = 125/160 (78.12%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EYI EVYAAYEQH+ ETM     D+ +  KW+ GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETM-----DTQRSVKWNPGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 161
           +MTEEEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 QMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 155

[Close]

BLAST of CsGy1G003430 vs. TAIR 10
Match: AT5G08190.1 (nuclear factor Y, subunit B12 )

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-62
Identity = 124/156 (79.49%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLP DVRVARDAQDLLIECCVEFINL+SSESNE
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EY+ EVYAAYEQH+ ETM    QDS +  K ++GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYVEEVYAAYEQHKYETM----QDSQRSVKMNSGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQ 157
           EMTEEEA AEQQRMFAEARARMNG  T P+  + E+
Sbjct: 121 EMTEEEAAAEQQRMFAEARARMNGGVTVPQPEQLEE 152

[Close]

BLAST of CsGy1G003430 vs. TAIR 10
Match: AT5G08190.2 (nuclear factor Y, subunit B12 )

HSP 1 Score: 234.2 bits (596), Expect = 7.4e-62
Identity = 123/156 (78.85%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLP DVRVARDAQDLLIECCVEFINL+SSESNE
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EY+ EVYAAYEQH+ ETM     DS +  K ++GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYVEEVYAAYEQHKYETM-----DSQRSVKMNSGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQ 157
           EMTEEEA AEQQRMFAEARARMNG  T P+  + E+
Sbjct: 121 EMTEEEAAAEQQRMFAEARARMNGGVTVPQPEQLEE 151

The following BLAST results are available for this feature:

BLAST of CsGy1G003430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49592	8.5e-63	78.75	Protein Dr1 homolog OS=Arabidopsis thaliana OX=3702 GN=DR1 PE=1 SV=1	[more]
Q55DJ5	4.0e-28	45.21	Protein Dr1 homolog OS=Dictyostelium discoideum OX=44689 GN=dr1 PE=3 SV=1	[more]
O14348	5.4e-25	43.26	Negative cofactor 2 complex subunit beta OS=Schizosaccharomyces pombe (strain 97...	[more]
B0Y0F3	2.1e-24	47.83	NCT transcriptional regulatory complex subunit B OS=Neosartorya fumigata (strain...	[more]
Q4WFF8	2.1e-24	47.83	NCT transcriptional regulatory complex subunit B OS=Neosartorya fumigata (strain...	[more]

BLAST of CsGy1G003430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648700.1	1.26e-105	100.00	protein Dr1 homolog isoform X1 [Cucumis sativus] >KGN63793.2 hypothetical protei...	[more]
XP_038879126.1	8.53e-104	98.13	protein Dr1 homolog isoform X1 [Benincasa hispida]	[more]
XP_022134978.1	2.01e-102	96.88	protein Dr1 homolog isoform X1 [Momordica charantia]	[more]
XP_022929360.1	2.01e-102	96.88	protein Dr1 homolog isoform X1 [Cucurbita moschata] >XP_023000849.1 protein Dr1 ...	[more]
XP_022921863.1	2.35e-101	96.88	protein Dr1 homolog isoform X1 [Cucurbita moschata] >XP_022987314.1 protein Dr1 ...	[more]

BLAST of CsGy1G003430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KL43	9.74e-103	96.88	protein Dr1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495169 PE=4 ...	[more]
A0A6J1C3I2	9.74e-103	96.88	protein Dr1 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007097 PE...	[more]
A0A6J1EU70	9.74e-103	96.88	protein Dr1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435956 PE=...	[more]
A0A6J1JII3	1.14e-101	96.88	protein Dr1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484903 PE=4 ...	[more]
A0A6J1E503	1.14e-101	96.88	protein Dr1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430003 PE=...	[more]

BLAST of CsGy1G003430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23090.2	6.1e-64	78.75	nuclear factor Y, subunit B13	[more]
AT5G23090.1	6.1e-64	78.75	nuclear factor Y, subunit B13	[more]
AT5G23090.4	3.0e-63	78.13	nuclear factor Y, subunit B13	[more]
AT5G08190.1	2.0e-62	79.49	nuclear factor Y, subunit B12	[more]
AT5G08190.2	7.4e-62	78.85	nuclear factor Y, subunit B12	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 14..79 e-value: 2.8E-22 score: 78.7
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 4..150 e-value: 9.9E-40 score: 137.6
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 12..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..160
IPR044255	Protein Dr1 homolog	PANTHER	PTHR47173	PROTEIN DR1 HOMOLOG	coord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G003430.2	CsGy1G003430.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity