CsGy1G003230 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGAACCTTCCACGACAATCCCTCTTCTTCCCTTCTTCCTCCTCTTTTCTTCCAATTATTCTCCAATTCCACCCTTTCCCCACTGTTTCCTCTTTAAAAATCTCTTTCCTCTTTGTCTTGTCCCCCCCAAAATTCCATCCTCTGTTAACGATTCTTCCTTTTTCTCTCTGTAACCTTCCACTTTCTCCAACCACATCTCGCCACGCCCTTCTTACACCGCACCCCACTTCACACAACCATATACCTTCATCATTCGCATTGACCCAATTGAAAATCTTTCGATTTCAAGTCACCCCTTTTTTTCCCATTCTTGAATCCGTCTTATAATCCCAGTGAAACAGCAAAACTACCCAAAACCCACTTCTGAATTGGATCTTTCTTCTTTGTTTTCCCATCTCATTGATTTGTTTCTCTTTCGATTTTGTCCCTTGGATTGAATTCGTACCAGTTCCCGTACAGCGCTAAGTCTTGTTAATCCAATTCAACGAGCTTTTGTTGAAAGAAATCCAGGATCCTCGGTGTTGGGACTGAAGGAGCACACTCAGTTTTTCACTCTGTGGTGGAACTTCTTCTGCGATTTAAGGTTTGATTCTTCTATTTTTTTCCTTTTCGATTCAAACTATTTCTGGGTTTTTCGTTTCATCGCGGATTGGGAATGTTTCGTTTTGATTCTATTTCTTTTTGCATATTACCCATTTCACATTGTTGGGATTCTATCTAGTGTGTTCCTTTTGAGTGCTGGTGTAGTGTGAAATGTGAATCTAAGTGGAAGTGAGGCTCAATTTTAGTTCCTATGTGAATTAGGGTTTTTTTTTTTTTTTAAGGTTTTGTTCTCTGGTTTTTTAGGAATCATGTTGGTTATGAATGTGATGAGCTCTAAGAGACAAAGGCGTCCAAATGTTAGGCTAGGGGAAATTGGGGACATATCTGCAGCTTGGGCTTGTGGGTTTTCTCATAGCACTAGAGAAAAGTTAGCTCATAAGGAATGGAAACATGAATTAGATCAAACTGTGGATAATGAAGACAACCCCATTGTTTTTGGAGAATTGGAGCCATCATCTCCCAAGCTTACAGTCTCTGAACTGGGTGTCTCACCACAAATTTCAACAGAGTTGCAGCTTCATGAAGAGAACAAAAATAACCCCAATTCTTCAGATTTACATTTGGAATGTCCGATTTCAACTGAGTTAATTGATGTGACCAAACCTAGACTGAAGTTTAGTGATGTGACTAGGAAATGTAGAGATAAGAAGCGTCGGGGACGTAGTAAAAATGTTGGCTATGCCATTCTTCCTGGTAGTTGGAGTTCAAAACATAGCTCGGATGGCTACTCAATGGATGAGAAAGAATGTGAAGGGACAGGTAATTCTGCTAATGGTTTTGGTGATTCCTCTGATCATCAGACACCAACCACTAGTAAAGAGGAATGCGGCATTGATCAACCGACTCGTCAAGAGCGTGAGTTAAACAACGCTGCACGATTCACTAGTGAGAAGGCTCGGCATAAATCTGGTAACATGCTGGTTAAGATGAGATTAGAAGACGATGGTACTAATGTTGTTAGTAGATGGTTGGAGGAGGTTGGATTTGGCAAGTATGCTGGTGTGTTTGAGATGCATGAGGTGGATGAGGAAGCTTTGCCATTGCTGACCATTGAAGATCTTAAAGAGATCGGTGTATTCTCTGTCGGGACTCGGAGGAAGTTGTATAATGCAATCCGACAGTTAAGAGAAGGAGGAGAGGAGGAAGAAGAAGAAGAAGCAGCTGTCTGAAAGGTTAGAAAGCGAAATGCGCAGAGAATCATCAGCGCCTGTTTACAATTTTATCTTTTTGCTTGTGCAGGATGTGGCCATGGATGTACATATACCTCTAACATGTTTTGTGTTGGTTACATGTCTGAAAACACCAGAACTTCCTTTTTGGCAGTAAATTTGGTGACTTCGTTTTGAAGACAAAATGTGTTTTAAGAACCATGAGATGAAGATGAGATACTTGTGTTCTTCATTTGGTTGGTG CAAGAACCTTCCACGACAATCCCTCTTCTTCCCTTCTTCCTCCTCTTTTCTTCCAATTATTCTCCAATTCCACCCTTTCCCCACTGTTTCCTCTTTAAAAATCTCTTTCCTCTTTGTCTTGTCCCCCCCAAAATTCCATCCTCTGTTAACGATTCTTCCTTTTTCTCTCTGTAACCTTCCACTTTCTCCAACCACATCTCGCCACGCCCTTCTTACACCGCACCCCACTTCACACAACCATATACCTTCATCATTCGCATTGACCCAATTGAAAATCTTTCGATTTCAAGTCACCCCTTTTTTTCCCATTCTTGAATCCGTCTTATAATCCCAGTGAAACAGCAAAACTACCCAAAACCCACTTCTGAATTGGATCTTTCTTCTTTGTTTTCCCATCTCATTGATTTGTTTCTCTTTCGATTTTGTCCCTTGGATTGAATTCGTACCAGTTCCCGTACAGCGCTAAGTCTTGTTAATCCAATTCAACGAGCTTTTGTTGAAAGAAATCCAGGATCCTCGGTGTTGGGACTGAAGGAGCACACTCAGTTTTTCACTCTGTGGTGGAACTTCTTCTGCGATTTAAGGTTTGATTCTTCTATTTTTTTCCTTTTCGATTCAAACTATTTCTGGGTTTTTCGTTTCATCGCGGATTGGGAATGTTTCGTTTTGATTCTATTTCTTTTTGCATATTACCCATTTCACATTGTTGGGATTCTATCTAGTGTGTTCCTTTTGAGTGCTGGTGTAGTGTGAAATGTGAATCTAAGTGGAAGTGAGGCTCAATTTTAGTTCCTATGTGAATTAGGGTTTTTTTTTTTTTTTAAGGTTTTGTTCTCTGGTTTTTTAGGAATCATGTTGGTTATGAATGTGATGAGCTCTAAGAGACAAAGGCGTCCAAATGTTAGGCTAGGGGAAATTGGGGACATATCTGCAGCTTGGGCTTGTGGGTTTTCTCATAGCACTAGAGAAAAGTTAGCTCATAAGGAATGGAAACATGAATTAGATCAAACTGTGGATAATGAAGACAACCCCATTGTTTTTGGAGAATTGGAGCCATCATCTCCCAAGCTTACAGTCTCTGAACTGGGTGTCTCACCACAAATTTCAACAGAGTTGCAGCTTCATGAAGAGAACAAAAATAACCCCAATTCTTCAGATTTACATTTGGAATGTCCGATTTCAACTGAGTTAATTGATGTGACCAAACCTAGACTGAAGTTTAGTGATGTGACTAGGAAATGTAGAGATAAGAAGCGTCGGGGACGTAGTAAAAATGTTGGCTATGCCATTCTTCCTGGTAGTTGGAGTTCAAAACATAGCTCGGATGGCTACTCAATGGATGAGAAAGAATGTGAAGGGACAGGTAATTCTGCTAATGGTTTTGGTGATTCCTCTGATCATCAGACACCAACCACTAGTAAAGAGGAATGCGGCATTGATCAACCGACTCGTCAAGAGCGTGAGTTAAACAACGCTGCACGATTCACTAGTGAGAAGGCTCGGCATAAATCTGGTAACATGCTGGTTAAGATGAGATTAGAAGACGATGGTACTAATGTTGTTAGTAGATGGTTGGAGGAGGTTGGATTTGGCAAGTATGCTGGTGTGTTTGAGATGCATGAGGTGGATGAGGAAGCTTTGCCATTGCTGACCATTGAAGATCTTAAAGAGATCGGTGTATTCTCTGTCGGGACTCGGAGGAAGTTGTATAATGCAATCCGACAGTTAAGAGAAGGAGGAGAGGAGGAAGAAGAAGAAGAAGCAGCTGTCTGAAAGGTTAGAAAGCGAAATGCGCAGAGAATCATCAGCGCCTGTTTACAATTTTATCTTTTTGCTTGTGCAGGATGTGGCCATGGATGTACATATACCTCTAACATGTTTTGTGTTGGTTACATGTCTGAAAACACCAGAACTTCCTTTTTGGCAGTAAATTTGGTGACTTCGTTTTGAAGACAAAATGTGTTTTAAGAACCATGAGATGAAGATGAGATACTTGTGTTCTTCATTTGGTTGGTG ATGTTGGTTATGAATGTGATGAGCTCTAAGAGACAAAGGCGTCCAAATGTTAGGCTAGGGGAAATTGGGGACATATCTGCAGCTTGGGCTTGTGGGTTTTCTCATAGCACTAGAGAAAAGTTAGCTCATAAGGAATGGAAACATGAATTAGATCAAACTGTGGATAATGAAGACAACCCCATTGTTTTTGGAGAATTGGAGCCATCATCTCCCAAGCTTACAGTCTCTGAACTGGGTGTCTCACCACAAATTTCAACAGAGTTGCAGCTTCATGAAGAGAACAAAAATAACCCCAATTCTTCAGATTTACATTTGGAATGTCCGATTTCAACTGAGTTAATTGATGTGACCAAACCTAGACTGAAGTTTAGTGATGTGACTAGGAAATGTAGAGATAAGAAGCGTCGGGGACGTAGTAAAAATGTTGGCTATGCCATTCTTCCTGGTAGTTGGAGTTCAAAACATAGCTCGGATGGCTACTCAATGGATGAGAAAGAATGTGAAGGGACAGGTAATTCTGCTAATGGTTTTGGTGATTCCTCTGATCATCAGACACCAACCACTAGTAAAGAGGAATGCGGCATTGATCAACCGACTCGTCAAGAGCGTGAGTTAAACAACGCTGCACGATTCACTAGTGAGAAGGCTCGGCATAAATCTGGTAACATGCTGGTTAAGATGAGATTAGAAGACGATGGTACTAATGTTGTTAGTAGATGGTTGGAGGAGGTTGGATTTGGCAAGTATGCTGGTGTGTTTGAGATGCATGAGGTGGATGAGGAAGCTTTGCCATTGCTGACCATTGAAGATCTTAAAGAGATCGGTGTATTCTCTGTCGGGACTCGGAGGAAGTTGTATAATGCAATCCGACAGTTAAGAGAAGGAGGAGAGGAGGAAGAAGAAGAAGAAGCAGCTGTCTGA MLVMNVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTREKLAHKEWKHELDQTVDNEDNPIVFGELEPSSPKLTVSELGVSPQISTELQLHEENKNNPNSSDLHLECPISTELIDVTKPRLKFSDVTRKCRDKKRRGRSKNVGYAILPGSWSSKHSSDGYSMDEKECEGTGNSANGFGDSSDHQTPTTSKEECGIDQPTRQERELNNAARFTSEKARHKSGNMLVKMRLEDDGTNVVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGTRRKLYNAIRQLREGGEEEEEEEAAV* Homology
BLAST of CsGy1G003230 vs. ExPASy Swiss-Prot
Match: Q4ACU6 (SH3 and multiple ankyrin repeat domains protein 3 OS=Mus musculus OX=10090 GN=Shank3 PE=1 SV=3) HSP 1 Score: 52.4 bits (124), Expect = 1.1e-05 Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0
BLAST of CsGy1G003230 vs. ExPASy Swiss-Prot
Match: Q9JLU4 (SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3) HSP 1 Score: 52.4 bits (124), Expect = 1.1e-05 Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0
BLAST of CsGy1G003230 vs. ExPASy Swiss-Prot
Match: Q9BYB0 (SH3 and multiple ankyrin repeat domains protein 3 OS=Homo sapiens OX=9606 GN=SHANK3 PE=1 SV=3) HSP 1 Score: 51.2 bits (121), Expect = 2.4e-05 Identity = 24/56 (42.86%), Postives = 33/56 (58.93%), Query Frame = 0
BLAST of CsGy1G003230 vs. ExPASy Swiss-Prot
Match: Q9H694 (Protein bicaudal C homolog 1 OS=Homo sapiens OX=9606 GN=BICC1 PE=1 SV=2) HSP 1 Score: 50.4 bits (119), Expect = 4.1e-05 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = 0
BLAST of CsGy1G003230 vs. ExPASy Swiss-Prot
Match: Q99MQ1 (Protein bicaudal C homolog 1 OS=Mus musculus OX=10090 GN=Bicc1 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.1e-05 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of CsGy1G003230 vs. NCBI nr
Match: XP_004138329.1 (uncharacterized protein LOC101220579 [Cucumis sativus] >KGN63766.1 hypothetical protein Csa_014281 [Cucumis sativus]) HSP 1 Score: 597 bits (1538), Expect = 8.46e-215 Identity = 303/306 (99.02%), Postives = 304/306 (99.35%), Query Frame = 0
BLAST of CsGy1G003230 vs. NCBI nr
Match: TYJ98241.1 (uncharacterized protein E5676_scaffold346G00130 [Cucumis melo var. makuwa]) HSP 1 Score: 563 bits (1452), Expect = 1.01e-201 Identity = 288/304 (94.74%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of CsGy1G003230 vs. NCBI nr
Match: XP_008453318.1 (PREDICTED: uncharacterized protein LOC103494071 [Cucumis melo] >KAA0058018.1 uncharacterized protein E6C27_scaffold274G003230 [Cucumis melo var. makuwa]) HSP 1 Score: 557 bits (1435), Expect = 4.55e-199 Identity = 284/303 (93.73%), Postives = 294/303 (97.03%), Query Frame = 0
BLAST of CsGy1G003230 vs. NCBI nr
Match: XP_038879832.1 (uncharacterized protein LOC120071569 [Benincasa hispida] >XP_038879834.1 uncharacterized protein LOC120071569 [Benincasa hispida]) HSP 1 Score: 509 bits (1312), Expect = 2.01e-180 Identity = 261/300 (87.00%), Postives = 276/300 (92.00%), Query Frame = 0
BLAST of CsGy1G003230 vs. NCBI nr
Match: XP_022987927.1 (uncharacterized protein LOC111485334 [Cucurbita maxima]) HSP 1 Score: 462 bits (1190), Expect = 6.35e-162 Identity = 242/304 (79.61%), Postives = 264/304 (86.84%), Query Frame = 0
BLAST of CsGy1G003230 vs. ExPASy TrEMBL
Match: A0A0A0LUR2 (SAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015600 PE=4 SV=1) HSP 1 Score: 597 bits (1538), Expect = 4.10e-215 Identity = 303/306 (99.02%), Postives = 304/306 (99.35%), Query Frame = 0
BLAST of CsGy1G003230 vs. ExPASy TrEMBL
Match: A0A5D3BHV6 (SAM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00130 PE=4 SV=1) HSP 1 Score: 563 bits (1452), Expect = 4.88e-202 Identity = 288/304 (94.74%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of CsGy1G003230 vs. ExPASy TrEMBL
Match: A0A5A7US96 (SAM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003230 PE=4 SV=1) HSP 1 Score: 557 bits (1435), Expect = 2.21e-199 Identity = 284/303 (93.73%), Postives = 294/303 (97.03%), Query Frame = 0
BLAST of CsGy1G003230 vs. ExPASy TrEMBL
Match: A0A1S3BVZ9 (uncharacterized protein LOC103494071 OS=Cucumis melo OX=3656 GN=LOC103494071 PE=4 SV=1) HSP 1 Score: 557 bits (1435), Expect = 2.21e-199 Identity = 284/303 (93.73%), Postives = 294/303 (97.03%), Query Frame = 0
BLAST of CsGy1G003230 vs. ExPASy TrEMBL
Match: A0A6J1JBP7 (uncharacterized protein LOC111485334 OS=Cucurbita maxima OX=3661 GN=LOC111485334 PE=4 SV=1) HSP 1 Score: 462 bits (1190), Expect = 3.07e-162 Identity = 242/304 (79.61%), Postives = 264/304 (86.84%), Query Frame = 0
BLAST of CsGy1G003230 vs. TAIR 10
Match: AT5G23680.1 (Sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 80.5 bits (197), Expect = 2.6e-15 Identity = 35/60 (58.33%), Postives = 49/60 (81.67%), Query Frame = 0
BLAST of CsGy1G003230 vs. TAIR 10
Match: AT3G48800.1 (Sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 79.7 bits (195), Expect = 4.5e-15 Identity = 64/167 (38.32%), Postives = 90/167 (53.89%), Query Frame = 0
BLAST of CsGy1G003230 vs. TAIR 10
Match: AT2G45700.1 (sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 53.1 bits (126), Expect = 4.5e-07 Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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