CsGy1G002910 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G002910
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Glycine-rich RNA-binding protein 2
Location	Gy14Chr1: 1808539 .. 1813615 (-)
RNA-Seq Expression	CsGy1G002910
Synteny	CsGy1G002910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTATTAACCACCAAAACAGAGCTTATGCACGTTGGCGTTTATAGGGATAGGTGTGGACGTTCTTACGTACACATGTACCGTATTTCATTCATTTTCAGTGTTTGTTTTCTTAGACTCTCTTGTTTAGTCGGATTTGGTACGTTGTTGCAATGAGTTTGTTAGGAAATGTGTTGCGACAGTGTTTATGTGTGTATTTTAATTTGTTGAAATAGAAGTTGAATGTAATTTAATTTGAGGCTGACTGGAAACTTTCATTTTTGCCTTTGAATTGTTGGTTAATTATTCGCCACTTATTTCTTTCAGGTTGCTTCAAAATGGCTTTTTTAAGTAAGTTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGATTGGATTAGATTTGCACCGTTCCAGTTTGTCTCTCTCTCAAGCTGTACGATGGATGTCTTCCATGGAAAGTTCAAAAGTTTTTGTCGGAGGTTCTCTGAGAATACTTTGTTATTGTTCTTATATTTTTTTCTTTGAAGAACGCGTATATGTCAACTTATTTGTCCTTGTCTTGATTCTTGTGCTTGTATCTACGTTTGCCAGGTATTTCGTTCAGCACTGATGATCAAAGTCTCAGGGAAGCCTTTACCAAATATGGGGAAGTAATCGAAGGTATATCCCCCAACTCATTTACAACTAGTGGCGAAGGTTATCTTTGAAGTATACGTTACATAAATGCGATATGGAATAACAAACTTTGGAACCTGTATAGTCAGATCTGCTCCAAGAATTATGTCTCTTTTAGTGTTAAATATTAAATATTTTCTGTTATAAGGCTGAGCCAGTGGCTCGGGGGTGTAGCTGGACACTGCTTGTTTAGCTAGTGGATTGTGTCAAGTCTGTATTTTTCCATGAACGTTGCTTTCCTTGTTTACCCTCCTTTTCTTTGCCACCATGATAGCTAGGGTCATTGTAGACCGTGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCATTGGATGGACAGGTAATGATTCTGCAGTCGAGACATTGAGATTGAAAAGGATAAAACGTAGTGTTATATTCATATGCTGCAATATATTGTGGAATTAATGCATCACCGCTCATATAATGCTTAATGGAAGTTGTCTGCATTCTTATAGACTGAGTTACTTTTATGAAGATGACTGTATCTAGTTAATGTATTTATGTTAATTGATCTTGTGTGAATGTCTTCATGCAATACCTTGAATGCTACATTTTCTCAAATAGCTGGTAATGTTTGCATACAAAATTGCCATTTAGATATTTGTATGGAATTTGGAGACTTGTTCCACTTTCGAATCTACGAGAACAAATCATATTAAACCGACTGACTAATTAACCAGATTCATTCTTTTAGTTAATTTAATTTAGTCCTCTAGATTTGCTAAACAGTAGATTTAATGGCTCAAGTTAATAATATTTCTGTTCCTTATACAACAGGACCTTCATGGTCGCCGAGTGAGAGTGAATTATGCTAATGATAGAGCTCGTGGTGGTGGCGGTGGTTATGGCGGTGGCGGCTATGGTGGCGGCGGTTATGGTGGTGGTGGAGGTTATGGTGGTGGTGGAGGTTATGGTGGTGGTGGGGGTTATGGAGCTGGTGGCGGGGGGGCTTATGGAGGTGGTGGCTATAGTGGTGGTGGTGCTGGAGGTTATGGTGGATATTCTGGAATGGGTGGGGGCAATTATGGCGGAGGAAGTGGAGGAAATTTTAGTAATGATTATGCCAGTGACAACCGTGGAAGTGTTGGTGGCTTTGGTGGTAATGATGCTGGCTACAACGCTGCTAGCAATTTTGCTACTGGAAACACATTCGGTAGTGAAAGTAATGCAGGTTTTGGTAGCAGTGACTATTTTGCCAAGAGCGAGGGGGAACAATTTGGCAGCAATGAAACAAACACCATGAAGGCATCTGGAGAGGATCATTTTGAAGAAAATGCTAGGGATGAAGACGATTCAAACGACTTTGCTAAAAGAGCCTGATAGATTTTTCCATATGTGCTATCCTCCATAGTTATAACTTCAACTTCATCCAGCATTTTTGGTTATGGCCATGTCCATGTAGATTTTCCCTACATTCTCTACCGTACTGGAACCCTCTGACTTTGTTTCATATGTTCGAGACTTGCTTCGATGATTGTGAATTTTCAATTGAACTTCCAATCTAGTTTCTTCTCAATGATAAATAAGTAGTGTTTTTTTTTTGTCTGTCCTCTATTAGGAGGGTGGGTACCATCTTCTCGATTATGGTCGGTGGGCACCCCAGTGTTGTTTGCAGCCATACTACATTGCACTCGTTTTTGTCCATTATGATATCCCATAACTCCATAAAAAGTATTTTATGGTGTTGGTGTCGTTTGGTTGTGTTTTGAAGTAAAGTGTCAATGGGTTGGACTTAAGAGGTTTGTGATTAAGTTTTGTTAAAATTCTTTGGTGCAAAGGAGAAGTTTATGATTAGGGTTCAAAAAAGTTGAGTTGACATTACTGGGTGCACAACAGTGAAATGTGTTGAAGTTGGTAGGCCAAATAGCTTCAATATTTTATCACTGCATAAATCTATTAGACTTGGGTCATGTTTTGTTTTGATATTATTGCGAAAGTAATTGACCTGCGAATGTTGGTTTTTTTAGTAATATCAATGGTAACCATAATTTAAAACATAACAGTAACTATAATTCATAGTTTTCTGTTTACTGAATGTAGATTTCACATGTTAGTATGGATGCAAAATATAAGTTAATGATCATCTTATGAAGTATGGATGCAAAATACAAGTTAATGATCATAAGATTCATTTATGTAAGACTCGTGTAAAGATGGCCTTAGTGCCATGGTTCAATAATTCAGTAATTCATACAATAAAGCTAGACTTGGTTAAAAGATTCAGTGATTAACTATATACAGAAAGCTAGTTGAACGCAAACTATAAAATTCACTATATAAAGACTATATGAACGCTCGTTGAAGCAAAATAATGATTGATGATAATTTATAGTGTTTACATTAATGATTGATCAATGTGGGGGACCGAGCTCTTTTACTGTAGCACTCTTTTTTCTTTTTTGGGTGTATCTCTAAACTTACATTATCTATTATCCTCTATAACTGCCTCAGCCATCATCTTTATCCATCGAAAATAACCATCTTTGTGCATTCCGAACCACAGGAGAACCCATTCTGGTTTTCTCAACAATCTGCTTTATCAACTGCTTTTCTATCTCATCATCATAATCACTGCTTTCATCTTCACTGCCATCTATCTCATTTGACTCTCCTTTCATTGTGCCAAACATTTTATAAGAATTTTTCATTTTCTCCTCAACAAGTATTCGACCCAGGCTTATCGATCCGTTTCTTTTCCCATTCTGAACTGAAAATGGATGACTGTTAACAGTTGTTTGGCTTTCTGAATGCTTACTTTCATCACCTGTTGAAGGTGAATCTATAGTTTCTTCTTCAGAATCGTCCATATCCATTAACTCACTATATGCATCGTTGTAGGCATCTAGAGCTTCTCCTGATAAATTCATAACAAGGGGTTGAGCAGTTAGGCTTTCTTCACTAGATGAATGTAGCATTTCATTATGGGTGAATTCTTTCCAAGAATCAGTTCGCTTGGCTTCAATGTGGTGAAGTCTCCTCTCACTGTTCTCAAGGGCCGTTTCGAGCTCTCTCACACGTGCTTCAAGCCTTGACTGGATGACTTCATGTAGTCGAACACTTAGCTCCCAAGGTGAAACTGTGTAGTTACCCGAGGAGGTAAACTCACTTGCATCTTGATTTCGCTGAAGTTTAGGACTTAGCTCACTGATCATGTCAGCTCTCAACTCACCTTCAGAAAAATCTACTGTAAATTCTTGATCAAGCTGCAAAAAGAAATTGCTCCATATGAGCACTAAACAACTGAGTTCTAGTTTTTATCATTCTTCAGAACGATTTGATTCCCTCATTGGCAGCGCAAAACACAAAAATGTCGGCCAATCTCCACGTGTATATCAAATGCTCTCTTTCAATGTGTTCGATGAACTAAACTGTGTTGTGCAGAGTTTTATGTATAGCTTACATTTGTTCTACAAGTTCTCTAATTTGTGAATGGAGGGCCAAACCATGACACATAAGCGCAACAACAGTTGGCTGCCAATGTGAAAATAATGAAGATCCTAAATGACAATCTTAAGCTAGATTTATGGTTATCAAAGACTTCAACAATAACAGTCTAAACTAAATATCTCCTATTCAGGATCCTGGCAACAATAAGCACAAATATAAAAGCTAACTATAAAACACAGCCGAACATTTGAATTCCAGAGAAAAAACGTATAATCAAGATAGCAAAAAACACGACCATGTACTTAAAAGGGAGTATCCACAAGAACAAATAACATTTATATGGTTGCAGCGAAACAATGAAATCATGTGTGTAAATACAGAAAGAAGAAGCAATCAACAAAAAATGCCACCATATCTTTGTTTATGCACATGCTTGATGATGTAATGAATAGACACAATTACCTCATGAAGATCAGAGAATCTTTTATCTGTACTCGATGTTTCAGTATTTAGTCCCAACCTCTGAAGTTCTGCTTCAAGCTCAGCTTCAATTTTACTCAGAGAATCTGAATCCTCTTCGGGGTTTGGTTTGAATAATTCCTTATCATCAGATTTAGCTGAAGGATTGAGATTCTGGTCTTTCCCACCAAAGAAAGAATTCTCAGATATGCCTACTGATTCACAATTCTCATTTGAAAGTTCCTTCACTGTCAGAGAATCCTTCATCTCAAGTTCCTCTTGTAGATCTTGGACCAAGTTCTCAGTATGCCTTAACAACTCTTTGAGCTTGTCTATTTCACGCTTATTTTGCATGAAGGAAATTAAGCCGACAGAAATCCCAAGACAGAATAGAATCATTCGATCTGGTGATCACAATAAAATGTAAATTTAGGCACAATCCATGAAGTGGTAACCAATTAAGAACACTGGTGATGAATACCTAGACTAGAACAAATGAGAAGAAAAG

mRNA sequence

ATGTTCTTATTAACCACCAAAACAGAGCTTATGCACGTTGGCGTTTATAGGGATAGGTGTGGACGTTCTTACGTACACATGTACCGTTGCTTCAAAATGGCTTTTTTAAGTAAGTTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGATTGGATTAGATTTGCACCGTTCCAGTTTGTCTCTCTCTCAAGCTGTACGATGGATGTCTTCCATGGAAAGTTCAAAAGTTTTTGTCGGAGGTATTTCGTTCAGCACTGATGATCAAAGTCTCAGGGAAGCCTTTACCAAATATGGGGAAGTAATCGAAGCTAGGGTCATTGTAGACCGTGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCATTGGATGGACAGGACCTTCATGGTCGCCGAGTGAGAGTGAATTATGCTAATGATAGAGCTCGTGGTGGTGGCGGTGGTTATGGCGGTGGCGGCTATGGTGGCGGCGGTTATGGTGGTGGTGGAGGTTATGGTGGTGGTGGAGGTTATGGTGGTGGTGGGGGTTATGGAGCTGGTGGCGGGGGGGCTTATGGAGGTGGTGGCTATAGTGGTGGTGGTGCTGGAGGTTATGGTGGATATTCTGGAATGGGTGGGGGCAATTATGGCGGAGGAAGTGGAGGAAATTTTAGTAATGATTATGCCAGTGACAACCGTGGAAGTGTTGGTGGCTTTGGTGGTAATGATGCTGGCTACAACGCTGCTAGCAATTTTGCTACTGGAAACACATTCGGTAGTGAAAGTAATGCAGGTTTTGGTAGCAGTGACTATTTTGCCAAGAGCGAGGGGGAACAATTTGGCAGCAATGAAACAAACACCATGAAGGCATCTGGAGAGGATCATTTTGAAGAAAATGCTAGGGATGAAGACGATTCAAACGACTTTGCTAAAAGAGCCTGATAGATTTTTCCATATGTGCTATCCTCCATAGTTATAACTTCAACTTCATCCAGCATTTTTGGTTATGGCCATGTCCATGTAGATTTTCCCTACATTCTCTACCGTACTGGAACCCTCTGACTTTGTTTCATATGTTCGAGACTTGCTTCGATGATTGTGAATTTTCAATTGAACTTCCAATCTAGTTTCTTCTCAATGATAAATAAGTAGTGTTTTTTTTTTGTCTGTCCTCTATTAGGAGGGTGGGTACCATCTTCTCGATTATGGTCGGTGGGCACCCCAGTGTTGTTTGCAGCCATACTACATTGCACTCGTTTTTGTCCATTATGATATCCCATAACTCCATAAAAAGTATTTTATGGTGTTGGTGTCGTTTGGTTGTGTTTTGAAGTAAAGTGTCAATGGGTTGGACTTAAGAGGTTTGTGATTAAGTTTTGTTAAAATTCTTTGGTGCAAAGGAGAAGTTTATGATTAGGGTTCAAAAAAGTTGAGTTGACATTACTGGGTGCACAACAGTGAAATGTGTTGAAGTTGGTAGGCCAAATAGCTTCAATATTTTATCACTGCATAAATCTATTAGACTTGGGTCATGTTTTGTTTTGATATTATTGCGAAAGTAATTGACCTGCGAATGTTGGTTTTTTTAGTAATATCAATGGTAACCATAATTTAAAACATAACAGTAACTATAATTCATAGTTTTCTGTTTACTGAATGTAGATTTCACATGTTAGTATGGATGCAAAATATAAGTTAATGATCATCTTATGAAGTATGGATGCAAAATACAAGTTAATGATCATAAGATTCATTTATGTAAGACTCGTGTAAAGATGGCCTTAGTGCCATGGTTCAATAATTCAGTAATTCATACAATAAAGCTAGACTTGGTTAAAAGATTCAGTGATTAACTATATACAGAAAGCTAGTTGAACGCAAACTATAAAATTCACTATATAAAGACTATATGAACGCTCGTTGAAGCAAAATAATGATTGATGATAATTTATAGTGTTTACATTAATGATTGATCAATGTGGGGGACCGAGCTCTTTTACTGTAGCACTCTTTTTTCTTTTTTGGGTGTATCTCTAAACTTACATTATCTATTATCCTCTATAACTGCCTCAGCCATCATCTTTATCCATCGAAAATAACCATCTTTGTGCATTCCGAACCACAGGAGAACCCATTCTGGTTTTCTCAACAATCTGCTTTATCAACTGCTTTTCTATCTCATCATCATAATCACTGCTTTCATCTTCACTGCCATCTATCTCATTTGACTCTCCTTTCATTGTGCCAAACATTTTATAAGAATTTTTCATTTTCTCCTCAACAAGTATTCGACCCAGGCTTATCGATCCGTTTCTTTTCCCATTCTGAACTGAAAATGGATGACTGTTAACAGTTGTTTGGCTTTCTGAATGCTTACTTTCATCACCTGTTGAAGGTGAATCTATAGTTTCTTCTTCAGAATCGTCCATATCCATTAACTCACTATATGCATCGTTGTAGGCATCTAGAGCTTCTCCTGATAAATTCATAACAAGGGGTTGAGCAGTTAGGCTTTCTTCACTAGATGAATGTAGCATTTCATTATGGGTGAATTCTTTCCAAGAATCAGTTCGCTTGGCTTCAATGTGGTGAAGTCTCCTCTCACTGTTCTCAAGGGCCGTTTCGAGCTCTCTCACACGTGCTTCAAGCCTTGACTGGATGACTTCATGTAGTCGAACACTTAGCTCCCAAGGTGAAACTGTGTAGTTACCCGAGGAGGTAAACTCACTTGCATCTTGATTTCGCTGAAGTTTAGGACTTAGCTCACTGATCATGTCAGCTCTCAACTCACCTTCAGAAAAATCTACTGTAAATTCTTGATCAAGCTGCAAAAAGAAATTGCTCCATATGAGCACTAAACAACTGAGTTCTAGTTTTTATCATTCTTCAGAACGATTTGATTCCCTCATTGGCAGCGCAAAACACAAAAATGTCGGCCAATCTCCACGTGTATATCAAATGCTCTCTTTCAATGTGTTCGATGAACTAAACTGTGTTGTGCAGAGTTTTATGTATAGCTTACATTTGTTCTACAAGTTCTCTAATTTGTGAATGGAGGGCCAAACCATGACACATAAGCGCAACAACAGTTGGCTGCCAATGTGAAAATAATGAAGATCCTAAATGACAATCTTAAGCTAGATTTATGGTTATCAAAGACTTCAACAATAACAGTCTAAACTAAATATCTCCTATTCAGGATCCTGGCAACAATAAGCACAAATATAAAAGCTAACTATAAAACACAGCCGAACATTTGAATTCCAGAGAAAAAACGTATAATCAAGATAGCAAAAAACACGACCATGTACTTAAAAGGGAGTATCCACAAGAACAAATAACATTTATATGGTTGCAGCGAAACAATGAAATCATGTGTGTAAATACAGAAAGAAGAAGCAATCAACAAAAAATGCCACCATATCTTTGTTTATGCACATGCTTGATGATGTAATGAATAGACACAATTACCTCATGAAGATCAGAGAATCTTTTATCTGTACTCGATGTTTCAGTATTTAGTCCCAACCTCTGAAGTTCTGCTTCAAGCTCAGCTTCAATTTTACTCAGAGAATCTGAATCCTCTTCGGGGTTTGGTTTGAATAATTCCTTATCATCAGATTTAGCTGAAGGATTGAGATTCTGGTCTTTCCCACCAAAGAAAGAATTCTCAGATATGCCTACTGATTCACAATTCTCATTTGAAAGTTCCTTCACTGTCAGAGAATCCTTCATCTCAAGTTCCTCTTGTAGATCTTGGACCAAGTTCTCAGTATGCCTTAACAACTCTTTGAGCTTGTCTATTTCACGCTTATTTTGCATGAAGGAAATTAAGCCGACAGAAATCCCAAGACAGAATAGAATCATTCGATCTGGTGATCACAATAAAATGTAAATTTAGGCACAATCCATGAAGTGGTAACCAATTAAGAACACTGGTGATGAATACCTAGACTAGAACAAATGAGAAGAAAAG

Coding sequence (CDS)

ATGTTCTTATTAACCACCAAAACAGAGCTTATGCACGTTGGCGTTTATAGGGATAGGTGTGGACGTTCTTACGTACACATGTACCGTTGCTTCAAAATGGCTTTTTTAAGTAAGTTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGATTGGATTAGATTTGCACCGTTCCAGTTTGTCTCTCTCTCAAGCTGTACGATGGATGTCTTCCATGGAAAGTTCAAAAGTTTTTGTCGGAGGTATTTCGTTCAGCACTGATGATCAAAGTCTCAGGGAAGCCTTTACCAAATATGGGGAAGTAATCGAAGCTAGGGTCATTGTAGACCGTGAAACTGGAAGATCCAGAGGATTTGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCATTGGATGGACAGGACCTTCATGGTCGCCGAGTGAGAGTGAATTATGCTAATGATAGAGCTCGTGGTGGTGGCGGTGGTTATGGCGGTGGCGGCTATGGTGGCGGCGGTTATGGTGGTGGTGGAGGTTATGGTGGTGGTGGAGGTTATGGTGGTGGTGGGGGTTATGGAGCTGGTGGCGGGGGGGCTTATGGAGGTGGTGGCTATAGTGGTGGTGGTGCTGGAGGTTATGGTGGATATTCTGGAATGGGTGGGGGCAATTATGGCGGAGGAAGTGGAGGAAATTTTAGTAATGATTATGCCAGTGACAACCGTGGAAGTGTTGGTGGCTTTGGTGGTAATGATGCTGGCTACAACGCTGCTAGCAATTTTGCTACTGGAAACACATTCGGTAGTGAAAGTAATGCAGGTTTTGGTAGCAGTGACTATTTTGCCAAGAGCGAGGGGGAACAATTTGGCAGCAATGAAACAAACACCATGAAGGCATCTGGAGAGGATCATTTTGAAGAAAATGCTAGGGATGAAGACGATTCAAACGACTTTGCTAAAAGAGCCTGA

Protein sequence

MFLLTTKTELMHVGVYRDRCGRSYVHMYRCFKMAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDRARGGGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGGAGGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNAGFGSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA*

Homology

[Close]

BLAST of CsGy1G002910 vs. ExPASy Swiss-Prot
Match: Q9FNR1 (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.5e-45
Identity = 171/303 (56.44%), Postives = 198/303 (65.35%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSKFGNIL+Q  NK++   +  SS SL QA+R MS   SSK+F+GG+++S D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEV++ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 153 DRARG---GGGGY--GGGGYGG-GGYGGG-GGYGGGGGYGGG-GGYGAGGGGAYGG---G 212
           DR  G   GGGGY  GGGGYGG GGYGGG GGYGG GGYGGG GGYG   GG YGG   G
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGNAAG 180

Query: 213 GYSGGGAGGYG----GYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASN 272
           GY G GAGGYG    G+ G GGG    G  G+  N Y   +  S G  G     YN +S 
Sbjct: 181 GYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAVG----DYNGSSG 240

Query: 273 FATGNTFGSESNAGFGSSDYFAKS---EGEQFGSNETNTM---KASGEDHFEENARDEDD 315
           + + NT+GS SN GF     F  S      QFG + T      +  GED F    + E  
Sbjct: 241 YGSANTYGS-SNGGFAGDSQFGGSPVGNSSQFGGDNTQFTAGGQFGGEDQFGSMEKSETK 295

[Close]

BLAST of CsGy1G002910 vs. ExPASy Swiss-Prot
Match: Q9C909 (Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG5 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.7e-28
Identity = 155/307 (50.49%), Postives = 188/307 (61.24%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSK G +  Q ++         +S S+ Q++R MS   SSK+FVGGIS+STD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSH------VTASSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAF+KYGEV++A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 153 DRARG-GGGGYG--GGGYGG--GGYGG-GGGYGGG-GGYGGGGGY--GAGGGGAYGGGGY 212
           +R  G GG G+G  GGGYG   GGYG   GGYGGG GGYGG   Y   AGGGG YGG   
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSS 180

Query: 213 SGGGAGGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGND---------AGYN- 272
            GG AGGYGG     G   GGG GG  SN       G  GG GG++         AG++ 
Sbjct: 181 YGGNAGGYGGNPPYSGNAVGGG-GGYGSNFGGGGGYGVAGGVGGSENFAQGSSTNAGFDD 240

Query: 273 -AASNFATGNTFGSESNAGFGSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDS 320
              SN   GN    ++ +G G  + F  S+  QFG  E N    +G   F     D+ D 
Sbjct: 241 KFESNQPLGNDTDHQTESGLGGDEQFGGSD-NQFGDAE-NGNTENGPVGF-----DQTDD 289

[Close]

BLAST of CsGy1G002910 vs. ExPASy Swiss-Prot
Match: Q43472 (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.7e-20
Identity = 95/157 (60.51%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 76  KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 135
           + FVGG+ ++TDDQSL+ AF+KYG+VI++++I DRETGRSRGFGFVT+ S E    AI+A
Sbjct: 7   RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66

Query: 136 LDGQDLHGRRVRVNYANDRARGGGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGG 195
           ++GQDL GR + VN A  R   GGGG+GG   GGGGYGG    GGGGGYGGGGG G GGG
Sbjct: 67  MNGQDLDGRNITVNEAQSRRSDGGGGFGG---GGGGYGGQRREGGGGGYGGGGG-GYGGG 126

Query: 196 GAYGGGGYSG--GGAGGYGGYSGMGGGNYGGGSGGNF 231
            + GGGGY    GG GGYGG  G  GG+ GG  GGN+
Sbjct: 127 RSGGGGGYGSRDGGGGGYGGGGGGYGGSRGGSGGGNW 159

[Close]

BLAST of CsGy1G002910 vs. ExPASy Swiss-Prot
Match: P10979 (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays OX=4577 GN=RAB15 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-19
Identity = 88/156 (56.41%), Postives = 108/156 (69.23%), Query Frame = 0


Query: 76  KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 135
           + FVGG++++T ++SL  AF  YGE+++++VI DRETGRSRGFGFVT++S      AI+ 
Sbjct: 9   RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68

Query: 136 LDGQDLHGRRVRVNYANDRARGGGGGYGGGGYGGGGYGGG---GGYGGGGGYGGGGGYGA 195
           ++G++L GR + VN A  R  GGGGG  GGG GGGGYGGG   GGYGGGGGY   GG   
Sbjct: 69  MNGKELDGRNITVNQAQSRGGGGGGGGYGGGRGGGGYGGGRRDGGYGGGGGY---GGRRE 128

Query: 196 GGGGAYGGGGYSGGGAGGYGGYSGMGGGNYGGGSGG 229
           GGGG YGGG       GGYGG    GGG YGGG GG
Sbjct: 129 GGGGGYGGG-------GGYGGRREGGGGGYGGGGGG 154

[Close]

BLAST of CsGy1G002910 vs. ExPASy Swiss-Prot
Match: Q03250 (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-18
Identity = 98/176 (55.68%), Postives = 120/176 (68.18%), Query Frame = 0


Query: 76  KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 135
           + FVGG++++TDD++L  AF +YG+VI++++I DRETGRSRGFGFVT+   +    AI+ 
Sbjct: 9   RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68

Query: 136 LDGQDLHGRRVRVNYANDRARGGGGGYGGGGYGGGGYGGGGGY-GGGGGYGGGGGYGAGG 195
           ++GQDL GR + VN A  R  GGGGG+ GGG GG   GGGGGY GGGG YGGGGG   GG
Sbjct: 69  MNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGGGRREGG 128

Query: 196 GG-AYGGGGYS--GGGAGGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGG 248
           GG + GGGGYS  GGG G YGG    GGG YGGG GG +         G  GG GG
Sbjct: 129 GGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGY---------GGSGGGGG 175

[Close]

BLAST of CsGy1G002910 vs. NCBI nr
Match: XP_011648448.2 (glycine-rich RNA-binding protein blt801 [Cucumis sativus] >KAE8652435.1 hypothetical protein Csa_013177 [Cucumis sativus])

HSP 1 Score: 479 bits (1233), Expect = 2.09e-168
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 153 DRARGGGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGGAGGYG 212
           DRARGGGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGGAGGYG
Sbjct: 121 DRARGGGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGGAGGYG 180

Query: 213 GYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNAGF 272
           GYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNAGF
Sbjct: 181 GYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNAGF 240

Query: 273 GSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 319
           GSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA
Sbjct: 241 GSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 287

[Close]

BLAST of CsGy1G002910 vs. NCBI nr
Match: XP_008453280.1 (PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Cucumis melo] >KAA0057995.1 glycine-rich RNA-binding protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 392 bits (1008), Expect = 3.35e-134
Identity = 254/296 (85.81%), Postives = 262/296 (88.51%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSKFGNILRQGANKR+GLDLHRSSLSL QAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 153 D---RARGGGGGYGGGG--YGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGG 212
           D   R  GGGGGYGGGG  YGGGGYGGGGGYG GGGYG GGGYG  GGGAYGGGGYSGGG
Sbjct: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGG-GGGAYGGGGYSGGG 180

Query: 213 AGGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSE 272
           A          GGNYG GSGGN+SNDYASDNRGSVGGFGGNDAGYNAASNFA+GNTFGSE
Sbjct: 181 A----------GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSE 240

Query: 273 SNAGFGSS---DYFAKSEGE-QFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 319
           SNAGFGS    DYFA   GE QFGSNETN+M ASGE+ FEENARD DD++DFAKRA
Sbjct: 241 SNAGFGSGSGGDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 285

[Close]

BLAST of CsGy1G002910 vs. NCBI nr
Match: XP_038878732.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 327 bits (839), Expect = 5.82e-108
Identity = 239/330 (72.42%), Postives = 255/330 (77.27%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFL KFGNILRQGANKRIGLDL  SSLS+ QAVRWMSSM+SSK+FVGGIS++TDDQSLR
Sbjct: 1   MAFLGKFGNILRQGANKRIGLDLQASSLSICQAVRWMSSMQSSKLFVGGISYNTDDQSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAF KYGEV+EAR+IVDRETGRSRGFGFVT+TSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFAKYGEVLEARIIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 153 DRARG--GGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGGAGG 212
           DR RG  GGGGYGGG YGGGG    GGYGGGG YGGGGG G GGGG  GGGGYSGGGAGG
Sbjct: 121 DRTRGFGGGGGYGGGSYGGGG----GGYGGGG-YGGGGGDGYGGGGYGGGGGYSGGGAGG 180

Query: 213 YGG-------------YSGMG---GGNYGGGSGGNFSNDYASDNRGSVG----GFGGNDA 272
           YGG             YSG G   GGNY  GSGGN+SND ASDN GSVG    GFGGNDA
Sbjct: 181 YGGGGSGGGYGDGSGGYSGTGYSSGGNYSRGSGGNYSNDNASDNLGSVGTGGGGFGGNDA 240

Query: 273 GYNAASNFATGNTFGSESNAGFGS-----SDYFAKSE------------GEQFGSNETNT 319
           GYNAASNFA+GNT  S +NAGFG+     SDYFA S             GEQFGS ETNT
Sbjct: 241 GYNAASNFASGNTHDSGTNAGFGNVSGGGSDYFANSGFDASSGVGGYTGGEQFGS-ETNT 300

[Close]

BLAST of CsGy1G002910 vs. NCBI nr
Match: KAG6589603.1 (Glycine-rich RNA-binding protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306 bits (784), Expect = 1.79e-99
Identity = 227/326 (69.63%), Postives = 251/326 (76.99%), Query Frame = 0


Query: 30  CFKMAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQ 89
           CFKMAFLSK GNILRQGANKR GL+L   SLS+ QAVRWMSSM+SSKVF+GGIS+STDDQ
Sbjct: 12  CFKMAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQ 71

Query: 90  SLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVN 149
           SLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVN
Sbjct: 72  SLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVN 131

Query: 150 YANDRARG--------GGGGYGGGGYGGGGYG-GGGGYGGGGGYGGGGGYGAGGGGAYGG 209
           YANDR+RG        GGGGYGGGGYGGGG G GGGGYGGGGGYGGGG YG  GGG+YGG
Sbjct: 132 YANDRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGG-GGGSYGG 191

Query: 210 GGYSGGGAGGYGGYSGMGGGNYGGG--SGGNFSNDYASDNRGSVG--GFGGNDAGYNAAS 269
           G Y GG +GG GGY G  GG +G G  +G N+S+ + S ++GS G  G GGNDAG NAAS
Sbjct: 192 GAYGGGVSGG-GGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAAS 251

Query: 270 NFATGNTFGSESNAGF------GSSDYFAKSE------------GEQFGSNETNTMKASG 319
           NFA+GNTFGS ++A F      G  DYFA S             G+Q GSNE NT+ ASG
Sbjct: 252 NFASGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTLNASG 311

[Close]

BLAST of CsGy1G002910 vs. NCBI nr
Match: XP_022921902.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 300 bits (767), Expect = 3.59e-97
Identity = 225/318 (70.75%), Postives = 249/318 (78.30%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSK GNILRQGANKR GL+    SLS+ QAVRWMSSM+SSKVF+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNFQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 153 DRARG-GGGGYGGGG--YGGGGYGGGGG-YGGGGGYGGGGGYGAGGGGAYGGGGYSGGGA 212
           DR+RG GGGGYGGGG  YGGGGYGGGGG YGGGGG  GGG YG  GGG+YGGG Y GGG+
Sbjct: 121 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGGGYGGGSYGG-GGGSYGGGSYGGGGS 180

Query: 213 GGYGGYSGMGGGNYGGG--SGGNFSNDYASDNRGSVG--GFGGNDAGYNAASNFATGNTF 272
           GG GGY G  GG +G G  +G N+S+ + S ++GS G  G GGNDAG NAASNFA+GNTF
Sbjct: 181 GG-GGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASGNTF 240

Query: 273 GSESNAGF------GSSDYFAKSE------------GEQFGSNETNTMKASGE----DHF 319
           GS ++AGF      G  DYFA S             G+QFGSNE NT+ ASG+    +  
Sbjct: 241 GSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEANTLNASGDQGLGEQL 300

[Close]

BLAST of CsGy1G002910 vs. ExPASy TrEMBL
Match: A0A0A0LPA9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G013770 PE=4 SV=1)

HSP 1 Score: 470 bits (1209), Expect = 3.67e-165
Identity = 281/287 (97.91%), Postives = 281/287 (97.91%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 153 DRARGGGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGGAGGYG 212
           DRARGGGGGYGGGGYGGGGYGGGGGY      GGGGGYGAGGGGAYGGGGYSGGGAGGYG
Sbjct: 121 DRARGGGGGYGGGGYGGGGYGGGGGY------GGGGGYGAGGGGAYGGGGYSGGGAGGYG 180

Query: 213 GYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNAGF 272
           GYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNAGF
Sbjct: 181 GYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNAGF 240

Query: 273 GSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 319
           GSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA
Sbjct: 241 GSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 281

[Close]

BLAST of CsGy1G002910 vs. ExPASy TrEMBL
Match: A0A5A7UWK3 (Glycine-rich RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002990 PE=4 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 1.62e-134
Identity = 254/296 (85.81%), Postives = 262/296 (88.51%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSKFGNILRQGANKR+GLDLHRSSLSL QAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 153 D---RARGGGGGYGGGG--YGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGG 212
           D   R  GGGGGYGGGG  YGGGGYGGGGGYG GGGYG GGGYG  GGGAYGGGGYSGGG
Sbjct: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGG-GGGAYGGGGYSGGG 180

Query: 213 AGGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSE 272
           A          GGNYG GSGGN+SNDYASDNRGSVGGFGGNDAGYNAASNFA+GNTFGSE
Sbjct: 181 A----------GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSE 240

Query: 273 SNAGFGSS---DYFAKSEGE-QFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 319
           SNAGFGS    DYFA   GE QFGSNETN+M ASGE+ FEENARD DD++DFAKRA
Sbjct: 241 SNAGFGSGSGGDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 285

[Close]

BLAST of CsGy1G002910 vs. ExPASy TrEMBL
Match: A0A1S3BVW4 (glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494047 PE=4 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 1.62e-134
Identity = 254/296 (85.81%), Postives = 262/296 (88.51%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSKFGNILRQGANKR+GLDLHRSSLSL QAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 153 D---RARGGGGGYGGGG--YGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGG 212
           D   R  GGGGGYGGGG  YGGGGYGGGGGYG GGGYG GGGYG  GGGAYGGGGYSGGG
Sbjct: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGG-GGGAYGGGGYSGGG 180

Query: 213 AGGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSE 272
           A          GGNYG GSGGN+SNDYASDNRGSVGGFGGNDAGYNAASNFA+GNTFGSE
Sbjct: 181 A----------GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSE 240

Query: 273 SNAGFGSS---DYFAKSEGE-QFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 319
           SNAGFGS    DYFA   GE QFGSNETN+M ASGE+ FEENARD DD++DFAKRA
Sbjct: 241 SNAGFGSGSGGDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 285

[Close]

BLAST of CsGy1G002910 vs. ExPASy TrEMBL
Match: A0A6J1E1P2 (glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430026 PE=4 SV=1)

HSP 1 Score: 300 bits (767), Expect = 1.74e-97
Identity = 225/318 (70.75%), Postives = 249/318 (78.30%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSK GNILRQGANKR GL+    SLS+ QAVRWMSSM+SSKVF+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNFQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 153 DRARG-GGGGYGGGG--YGGGGYGGGGG-YGGGGGYGGGGGYGAGGGGAYGGGGYSGGGA 212
           DR+RG GGGGYGGGG  YGGGGYGGGGG YGGGGG  GGG YG  GGG+YGGG Y GGG+
Sbjct: 121 DRSRGMGGGGYGGGGGGYGGGGYGGGGGGYGGGGGGYGGGSYGG-GGGSYGGGSYGGGGS 180

Query: 213 GGYGGYSGMGGGNYGGG--SGGNFSNDYASDNRGSVG--GFGGNDAGYNAASNFATGNTF 272
           GG GGY G  GG +G G  +G N+S+ + S ++GS G  G GGNDAG NAASNFA+GNTF
Sbjct: 181 GG-GGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASGNTF 240

Query: 273 GSESNAGF------GSSDYFAKSE------------GEQFGSNETNTMKASGE----DHF 319
           GS ++AGF      G  DYFA S             G+QFGSNE NT+ ASG+    +  
Sbjct: 241 GSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEANTLNASGDQGLGEQL 300

[Close]

BLAST of CsGy1G002910 vs. ExPASy TrEMBL
Match: A0A6J1I7Z2 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470449 PE=4 SV=1)

HSP 1 Score: 291 bits (744), Expect = 4.76e-94
Identity = 222/323 (68.73%), Postives = 244/323 (75.54%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSK GNILRQGANK+IG DL  SSLS+ QAVRWMSSM+SSK+FVGGISFSTDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKKIGSDLQASSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEV+EAR+IVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 153 DRARG-GGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGGAGGY 212
           DR+RG GGGGYGGGG    GYGGGGGYGGGGGYGGGG YG GG G  G GGY GGG+GGY
Sbjct: 121 DRSRGVGGGGYGGGG----GYGGGGGYGGGGGYGGGG-YGGGGYGGGGPGGYGGGGSGGY 180

Query: 213 G---------GYSGMGGGNY----GGGS---GGNFSNDYASDNRGSV---GGFGGNDAGY 272
           G         GYS   GGNY    GGGS   GGN+ N++ASD+RGSV   GGFGGNDAGY
Sbjct: 181 GDGSGGFSTTGYSS--GGNYTNNFGGGSQGTGGNYGNEFASDSRGSVSTGGGFGGNDAGY 240

Query: 273 NAASNFATGNTFGSESNAGFGSSDYFAK------------SEGEQFGSNETNTMKASGE- 319
           NA SNF+ G++     N   G  DYF+             + G+QF S ET++M A G  
Sbjct: 241 NA-SNFSGGDS--GNYNVSGGGGDYFSNRGSEESSGFGGYTGGDQFSSKETDSMNAPGSG 300

[Close]

BLAST of CsGy1G002910 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 184.1 bits (466), Expect = 1.7e-46
Identity = 171/303 (56.44%), Postives = 198/303 (65.35%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSKFGNIL+Q  NK++   +  SS SL QA+R MS   SSK+F+GG+++S D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAFTKYGEV++ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 153 DRARG---GGGGY--GGGGYGG-GGYGGG-GGYGGGGGYGGG-GGYGAGGGGAYGG---G 212
           DR  G   GGGGY  GGGGYGG GGYGGG GGYGG GGYGGG GGYG   GG YGG   G
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGNAAG 180

Query: 213 GYSGGGAGGYG----GYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASN 272
           GY G GAGGYG    G+ G GGG    G  G+  N Y   +  S G  G     YN +S 
Sbjct: 181 GYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAVG----DYNGSSG 240

Query: 273 FATGNTFGSESNAGFGSSDYFAKS---EGEQFGSNETNTM---KASGEDHFEENARDEDD 315
           + + NT+GS SN GF     F  S      QFG + T      +  GED F    + E  
Sbjct: 241 YGSANTYGS-SNGGFAGDSQFGGSPVGNSSQFGGDNTQFTAGGQFGGEDQFGSMEKSETK 295

[Close]

BLAST of CsGy1G002910 vs. TAIR 10
Match: AT1G74230.1 (glycine-rich RNA-binding protein 5 )

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-29
Identity = 155/307 (50.49%), Postives = 188/307 (61.24%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAFLSK G +  Q ++         +S S+ Q++R MS   SSK+FVGGIS+STD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSH------VTASSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           EAF+KYGEV++A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 153 DRARG-GGGGYG--GGGYGG--GGYGG-GGGYGGG-GGYGGGGGY--GAGGGGAYGGGGY 212
           +R  G GG G+G  GGGYG   GGYG   GGYGGG GGYGG   Y   AGGGG YGG   
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSS 180

Query: 213 SGGGAGGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGND---------AGYN- 272
            GG AGGYGG     G   GGG GG  SN       G  GG GG++         AG++ 
Sbjct: 181 YGGNAGGYGGNPPYSGNAVGGG-GGYGSNFGGGGGYGVAGGVGGSENFAQGSSTNAGFDD 240

Query: 273 -AASNFATGNTFGSESNAGFGSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDS 320
              SN   GN    ++ +G G  + F  S+  QFG  E N    +G   F     D+ D 
Sbjct: 241 KFESNQPLGNDTDHQTESGLGGDEQFGGSD-NQFGDAE-NGNTENGPVGF-----DQTDD 289

[Close]

BLAST of CsGy1G002910 vs. TAIR 10
Match: AT4G13850.1 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-22
Identity = 89/176 (50.57%), Postives = 116/176 (65.91%), Query Frame = 0


Query: 33  MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 92
           MAF +K G +LRQ  +    + +     S+  ++R M    S+K+F+GG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 93  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 152
           +AF  +G+V++A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 153 DRARGGGGGYGGGGYGGGGYGGGGGY-GGGGGYGGGGGYGAGGGGAYGGGGYSGGG 208
           DR                 YGGGGGY GGGGGYGGGGG   GGGG YGGGG  GGG
Sbjct: 121 DRPS-----------APRAYGGGGGYSGGGGGYGGGGGGYGGGGGGYGGGGDGGGG 157

[Close]

BLAST of CsGy1G002910 vs. TAIR 10
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 94.0 bits (232), Expect = 2.4e-19
Identity = 98/176 (55.68%), Postives = 120/176 (68.18%), Query Frame = 0


Query: 76  KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 135
           + FVGG++++TDD++L  AF +YG+VI++++I DRETGRSRGFGFVT+   +    AI+ 
Sbjct: 9   RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68

Query: 136 LDGQDLHGRRVRVNYANDRARGGGGGYGGGGYGGGGYGGGGGY-GGGGGYGGGGGYGAGG 195
           ++GQDL GR + VN A  R  GGGGG+ GGG GG   GGGGGY GGGG YGGGGG   GG
Sbjct: 69  MNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGGGRREGG 128

Query: 196 GG-AYGGGGYS--GGGAGGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGG 248
           GG + GGGGYS  GGG G YGG    GGG YGGG GG +         G  GG GG
Sbjct: 129 GGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGY---------GGSGGGGG 175

[Close]

BLAST of CsGy1G002910 vs. TAIR 10
Match: AT2G21660.2 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-17
Identity = 86/150 (57.33%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 76  KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 135
           + FVGG++++TDD++L  AF +YG+VI++++I DRETGRSRGFGFVT+   +    AI+ 
Sbjct: 9   RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68

Query: 136 LDGQDLHGRRVRVNYANDRARGGGGGY-GGGGYGGGG---YGGGGGYGGGGGYG--GGGG 195
           ++GQDL GR + VN A  R  GGGGG+ GGG YGGGG    GGGG  GGGGGY   GGGG
Sbjct: 69  MNGQDLDGRSITVNEAQSRGSGGGGGHRGGGSYGGGGGRREGGGGYSGGGGGYSSRGGGG 128

Query: 196 YGAGGGGAYGGGGYSGGGAGGYGGYSGMGG 220
              GGG   GGGGY GG  GGYGG  G GG
Sbjct: 129 GSYGGGRREGGGGYGGGEGGGYGGSGGGGG 158

The following BLAST results are available for this feature:

BLAST of CsGy1G002910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNR1	2.5e-45	56.44	Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]
Q9C909	4.7e-28	50.49	Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]
Q43472	4.7e-20	60.51	Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=...	[more]
P10979	1.4e-19	56.41	Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays OX=4577 GN...	[more]
Q03250	3.4e-18	55.68	Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 ...	[more]

BLAST of CsGy1G002910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648448.2	2.09e-168	100.00	glycine-rich RNA-binding protein blt801 [Cucumis sativus] >KAE8652435.1 hypothet...	[more]
XP_008453280.1	3.35e-134	85.81	PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Cucumis melo]...	[more]
XP_038878732.1	5.82e-108	72.42	glycine-rich RNA-binding protein 3, mitochondrial-like [Benincasa hispida]	[more]
KAG6589603.1	1.79e-99	69.63	Glycine-rich RNA-binding protein 3, mitochondrial, partial [Cucurbita argyrosper...	[more]
XP_022921902.1	3.59e-97	70.75	glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita moschata]	[more]

BLAST of CsGy1G002910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPA9	3.67e-165	97.91	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G013770 PE=4 SV...	[more]
A0A5A7UWK3	1.62e-134	85.81	Glycine-rich RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BVW4	1.62e-134	85.81	glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucumis melo OX=3656 G...	[more]
A0A6J1E1P2	1.74e-97	70.75	glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucurbita moschata OX=...	[more]
A0A6J1I7Z2	4.76e-94	68.73	glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita m...	[more]

BLAST of CsGy1G002910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61030.1	1.7e-46	56.44	glycine-rich RNA-binding protein 3	[more]
AT1G74230.1	3.3e-29	50.49	glycine-rich RNA-binding protein 5	[more]
AT4G13850.1	2.3e-22	50.57	glycine-rich RNA-binding protein 2	[more]
AT2G21660.1	2.4e-19	55.68	cold, circadian rhythm, and rna binding 2	[more]
AT2G21660.2	1.3e-17	57.33	cold, circadian rhythm, and rna binding 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 76..149 e-value: 2.7E-30 score: 116.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 77..147 e-value: 3.1E-22 score: 78.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 75..153 score: 22.281914
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 61..191 e-value: 2.6E-34 score: 120.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..319
None	No IPR available	PANTHER	PTHR48027:SF9	GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL	coord: 33..188
None	No IPR available	PANTHER	PTHR48027	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	coord: 33..188
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 71..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G002910.2	CsGy1G002910.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding