CsGy1G000890 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G000890
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	centromere protein X isoform X2
Location	Gy14Chr1: 516796 .. 518101 (+)
RNA-Seq Expression	CsGy1G000890
Synteny	CsGy1G000890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGTGTGGCTTTGGGCTGGGCCTCGCTTAAGCCCAAAAAAAGATGCGTGGCGCGGGACAATGTGAAAGATGCTCAAACGGATGCATATAAAAGGGTAAAACTAGCGGCAATTCGAAAACAGATCAAAACGCGTGGTGAGGGAACACGTCGAAATTTGAAACTTAAAAGTTGCGTCTTACAGACTTGCACTCCCCAGTTTCGATTCATCATGGAAGAGACCGGATTTCATCCTGTAATTCTCTTATCTTCATTCAAGTTCAATTCATCGTTTGATTGTTCAAATAGTCTGCTACGTCTATGTTTTCCTTTCAATTTGGCGTTTATGTGTATAATTCACAGGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGGTTAGAACTTTGGATCACCCTCTCCTTCTGTCTATCTATCTGTTTTCAGTTCTTCGTTCTCTCTTTCCTGATCATTTCTTCATTTTCAGAGCGCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTGGTTCCCTTTTCGTGAGTTTCTTGTGAAAATTTATTTTCAACTGCTATTGTTTGATATCTTTCGTGAAAATGTTTGTCATCGTTTTACGTTTTGATTTCACTGGCACCAGGTTTATCTTAGAATGCTCTTGGTACTTCTTGAGTTGATATGTAGTCTAGCGAATTTAACTAGAAATAAGTGATTATCTATTTTGTTGCAAATTTGGAGTAAGGCTTTTTCTCGACTAGACCAGTGGGGTTGATCTTCAGCGTACTTATCTTCGTCAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGGTATCTTTAGTTTTTACTTCAACAACTTACTATTATTTCATTTTTAAATTACTGTTTCTCTTAGGAGTGTTATTTTCCATCGAGCCGCTGTTATTTGAATGATTACTGTCTACTGGGAGATGTAGAAACTATTTCTGACCTCGCTGTTTTAATTTTCCATGCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTGTACAAATTTTTATCTCAGGTATCTGTGGTGAAACGTCAGATGGTTAGTTTAGTGTCTAATGTTTCCTTCTTCTTTTAGGTTAACTTTTCTATTTGTGCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCTTCCGCAGTTACTACTGGATTTTTAAGGTAGCTTTCCGTTTACACATTGCAATGTAAGTTCTTGTTTTATAGAGTGATTATTTGGAC

mRNA sequence

ATGGAGAGTGTGGCTTTGGGCTGGGCCTCGCTTAAGCCCAAAAAAAGATGCGTGGCGCGGGACAATGTGAAAGATGCTCAAACGGATGCATATAAAAGGGTAAAACTAGCGGCAATTCGAAAACAGATCAAAACGCGTGGTGAGGGAACACGTCGAAATTTGAAACTTAAAAGTTGCGTCTTACAGACTTGCACTCCCCAGTTTCGATTCATCATGGAAGAGACCGGATTTCATCCTGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTGTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCTTCCGCAGTTACTACTGGATTTTTAAGGTAGCTTTCCGTTTACACATTGCAATGTAAGTTCTTGTTTTATAGAGTGATTATTTGGAC

Coding sequence (CDS)

ATGGAGAGTGTGGCTTTGGGCTGGGCCTCGCTTAAGCCCAAAAAAAGATGCGTGGCGCGGGACAATGTGAAAGATGCTCAAACGGATGCATATAAAAGGGTAAAACTAGCGGCAATTCGAAAACAGATCAAAACGCGTGGTGAGGGAACACGTCGAAATTTGAAACTTAAAAGTTGCGTCTTACAGACTTGCACTCCCCAGTTTCGATTCATCATGGAAGAGACCGGATTTCATCCTGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTGTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCTTCCGCAGTTACTACTGGATTTTTAA

Protein sequence

MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF*

Homology

[Close]

BLAST of CsGy1G000890 vs. ExPASy Swiss-Prot
Match: Q8L7N3 (Protein MHF2 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF2 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-25
Identity = 65/102 (63.73%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 77  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSS 136
           F  DLIHAIFK  W+RR  ERE++    DA+D  E +   GT+KK+R  SANANALKLS 
Sbjct: 7   FDSDLIHAIFKHIWARRFRERERS----DAIDATEAEVALGTTKKNRLASANANALKLSC 66

Query: 137 KLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           +L++ F+SEAVQRAA IAEAEG+ +IE THLER+LPQLLLDF
Sbjct: 67  ELLKSFVSEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 104

[Close]

BLAST of CsGy1G000890 vs. ExPASy Swiss-Prot
Match: P0DJH7 (Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06
Identity = 25/51 (49.02%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 127 NANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           N +AL L ++L+++F+ EA  RAA  A+AE + +++  H+E+VLPQLLLDF
Sbjct: 29  NGDALLLMAELLKVFVREAAARAARQAQAEDLEKVDIEHVEKVLPQLLLDF 79

[Close]

BLAST of CsGy1G000890 vs. ExPASy Swiss-Prot
Match: Q2NKU0 (Centromere protein X OS=Bos taurus OX=9913 GN=CENPX PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 25/58 (43.10%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 120 KSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           K +    + +AL+L ++L++IF+ EA  R+   A+AEG++ ++   LE+VLPQLLLDF
Sbjct: 22  KDKKTKVSGDALQLVAELLKIFVVEAAIRSVRQAQAEGLAHVDVEQLEKVLPQLLLDF 79

[Close]

BLAST of CsGy1G000890 vs. ExPASy Swiss-Prot
Match: A8MT69 (Centromere protein X OS=Homo sapiens OX=9606 GN=CENPX PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.6e-04
Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 120 KSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           K      + +AL+L  +L+++F+ EA  R    A+AE   R++   LE+VLPQLLLDF
Sbjct: 24  KDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDVDQLEKVLPQLLLDF 81

[Close]

BLAST of CsGy1G000890 vs. ExPASy Swiss-Prot
Match: Q8C4X1 (Centromere protein X OS=Mus musculus OX=10090 GN=Cenpx PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.6e-04
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 127 NANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           + +AL+L ++ ++IF+ EA  R    A+AE +  +E   LE+VLPQLLLDF
Sbjct: 28  SGDALQLMAEFLRIFVLEAAVRGVWQAQAEDLDVVEVDQLEKVLPQLLLDF 78

[Close]

BLAST of CsGy1G000890 vs. NCBI nr
Match: XP_031736274.1 (protein MHF2 homolog isoform X2 [Cucumis sativus] >KGN63516.1 hypothetical protein Csa_013243 [Cucumis sativus])

HSP 1 Score: 346 bits (887), Expect = 7.38e-120
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60
           MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV
Sbjct: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60

Query: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK 120
           LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK
Sbjct: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK 120

Query: 121 SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177
           SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Sbjct: 121 SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177

[Close]

BLAST of CsGy1G000890 vs. NCBI nr
Match: XP_031736273.1 (protein MHF2 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 337 bits (863), Expect = 5.32e-116
Identity = 177/190 (93.16%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60
           MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV
Sbjct: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60

Query: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCE---------- 120
           LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCE          
Sbjct: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCETSGVDLQRTY 120

Query: 121 ---VDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLE 177
              VDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLE
Sbjct: 121 LRQVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLE 180

[Close]

BLAST of CsGy1G000890 vs. NCBI nr
Match: XP_008464489.1 (PREDICTED: centromere protein X isoform X2 [Cucumis melo])

HSP 1 Score: 200 bits (509), Expect = 2.64e-63
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNEN-PDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177
           KLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLPQLLLDF
Sbjct: 61  KLSSKLVQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPQLLLDF 105

[Close]

BLAST of CsGy1G000890 vs. NCBI nr
Match: TYJ98487.1 (centromere protein X isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 192 bits (489), Expect = 1.03e-59
Identity = 99/104 (95.19%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNEN-PDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLL 175
           KLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLPQ+++
Sbjct: 61  KLSSKLVQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPQVII 103

[Close]

BLAST of CsGy1G000890 vs. NCBI nr
Match: KAA0057803.1 (centromere protein X isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 190 bits (482), Expect = 8.61e-59
Identity = 99/105 (94.29%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNEN-PDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLD 176
           KLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLP  L +
Sbjct: 61  KLSSKLVQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPHKLAN 104

[Close]

BLAST of CsGy1G000890 vs. ExPASy TrEMBL
Match: A0A0A0LU58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002850 PE=3 SV=1)

HSP 1 Score: 346 bits (887), Expect = 3.57e-120
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60
           MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV
Sbjct: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60

Query: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK 120
           LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK
Sbjct: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK 120

Query: 121 SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177
           SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Sbjct: 121 SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177

[Close]

BLAST of CsGy1G000890 vs. ExPASy TrEMBL
Match: A0A1S3CLK5 (centromere protein X isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=1)

HSP 1 Score: 200 bits (509), Expect = 1.28e-63
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNEN-PDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177
           KLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLPQLLLDF
Sbjct: 61  KLSSKLVQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPQLLLDF 105

[Close]

BLAST of CsGy1G000890 vs. ExPASy TrEMBL
Match: A0A5D3BH88 (Centromere protein X isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00890 PE=3 SV=1)

HSP 1 Score: 192 bits (489), Expect = 4.97e-60
Identity = 99/104 (95.19%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNEN-PDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLL 175
           KLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLPQ+++
Sbjct: 61  KLSSKLVQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPQVII 103

[Close]

BLAST of CsGy1G000890 vs. ExPASy TrEMBL
Match: A0A5A7UPL0 (Centromere protein X isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00860 PE=3 SV=1)

HSP 1 Score: 190 bits (482), Expect = 4.17e-59
Identity = 99/105 (94.29%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNEN-PDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLD 176
           KLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLP  L +
Sbjct: 61  KLSSKLVQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPHKLAN 104

[Close]

BLAST of CsGy1G000890 vs. ExPASy TrEMBL
Match: A0A1S3CLJ8 (centromere protein X isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=1)

HSP 1 Score: 188 bits (477), Expect = 9.79e-59
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNEN PDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNEN-PDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFI-SEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177
           KLSSKLV   I +EAVQRAATIAEAEGI RIEPTHLERVLPQLLLDF
Sbjct: 61  KLSSKLVNFSICAEAVQRAATIAEAEGIGRIEPTHLERVLPQLLLDF 106

[Close]

BLAST of CsGy1G000890 vs. TAIR 10
Match: AT1G78790.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26
Identity = 65/102 (63.73%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 77  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSS 136
           F  DLIHAIFK  W+RR  ERE++    DA+D  E +   GT+KK+R  SANANALKLS 
Sbjct: 7   FDSDLIHAIFKHIWARRFRERERS----DAIDATEAEVALGTTKKNRLASANANALKLSC 66

Query: 137 KLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           +L++ F+SEAVQRAA IAEAEG+ +IE THLER+LPQLLLDF
Sbjct: 67  ELLKSFVSEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 104

[Close]

BLAST of CsGy1G000890 vs. TAIR 10
Match: AT1G78790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.7e-17
Identity = 53/102 (51.96%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 77  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSS 136
           F  DLIHAIFK  W+RR  ERE++    DA+D  E +   GT+KK+R             
Sbjct: 7   FDSDLIHAIFKHIWARRFRERERS----DAIDATEAEVALGTTKKNR------------- 66

Query: 137 KLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
                  SEAVQRAA IAEAEG+ +IE THLER+LPQLLLDF
Sbjct: 67  -----LASEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 86

The following BLAST results are available for this feature:

BLAST of CsGy1G000890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7N3	3.5e-25	63.73	Protein MHF2 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF2 PE=3 SV=1	[more]
P0DJH7	2.1e-06	49.02	Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1	[more]
Q2NKU0	1.4e-05	43.10	Centromere protein X OS=Bos taurus OX=9913 GN=CENPX PE=3 SV=1	[more]
A8MT69	7.6e-04	41.38	Centromere protein X OS=Homo sapiens OX=9606 GN=CENPX PE=1 SV=1	[more]
Q8C4X1	7.6e-04	45.10	Centromere protein X OS=Mus musculus OX=10090 GN=Cenpx PE=2 SV=1	[more]

BLAST of CsGy1G000890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736274.1	7.38e-120	100.00	protein MHF2 homolog isoform X2 [Cucumis sativus] >KGN63516.1 hypothetical prote...	[more]
XP_031736273.1	5.32e-116	93.16	protein MHF2 homolog isoform X1 [Cucumis sativus]	[more]
XP_008464489.1	2.64e-63	98.11	PREDICTED: centromere protein X isoform X2 [Cucumis melo]	[more]
TYJ98487.1	1.03e-59	95.19	centromere protein X isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0057803.1	8.61e-59	94.29	centromere protein X isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of CsGy1G000890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU58	3.57e-120	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002850 PE=3 SV=1	[more]
A0A1S3CLK5	1.28e-63	98.11	centromere protein X isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=...	[more]
A0A5D3BH88	4.97e-60	95.19	Centromere protein X isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UPL0	4.17e-59	94.29	Centromere protein X isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3CLJ8	9.79e-59	93.46	centromere protein X isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=...	[more]

BLAST of CsGy1G000890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78790.1	2.5e-26	63.73	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008...	[more]
AT1G78790.2	4.7e-17	51.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018552	Centromere protein X	PFAM	PF09415	CENP-X	coord: 124..177 e-value: 3.6E-14 score: 52.9
IPR018552	Centromere protein X	PANTHER	PTHR28680	CENTROMERE PROTEIN X	coord: 73..177
None	No IPR available	GENE3D	6.10.130.30		coord: 137..177 e-value: 1.8E-16 score: 62.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G000890.2	CsGy1G000890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0051382	kinetochore assembly
molecular_function	GO:0003677	DNA binding