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CsGy1G001965 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATATTTGAAATCACTTACATTTACAAAGTCACCTACACTTACGAAATCCGTTTAACAATTGATTTTACACTTTTGGATATGATCATATAAACATGACCACGTGGCTTATCTTTCTATCTTTCTCCTAATCATACTAACATGCAGTATTAAGATTAAGATATGCTTATTATTATCACTATTGTCCAAAGTGTTAATTTTTAACTTGGGTTTTTGGGTAGGATAGAAATTGAATTTATTTTTCAAATGTGATAAAATACAAACCATTTAATCTTAAGAATGAAAAAGAAAAACGAAAACAACAATAAATTCAGTGGTCAATTCAATAAAGGCCTGTGTCTGCAGAAGCAGCTTGCATGAGTAAAAGATTAGATTGACCATCAACAGTTCCATATCTCACCCACTCAACTTATCCACCCACCACCACCTTCATCACTACCATAGCTCTCACTTCCACAGCTCTCACTCCCACAAATCCATGGCTACTCATAATACAACTTCCTCATCCAAATCCATGGACCCCCACCTCAGAAACCAACCCCCCGACGCCGCCGTCGCCGTCGTCACTCCTGCCGTTGTCTCTCCCCACCCAACATCACCAAAACTAGATTCCCCAACCCCCTTGTCCGACTCAGACAACTTGTCAAAATCACGCCCACCTTCCCCTGTCGGCCCCAGAACAGAGCAAAAGGTAGCCAAAAATCCCAACGAAACCCCTCAAGAACACTCCACTACAGAGAAATTCAATGGTTCTGAAGAGAGATTTGAACATATGATCAACTGTATCACTGCCAAAGAAAGGGAAATGAAACAACTTTTAAAGGAACATGAACATCTCACTCGTAGACTTTCTGTTTCTCTTTCTTCATCACGTAGTGGAAGAAGAAGATCATTCTATGGCTCGCAGATTCAGTTAGGAGATGTGTTTGCTAAAAATGGAGTCAAAGTGGTTTCGGCCGATATGCCACCGTTTATGCAGATCCATGCCGTCGATTGCGCTAGAAAAGCACATGACAGTATGGAGAAGTTCACTTCCAAATCCCTTGCCCTGACTCTCAAGAAGGTACATACAAATCAATTAGTTCATTTTAGTTTTTCTTGTTCAAAATGTTCAATTGGGTTGGCTGATTTTGGCAGGAATTTGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTAACACATTCAGTGGGCGGATTTCTGTATTTTTCCATGGCTCAGAAGCTTTACATTCTTCTCTTCAAAACTACTGTACAAAGAGCCAATTAGAAATAATACTGAATAACCACTCTGTTTTTTGTTCAAACAGAACAAAGCTCTCTCTAATCTCCATCTTTTTCTCTATTTTGTGTTAATTTCGCCATTGTTGTTCATAATTAAGCTTACTGGTCTAGAACTGAAGGTGATATCTATGGAGATAAATGAAGATTAGAACGAGAGATTCATTTAGAGATGATGATGATGATAACTACTCTGTTTTATTCAAACAGAACAGAGCTCTCTGTAATCTCCATTTTCTTTTCTTCTGTTAAGTTCAAATTTCGCCATTGATGTTCATAACTGGCTTAACTGGTCAAGAACTGAAGGTAGTGGGTATGGCGATAATGGTGGGGAGTGATTTCTGCAGTAAATGAGGATTGAGAATTGAAGATTCATTTAGAGATGATGATAATGATTGCAGAGGCGAAAGGCCCACATCATTAATTTTGGGGTTTGGATTTATATTCTCTTCTTCTGTATTCGGGCACAAGGATGTGCAGATGATAAGATTTTTCTTTTCTTCTTTTTCTTTTTTGGTGAATTTGTTTGTTTATAGCTT CATATTTGAAATCACTTACATTTACAAAGTCACCTACACTTACGAAATCCGTTTAACAATTGATTTTACACTTTTGGATATGATCATATAAACATGACCACGTGGCTTATCTTTCTATCTTTCTCCTAATCATACTAACATGCAGTATTAAGATTAAGATATGCTTATTATTATCACTATTGTCCAAAGTGTTAATTTTTAACTTGGGTTTTTGGGTAGGATAGAAATTGAATTTATTTTTCAAATGTGATAAAATACAAACCATTTAATCTTAAGAATGAAAAAGAAAAACGAAAACAACAATAAATTCAGTGGTCAATTCAATAAAGGCCTGTGTCTGCAGAAGCAGCTTGCATGAGTAAAAGATTAGATTGACCATCAACAGTTCCATATCTCACCCACTCAACTTATCCACCCACCACCACCTTCATCACTACCATAGCTCTCACTTCCACAGCTCTCACTCCCACAAATCCATGGCTACTCATAATACAACTTCCTCATCCAAATCCATGGACCCCCACCTCAGAAACCAACCCCCCGACGCCGCCGTCGCCGTCGTCACTCCTGCCGTTGTCTCTCCCCACCCAACATCACCAAAACTAGATTCCCCAACCCCCTTGTCCGACTCAGACAACTTGTCAAAATCACGCCCACCTTCCCCTGTCGGCCCCAGAACAGAGCAAAAGGTAGCCAAAAATCCCAACGAAACCCCTCAAGAACACTCCACTACAGAGAAATTCAATGGTTCTGAAGAGAGATTTGAACATATGATCAACTGTATCACTGCCAAAGAAAGGGAAATGAAACAACTTTTAAAGGAACATGAACATCTCACTCGTAGACTTTCTGTTTCTCTTTCTTCATCACGTAGTGGAAGAAGAAGATCATTCTATGGCTCGCAGATTCAGTTAGGAGATGTGTTTGCTAAAAATGGAGTCAAAGTGGTTTCGGCCGATATGCCACCGTTTATGCAGATCCATGCCGTCGATTGCGCTAGAAAAGCACATGACAGTATGGAGAAGTTCACTTCCAAATCCCTTGCCCTGACTCTCAAGAAGGAATTTGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTAACACATTCAGTGGGCGGATTTCTGTATTTTTCCATGGCTCAGAAGCTTTACATTCTTCTCTTCAAAACTACTGTACAAAGAGCCAATTAGAAATAATACTGAATAACCACTCTGTTTTTTGTTCAAACAGAACAAAGCTCTCTCTAATCTCCATCTTTTTCTCTATTTTGTGTTAATTTCGCCATTGTTGTTCATAATTAAGCTTACTGGTCTAGAACTGAAGGTGATATCTATGGAGATAAATGAAGATTAGAACGAGAGATTCATTTAGAGATGATGATGATGATAACTACTCTGTTTTATTCAAACAGAACAGAGCTCTCTGTAATCTCCATTTTCTTTTCTTCTGTTAAGTTCAAATTTCGCCATTGATGTTCATAACTGGCTTAACTGGTCAAGAACTGAAGGTAGTGGGTATGGCGATAATGGTGGGGAGTGATTTCTGCAGTAAATGAGGATTGAGAATTGAAGATTCATTTAGAGATGATGATAATGATTGCAGAGGCGAAAGGCCCACATCATTAATTTTGGGGTTTGGATTTATATTCTCTTCTTCTGTATTCGGGCACAAGGATGTGCAGATGATAAGATTTTTCTTTTCTTCTTTTTCTTTTTTGGTGAATTTGTTTGTTTATAGCTT ATGGCTACTCATAATACAACTTCCTCATCCAAATCCATGGACCCCCACCTCAGAAACCAACCCCCCGACGCCGCCGTCGCCGTCGTCACTCCTGCCGTTGTCTCTCCCCACCCAACATCACCAAAACTAGATTCCCCAACCCCCTTGTCCGACTCAGACAACTTGTCAAAATCACGCCCACCTTCCCCTGTCGGCCCCAGAACAGAGCAAAAGGTAGCCAAAAATCCCAACGAAACCCCTCAAGAACACTCCACTACAGAGAAATTCAATGGTTCTGAAGAGAGATTTGAACATATGATCAACTGTATCACTGCCAAAGAAAGGGAAATGAAACAACTTTTAAAGGAACATGAACATCTCACTCGTAGACTTTCTGTTTCTCTTTCTTCATCACGTAGTGGAAGAAGAAGATCATTCTATGGCTCGCAGATTCAGTTAGGAGATGTGTTTGCTAAAAATGGAGTCAAAGTGGTTTCGGCCGATATGCCACCGTTTATGCAGATCCATGCCGTCGATTGCGCTAGAAAAGCACATGACAGTATGGAGAAGTTCACTTCCAAATCCCTTGCCCTGACTCTCAAGAAGGAATTTGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTAACACATTCAGTGGGCGGATTTCTGTATTTTTCCATGGCTCAGAAGCTTTACATTCTTCTCTTCAAAACTACTGTACAAAGAGCCAATTAG MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDSPTPLSDSDNLSKSRPPSPVGPRTEQKVAKNPNETPQEHSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHLTRRLSVSLSSSRSGRRRSFYGSQIQLGDVFAKNGVKVVSADMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKTTVQRAN* Homology
BLAST of CsGy1G001965 vs. ExPASy Swiss-Prot
Match: Q86A88 (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.9e-16 Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = 0
BLAST of CsGy1G001965 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15 Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of CsGy1G001965 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of CsGy1G001965 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of CsGy1G001965 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of CsGy1G001965 vs. NCBI nr
Match: XP_004138141.2 (uncharacterized protein LOC101215824 [Cucumis sativus] >KGN63633.1 hypothetical protein Csa_013893 [Cucumis sativus]) HSP 1 Score: 483 bits (1242), Expect = 1.09e-171 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CsGy1G001965 vs. NCBI nr
Match: XP_008453160.1 (PREDICTED: uncharacterized protein LOC103493957 [Cucumis melo] >KAA0057912.1 Dynein light chain, type 1/2 [Cucumis melo var. makuwa] >TYJ98600.1 Dynein light chain, type 1/2 [Cucumis melo var. makuwa]) HSP 1 Score: 468 bits (1205), Expect = 4.75e-166 Identity = 238/246 (96.75%), Postives = 241/246 (97.97%), Query Frame = 0
BLAST of CsGy1G001965 vs. NCBI nr
Match: XP_038879954.1 (uncharacterized protein LOC120071657 [Benincasa hispida]) HSP 1 Score: 421 bits (1083), Expect = 2.86e-147 Identity = 225/259 (86.87%), Postives = 229/259 (88.42%), Query Frame = 0
BLAST of CsGy1G001965 vs. NCBI nr
Match: KAG6589483.1 (Dynein light chain, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 390 bits (1003), Expect = 2.57e-135 Identity = 213/249 (85.54%), Postives = 220/249 (88.35%), Query Frame = 0
BLAST of CsGy1G001965 vs. NCBI nr
Match: XP_023516401.1 (uncharacterized protein LOC111780277 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 390 bits (1003), Expect = 2.76e-135 Identity = 213/249 (85.54%), Postives = 221/249 (88.76%), Query Frame = 0
BLAST of CsGy1G001965 vs. ExPASy TrEMBL
Match: A0A0A0LPA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G008410 PE=4 SV=1) HSP 1 Score: 483 bits (1242), Expect = 5.26e-172 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CsGy1G001965 vs. ExPASy TrEMBL
Match: A0A5A7UPX5 (Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002210 PE=4 SV=1) HSP 1 Score: 468 bits (1205), Expect = 2.30e-166 Identity = 238/246 (96.75%), Postives = 241/246 (97.97%), Query Frame = 0
BLAST of CsGy1G001965 vs. ExPASy TrEMBL
Match: A0A1S3BVI8 (uncharacterized protein LOC103493957 OS=Cucumis melo OX=3656 GN=LOC103493957 PE=4 SV=1) HSP 1 Score: 468 bits (1205), Expect = 2.30e-166 Identity = 238/246 (96.75%), Postives = 241/246 (97.97%), Query Frame = 0
BLAST of CsGy1G001965 vs. ExPASy TrEMBL
Match: A0A6J1E0M2 (uncharacterized protein LOC111429742 OS=Cucurbita moschata OX=3662 GN=LOC111429742 PE=4 SV=1) HSP 1 Score: 382 bits (981), Expect = 3.22e-132 Identity = 211/250 (84.40%), Postives = 218/250 (87.20%), Query Frame = 0
BLAST of CsGy1G001965 vs. ExPASy TrEMBL
Match: A0A6J1IBG1 (uncharacterized protein LOC111471403 OS=Cucurbita maxima OX=3661 GN=LOC111471403 PE=4 SV=1) HSP 1 Score: 365 bits (937), Expect = 4.15e-125 Identity = 198/264 (75.00%), Postives = 211/264 (79.92%), Query Frame = 0
BLAST of CsGy1G001965 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 129.0 bits (323), Expect = 5.2e-30 Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of CsGy1G001965 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 95.1 bits (235), Expect = 8.3e-20 Identity = 56/116 (48.28%), Postives = 71/116 (61.21%), Query Frame = 0
BLAST of CsGy1G001965 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 ) HSP 1 Score: 75.9 bits (185), Expect = 5.2e-14 Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of CsGy1G001965 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 75.5 bits (184), Expect = 6.8e-14 Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 0
BLAST of CsGy1G001965 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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