
CsGy1G000540 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTACTCAAAGAAAAAAGAGAAAAGAAAAAAGAAAAAAAGAGAGAAAAAAAAAGGAAAACCAATCTCCCTTTTTATTTGTATCTTCAGAAATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCGACGTCCCACATATCGTCTCGTCCATCTGACTCCTCCTCGTTACGGTTCCGTTCCGATCCATTATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGTCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGCGGAGTGCTTGTTCAAGTATGAGGAGGTGATGAAGCCTGAGGCAGCGAGCTGTGTGGACGCGCTCAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAGAAAGCTGAAAGAATGAAAGAAAGAGCTACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATTATCTTTAATCATAATTTTACCTCATTAATTACCCCTTTCCATTTCCCTTAATTATCCAGAGTTTCTTTTAGTTAAATCTCTGCTTGGGTCTGTTTTCTTTTTTCTTTTTAATTAATCATTTAAATCAAGT TGTACTCAAAGAAAAAAGAGAAAAGAAAAAAGAAAAAAAGAGAGAAAAAAAAAGGAAAACCAATCTCCCTTTTTATTTGTATCTTCAGAAATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCGACGTCCCACATATCGTCTCGTCCATCTGACTCCTCCTCGTTACGGTTCCGTTCCGATCCATTATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGTCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGCGGAGTGCTTGTTCAAGTATGAGGAGGTGATGAAGCCTGAGGCAGCGAGCTGTGTGGACGCGCTCAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAGAAAGCTGAAAGAATGAAAGAAAGAGCTACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATTATCTTTAATCATAATTTTACCTCATTAATTACCCCTTTCCATTTCCCTTAATTATCCAGAGTTTCTTTTAGTTAAATCTCTGCTTGGGTCTGTTTTCTTTTTTCTTTTTAATTAATCATTTAAATCAAGT ATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCGACGTCCCACATATCGTCTCGTCCATCTGACTCCTCCTCGTTACGGTTCCGTTCCGATCCATTATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGTCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGCGGAGTGCTTGTTCAAGTATGAGGAGGTGATGAAGCCTGAGGCAGCGAGCTGTGTGGACGCGCTCAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAGAAAGCTGAAAGAATGAAAGAAAGAGCTACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAA MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISLRPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS* Homology
BLAST of CsGy1G000540 vs. ExPASy Swiss-Prot
Match: F4IPE3 (Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.8e-09 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of CsGy1G000540 vs. ExPASy Swiss-Prot
Match: Q9C9X7 (Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 9.5e-07 Identity = 28/63 (44.44%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of CsGy1G000540 vs. ExPASy Swiss-Prot
Match: Q9FRH4 (Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 9.5e-07 Identity = 29/68 (42.65%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of CsGy1G000540 vs. NCBI nr
Match: XP_004138047.1 (protein indeterminate-domain 16 [Cucumis sativus]) HSP 1 Score: 326 bits (835), Expect = 5.39e-112 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CsGy1G000540 vs. NCBI nr
Match: KAE8652381.1 (hypothetical protein Csa_014379 [Cucumis sativus]) HSP 1 Score: 315 bits (808), Expect = 2.07e-107 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of CsGy1G000540 vs. NCBI nr
Match: XP_008464429.1 (PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]) HSP 1 Score: 298 bits (764), Expect = 3.12e-101 Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of CsGy1G000540 vs. NCBI nr
Match: KAA0057771.1 (protein indeterminate-domain 16 [Cucumis melo var. makuwa]) HSP 1 Score: 297 bits (760), Expect = 1.27e-100 Identity = 168/175 (96.00%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of CsGy1G000540 vs. NCBI nr
Match: XP_038878928.1 (protein indeterminate-domain 16 [Benincasa hispida]) HSP 1 Score: 279 bits (714), Expect = 1.17e-93 Identity = 161/175 (92.00%), Postives = 163/175 (93.14%), Query Frame = 0
BLAST of CsGy1G000540 vs. ExPASy TrEMBL
Match: A0A0A0LRS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001530 PE=4 SV=1) HSP 1 Score: 326 bits (835), Expect = 2.61e-112 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CsGy1G000540 vs. ExPASy TrEMBL
Match: A0A5D3BFD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00530 PE=4 SV=1) HSP 1 Score: 298 bits (764), Expect = 1.51e-101 Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of CsGy1G000540 vs. ExPASy TrEMBL
Match: A0A1S3CN02 (protein indeterminate-domain 16 OS=Cucumis melo OX=3656 GN=LOC103502321 PE=4 SV=1) HSP 1 Score: 298 bits (764), Expect = 1.51e-101 Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of CsGy1G000540 vs. ExPASy TrEMBL
Match: A0A5A7UWD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00540 PE=4 SV=1) HSP 1 Score: 297 bits (760), Expect = 6.16e-101 Identity = 168/175 (96.00%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of CsGy1G000540 vs. ExPASy TrEMBL
Match: A0A6J1E4S8 (protein indeterminate-domain 16-like OS=Cucurbita moschata OX=3662 GN=LOC111429927 PE=4 SV=1) HSP 1 Score: 267 bits (683), Expect = 3.11e-89 Identity = 154/176 (87.50%), Postives = 164/176 (93.18%), Query Frame = 0
BLAST of CsGy1G000540 vs. TAIR 10
Match: AT3G48550.1 (BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 139.4 bits (350), Expect = 2.7e-33 Identity = 93/177 (52.54%), Postives = 117/177 (66.10%), Query Frame = 0
BLAST of CsGy1G000540 vs. TAIR 10
Match: AT2G01940.1 (C2H2-like zinc finger protein ) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of CsGy1G000540 vs. TAIR 10
Match: AT2G01940.2 (C2H2-like zinc finger protein ) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of CsGy1G000540 vs. TAIR 10
Match: AT2G01940.3 (C2H2-like zinc finger protein ) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of CsGy1G000540 vs. TAIR 10
Match: AT1G25250.1 (indeterminate(ID)-domain 16 ) HSP 1 Score: 55.1 bits (131), Expect = 6.7e-08 Identity = 29/68 (42.65%), Postives = 49/68 (72.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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