CsGy1G000280 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G000280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	exosome complex component RRP4 homolog
Location	Gy14Chr1: 151223 .. 152267 (-)
RNA-Seq Expression	CsGy1G000280
Synteny	CsGy1G000280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGTCTACAGATTTTCTTGAATCATACACAGGAGACTCAAAACGCTTGAGTGACTCTCATCAAATGCTAATTCTGATGCTTCAGGTGCAGTTTCTGACACTCTTCCTCTCAATTACAAGGATGGCGTTCTCAAGTATATAATTTCTCACTATCCTTATATAATAAAAGTTTGGTTTGTTGTTGTGTACTTGCCGGGGGATTATATGCATTGAGGTATAACTGAAATTTGTATAAAGGGGACATGGGACTCTTGACTTGAATGGAGAAGTAGTCACCACTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTTATCTATGTACGTGCCTTACGTGCCATGTTGTCCATGAAATCTTGTAATTTGGTTTATCTGGATGATAGCTTAATGTTTTCCTTTCTTCGTTGTATCGTTATTATATCTTCTCTGATGTAATTGTGTATACTGGATGTTAGATATGAACCAGAGATTGGTGATATCGTTGCGGGACGTGTTACAGAGGTAAAGCTAAATGCTTTTTATTAGTTTTTTTGGTTTTATGAAAATATAATATAATAATGGTGAGTAAAATAGCCAGGATACTTCCATTTGGGAGTCACGGTTAAGATGTTCTATATAGGAAAAATGTGTTAGAATGCCTCCCACCACCCCATTTTTTTCTTATCATTTGATGGGATCTTATTCAGGTTGCTCCAAAACGTTGGAGATTGGATATACATTTTAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTTTTCAGGTATTAGAGAATTCCCTTTCGTTATGGAAATAATGGTGCATACTGTTGCACCAGAGGGTGAATCATTGATGCCTTCTGTTGAACTTTACAGAAAATTTAACTGCAATTTTGATTCAACTGATCTTCCTCTTCTTCCTTTTTTTTTTTTTTCTCTAAAGAGTGGTTGCATTTGTTGTAACTATGGATTGATTGTGTTATTTTTATTTCTAGAGGAGGCGAACTGCAGTTGATGAACTCAACATTGCAGAGCATTTTTTAAGAAAATGA

mRNA sequence

ATGAGAGGTGCAGTTTCTGACACTCTTCCTCTCAATTACAAGGATGGCGTTCTCAAATATGAACCAGAGATTGGTGATATCGTTGCGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGATATACATTTTAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTTTTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATTGCAGAGCATTTTTTAAGAAAATGA

Coding sequence (CDS)

ATGAGAGGTGCAGTTTCTGACACTCTTCCTCTCAATTACAAGGATGGCGTTCTCAAATATGAACCAGAGATTGGTGATATCGTTGCGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGATATACATTTTAGCCAAGATGCTGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTTTTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATTGCAGAGCATTTTTTAAGAAAATGA

Protein sequence

MRGAVSDTLPLNYKDGVLKYEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEHFLRK*

Homology

[Close]

BLAST of CsGy1G000280 vs. ExPASy Swiss-Prot
Match: Q9ZVT7 (Exosome complex component RRP4 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP4 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.6e-20
Identity = 42/62 (67.74%), Postives = 54/62 (87.10%), Query Frame = 0


Query: 19  KYEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEH 78
           +Y+PE+GDIV GRV EVA KRWR++++F+QD VLMLSSMN+PDG QRRRT+VDELN+   
Sbjct: 88  RYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLMLSSMNMPDGIQRRRTSVDELNMRNI 147

Query: 79  FL 81
           F+
Sbjct: 148 FV 149

[Close]

BLAST of CsGy1G000280 vs. ExPASy Swiss-Prot
Match: Q09704 (Exosome complex component rrp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp4 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.5e-15
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 19  KYEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEH 78
           KY PEIGD++ G++ EV PKRW++DI   Q+AVLMLSS+NLP G QRR+   DEL +   
Sbjct: 106 KYVPEIGDLIIGKIAEVQPKRWKVDIGAKQNAVLMLSSINLPGGIQRRKLETDELQMRSF 165

Query: 79  F 80
           F
Sbjct: 166 F 166

[Close]

BLAST of CsGy1G000280 vs. ExPASy Swiss-Prot
Match: Q2KID0 (Exosome complex component RRP4 OS=Bos taurus OX=9913 GN=EXOSC2 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.0e-12
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 19  KYEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDEL 74
           +Y  E+GDIV GR+TEV  KRW+++ +   D+VL+LSSMNLP G  RRR+A DEL
Sbjct: 75  RYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDEL 129

[Close]

BLAST of CsGy1G000280 vs. ExPASy Swiss-Prot
Match: Q8VBV3 (Exosome complex component RRP4 OS=Mus musculus OX=10090 GN=Exosc2 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.0e-12
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 19  KYEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDEL 74
           +Y  E+GDIV GR+TEV  KRW+++ +   D+VL+LSSMNLP G  RRR+A DEL
Sbjct: 75  RYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDEL 129

[Close]

BLAST of CsGy1G000280 vs. ExPASy Swiss-Prot
Match: Q13868 (Exosome complex component RRP4 OS=Homo sapiens OX=9606 GN=EXOSC2 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 19  KYEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDEL 74
           +Y  E+GDIV GR+TEV  KRW+++ +   D+VL+LSSMNLP G  RRR+A DEL
Sbjct: 75  RYIGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDEL 129

[Close]

BLAST of CsGy1G000280 vs. NCBI nr
Match: KAE8652375.1 (hypothetical protein Csa_013704 [Cucumis sativus])

HSP 1 Score: 140 bits (352), Expect = 1.80e-40
Identity = 82/146 (56.16%), Postives = 82/146 (56.16%), Query Frame = 0


Query: 1   MRGAVSDTLPLNYKDGVLK----------------------------------------- 60
           MRGAVSDTLPLNYKDGVLK                                         
Sbjct: 1   MRGAVSDTLPLNYKDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRALRAMLSMKSCN 60

Query: 61  -----------------------YEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSS 82
                                  YEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSS
Sbjct: 61  LVYLDDSLMFSFLRCIVIISSLIYEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSS 120

[Close]

BLAST of CsGy1G000280 vs. NCBI nr
Match: XP_017187017.2 (exosome complex component RRP4 homolog isoform X2 [Malus domestica])

HSP 1 Score: 120 bits (302), Expect = 2.83e-31
Identity = 53/75 (70.67%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 5   VSDTLPLNYKDGVLKYEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQ 64
           V+D++P+NY+DG+LKY+PE+GDI+ GRV EVAPKRWR++I++S DAVLMLSSMNLPDG Q
Sbjct: 38  VADSIPVNYEDGLLKYKPEVGDIIVGRVIEVAPKRWRVEINYSHDAVLMLSSMNLPDGIQ 97

Query: 65  RRRTAVDELNIAEHF 79
           RRRTA+DELN+   F
Sbjct: 98  RRRTALDELNMRSIF 112

[Close]

BLAST of CsGy1G000280 vs. NCBI nr
Match: KAA8543196.1 (hypothetical protein F0562_021309 [Nyssa sinensis])

HSP 1 Score: 112 bits (281), Expect = 1.70e-29
Identity = 61/109 (55.96%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 5   VSDTLPLNYKDGVLK----------------------------------YEPEIGDIVAG 64
           V+DT+P+NY+DGVLK                                  Y+PEIGDIV G
Sbjct: 38  VADTIPVNYEDGVLKGHGTSELEGEVVATLCGLVERVNKLVYVRPLRARYKPEIGDIVVG 97

Query: 65  RVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEHF 79
           RV EVAPKRWRL+I+FSQDAVLMLSSMNLPDG QRRRTAVDELN+   F
Sbjct: 98  RVVEVAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIF 146

[Close]

BLAST of CsGy1G000280 vs. NCBI nr
Match: XP_008464390.1 (PREDICTED: exosome complex component RRP4 homolog [Cucumis melo])

HSP 1 Score: 116 bits (290), Expect = 3.53e-29
Identity = 63/110 (57.27%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 4   AVSDTLPLNYKDGVLK----------------------------------YEPEIGDIVA 63
           AV DT+P +Y+DGVLK                                  Y+PEIGDIV 
Sbjct: 37  AVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVV 96

Query: 64  GRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEHF 79
           GRVTEVAPKRWRLDIH+SQDAVLMLSSMNLPDG QRRRTAVDELN+   F
Sbjct: 97  GRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIF 146

[Close]

BLAST of CsGy1G000280 vs. NCBI nr
Match: XP_008442061.1 (PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >XP_008442062.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >XP_008442063.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >XP_008442064.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >TYK05388.1 exosome complex component RRP4-like protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (289), Expect = 4.53e-29
Identity = 62/109 (56.88%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 5   VSDTLPLNYKDGVLK----------------------------------YEPEIGDIVAG 64
           V+DT+PLNY+DGVLK                                  Y+PE+GDIV G
Sbjct: 38  VADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVG 97

Query: 65  RVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEHF 79
           RVTEVAPKRWRLDI++SQDAVLMLSSMNLPDG QRRRTAVDELN+   F
Sbjct: 98  RVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIF 146

[Close]

BLAST of CsGy1G000280 vs. ExPASy TrEMBL
Match: A0A5J5BKN7 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_021309 PE=4 SV=1)

HSP 1 Score: 112 bits (281), Expect = 8.21e-30
Identity = 61/109 (55.96%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 5   VSDTLPLNYKDGVLK----------------------------------YEPEIGDIVAG 64
           V+DT+P+NY+DGVLK                                  Y+PEIGDIV G
Sbjct: 38  VADTIPVNYEDGVLKGHGTSELEGEVVATLCGLVERVNKLVYVRPLRARYKPEIGDIVVG 97

Query: 65  RVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEHF 79
           RV EVAPKRWRL+I+FSQDAVLMLSSMNLPDG QRRRTAVDELN+   F
Sbjct: 98  RVVEVAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIF 146

[Close]

BLAST of CsGy1G000280 vs. ExPASy TrEMBL
Match: A0A1S3CLC6 (exosome complex component RRP4 homolog OS=Cucumis melo OX=3656 GN=LOC103502293 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 1.71e-29
Identity = 63/110 (57.27%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 4   AVSDTLPLNYKDGVLK----------------------------------YEPEIGDIVA 63
           AV DT+P +Y+DGVLK                                  Y+PEIGDIV 
Sbjct: 37  AVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVV 96

Query: 64  GRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEHF 79
           GRVTEVAPKRWRLDIH+SQDAVLMLSSMNLPDG QRRRTAVDELN+   F
Sbjct: 97  GRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIF 146

[Close]

BLAST of CsGy1G000280 vs. ExPASy TrEMBL
Match: A0A1S3B4T9 (exosome complex component RRP4 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486036 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 2.19e-29
Identity = 62/109 (56.88%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 5   VSDTLPLNYKDGVLK----------------------------------YEPEIGDIVAG 64
           V+DT+PLNY+DGVLK                                  Y+PE+GDIV G
Sbjct: 38  VADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVG 97

Query: 65  RVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEHF 79
           RVTEVAPKRWRLDI++SQDAVLMLSSMNLPDG QRRRTAVDELN+   F
Sbjct: 98  RVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIF 146

[Close]

BLAST of CsGy1G000280 vs. ExPASy TrEMBL
Match: A0A5D3C2G3 (Exosome complex component RRP4-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00630 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 2.19e-29
Identity = 62/109 (56.88%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 5   VSDTLPLNYKDGVLK----------------------------------YEPEIGDIVAG 64
           V+DT+PLNY+DGVLK                                  Y+PE+GDIV G
Sbjct: 38  VADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVG 97

Query: 65  RVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEHF 79
           RVTEVAPKRWRLDI++SQDAVLMLSSMNLPDG QRRRTAVDELN+   F
Sbjct: 98  RVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIF 146

[Close]

BLAST of CsGy1G000280 vs. ExPASy TrEMBL
Match: A0A5A7URG7 (Exosome complex component RRP4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00290 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 2.44e-29
Identity = 63/111 (56.76%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 4   AVSDTLPLNYKDGVLK-----------------------------------YEPEIGDIV 63
           AV DT+P +Y+DGVLK                                   Y+PEIGDIV
Sbjct: 37  AVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARLYKPEIGDIV 96

Query: 64  AGRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEHF 79
            GRVTEVAPKRWRLDIH+SQDAVLMLSSMNLPDG QRRRTAVDELN+   F
Sbjct: 97  VGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIF 147

[Close]

BLAST of CsGy1G000280 vs. TAIR 10
Match: AT1G03360.1 (ribosomal RNA processing 4 )

HSP 1 Score: 98.2 bits (243), Expect = 3.3e-21
Identity = 42/62 (67.74%), Postives = 54/62 (87.10%), Query Frame = 0


Query: 19  KYEPEIGDIVAGRVTEVAPKRWRLDIHFSQDAVLMLSSMNLPDGFQRRRTAVDELNIAEH 78
           +Y+PE+GDIV GRV EVA KRWR++++F+QD VLMLSSMN+PDG QRRRT+VDELN+   
Sbjct: 88  RYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLMLSSMNMPDGIQRRRTSVDELNMRNI 147

Query: 79  FL 81
           F+
Sbjct: 148 FV 149

The following BLAST results are available for this feature:

BLAST of CsGy1G000280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVT7	4.6e-20	67.74	Exosome complex component RRP4 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP4 P...	[more]
Q09704	4.5e-15	57.38	Exosome complex component rrp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
Q2KID0	6.0e-12	58.18	Exosome complex component RRP4 OS=Bos taurus OX=9913 GN=EXOSC2 PE=2 SV=1	[more]
Q8VBV3	6.0e-12	58.18	Exosome complex component RRP4 OS=Mus musculus OX=10090 GN=Exosc2 PE=1 SV=1	[more]
Q13868	1.3e-11	58.18	Exosome complex component RRP4 OS=Homo sapiens OX=9606 GN=EXOSC2 PE=1 SV=2	[more]

BLAST of CsGy1G000280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652375.1	1.80e-40	56.16	hypothetical protein Csa_013704 [Cucumis sativus]	[more]
XP_017187017.2	2.83e-31	70.67	exosome complex component RRP4 homolog isoform X2 [Malus domestica]	[more]
KAA8543196.1	1.70e-29	55.96	hypothetical protein F0562_021309 [Nyssa sinensis]	[more]
XP_008464390.1	3.53e-29	57.27	PREDICTED: exosome complex component RRP4 homolog [Cucumis melo]	[more]
XP_008442061.1	4.53e-29	56.88	PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo] >XP_...	[more]

BLAST of CsGy1G000280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5J5BKN7	8.21e-30	55.96	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_021309 PE=4 SV=1	[more]
A0A1S3CLC6	1.71e-29	57.27	exosome complex component RRP4 homolog OS=Cucumis melo OX=3656 GN=LOC103502293 P...	[more]
A0A1S3B4T9	2.19e-29	56.88	exosome complex component RRP4 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5D3C2G3	2.19e-29	56.88	Exosome complex component RRP4-like protein isoform X2 OS=Cucumis melo var. maku...	[more]
A0A5A7URG7	2.44e-29	56.76	Exosome complex component RRP4-like protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CsGy1G000280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03360.1	3.3e-21	67.74	ribosomal RNA processing 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 18..80 e-value: 5.8E-10 score: 41.0
None	No IPR available	PANTHER	PTHR21321:SF4	EXOSOME COMPLEX COMPONENT RRP4	coord: 19..79
IPR026699	Exosome complex RNA-binding protein 1/RRP40/RRP4	PANTHER	PTHR21321	PNAS-3 RELATED	coord: 19..79
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 19..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G000280.2	CsGy1G000280.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043628	ncRNA 3'-end processing
biological_process	GO:0071046	nuclear polyadenylation-dependent ncRNA catabolic process
biological_process	GO:0000291	nuclear-transcribed mRNA catabolic process, exonucleolytic
biological_process	GO:0031326	regulation of cellular biosynthetic process
biological_process	GO:0010556	regulation of macromolecule biosynthetic process
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0016072	rRNA metabolic process
cellular_component	GO:0000178	exosome (RNase complex)
molecular_function	GO:0003723	RNA binding