CsGy1G002400 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G002400
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Gy14Chr1: 1495970 .. 1498275 (-)
RNA-Seq Expression	CsGy1G002400
Synteny	CsGy1G002400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGTCGAGATTTCTTCTGATTGGAGGGCCAGTTGTCATAGTCCAATTGGCAAGTCATGATTCCACGTAGATATCGTATCTTTAGCAAAAGAAGACACGTCCACGTAGGACAAACGTGGCTCCACAACATCATCAATCAGCCAATGAAAACATAGAAACAGATTGAAGATATTACTCAAAGGATAAAGGGATAAGGTCCCATCGTTTCATTGTTGTAGTCCAAAACTCCAGACTGATATCTAGCCGTTAGATCGTGAAAATCTCCTAAATCAACCCTCAGATTTGAACAGCGAACAAGAACCACAAACTCAACATTGAAGTGAAGTTACAAAGCCTTGCAAATTAGTCCCCAAATACTTACTCCTGAAAACCCATTTTCTTCCTCAATCCAAAACATCATTCAGGAGAAATGGCCACTGTCACCACTCAAGCTTCTGCCGCCGTTTTCCGGCCATGTGCCGCCCGATCAAGATTCCTTTCCGGTTCTTCCGGTAAACTCCAACGTGTGCTCTCGGTTAAGCCAGTTTCTGCTTCTTCGTCTTCATCTTTCAAGGTTGAAGCCAAGAAAGGAGAATGGTTGCCTGGTCTCCCATCTCCGATGTATTTAAACGGCAGGTAATTTTCACCTCCCTAATTTACTTTGGGAATTTGTAAATTTGGGTTTTCTCTAATCCAATTGATTAATCGAAATTCAGTCTTCCCGGCGACAATGGATTTGACCCATTGGGATTAGCGGAAGACCCAGAGAATTTGAGGTGGTATGTACAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTTGGTGTCGCCGGAATGCTTCTACCGGAGGTTTTCACGAAGATTGGAATCATCAACGCCCCTCAATGGTACGACGCTGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTTGTAATCGAGTTTATCCTCTTCCATTACGTCGAAATCCGAAGATGGCAAGACATTAAAAACCCTGGCTGCGTTAACCAAGACCCCATTTTCAAGCAATACAGTTTACCCCCAAATGAATGTGGTTACCCTGGTGGGATTTTCAATCCCCTAAATTTCGCCCCAACTCTTGAAGCTAAAGAGAAGGAAATAGCCAATGGTAAGCGTCTTTGAATATGGTTGACTCTTAGTAACCTTCATGAATTCGAGATACTTTTACAGTTTCTTATCTGTGAATTGATGTGTTTTTGTTGTTTGGTATAGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATAGTGCAACACAATGTGACAGGGAAAGGGCCATTTGACAATCTTTTGCAGCACATCTCTGACCCATGGCACAACACCATTGTCCAGACATTTGGTGGCAACTAAATTTGGTTTGTTTGGAAGGTTGTTGTTGTTGTTGTTGTTGTATTAAGAGTAAAAATGGTTGATATGAAGTGAGATTCTTTTGAGAGTATGTTTTTGGAGTGTGTGTTGCTAATGGAATTTGTAATATCAACAACATAGTGGAATATCAGTGTACAGAGGGTGGAGGGGCTTGTCATTGTAGCTTGGATGTTGTTCTTTAAATGACATGAATTTGGCTCTTGCAGCTTCCTTCAACTTTCACATCTTTAATCATATCGACACTTTAATCACGAACTTGGGAATTTTACACTCAAGCTTAGTGTTATGAATTAGTTCTATGTTTGGAATGTGTAGATAAGAAATCTGATACAGATTTCTAGCCCACTTGAACTGAGACATTGTAATTTAAAAGAAAAGAAAGCAAGAAGTTGAAAATCCTTAAACAAAGGAAGTAATACATATTTGGCAAAGCAAACTTGGAAGTTTTCCTCGTGCTGGTAGAACATATGTATAAAACCTACTTAAAAGGCCAAATCTATTGTTGCACATGTTGATAAACTCAAAAGAGAGTTAGCAAAAATAGGAAGCTTAATTTGTAATTTTGTTGACTTATATATGGATATGATTAATTTAAGCAAGGCATTCTTGAACTCAATTTTGTTTGCCATTTCCTTTAAGGTCTTATTAGCCAACATCATACTCTCTTTGAAAGACCCCTTCTCCAAAGCATGCTCAAGGGAATATTACTAGTTAACCTTGTTCTTCTAACTAGTGAAATATAAAGTCCATATTCTTTTTACCGGATATCGTTTCAAACTGCATACTATTTATTTTAAGGAAGAATTTAGGTCGTCTTTTGGGCAAGTCGACTGCCATGCAGCACTTTTGGTTTTTGAAAACATATATTTTCTTTAAAAAATTTATTTGTGTGGTTAAAACGTGGGGAGTATGGTGGTTTGATGCATCTTATCATTG

mRNA sequence

GGAGTCGAGATTTCTTCTGATTGGAGGGCCAGTTGTCATAGTCCAATTGGCAAGTCATGATTCCACGTAGATATCGTATCTTTAGCAAAAGAAGACACGTCCACGTAGGACAAACGTGGCTCCACAACATCATCAATCAGCCAATGAAAACATAGAAACAGATTGAAGATATTACTCAAAGGATAAAGGGATAAGGTCCCATCGTTTCATTGTTGTAGTCCAAAACTCCAGACTGATATCTAGCCGTTAGATCGTGAAAATCTCCTAAATCAACCCTCAGATTTGAACAGCGAACAAGAACCACAAACTCAACATTGAAGTGAAGTTACAAAGCCTTGCAAATTAGTCCCCAAATACTTACTCCTGAAAACCCATTTTCTTCCTCAATCCAAAACATCATTCAGGAGAAATGGCCACTGTCACCACTCAAGCTTCTGCCGCCGTTTTCCGGCCATGTGCCGCCCGATCAAGATTCCTTTCCGGTTCTTCCGGTAAACTCCAACGTGTGCTCTCGGTTAAGCCAGTTTCTGCTTCTTCGTCTTCATCTTTCAAGGTTGAAGCCAAGAAAGGAGAATGGTTGCCTGGTCTCCCATCTCCGATGTATTTAAACGGCAGTCTTCCCGGCGACAATGGATTTGACCCATTGGGATTAGCGGAAGACCCAGAGAATTTGAGGTGGTATGTACAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTTGGTGTCGCCGGAATGCTTCTACCGGAGGTTTTCACGAAGATTGGAATCATCAACGCCCCTCAATGGTACGACGCTGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTTGTAATCGAGTTTATCCTCTTCCATTACGTCGAAATCCGAAGATGGCAAGACATTAAAAACCCTGGCTGCGTTAACCAAGACCCCATTTTCAAGCAATACAGTTTACCCCCAAATGAATGTGGTTACCCTGGTGGGATTTTCAATCCCCTAAATTTCGCCCCAACTCTTGAAGCTAAAGAGAAGGAAATAGCCAATGGTAAGCGTCTTTGAATATGGTTGACTCTTAGTAACCTTCATGAATTCGAGATACTTTTACAGTTTCTTATCTGTGAATTGATGTGTTTTTGTTGTTTGGTATAGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATAGTGCAACACAATGTGACAGGGAAAGGGCCATTTGACAATCTTTTGCAGCACATCTCTGACCCATGGCACAACACCATTGTCCAGACATTTGGTGGCAACTAAATTTGGTTTGTTTGGAAGGTTGTTGTTGTTGTTGTTGTTGTATTAAGAGTAAAAATGGTTGATATGAAGTGAGATTCTTTTGAGAGTATGTTTTTGGAGTGTGTGTTGCTAATGGAATTTGTAATATCAACAACATAGTGGAATATCAGTGTACAGAGGGTGGAGGGGCTTGTCATTGTAGCTTGGATGTTGTTCTTTAAATGACATGAATTTGGCTCTTGCAGCTTCCTTCAACTTTCACATCTTTAATCATATCGACACTTTAATCACGAACTTGGGAATTTTACACTCAAGCTTAGTGTTATGAATTAGTTCTATGTTTGGAATGTGTAGATAAGAAATCTGATACAGATTTCTAGCCCACTTGAACTGAGACATTGTAATTTAAAAGAAAAGAAAGCAAGAAGTTGAAAATCCTTAAACAAAGGAAGTAATACATATTTGGCAAAGCAAACTTGGAAGTTTTCCTCGTGCTGGTAGAACATATGTATAAAACCTACTTAAAAGGCCAAATCTATTGTTGCACATGTTGATAAACTCAAAAGAGAGTTAGCAAAAATAGGAAGCTTAATTTGTAATTTTGTTGACTTATATATGGATATGATTAATTTAAGCAAGGCATTCTTGAACTCAATTTTGTTTGCCATTTCCTTTAAGGTCTTATTAGCCAACATCATACTCTCTTTGAAAGACCCCTTCTCCAAAGCATGCTCAAGGGAATATTACTAGTTAACCTTGTTCTTCTAACTAGTGAAATATAAAGTCCATATTCTTTTTACCGGATATCGTTTCAAACTGCATACTATTTATTTTAAGGAAGAATTTAGGTCGTCTTTTGGGCAAGTCGACTGCCATGCAGCACTTTTGGTTTTTGAAAACATATATTTTCTTTAAAAAATTTATTTGTGTGGTTAAAACGTGGGGAGTATGGTGGTTTGATGCATCTTATCATTG

Coding sequence (CDS)

ATGGCCACTGTCACCACTCAAGCTTCTGCCGCCGTTTTCCGGCCATGTGCCGCCCGATCAAGATTCCTTTCCGGTTCTTCCGGTAAACTCCAACGTGTGCTCTCGGTTAAGCCAGTTTCTGCTTCTTCGTCTTCATCTTTCAAGGTTGAAGCCAAGAAAGGAGAATGGTTGCCTGGTCTCCCATCTCCGATGTATTTAAACGGCAGTCTTCCCGGCGACAATGGATTTGACCCATTGGGATTAGCGGAAGACCCAGAGAATTTGAGGTGGTATGTACAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTTGGTGTCGCCGGAATGCTTCTACCGGAGGTTTTCACGAAGATTGGAATCATCAACGCCCCTCAATGGTACGACGCTGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTTGTAATCGAGTTTATCCTCTTCCATTACGTCGAAATCCGAAGATGGCAAGACATTAAAAACCCTGGCTGCGTTAACCAAGACCCCATTTTCAAGCAATACAGTTTACCCCCAAATGAATGTGGTTACCCTGGTGGGATTTTCAATCCCCTAAATTTCGCCCCAACTCTTGAAGCTAAAGAGAAGGAAATAGCCAATGGTAAGCGTCTTTGA

Protein sequence

MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKEIANGKRL*

Homology

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BLAST of CsGy1G002400 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.2e-101
Identity = 178/209 (85.17%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAA+F PC  +SRFL GSSGKL R ++ +PV  S S+SFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
            SP YL GSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFT IGI
Sbjct: 61  ASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           IN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPG VNQDPIFKQYSLP  
Sbjct: 121 INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAG 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 210
           E GYPGGIFNPLNFAPTLEAKEKEIANG+
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGR 209

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BLAST of CsGy1G002400 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.3e-99
Identity = 173/210 (82.38%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPV-SASSSSSFKVEAKKGEWLPG 60
           MATVTT ASA++FRPC ++ RFL+GSSG+L R LS   + S++ +SSFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNGRWAMLGVAGMLLPEVFTKIG
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPP 180
           IIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NECGYPGGIFNPLNFAPTLEAKEKEIANGK 210
            E GYPGGIFNPLNFAPT EAKEKE+ANG+
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGR 210

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BLAST of CsGy1G002400 vs. ExPASy Swiss-Prot
Match: Q36718 (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-65
Identity = 117/158 (74.05%), Postives = 132/158 (83.54%), Query Frame = 0


Query: 53  KGEWLPGLPSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLP 112
           KG WLPGL SP YL+GSL GDNGFDPL LAEDPE+LRW+VQA++VNGRWAMLGVAGML+P
Sbjct: 33  KGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIP 92

Query: 113 EVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPI 172
           EV TK G++NAP+W    GK  YFASSST   +  +   YVEIRRWQDIKNPG VNQDPI
Sbjct: 93  EVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPI 152

Query: 173 FKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKEIANGK 210
           FK YSLPP+ECGYPG +FNPLNFAP LE KEKE+ANG+
Sbjct: 153 FKSYSLPPHECGYPGRVFNPLNFAP-LENKEKELANGR 188

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BLAST of CsGy1G002400 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.9e-49
Identity = 94/199 (47.24%), Postives = 126/199 (63.32%), Query Frame = 0


Query: 17  AARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPMYLNGSLPGDNGF 76
           A ++ FL G   ++ + ++     + + S+   +  +  W PG   P +L+GSLPGD GF
Sbjct: 29  ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGF 88

Query: 77  DPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFA 136
           DPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  TKIG++N P WY AG+ EYF 
Sbjct: 89  DPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT 148

Query: 137 SSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF- 196
            ++TLFVIE +L  + E RRW DI  PGCVN DPIF    L   + GYPGG+ F+PL + 
Sbjct: 149 DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208

Query: 197 ----APTLEAKEKEIANGK 210
               A   E + KEI NG+
Sbjct: 209 SGSPAKIKELRTKEIKNGR 227

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BLAST of CsGy1G002400 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.9e-49
Identity = 93/197 (47.21%), Postives = 126/197 (63.96%), Query Frame = 0


Query: 19  RSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPMYLNGSLPGDNGFDP 78
           ++ FL G   ++ +  +     ++++     +  +  W PG   P +L+GSLPGD GFDP
Sbjct: 31  KASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDP 90

Query: 79  LGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASS 138
           LGLA DPE+LRW  QAELV+ RWAMLG AG+ +PE+ TKIGI+N P WY AG+ EYF  +
Sbjct: 91  LGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDT 150

Query: 139 STLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF--- 198
           +TLF++E +L  + E RRW DI  PGCVN DPIF    L   + GYPGG+ F+PL +   
Sbjct: 151 TTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSG 210

Query: 199 --APTLEAKEKEIANGK 210
             A   E + KEI NG+
Sbjct: 211 SPAKIKELRTKEIKNGR 227

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BLAST of CsGy1G002400 vs. NCBI nr
Match: XP_004138171.1 (chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus] >KGN63677.1 hypothetical protein Csa_013519 [Cucumis sativus])

HSP 1 Score: 428 bits (1100), Expect = 1.44e-150
Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           ECGYPGGIFNPLNFAPTLEAKEKEIANG+
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGR 209

[Close]

BLAST of CsGy1G002400 vs. NCBI nr
Match: XP_008453211.1 (PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo] >KAA0057949.1 chlorophyll a-b binding protein P4 [Cucumis melo var. makuwa])

HSP 1 Score: 421 bits (1083), Expect = 5.62e-148
Identity = 204/209 (97.61%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKL RVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           ECGYPGGIFNPLNFAPTLEAKEKE+ANG+
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGR 209

[Close]

BLAST of CsGy1G002400 vs. NCBI nr
Match: XP_038880569.1 (chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida])

HSP 1 Score: 420 bits (1079), Expect = 2.29e-147
Identity = 204/209 (97.61%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKL R LSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           ECGYPGGIFNPLNFAPTLEAKEKEIANG+
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGR 209

[Close]

BLAST of CsGy1G002400 vs. NCBI nr
Match: WP_146130681.1 (hypothetical protein, partial [Acinetobacter baumannii] >PSD55579.1 hypothetical protein C7G65_19010, partial [Acinetobacter baumannii])

HSP 1 Score: 407 bits (1046), Expect = 2.63e-142
Identity = 193/209 (92.34%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCA+++RFL+GSSGKL R +S KP++++S+SSFKVEAKKGEWLPGL
Sbjct: 3   MATVTTQASAAVFRPCASKTRFLTGSSGKLNREVSFKPMASTSTSSFKVEAKKGEWLPGL 62

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 63  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 122

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 123 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 182

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           ECGYPGGIFNPLNFAPTLEAKEKE+ANG+
Sbjct: 183 ECGYPGGIFNPLNFAPTLEAKEKELANGR 211

[Close]

BLAST of CsGy1G002400 vs. NCBI nr
Match: XP_023516219.1 (chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405 bits (1042), Expect = 9.96e-142
Identity = 197/209 (94.26%), Postives = 203/209 (97.13%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFL+GSSGKL R+LSVKPV+ASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVAASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPL LAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           E GYPGGIFNPLNFAPT EAKEKE+ANG+
Sbjct: 181 EVGYPGGIFNPLNFAPTQEAKEKELANGR 209

[Close]

BLAST of CsGy1G002400 vs. ExPASy TrEMBL
Match: A0A0A0LSB4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G009810 PE=3 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 6.98e-151
Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           ECGYPGGIFNPLNFAPTLEAKEKEIANG+
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGR 209

[Close]

BLAST of CsGy1G002400 vs. ExPASy TrEMBL
Match: A0A5A7UWR2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002520 PE=3 SV=1)

HSP 1 Score: 421 bits (1083), Expect = 2.72e-148
Identity = 204/209 (97.61%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKL RVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           ECGYPGGIFNPLNFAPTLEAKEKE+ANG+
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGR 209

[Close]

BLAST of CsGy1G002400 vs. ExPASy TrEMBL
Match: A0A1S3BV45 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493999 PE=3 SV=1)

HSP 1 Score: 421 bits (1083), Expect = 2.72e-148
Identity = 204/209 (97.61%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKL RVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           ECGYPGGIFNPLNFAPTLEAKEKE+ANG+
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGR 209

[Close]

BLAST of CsGy1G002400 vs. ExPASy TrEMBL
Match: A0A0B0P3E7 (Chlorophyll a-b binding protein, chloroplastic OS=Gossypium arboreum OX=29729 GN=LOC108456585 PE=3 SV=1)

HSP 1 Score: 405 bits (1040), Expect = 9.73e-142
Identity = 193/209 (92.34%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCA+++RFL+GSSGKL R +S KPV+A+S+SSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCASKTRFLTGSSGKLNRDVSFKPVAATSTSSFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPP+
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPH 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           ECGYPG IFNPLNFAPTLEAKEKE+ANG+
Sbjct: 181 ECGYPGSIFNPLNFAPTLEAKEKELANGR 209

[Close]

BLAST of CsGy1G002400 vs. ExPASy TrEMBL
Match: A0A5D2PPR5 (Chlorophyll a-b binding protein, chloroplastic OS=Gossypium tomentosum OX=34277 GN=ES332_A07G077100v1 PE=3 SV=1)

HSP 1 Score: 405 bits (1040), Expect = 9.73e-142
Identity = 193/209 (92.34%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCA+++RFL+GSSGKL R +S KPV+A+S+SSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCASKTRFLTGSSGKLNRDVSFKPVAATSTSSFKVEAKKGEWLPGL 60

Query: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPP+
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPH 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGK 209
           ECGYPG IFNPLNFAPTLEAKEKE+ANG+
Sbjct: 181 ECGYPGSIFNPLNFAPTLEAKEKELANGR 209

[Close]

BLAST of CsGy1G002400 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 362.5 bits (929), Expect = 2.4e-100
Identity = 173/210 (82.38%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPV-SASSSSSFKVEAKKGEWLPG 60
           MATVTT ASA++FRPC ++ RFL+GSSG+L R LS   + S++ +SSFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNGRWAMLGVAGMLLPEVFTKIG
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPP 180
           IIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NECGYPGGIFNPLNFAPTLEAKEKEIANGK 210
            E GYPGGIFNPLNFAPT EAKEKE+ANG+
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGR 210

[Close]

BLAST of CsGy1G002400 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 195.3 bits (495), Expect = 5.0e-50
Identity = 102/212 (48.11%), Postives = 131/212 (61.79%), Query Frame = 0


Query: 6   TQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGE--WLPGLPSP 65
           + A AA+  P      FL G   +L++ L+V  VS   +S   V A      W PG   P
Sbjct: 8   SSAIAAISSP-----SFLGGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFPGSTPP 67

Query: 66  MYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINA 125
            +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG AG+ +PE  TKIGI+N 
Sbjct: 68  EWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNT 127

Query: 126 PQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECG 185
           P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PG VN DP+F    L   + G
Sbjct: 128 PSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVG 187

Query: 186 YPGGI-FNPLNF-----APTLEAKEKEIANGK 210
           YPGG+ F+PL +     A   E + KEI NG+
Sbjct: 188 YPGGLWFDPLGWGSGSPAKLKELRTKEIKNGR 214

[Close]

BLAST of CsGy1G002400 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 165.2 bits (417), Expect = 5.6e-41
Identity = 86/219 (39.27%), Postives = 124/219 (56.62%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSS--GKL--QRVLSVKPVSASSSSSFKVEAKKGEW 60
           + +  T +++ V  P   R    S SS  G+L  +R++ V+     SS    +   +  W
Sbjct: 9   LTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLW 68

Query: 61  LPGLPSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT 120
            PG   P +L+GSLPGD GFDPLGL  DP+ L+W+ QAEL++ RWAML V G+++PE   
Sbjct: 69  FPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLE 128

Query: 121 KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYS 180
           ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PG V+ +P +    
Sbjct: 129 RLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKV 188

Query: 181 LPPNECGYPGGIFNPLNF------APTLEAKEKEIANGK 210
            P  + GYPGG++            P +  + KEI NG+
Sbjct: 189 NPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGR 227

[Close]

BLAST of CsGy1G002400 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 161.8 bits (408), Expect = 6.2e-40
Identity = 88/193 (45.60%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 26  SSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPMYLNGSLPGDNGFDPLGLAEDP 85
           SS   +R+ SVK      + +  VE  +  WLPGL  P YL+G+L GD GFDPLGL EDP
Sbjct: 21  SSVITRRISSVKAAGGGINPTVAVE--RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDP 80

Query: 86  ENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVI 145
           E+L+WYVQAELV+ R+AMLGVAG+L  ++    GI N P WY+AG  ++ FAS+ TL V+
Sbjct: 81  ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVV 140

Query: 146 EFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA 205
           +F+L  + E +R+ D  +PG   ++  F    + +L   E GYPGG + NPL  A  ++ 
Sbjct: 141 QFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQN 200

Query: 206 ----KEKEIANGK 210
               K KEI NG+
Sbjct: 201 AHDWKLKEIKNGR 211

[Close]

BLAST of CsGy1G002400 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 161.8 bits (408), Expect = 6.2e-40
Identity = 88/193 (45.60%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 26  SSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPMYLNGSLPGDNGFDPLGLAEDP 85
           SS   +R+ SVK      + +  VE  +  WLPGL  P YL+G+L GD GFDPLGL EDP
Sbjct: 21  SSVITRRISSVKAAGGGINPTVAVE--RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDP 80

Query: 86  ENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVI 145
           E+L+WYVQAELV+ R+AMLGVAG+L  ++    GI N P WY+AG  ++ FAS+ TL V+
Sbjct: 81  ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVV 140

Query: 146 EFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA 205
           +F+L  + E +R+ D  +PG   ++  F    + +L   E GYPGG + NPL  A  ++ 
Sbjct: 141 QFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQN 200

Query: 206 ----KEKEIANGK 210
               K KEI NG+
Sbjct: 201 AHDWKLKEIKNGR 211

The following BLAST results are available for this feature:

BLAST of CsGy1G002400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQL2	1.2e-101	85.17	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
P27521	3.3e-99	82.38	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q36718	1.9e-65	74.05	Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulga...	[more]
P13869	1.9e-49	47.24	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
P10708	1.9e-49	47.21	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]

BLAST of CsGy1G002400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138171.1	1.44e-150	99.52	chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus] >KGN63677.1 ...	[more]
XP_008453211.1	5.62e-148	97.61	PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo] >KAA...	[more]
XP_038880569.1	2.29e-147	97.61	chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]	[more]
WP_146130681.1	2.63e-142	92.34	hypothetical protein, partial [Acinetobacter baumannii] >PSD55579.1 hypothetical...	[more]
XP_023516219.1	9.96e-142	94.26	chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G002400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSB4	6.98e-151	99.52	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5A7UWR2	2.72e-148	97.61	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BV45	2.72e-148	97.61	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0B0P3E7	9.73e-142	92.34	Chlorophyll a-b binding protein, chloroplastic OS=Gossypium arboreum OX=29729 GN...	[more]
A0A5D2PPR5	9.73e-142	92.34	Chlorophyll a-b binding protein, chloroplastic OS=Gossypium tomentosum OX=34277 ...	[more]

BLAST of CsGy1G002400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47470.1	2.4e-100	82.38	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT3G61470.1	5.0e-50	48.11	photosystem I light harvesting complex gene 2	[more]
AT1G19150.1	5.6e-41	39.27	photosystem I light harvesting complex gene 6	[more]
AT1G45474.1	6.2e-40	45.60	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	6.2e-40	45.60	photosystem I light harvesting complex gene 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 63..210 e-value: 1.2E-47 score: 164.3
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 63..208 e-value: 1.0E-37 score: 130.2
None	No IPR available	PANTHER	PTHR21649:SF109	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 1..209
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 53..209
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G002400.2	CsGy1G002400.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009409	response to cold
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009645	response to low light intensity stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding