CsGy1G002705 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G002705
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	F-box domain-containing protein
Location	Gy14Chr1: 1687691 .. 1688893 (+)
RNA-Seq Expression	CsGy1G002705
Synteny	CsGy1G002705

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTACGGATTGGGTTAGTGGGCTTCCATCCGATATTGGTAAGACAATCTTCTCCAAACTTCTTGTTTCCAATTTACCAGCTTGTAGAGTTGTATGTAAAGCTTGGAATGAGTTGATTTTAGATCATGCTTCCTCAGCTTCTAAATTCCTTACAAATGATTTCATTCTATTTACCTGTGATGTACTCCATCCCTTCCCCTGTCCTGATAATCATACCAATCCCAACATGCATTGTTTACGTTTTGATAATTTAGATTTGGATTTGGATTTGGATTTAGAATTGGAAGTGAATAAATCCTCCAGCTTTGAGGCCGGCGTCGTTTACAAACTCATTAATTCTTGCAATGGCCTCCTGCTTATCTACAAACTCCCTCTTTGTTTCCCCGGCGAATTCCTTTTGCGTGTCGGCATATTTAATCCAATGACCAATGAGTTCTTCCAAGTTCCTCATGATGAGATTGTTGAGTACCATTATGGGTTTGGTTTCATCCCTGCCACAAAGCAGTACAAATTATTTAGAGTCAACTTCCCGCTTAATGTACGGCCGGAAGAACCCAATTCTGTTTCTCACTTGGATGTTTTGACGTTTGGTAGAAGTGAAATCATCGACCCTAAACAATCCCAATGGAGACGTCTTTACTCCCTACCTGGTGGCGTCGAGAATCATGGTGCTCATGTGAATGGAGTTATCTATTGGTTGGGAGAAGGAAAAGAACAAAATGAGTATGTGGTGTATACTCTCGACGTTGAAACTGAAAAAATTCAATTAAGTGCTGTCTTGGAAGTTGTCAATCCCATGTGGATGTCTATACAACAATTTAATGGTACTGTTTATGCAGTTTTTCATATGGAAGAAGCAACTCAAGTGTGGAGGATGCAGGAGAAAAACTCATGGATTAGAGATTTTGTTATTGATGATTGCAACCTTACTCTCGTGAAAGCCTATGAAAATGGTGAGATGTTGTGTATGGTCAAACCAACCGTTTTTTGGTTGTATAATCCTTCAACCGGGAGTAAGAAGGTTCTATCACTCAGGAATGAGAAAAAGATATTTTTAGGCATTTGTCACCTAGAATTGAATTTTGGCTCTCTTCTAAACATTTTGGCCGGTGATGAGAGTGTTGATGAAGTTCTAATTAAGAGAAACAAAGCAAAGAGAAGCAGAAGCAAAGCAAAGAGAAGCAGAAGCCATGGATGA

mRNA sequence

ATGGAGATTACGGATTGGGTTAGTGGGCTTCCATCCGATATTGAATTGGAAGTGAATAAATCCTCCAGCTTTGAGGCCGGCGTCGTTTACAAACTCATTAATTCTTGCAATGGCCTCCTGCTTATCTACAAACTCCCTCTTTGTTTCCCCGGCGAATTCCTTTTGCGTGTCGGCATATTTAATCCAATGACCAATGAGTTCTTCCAAGTTCCTCATGATGAGATTGTTGAGTACCATTATGGGTTTGGTTTCATCCCTGCCACAAAGCAGTACAAATTATTTAGAGTCAACTTCCCGCTTAATGTACGGCCGGAAGAACCCAATTCTGTTTCTCACTTGGATGTTTTGACGTTTGGTAGAAGTGAAATCATCGACCCTAAACAATCCCAATGGAGACGTCTTTACTCCCTACCTGGTGGCGTCGAGAATCATGGTGCTCATGTGAATGGAGTTATCTATTGGTTGGGAGAAGGAAAAGAACAAAATGAGTATGTGGTGTATACTCTCGACGTTGAAACTGAAAAAATTCAATTAAGTGCTGTCTTGGAAGTTGTCAATCCCATGTGGATGTCTATACAACAATTTAATGGTACTGTTTATGCAGTTTTTCATATGGAAGAAGCAACTCAAGTGTGGAGGATGCAGGAGAAAAACTCATGGATTAGAGATTTTGTTATTGATGATTGCAACCTTACTCTCGTGAAAGCCTATGAAAATGGTGAGATGTTGTGTATGGTCAAACCAACCGTTTTTTGGTTGTATAATCCTTCAACCGGGAGTAAGAAGGTTCTATCACTCAGGAATGAGAAAAAGATATTTTTAGGCATTTGTCACCTAGAATTGAATTTTGGCTCTCTTCTAAACATTTTGGCCGGTGATGAGAGTGTTGATGAAGTTCTAATTAAGAGAAACAAAGCAAAGAGAAGCAGAAGCAAAGCAAAGAGAAGCAGAAGCCATGGATGA

Coding sequence (CDS)

ATGGAGATTACGGATTGGGTTAGTGGGCTTCCATCCGATATTGAATTGGAAGTGAATAAATCCTCCAGCTTTGAGGCCGGCGTCGTTTACAAACTCATTAATTCTTGCAATGGCCTCCTGCTTATCTACAAACTCCCTCTTTGTTTCCCCGGCGAATTCCTTTTGCGTGTCGGCATATTTAATCCAATGACCAATGAGTTCTTCCAAGTTCCTCATGATGAGATTGTTGAGTACCATTATGGGTTTGGTTTCATCCCTGCCACAAAGCAGTACAAATTATTTAGAGTCAACTTCCCGCTTAATGTACGGCCGGAAGAACCCAATTCTGTTTCTCACTTGGATGTTTTGACGTTTGGTAGAAGTGAAATCATCGACCCTAAACAATCCCAATGGAGACGTCTTTACTCCCTACCTGGTGGCGTCGAGAATCATGGTGCTCATGTGAATGGAGTTATCTATTGGTTGGGAGAAGGAAAAGAACAAAATGAGTATGTGGTGTATACTCTCGACGTTGAAACTGAAAAAATTCAATTAAGTGCTGTCTTGGAAGTTGTCAATCCCATGTGGATGTCTATACAACAATTTAATGGTACTGTTTATGCAGTTTTTCATATGGAAGAAGCAACTCAAGTGTGGAGGATGCAGGAGAAAAACTCATGGATTAGAGATTTTGTTATTGATGATTGCAACCTTACTCTCGTGAAAGCCTATGAAAATGGTGAGATGTTGTGTATGGTCAAACCAACCGTTTTTTGGTTGTATAATCCTTCAACCGGGAGTAAGAAGGTTCTATCACTCAGGAATGAGAAAAAGATATTTTTAGGCATTTGTCACCTAGAATTGAATTTTGGCTCTCTTCTAAACATTTTGGCCGGTGATGAGAGTGTTGATGAAGTTCTAATTAAGAGAAACAAAGCAAAGAGAAGCAGAAGCAAAGCAAAGAGAAGCAGAAGCCATGGATGA

Protein sequence

MEITDWVSGLPSDIELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG*

Homology

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BLAST of CsGy1G002705 vs. NCBI nr
Match: KAE8652429.1 (hypothetical protein Csa_013434 [Cucumis sativus])

HSP 1 Score: 654 bits (1687), Expect = 4.85e-237
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MEITDWVSGLPSDIELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIF 60
           MEITDWVSGLPSDIELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIF
Sbjct: 1   MEITDWVSGLPSDIELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIF 60

Query: 61  NPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGR 120
           NPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGR
Sbjct: 61  NPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGR 120

Query: 121 SEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSA 180
           SEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSA
Sbjct: 121 SEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSA 180

Query: 181 VLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENG 240
           VLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENG
Sbjct: 181 VLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENG 240

Query: 241 EMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVL 300
           EMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVL
Sbjct: 241 EMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVL 300

Query: 301 IKRNKAKRSRSKAKRSRSHG 320
           IKRNKAKRSRSKAKRSRSHG
Sbjct: 301 IKRNKAKRSRSKAKRSRSHG 320

[Close]

BLAST of CsGy1G002705 vs. NCBI nr
Match: XP_011660339.1 (putative F-box protein At1g32420 [Cucumis sativus])

HSP 1 Score: 629 bits (1621), Expect = 1.09e-225
Identity = 308/311 (99.04%), Postives = 309/311 (99.36%), Query Frame = 0


Query: 10  LPSDIELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQ 69
           L  D+ELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQ
Sbjct: 90  LDLDLELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQ 149

Query: 70  VPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQS 129
           VPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQS
Sbjct: 150 VPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQS 209

Query: 130 QWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSAVLEVVNPMW 189
           QWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSAVLEVVNPMW
Sbjct: 210 QWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSAVLEVVNPMW 269

Query: 190 MSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENGEMLCMVKPT 249
           MSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENGEMLCMVKPT
Sbjct: 270 MSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENGEMLCMVKPT 329

Query: 250 VFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVLIKRNKAKRS 309
           VFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVLIKRNKAKRS
Sbjct: 330 VFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVLIKRNKAKRS 389

Query: 310 RSKAKRSRSHG 320
           RSKAKRSRSHG
Sbjct: 390 RSKAKRSRSHG 400

[Close]

BLAST of CsGy1G002705 vs. NCBI nr
Match: XP_038890298.1 (F-box protein At3g07870-like [Benincasa hispida])

HSP 1 Score: 241 bits (616), Expect = 1.72e-73
Identity = 151/303 (49.83%), Postives = 197/303 (65.02%), Query Frame = 0


Query: 13  DIELEVNKSSS--FEAGVVYKLI-NSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQ 72
           D+E E  KSSS  F+    +  I N C+GLLLI     C    +    GIFNPMTNEF Q
Sbjct: 89  DLESEWTKSSSLCFDGEWTFMAIMNYCSGLLLI-----CKCANYTRCDGIFNPMTNEFLQ 148

Query: 73  VPHDEIVE--YHYGFGFIPATKQYKLFRV--NFPLNVRPEEPNSVSHLDVLTFGRSEIID 132
           VP  ++    Y++GFGF   TKQYKLFRV  +F  N   E   S S +DVLTF RS   +
Sbjct: 149 VPRGQLDNDIYYFGFGFTTTTKQYKLFRVCDSFSRNCEFE---SGSIMDVLTFSRSGT-N 208

Query: 133 PKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE-QNEYVVYTLDVETEKIQLSAVLEV 192
              +QWR L+ LP  + ++GA++NG IYW+G+ +E +NEY +Y LDVETEKI+LS VLE+
Sbjct: 209 ANHNQWRYLHYLPLDIHSNGAYLNGFIYWIGKEEEKENEYAIYVLDVETEKIELSIVLEI 268

Query: 193 VNPMWMS----IQQFNGTVYAVFHMEEAT----QVWRMQEKNSWIRDFVIDDCN-----L 252
             P+  S    +QQFN +VYA+F + + T    QVWRMQEK+ WIR+FV+DD       L
Sbjct: 269 CPPLCTSKVGGMQQFNDSVYAIFLINQPTGNSIQVWRMQEKDLWIREFVVDDIPNDWNVL 328

Query: 253 TLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNIL 293
           TL+KA+E+GE+LCMV    F  YNP TG KK+++ +NEKKI   +C ++ LNFG L NIL
Sbjct: 329 TLIKAFEDGEILCMVNFDFFCWYNPLTGRKKIIT-KNEKKIRY-VCQIQSLNFGYLPNIL 380

[Close]

BLAST of CsGy1G002705 vs. NCBI nr
Match: TYK24751.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (597), Expect = 1.70e-70
Identity = 149/310 (48.06%), Postives = 199/310 (64.19%), Query Frame = 0


Query: 10  LPSDIELEVNK--SSSFEA--GVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTN 69
           L  D+ELE  K  S SF+     +  + NSCNGL+ I K   C    F    GIFNPMTN
Sbjct: 100 LDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGLVFIRK---C--AFFSRSDGIFNPMTN 159

Query: 70  EFFQVPHDEIV--EYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEI 129
           EF QVP  E+    Y YG GF P TKQYK+FRVN      P   +S+ +  +LTF RSE 
Sbjct: 160 EFLQVPRHELDGDNYFYGLGFSPTTKQYKMFRVN------PNNNSSIMY--ILTFRRSET 219

Query: 130 IDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGK-EQNEYVVYTLDVETEKIQLSAVL 189
            + K +QWR+L+SLP  +   G ++NG IYW+G  + ++NEY +Y L+VETE+I+LSAVL
Sbjct: 220 -NYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEYTIYALNVETEQIELSAVL 279

Query: 190 EVVNPM------WMSIQQFNGTVYAVFHMEEAT-----QVWRMQEKNSWIRDFVIDD--- 249
            +  P        +S++QFNG+VYA F+++  T     QVWRMQEK+ WI++FVIDD   
Sbjct: 280 HL-GPFSTSSIPGVSLKQFNGSVYATFYIDPKTCNSVIQVWRMQEKDLWIKEFVIDDIPN 339

Query: 250 --CNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGS 295
             C+LTL+KA+E+GE+LCMV    F  YN  TG KK+++ +N+KK    +C +E LNFG 
Sbjct: 340 NWCSLTLIKAFEDGEILCMVNLDFFCWYNSFTGRKKIVT-KNQKKCRY-VCEIEYLNFGL 392

[Close]

BLAST of CsGy1G002705 vs. NCBI nr
Match: KAA0039746.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 231 bits (590), Expect = 1.65e-69
Identity = 146/309 (47.25%), Postives = 196/309 (63.43%), Query Frame = 0


Query: 10  LPSDIELEVNK--SSSFEA--GVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTN 69
           L  D+ELE  K  S SF+     +  + NSCNGL+ I K             GIFNPMTN
Sbjct: 97  LDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGLVFIRKCA-------FFSDGIFNPMTN 156

Query: 70  EFFQVPHDEIV--EYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEI 129
           EF QVP  E+    Y YG GF P TKQYK+FRVN      P   +S+ +  +LTF RSE 
Sbjct: 157 EFLQVPRHELDGDNYFYGLGFSPTTKQYKMFRVN------PNNNSSIMY--ILTFRRSET 216

Query: 130 IDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGK-EQNEYVVYTLDVETEKIQLSAVL 189
            + K +QWR+L+SLP  +   G ++NG IYW+G  + ++NEY +Y L+VETE+I+LSAVL
Sbjct: 217 -NYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEYTIYALNVETEQIELSAVL 276

Query: 190 EVVNPM------WMSIQQFNGTVYAVFHMEEAT-----QVWRMQEKNSWIRDFVIDD--- 249
            +  P        +S++QFNG+VYA F+++  T     QVWRMQEK+ WI++FVIDD   
Sbjct: 277 HL-GPFSTSSIPGVSLKQFNGSVYATFYIDPKTCNSVIQVWRMQEKDLWIKEFVIDDIPN 336

Query: 250 --CNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGS 294
             C+LTL+KA+E+GE+LCMV    F  YN  TG KK+++ +N+KK    +C +E LNFG 
Sbjct: 337 NWCSLTLIKAFEDGEILCMVNLDFFCWYNSFTGRKKIVT-KNQKKCRY-VCEIEYLNFGL 386

[Close]

BLAST of CsGy1G002705 vs. ExPASy TrEMBL
Match: A0A0A0LSE0 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011590 PE=4 SV=1)

HSP 1 Score: 629 bits (1621), Expect = 5.27e-226
Identity = 308/311 (99.04%), Postives = 309/311 (99.36%), Query Frame = 0


Query: 10  LPSDIELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQ 69
           L  D+ELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQ
Sbjct: 90  LDLDLELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQ 149

Query: 70  VPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQS 129
           VPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQS
Sbjct: 150 VPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQS 209

Query: 130 QWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSAVLEVVNPMW 189
           QWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSAVLEVVNPMW
Sbjct: 210 QWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSAVLEVVNPMW 269

Query: 190 MSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENGEMLCMVKPT 249
           MSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENGEMLCMVKPT
Sbjct: 270 MSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENGEMLCMVKPT 329

Query: 250 VFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVLIKRNKAKRS 309
           VFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVLIKRNKAKRS
Sbjct: 330 VFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVLIKRNKAKRS 389

Query: 310 RSKAKRSRSHG 320
           RSKAKRSRSHG
Sbjct: 390 RSKAKRSRSHG 400

[Close]

BLAST of CsGy1G002705 vs. ExPASy TrEMBL
Match: A0A5D3DMB7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 8.24e-71
Identity = 149/310 (48.06%), Postives = 199/310 (64.19%), Query Frame = 0


Query: 10  LPSDIELEVNK--SSSFEA--GVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTN 69
           L  D+ELE  K  S SF+     +  + NSCNGL+ I K   C    F    GIFNPMTN
Sbjct: 100 LDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGLVFIRK---C--AFFSRSDGIFNPMTN 159

Query: 70  EFFQVPHDEIV--EYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEI 129
           EF QVP  E+    Y YG GF P TKQYK+FRVN      P   +S+ +  +LTF RSE 
Sbjct: 160 EFLQVPRHELDGDNYFYGLGFSPTTKQYKMFRVN------PNNNSSIMY--ILTFRRSET 219

Query: 130 IDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGK-EQNEYVVYTLDVETEKIQLSAVL 189
            + K +QWR+L+SLP  +   G ++NG IYW+G  + ++NEY +Y L+VETE+I+LSAVL
Sbjct: 220 -NYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEYTIYALNVETEQIELSAVL 279

Query: 190 EVVNPM------WMSIQQFNGTVYAVFHMEEAT-----QVWRMQEKNSWIRDFVIDD--- 249
            +  P        +S++QFNG+VYA F+++  T     QVWRMQEK+ WI++FVIDD   
Sbjct: 280 HL-GPFSTSSIPGVSLKQFNGSVYATFYIDPKTCNSVIQVWRMQEKDLWIKEFVIDDIPN 339

Query: 250 --CNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGS 295
             C+LTL+KA+E+GE+LCMV    F  YN  TG KK+++ +N+KK    +C +E LNFG 
Sbjct: 340 NWCSLTLIKAFEDGEILCMVNLDFFCWYNSFTGRKKIVT-KNQKKCRY-VCEIEYLNFGL 392

[Close]

BLAST of CsGy1G002705 vs. ExPASy TrEMBL
Match: A0A5A7TCF3 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 8.00e-70
Identity = 146/309 (47.25%), Postives = 196/309 (63.43%), Query Frame = 0


Query: 10  LPSDIELEVNK--SSSFEA--GVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTN 69
           L  D+ELE  K  S SF+     +  + NSCNGL+ I K             GIFNPMTN
Sbjct: 97  LDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGLVFIRKCA-------FFSDGIFNPMTN 156

Query: 70  EFFQVPHDEIV--EYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEI 129
           EF QVP  E+    Y YG GF P TKQYK+FRVN      P   +S+ +  +LTF RSE 
Sbjct: 157 EFLQVPRHELDGDNYFYGLGFSPTTKQYKMFRVN------PNNNSSIMY--ILTFRRSET 216

Query: 130 IDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGK-EQNEYVVYTLDVETEKIQLSAVL 189
            + K +QWR+L+SLP  +   G ++NG IYW+G  + ++NEY +Y L+VETE+I+LSAVL
Sbjct: 217 -NYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEYTIYALNVETEQIELSAVL 276

Query: 190 EVVNPM------WMSIQQFNGTVYAVFHMEEAT-----QVWRMQEKNSWIRDFVIDD--- 249
            +  P        +S++QFNG+VYA F+++  T     QVWRMQEK+ WI++FVIDD   
Sbjct: 277 HL-GPFSTSSIPGVSLKQFNGSVYATFYIDPKTCNSVIQVWRMQEKDLWIKEFVIDDIPN 336

Query: 250 --CNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGS 294
             C+LTL+KA+E+GE+LCMV    F  YN  TG KK+++ +N+KK    +C +E LNFG 
Sbjct: 337 NWCSLTLIKAFEDGEILCMVNLDFFCWYNSFTGRKKIVT-KNQKKCRY-VCEIEYLNFGL 386

[Close]

BLAST of CsGy1G002705 vs. ExPASy TrEMBL
Match: A0A5A7TE00 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003130 PE=4 SV=1)

HSP 1 Score: 226 bits (576), Expect = 8.43e-68
Identity = 143/313 (45.69%), Postives = 191/313 (61.02%), Query Frame = 0


Query: 5   DWVSGLPSDIELE-VNKSSSFEAGVVYKLI----NSCNGLLLIYKLPLCFPGEFLLRVGI 64
           D  + L  D+E E   KS S      +  I    NSCNGL+ I     C    F    GI
Sbjct: 80  DTTTHLDFDLESEWTTKSPSLSFDGDWPFISLVDNSCNGLVFI-----CKCAFFTRCDGI 139

Query: 65  FNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLT 124
           FNPMTNEFFQ+P  E+    Y Y  GF P TKQYKLFRV     +  +  N+ S +DVLT
Sbjct: 140 FNPMTNEFFQIPRGELDGDIYSYELGFSPTTKQYKLFRVTESFFLDGDADNNSSIMDVLT 199

Query: 125 FGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE-QNEYVVYTLDVETEKI 184
           F R    +   SQWRRL+SLP  + N GA++NGVIYW+G  ++ +NEY++Y ++VETE I
Sbjct: 200 FTRRSETNHNHSQWRRLHSLPLRIHN-GAYLNGVIYWIGTKEDKENEYIIYAVNVETELI 259

Query: 185 QLSAVLEV---VNPMWMSIQQFNGTVYAVFHMEEAT-----QVWRMQEKNSWIRDFVIDD 244
           +LS +L++         S++QFN +VYA F +   T     QVWRMQEK+ WIR+FVI D
Sbjct: 260 ELSFILDLGPCSTSSHASLKQFNSSVYATFFINPKTYNSSIQVWRMQEKDLWIREFVIVD 319

Query: 245 C-----NLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE-LN 295
                 +LTL+KA+E+GE+LCM+    F  YN  TG KK+++ +N+KK    +C +E LN
Sbjct: 320 IPINWSSLTLIKAFEDGEILCMINLDFFCWYNSFTGRKKIVT-KNQKKD-RRVCQIEYLN 379

[Close]

BLAST of CsGy1G002705 vs. ExPASy TrEMBL
Match: A0A0A0LWG1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 216 bits (550), Expect = 1.23e-63
Identity = 140/309 (45.31%), Postives = 187/309 (60.52%), Query Frame = 0


Query: 13  DIELEVNKSSS--FEAGVVYKLI--NSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFF 72
           D+E E  KS+S  F+    Y +I   SCNGL+LI K   C   ++    GIFNPMTNEF 
Sbjct: 108 DLESEFIKSASLQFDGDWTYTIIMAGSCNGLMLISK---C--SDYTWCQGIFNPMTNEFL 167

Query: 73  QVPHDEIVE--YHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSV--SH--LDVLTFGRSE 132
           QV      +  Y YGFGF P TKQYKLFRV F    R    +S   +H  ++VLTFGRS 
Sbjct: 168 QVSEHGTFDDFYLYGFGFSPITKQYKLFRV-FDKGFRCRRTSSTVDTHYTMEVLTFGRSG 227

Query: 133 IID--PKQSQWRRLYSLPGGVENHGAHVNGVIYWL----GEGKEQNEYVVYTLDVETEKI 192
                P  +QWRRL++LP  +   G ++NG+IYWL    G+ KE+ +YV+Y LDVETE I
Sbjct: 228 TNHSIPIHNQWRRLHTLPFEIVADGVYLNGIIYWLVKEKGKDKEK-KYVIYALDVETEHI 287

Query: 193 QLSAVLEVVNPMWMSIQQFNGTVYAVFHME-----EATQVWRMQEKNSWIRDFVIDDCN- 252
           +++ VL+V +  +  I QFNGT+YA FH+         QVWRMQEK+SW+R FVI D + 
Sbjct: 288 EMTVVLQVPSNGYGKIHQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISR 347

Query: 253 ----LTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGS 294
               L L+K +E+ E+L M+    F  YNPS+  K+++S   +KK +  IC +E LNFG 
Sbjct: 348 EWIHLQLIKMFEDEEILFMINMDFFCFYNPSSKKKRIISKNQKKKRY--ICQIESLNFGR 407

[Close]

BLAST of CsGy1G002705 vs. TAIR 10
Match: AT1G47350.1 (F-box associated ubiquitination effector family protein )

HSP 1 Score: 52.8 bits (125), Expect = 6.1e-07
Identity = 57/231 (24.68%), Postives = 97/231 (41.99%), Query Frame = 0


Query: 61  NPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGR 120
           NP+T  +  +P   I  +   F F       K F+V F +   P  P+   H  VL  G 
Sbjct: 206 NPITGHYATLP--AIARFRQAFSFFGYDPIDKQFKVLFMIMAYPCSPD---HHKVLKLGS 265

Query: 121 SEIIDPKQSQWRRL-YSLPGGVENHGAHVNGVIYWLGEGKE-QNEYVVYTLDVETEKIQL 180
            E+       WRRL  +L   + + G  +NGV+Y+LG+  E    +VV   DV  E    
Sbjct: 266 GEM------SWRRLKRTLRHEIMSEGICINGVVYYLGDTSEVLTSFVVVCFDVRYETFSF 325

Query: 181 ---SAVLEVVNPMWMSIQQFNGTVYAVFHMEE-----ATQVWRM--QEKNSWIRDFVI-- 240
               +  E++N        + G +  VF+ +        ++W +  +EKN W +   +  
Sbjct: 326 LYPGSYCELIN--------YKGKLGLVFYDDYDGDTIKLRLWVLEDEEKNEWSKYAYVLW 385

Query: 241 DDCNL----TLVKAYENGEMLCMV------KPTVFWLYNPSTGSKKVLSLR 268
           DD  L    ++V     GE++  +      +P   + YNP   + + + +R
Sbjct: 386 DDIFLAHYVSVVGVTATGEIVLSMADYTSKQPFYIFYYNPEMNTLQCVEIR 417

The following BLAST results are available for this feature:

BLAST of CsGy1G002705 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G002705 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652429.1	4.85e-237	100.00	hypothetical protein Csa_013434 [Cucumis sativus]	[more]
XP_011660339.1	1.09e-225	99.04	putative F-box protein At1g32420 [Cucumis sativus]	[more]
XP_038890298.1	1.72e-73	49.83	F-box protein At3g07870-like [Benincasa hispida]	[more]
TYK24751.1	1.70e-70	48.06	F-box protein [Cucumis melo var. makuwa]	[more]
KAA0039746.1	1.65e-69	47.25	F-box protein [Cucumis melo var. makuwa]	[more]

BLAST of CsGy1G002705 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSE0	5.27e-226	99.04	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011590 PE=4 ...	[more]
A0A5D3DMB7	8.24e-71	48.06	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140...	[more]
A0A5A7TCF3	8.00e-70	47.25	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 ...	[more]
A0A5A7TE00	8.43e-68	45.69	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003130...	[more]
A0A0A0LWG1	1.23e-63	45.31	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 ...	[more]

BLAST of CsGy1G002705 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47350.1	6.1e-07	24.68	F-box associated ubiquitination effector family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 147..245 e-value: 2.7E-5 score: 24.1
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 35..231 e-value: 1.1E-17 score: 62.1
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 19..235
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 19..235
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 57..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G002705.1	CsGy1G002705.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane