CsGy1G002580 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G002580
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	HNH domain-containing protein
Location	Gy14Chr1: 1607091 .. 1609367 (-)
RNA-Seq Expression	CsGy1G002580
Synteny	CsGy1G002580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATGATCCAATGTCTTCAGTTTCTTCCATTTTTGTCTGCTGGACGGCGTCCCGACTCCGATGGAAGCTACTTCCAGTTCGCCGTCACCGACTCGTTCCCGCGGCGGGCAAAGAGATAGTGGCTCCGGAAGTGGGGACGAACGGCCAAGATTTTTCGACGCAAAAGCGAAAGCTAGTTGTTGGGCTAAGGCGGATGTTGTCCCTGGGCGGCATCCCGAGCGTTGGCGTAAGGACGCCGCTGGTAATGTCGTCTGTAAGCGCTTCTGTAACTGCCAGGGCTGCCTCTGTTTTGAGTATGATCACATTGTCCCTTACTCTAAAGGTAGTATGATTCTTTAGTCGACGATTGGTTTCTGATTCCGATTTGAGAAATTTTGCTTCTGCTGTTGAGTTCAGGGTTTAGTTTGGATTGTGATGAAATTTTTCGGCGACTGTTTGCAGGAGGCGAATCCACGGCGGATAATTGCCAGATTCTTCAGACGAGAGTAAACAGATTCAAATCGAACAAAGACGATGTTGATACGTCTGAGTTGAAAGGCTATTCGTGTGATGTCAAGTTTACTGGTACTTCTTCATCCTGCTCCAATTCTTTCTTTTGGTATTCATATTCTTCTATTTTTCATATCCATTTATTGGCTGGTAATCTATGAGCTGCCGATACCAAGTTACATAAAATCAGATTTACATATATCTCACTTTCTAGTTTCCGTACTGCCTATAATTTTTCGCAAATTCTTTCTGCCGTACTATTCAATGCAAGAACTTCTCAAATTCATGCTTGTTTAAGCTACGAGTAAACCATCCGTTTCGAATACCAAAGTAGTTCACCCTACTGTTGTTTTGTTATTGCAATTTCTCCCAGTAAAATATAACTTTTGGCATTGATCTCTTTTTCTTAGCTGCCCCATATGGCCAAATGTTCATCAGCTTTTACGTAATCATATGGTTTGTTGCTCAAAATCTGTAGTTTCTGTAAAGTTGCTCAGCCATACCGTGAGACAATTGATTGGCTGTTGTGCTTTTATTTAACTTTTGTTGGTACTTGATGACAATTTCGGGGAAAGTGATCTAGAAACATCATTACAGTTTCAGGAAAGTGCTAGAAAGTGAAGTTTCAATTGTTTTAGAAAGATCTGTTGTCCTGTCCCATATTAGCTGTCATTTCTGGTGGTAGTTTCTGATTAAAAATTTAAAACAAACGAGTTCTTGTATTTTAGGTCATCTGAAACTTTAAGTGATGAATCTCCGTAGGCTGCTGTCTAGAACTTCGAAGTATAAACTCACCTCCTTGAGGTTATGAATTCTAATATCTTATGAAAATTTCATTGAATGATGTAGTATAATTAAATTGCTGTGCATAAGCAGACAAGGGCACTCTCTGTGTATAAGATCGTCACCTCTTAGTTCATTGTGCTTTTCCCTTTGAAACCTGCTTTCATGCATCTCAAGAAAGTCACTTTGTTACCAACCCACCAAAGAAACTCCTTTGACATTTTTTTTTTTGTATAGAAACTATTTTCTCATGTAAGGGCGTACAAAAAAGAAAAAAAAACAAGCCTGCACCTACTGAATAGAATGTGCATAAAGAGTAATTACAAAATGTGTTTGAAATGGAAGGCTAAACATCAATTGGATATCTCTCCTCCACCTCTCCCTAACCACAGTTATTTCTCTACCTCATCAATCTCACATTTAATCGCACACCCAACATCTCAAAGCAAGCAATCATTCTCACCAAAAGACTGATGGAGAACTCGCTCCCCTATTGAACCACTAACGCTTGACCATCTCATGGTAGTCTATATTATAGAATCTGATTAAAACAGTTGATGCGTCAAGGTTTTTTCGCGTCTATCTCACATCCATATATGATGTATTTGGGTTTCATAATTCCTTGCAGATAAGGAGCTTGACATAATTGAAATGGCTGTTTACGGAGATGTAATCCGGCCAGGGAACCAATGTCGTTGTAGAACAGTTTCTGAAGTGCTTGGGCAATATAAATCTAAAGACCGTTTGGCCCCCTGCAAATTGCCATATAATGAAGAAGGTTCTTTGTAACAACAAAGAAGACTTGAAACTAAAGCATGTTTGCCCCATCTATAGTTTAATACGATTGATAAACATCATTTTAAGATTACATCAATTAGAATTGTGTGGACCTCCATTACTTGATTAGATCAATATGAATCAACATCGACCATCATTTTTTATTTATTATTATTAGGGTTTGCTTTCAAATATACTAAAATATTTATGCCAAAATTTCAGATCCTA

mRNA sequence

GAATGATCCAATGTCTTCAGTTTCTTCCATTTTTGTCTGCTGGACGGCGTCCCGACTCCGATGGAAGCTACTTCCAGTTCGCCGTCACCGACTCGTTCCCGCGGCGGGCAAAGAGATAGTGGCTCCGGAAGTGGGGACGAACGGCCAAGATTTTTCGACGCAAAAGCGAAAGCTAGTTGTTGGGCTAAGGCGGATGTTGTCCCTGGGCGGCATCCCGAGCGTTGGCGTAAGGACGCCGCTGGTAATGTCGTCTGTAAGCGCTTCTGTAACTGCCAGGGCTGCCTCTGTTTTGAGTATGATCACATTGTCCCTTACTCTAAAGGAGGCGAATCCACGGCGGATAATTGCCAGATTCTTCAGACGAGAGTAAACAGATTCAAATCGAACAAAGACGATGTTGATACGTCTGAGTTGAAAGGCTATTCGTGTGATGTCAAGTTTACTGATAAGGAGCTTGACATAATTGAAATGGCTGTTTACGGAGATGTAATCCGGCCAGGGAACCAATGTCGTTGTAGAACAGTTTCTGAAGTGCTTGGGCAATATAAATCTAAAGACCGTTTGGCCCCCTGCAAATTGCCATATAATGAAGAAGGTTCTTTGTAACAACAAAGAAGACTTGAAACTAAAGCATGTTTGCCCCATCTATAGTTTAATACGATTGATAAACATCATTTTAAGATTACATCAATTAGAATTGTGTGGACCTCCATTACTTGATTAGATCAATATGAATCAACATCGACCATCATTTTTTATTTATTATTATTAGGGTTTGCTTTCAAATATACTAAAATATTTATGCCAAAATTTCAGATCCTA

Coding sequence (CDS)

ATGGAAGCTACTTCCAGTTCGCCGTCACCGACTCGTTCCCGCGGCGGGCAAAGAGATAGTGGCTCCGGAAGTGGGGACGAACGGCCAAGATTTTTCGACGCAAAAGCGAAAGCTAGTTGTTGGGCTAAGGCGGATGTTGTCCCTGGGCGGCATCCCGAGCGTTGGCGTAAGGACGCCGCTGGTAATGTCGTCTGTAAGCGCTTCTGTAACTGCCAGGGCTGCCTCTGTTTTGAGTATGATCACATTGTCCCTTACTCTAAAGGAGGCGAATCCACGGCGGATAATTGCCAGATTCTTCAGACGAGAGTAAACAGATTCAAATCGAACAAAGACGATGTTGATACGTCTGAGTTGAAAGGCTATTCGTGTGATGTCAAGTTTACTGATAAGGAGCTTGACATAATTGAAATGGCTGTTTACGGAGATGTAATCCGGCCAGGGAACCAATGTCGTTGTAGAACAGTTTCTGAAGTGCTTGGGCAATATAAATCTAAAGACCGTTTGGCCCCCTGCAAATTGCCATATAATGAAGAAGGTTCTTTGTAA

Protein sequence

MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKGYSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEEGSL*

Homology

[Close]

BLAST of CsGy1G002580 vs. NCBI nr
Match: XP_004138181.1 (uncharacterized protein LOC101204599 [Cucumis sativus] >KAE8652425.1 hypothetical protein Csa_014117 [Cucumis sativus])

HSP 1 Score: 379 bits (973), Expect = 7.67e-133
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA
Sbjct: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG
Sbjct: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120

Query: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEEGS 180
           YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEEGS
Sbjct: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEEGS 180

[Close]

BLAST of CsGy1G002580 vs. NCBI nr
Match: XP_008453224.1 (PREDICTED: uncharacterized protein LOC103494011 isoform X2 [Cucumis melo] >KAA0057965.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 371 bits (952), Expect = 1.18e-129
Identity = 176/178 (98.88%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA
Sbjct: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG
Sbjct: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120

Query: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEE 178
           YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSE+LGQYKSKDRLAPCKLPYNE+
Sbjct: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYNED 178

[Close]

BLAST of CsGy1G002580 vs. NCBI nr
Match: XP_008453223.1 (PREDICTED: uncharacterized protein LOC103494011 isoform X1 [Cucumis melo])

HSP 1 Score: 365 bits (937), Expect = 2.64e-127
Identity = 176/182 (96.70%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA
Sbjct: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG
Sbjct: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120

Query: 121 YSCDVKFT----DKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYN 178
           YSCDVKFT    DKELDIIEMAVYGDVIRPGNQCRCRTVSE+LGQYKSKDRLAPCKLPYN
Sbjct: 121 YSCDVKFTGFLADKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYN 180

[Close]

BLAST of CsGy1G002580 vs. NCBI nr
Match: XP_038878253.1 (uncharacterized protein LOC120070538 [Benincasa hispida])

HSP 1 Score: 355 bits (912), Expect = 1.49e-123
Identity = 167/178 (93.82%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGG R SGSGSGDERPRFFD KAKA CW KADVVPGRHPERWRKDAA
Sbjct: 1   MEATSSSPSPTRSRGGHRHSGSGSGDERPRFFDTKAKAICWDKADVVPGRHPERWRKDAA 60

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSN++DVDTSELKG
Sbjct: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNRNDVDTSELKG 120

Query: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEE 178
           YSCD+KFTDKELDIIEMAVYGDVIRPGNQCRCRTVSE+LGQYK+KDRLAPCKLPYNE+
Sbjct: 121 YSCDIKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKAKDRLAPCKLPYNED 178

[Close]

BLAST of CsGy1G002580 vs. NCBI nr
Match: XP_023531696.1 (uncharacterized protein LOC111793864 [Cucurbita pepo subsp. pepo] >KAG6587563.1 hypothetical protein SDJN03_16128, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355 bits (910), Expect = 4.43e-123
Identity = 167/180 (92.78%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGG R SGSG+G+ERPRFFD KAKA CWAKAD VPGRHPERWRKDAA
Sbjct: 12  MEATSSSPSPTRSRGGPRQSGSGNGNERPRFFDTKAKAICWAKADTVPGRHPERWRKDAA 71

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVP+SKGGESTADNCQILQTRVNRFKS+KDDVDTS+LKG
Sbjct: 72  GNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFKSDKDDVDTSQLKG 131

Query: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEEGS 180
           YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSE+LGQYKSKDRLAPCKLPYNE+ S
Sbjct: 132 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYNEDSS 191

[Close]

BLAST of CsGy1G002580 vs. ExPASy TrEMBL
Match: A0A0A0LUK3 (HNHc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011480 PE=4 SV=1)

HSP 1 Score: 379 bits (973), Expect = 1.04e-132
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA
Sbjct: 30  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 89

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG
Sbjct: 90  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 149

Query: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEEGS 180
           YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEEGS
Sbjct: 150 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEEGS 209

[Close]

BLAST of CsGy1G002580 vs. ExPASy TrEMBL
Match: A0A5A7UWI1 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002690 PE=4 SV=1)

HSP 1 Score: 371 bits (952), Expect = 5.72e-130
Identity = 176/178 (98.88%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA
Sbjct: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG
Sbjct: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120

Query: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEE 178
           YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSE+LGQYKSKDRLAPCKLPYNE+
Sbjct: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYNED 178

[Close]

BLAST of CsGy1G002580 vs. ExPASy TrEMBL
Match: A0A1S3BVP6 (uncharacterized protein LOC103494011 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494011 PE=4 SV=1)

HSP 1 Score: 371 bits (952), Expect = 5.72e-130
Identity = 176/178 (98.88%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA
Sbjct: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG
Sbjct: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120

Query: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEE 178
           YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSE+LGQYKSKDRLAPCKLPYNE+
Sbjct: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYNED 178

[Close]

BLAST of CsGy1G002580 vs. ExPASy TrEMBL
Match: A0A1S3BVR0 (uncharacterized protein LOC103494011 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494011 PE=4 SV=1)

HSP 1 Score: 365 bits (937), Expect = 1.28e-127
Identity = 176/182 (96.70%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA
Sbjct: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG
Sbjct: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120

Query: 121 YSCDVKFT----DKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYN 178
           YSCDVKFT    DKELDIIEMAVYGDVIRPGNQCRCRTVSE+LGQYKSKDRLAPCKLPYN
Sbjct: 121 YSCDVKFTGFLADKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYN 180

[Close]

BLAST of CsGy1G002580 vs. ExPASy TrEMBL
Match: A0A6J1I7G1 (uncharacterized protein LOC111471509 OS=Cucurbita maxima OX=3661 GN=LOC111471509 PE=4 SV=1)

HSP 1 Score: 355 bits (910), Expect = 2.15e-123
Identity = 167/180 (92.78%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAA 60
           MEATSSSPSPTRSRGG R SGSG+G+ERPRFFD KAKA CWAKAD VPGRHPERWRKDAA
Sbjct: 12  MEATSSSPSPTRSRGGPRQSGSGNGNERPRFFDTKAKAICWAKADTVPGRHPERWRKDAA 71

Query: 61  GNVVCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKG 120
           GNVVCKRFCNCQGCLCFEYDHIVP+SKGGESTADNCQILQTRVNRFKS+KDDVDTS+LKG
Sbjct: 72  GNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFKSDKDDVDTSQLKG 131

Query: 121 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLPYNEEGS 180
           YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSE+LGQYKSKDRLAPCKLPYNE+ S
Sbjct: 132 YSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYNEDSS 191

[Close]

BLAST of CsGy1G002580 vs. TAIR 10
Match: AT1G18680.1 (HNH endonuclease domain-containing protein )

HSP 1 Score: 263.8 bits (673), Expect = 9.9e-71
Identity = 118/167 (70.66%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 8   PSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKR 67
           P P+      R +   +G+ERPRFFD KAK  CWA AD+VPGRHPERWRKD AGN+VCKR
Sbjct: 19  PPPSPPSSPSRSNVKSNGEERPRFFDGKAKNKCWANADIVPGRHPERWRKDVAGNIVCKR 78

Query: 68  FCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKGYSCDVKF 127
           F NC GCLCFEYDHIVPYSKGGES A+NCQILQTRVNRFKS +++VD + LK YSC ++F
Sbjct: 79  FGNCNGCLCFEYDHIVPYSKGGESIAENCQILQTRVNRFKSAQENVDATTLKSYSCGLQF 138

Query: 128 TDKELDIIEMAVYGDVIRPGNQCRCRTVSEVLGQYKSKDRLAPCKLP 175
           TDKELD+IEMAVYGDV+RPG +CRC+TV+E+LGQ KSKD  A C+LP
Sbjct: 139 TDKELDVIEMAVYGDVLRPGKECRCKTVAELLGQSKSKDGKAACELP 185

[Close]

BLAST of CsGy1G002580 vs. TAIR 10
Match: AT3G47490.1 (HNH endonuclease )

HSP 1 Score: 146.0 bits (367), Expect = 3.0e-35
Identity = 65/134 (48.51%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 20  SGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEY 79
           SG G  +  PR F    K  CW KA+ + GR PERWR+D  GN+V ++   C GCLC +Y
Sbjct: 99  SGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDY 158

Query: 80  DHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKGYSCDVKFTDKELDIIEMAV 139
           DHIVPYSKGG+ST +NCQ+LQ +VNR K NK D+  SEL   S   +   +++D+IE+  
Sbjct: 159 DHIVPYSKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSYCRVAGRDMDLIELTA 218

Query: 140 YGDVIRPGNQCRCR 154
           YG+V R      CR
Sbjct: 219 YGNVQRAPTSSGCR 232

[Close]

BLAST of CsGy1G002580 vs. TAIR 10
Match: AT3G47490.3 (HNH endonuclease )

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31
Identity = 65/154 (42.21%), Postives = 85/154 (55.19%), Query Frame = 0


Query: 20  SGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEY 79
           SG G  +  PR F    K  CW KA+ + GR PERWR+D  GN+V ++   C GCLC +Y
Sbjct: 60  SGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDY 119

Query: 80  DHIVPYS--------------------KGGESTADNCQILQTRVNRFKSNKDDVDTSELK 139
           DHIVPYS                    KGG+ST +NCQ+LQ +VNR K NK D+  SEL 
Sbjct: 120 DHIVPYSKDMCPLEHAFDEPHKDFLDLKGGKSTLENCQVLQAKVNRSKGNKTDISRSELI 179

Query: 140 GYSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCR 154
             S   +   +++D+IE+  YG+V R      CR
Sbjct: 180 QRSSYCRVAGRDMDLIELTAYGNVQRAPTSSGCR 213

[Close]

BLAST of CsGy1G002580 vs. TAIR 10
Match: AT3G47490.2 (HNH endonuclease )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 20  SGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEY 79
           SG G  +  PR F    K  CW KA+ + GR PERWR+D  GN+V ++   C GCLC +Y
Sbjct: 99  SGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDY 158

Query: 80  DHIVPYSK 88
           DHIVPYSK
Sbjct: 159 DHIVPYSK 166

The following BLAST results are available for this feature:

BLAST of CsGy1G002580 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G002580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138181.1	7.67e-133	100.00	uncharacterized protein LOC101204599 [Cucumis sativus] >KAE8652425.1 hypothetica...	[more]
XP_008453224.1	1.18e-129	98.88	PREDICTED: uncharacterized protein LOC103494011 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_008453223.1	2.64e-127	96.70	PREDICTED: uncharacterized protein LOC103494011 isoform X1 [Cucumis melo]	[more]
XP_038878253.1	1.49e-123	93.82	uncharacterized protein LOC120070538 [Benincasa hispida]	[more]
XP_023531696.1	4.43e-123	92.78	uncharacterized protein LOC111793864 [Cucurbita pepo subsp. pepo] >KAG6587563.1 ...	[more]

BLAST of CsGy1G002580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUK3	1.04e-132	100.00	HNHc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011480 PE=4 S...	[more]
A0A5A7UWI1	5.72e-130	98.88	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002...	[more]
A0A1S3BVP6	5.72e-130	98.88	uncharacterized protein LOC103494011 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BVR0	1.28e-127	96.70	uncharacterized protein LOC103494011 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1I7G1	2.15e-123	92.78	uncharacterized protein LOC111471509 OS=Cucurbita maxima OX=3661 GN=LOC111471509...	[more]

BLAST of CsGy1G002580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18680.1	9.9e-71	70.66	HNH endonuclease domain-containing protein	[more]
AT3G47490.1	3.0e-35	48.51	HNH endonuclease	[more]
AT3G47490.3	1.2e-31	42.21	HNH endonuclease	[more]
AT3G47490.2	1.3e-17	52.94	HNH endonuclease	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003615	HNH nuclease	SMART	SM00507	HNH_5	coord: 51..105 e-value: 0.0083 score: 25.3
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 66..105 e-value: 8.13505E-6 score: 39.7624
None	No IPR available	GENE3D	1.10.30.50		coord: 45..129 e-value: 6.5E-9 score: 37.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR33427:SF1	F6A14.21 PROTEIN	coord: 8..177
None	No IPR available	PANTHER	PTHR33427	HNH ENDONUCLEASE	coord: 8..177
IPR002711	HNH endonuclease	PFAM	PF01844	HNH	coord: 65..99 e-value: 3.7E-5 score: 23.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G002580.2	CsGy1G002580.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding