Cp4.1LG20g09100 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g09100
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	LOB domain-containing protein
Location	Cp4.1LG20: 6701146 .. 6702821 (+)
RNA-Seq Expression	Cp4.1LG20g09100
Synteny	Cp4.1LG20g09100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATATCTCTGTCTTCTTTCTCTCTCTACTGAGTCTAAAATGGACGCAAAATCCAGCCCAACTTCAACCATCTTCCGTTCTCAGTCGCCGTCGTCGTCCCCATTACCGCCGCCTCCGAGTGTTCAGGCCGGCTTGGTGGTCAGTCCGTGTGCTGCGTGCAAGACTCTGAGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTCTCAAGTTTACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGTACCTCATCAGCCCCTAATTTCCTACTTTTTCTCGAGTTTTCGTGTTATCACTCTGTTCTTAGTTGTTGAAATTGTGAATTTCGATGTGGAAATTGAAATTTGTTCTTGGAATCGTTACGAAATCGTTGAATTACCGAACGATTTTAGGGAAGGAAAAAAATACTGTTGACAGGAATAGTTTGGTCAATGCGTATGCGTTCCGAGCAAAAGAACAAAATGGAATTAGTAGTGAAATTGATCTTTCCTTTCCTTTCTATATAATCGAGCGAATCGTAATCGAGTAGAACTGTGTGTTTTTGGAGGCGGCTTAGTGCCGTAGGTGACTTGGTGTACAGGCAATGAACATAGTTAGGGCTCACATATACAACGATGTCCCTATTTTGCCCGTAAATCTGAAAAATTACGCAATCCAAATCTGTAACGATGTTCATATTTTGCTTGTAAATCTGAAAAATTACGCAATCCAAATCTATTTGTTTGTTTGTGTTGGCTCAATGGCCATGTGGAGCAATTATAATCAAACAATCAAACAAAGCAGCTCTTCTGTTTGATTTTTGTCCTCAAAGAACAGCCAATCATATAACAATCTGTTCTTCCACAATTCAAATCACCACAAACCAAACACTTCCTGATATCAATCACCTTATTGAATTCTTCAGGATCTTCCTGAATCACAGAGAATTGATGCAGTGAGTAGCTTGGTATACGAAGCAAGCGCAAGAATCAGAGATCCAGTATATGGATGTGCAGGGGCCATTTCCCAGCTCCAAAAACAAATAAACGAACTGCAAGCAGAGCTAGCCAAAACACAGGCTGAGCTTGTCAACATCCACAGCCACCAAACAAATTTGGTGGCTCTAATTTGCAAGGAACTAGCTCAAACACCACCACCGGTGTCGCCCCCGGACCACCTCGCACTCGACAACAATCTCAACACTGCCACTCCTCAGAGCTACACAAATTTGTTTGAAGATAGCAGTATTTGGGAGCCTCTTTGGACATGATTAGACCTGAAAAGGTTGTGGGAAGTCAAAGATGGAGTAGAATATATGAAAGTTGAGTAGTTGAATATTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTCATAACCAAGAAAAGTGGAGTGAAGAAGAAAAAGGATGATGTTTACTACACTAGATTAGTGCAAAAGTATTAAGTCTTAGTGTGTGTGTATATATATATCCTTAGATATCTTTGTCAAAGTTCCTTTACTTCAAGTGGTGTCAATTGTGTTGCTTCCCTCCTTTGAAAATGACCACAAATGTCCTCTTGCTATGATCTCGGGCTCAACAACTCGTGGGTTGTGTGAATTTACACATCTAACATTTTGATCGATGATATAGTATTTGA

mRNA sequence

CATATCTCTGTCTTCTTTCTCTCTCTACTGAGTCTAAAATGGACGCAAAATCCAGCCCAACTTCAACCATCTTCCGTTCTCAGTCGCCGTCGTCGTCCCCATTACCGCCGCCTCCGAGTGTTCAGGCCGGCTTGGTGGTCAGTCCGTGTGCTGCGTGCAAGACTCTGAGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTCTCAAGTTTACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGAATTGATGCAGTGAGTAGCTTGGTATACGAAGCAAGCGCAAGAATCAGAGATCCAGTATATGGATGTGCAGGGGCCATTTCCCAGCTCCAAAAACAAATAAACGAACTGCAAGCAGAGCTAGCCAAAACACAGGCTGAGCTTGTCAACATCCACAGCCACCAAACAAATTTGGTGGCTCTAATTTGCAAGGAACTAGCTCAAACACCACCACCGGTGTCGCCCCCGGACCACCTCGCACTCGACAACAATCTCAACACTGCCACTCCTCAGAGCTACACAAATTTGTTTGAAGATAGCAGTATTTGGGAGCCTCTTTGGACATGATTAGACCTGAAAAGGTTGTGGGAAGTCAAAGATGGAGTAGAATATATGAAAGTTGAGTAGTTGAATATTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTCATAACCAAGAAAAGTGGAGTGAAGAAGAAAAAGGATGATGTTTACTACACTAGATTAGTGCAAAAGTATTAAGTCTTAGTGTGTGTGTATATATATATCCTTAGATATCTTTGTCAAAGTTCCTTTACTTCAAGTGGTGTCAATTGTGTTGCTTCCCTCCTTTGAAAATGACCACAAATGTCCTCTTGCTATGATCTCGGGCTCAACAACTCGTGGGTTGTGTGAATTTACACATCTAACATTTTGATCGATGATATAGTATTTGA

Coding sequence (CDS)

ATGGACGCAAAATCCAGCCCAACTTCAACCATCTTCCGTTCTCAGTCGCCGTCGTCGTCCCCATTACCGCCGCCTCCGAGTGTTCAGGCCGGCTTGGTGGTCAGTCCGTGTGCTGCGTGCAAGACTCTGAGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTCTCAAGTTTACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGAATTGATGCAGTGAGTAGCTTGGTATACGAAGCAAGCGCAAGAATCAGAGATCCAGTATATGGATGTGCAGGGGCCATTTCCCAGCTCCAAAAACAAATAAACGAACTGCAAGCAGAGCTAGCCAAAACACAGGCTGAGCTTGTCAACATCCACAGCCACCAAACAAATTTGGTGGCTCTAATTTGCAAGGAACTAGCTCAAACACCACCACCGGTGTCGCCCCCGGACCACCTCGCACTCGACAACAATCTCAACACTGCCACTCCTCAGAGCTACACAAATTTGTTTGAAGATAGCAGTATTTGGGAGCCTCTTTGGACATGA

Protein sequence

MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQSYTNLFEDSSIWEPLWT

Homology

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-50
Identity = 111/197 (56.35%), Postives = 139/197 (70.56%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           M++KS  +       S SSS   PPPS+   +V+SPCAACK LRRRC E+CVLAPYFPP+
Sbjct: 1   MESKSDASVATTPIISSSSS---PPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPT 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DP KFTIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEA ARIRDPVYGCAGAI  LQ+
Sbjct: 61  DPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQR 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALD-NNLNTATPQ 180
           Q++ELQA+LAK Q E+VN+   ++NL+ LI     Q        D+++ + N+L     +
Sbjct: 121 QVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQK---QEQDNMSFESNDLGFLEDK 180

Query: 181 SYTNLFEDSSIWEPLWT 197
           S TN       W+PLWT
Sbjct: 181 SNTN--SSMLWWDPLWT 189

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50
Identity = 116/216 (53.70%), Postives = 149/216 (68.98%), Query Frame = 0


Query: 3   AKSSPTSTIFRSQSPSSSPLPPPPS----VQAGLVVSPCAACKTLRRRCTEKCVLAPYFP 62
           AK + T+T   S SP+SSP PPPPS     Q  +V+SPCAACK LRRRC +KCVLAPYFP
Sbjct: 19  AKVTETTTPVNSPSPTSSP-PPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFP 78

Query: 63  PSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQL 122
           P+DP KFTIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEA AR+RDPVYGCAGAI  L
Sbjct: 79  PTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHL 138

Query: 123 QKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSP--PDHLALDNNLNT- 182
           Q+Q++ELQA+LAKTQ ELV +   +++L+ LI   + QT   V       ++ +++  + 
Sbjct: 139 QRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQKMSFESSFESG 198

Query: 183 ----ATPQSYTN---LFEDS--------SIWEPLWT 197
               ++P   +N     ED+        S W+PLWT
Sbjct: 199 DEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 3.7e-36
Identity = 82/162 (50.62%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 35  SPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVS 94
           SPCA+CK LRRRC + C+ APYFPP DP KF I H++FGASN+ K+LQ+LP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 95  SLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELV--------NIHSHQTNL 154
           SLV+EA+AR+RDPVYGC GAIS LQ Q+++LQ +LA  QAE++         + SH   L
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVL 126

Query: 155 VALICKELAQTPPPVSPPDHLAL---DNNLNTATPQSYTNLF 186
                 EL Q        DH AL   +NN+N     +  N F
Sbjct: 127 ------ELDQ--------DHKALLLNNNNINNCNTNNNNNNF 154

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.4e-36
Identity = 82/169 (48.52%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 35  SPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVS 94
           SPCAACK LRRRC + CV +PYFP  +P KF   HR+FGASN+ K+LQ+LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 95  SLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHSHQ-TNLVAL-ICK 154
           S+VYEA+AR+RDPVYGC GAIS LQ+QI+ LQA+LA  QAE+V++   Q TN     +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 155 EL-----AQTPPPVSPPDHLALDNNLNTATPQSYTNLFEDSSIWEPLWT 197
           +      + +   VSP D+  +          S+ ++ +++S+ E +W+
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGM---------FSHMDIVDEASLGESMWS 171

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.0e-33
Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 31  GLVVSPCAACKTLRRRCT-EKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQR 90
           G  VSPCA CK LRR+C  + CV APYFP  +P KF I H+IFGASN+ K+LQ+L E+ R
Sbjct: 9   GRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHR 68

Query: 91  IDAVSSLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHS 142
            DAV S+VYEA+ARI+DPVYGC G IS L +Q+  LQ +LA  QAEL++I +
Sbjct: 69  SDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRT 120

[Close]

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: XP_022970428.1 (LOB domain-containing protein 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 384 bits (985), Expect = 3.43e-134
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS
Sbjct: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK
Sbjct: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQS 180
           QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDH ALDNNLNTA PQS
Sbjct: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHHALDNNLNTAIPQS 180

Query: 181 YTNLFEDSSIWEPLWT 196
           YTNLFEDSSIWEPLWT
Sbjct: 181 YTNLFEDSSIWEPLWT 196

[Close]

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: XP_022964984.1 (LOB domain-containing protein 1-like isoform X1 [Cucurbita moschata] >KAG6583502.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 375 bits (962), Expect = 1.10e-130
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           MDAKSSPTSTIFRSQSPSSSPLPPP SVQAGLV SPCAACKTLRRRCTEKCVLAPYFPPS
Sbjct: 1   MDAKSSPTSTIFRSQSPSSSPLPPPQSVQAGLVASPCAACKTLRRRCTEKCVLAPYFPPS 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK
Sbjct: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQS 180
           QINELQAELAKTQAEL+NIHSHQTNLVALICKELAQTPPPVSP DH  LDNNLNTATPQS
Sbjct: 121 QINELQAELAKTQAELLNIHSHQTNLVALICKELAQTPPPVSPLDHHTLDNNLNTATPQS 180

Query: 181 YTNLFEDSSIWEPLWT 196
           YTNLFEDSSIWEPLWT
Sbjct: 181 YTNLFEDSSIWEPLWT 196

[Close]

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: KAG7019257.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375 bits (962), Expect = 2.25e-130
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           MDAKSSPTSTIFRSQSPSSSPLPPP SVQAGLV SPCAACKTLRRRCTEKCVLAPYFPPS
Sbjct: 21  MDAKSSPTSTIFRSQSPSSSPLPPPQSVQAGLVASPCAACKTLRRRCTEKCVLAPYFPPS 80

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK
Sbjct: 81  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 140

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQS 180
           QINELQAELAKTQAEL+NIHSHQTNLVALICKELAQTPPPVSP DH  LDNNLNTATPQS
Sbjct: 141 QINELQAELAKTQAELLNIHSHQTNLVALICKELAQTPPPVSPLDHHTLDNNLNTATPQS 200

Query: 181 YTNLFEDSSIWEPLWT 196
           YTNLFEDSSIWEPLWT
Sbjct: 201 YTNLFEDSSIWEPLWT 216

[Close]

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: XP_022970429.1 (LOB domain-containing protein 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 365 bits (936), Expect = 8.21e-127
Identity = 188/196 (95.92%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS
Sbjct: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DPLKFTIAHRIFGASNIIKLLQ      RIDAVSSLVYEASARIRDPVYGCAGAISQLQK
Sbjct: 61  DPLKFTIAHRIFGASNIIKLLQ------RIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQS 180
           QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDH ALDNNLNTA PQS
Sbjct: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHHALDNNLNTAIPQS 180

Query: 181 YTNLFEDSSIWEPLWT 196
           YTNLFEDSSIWEPLWT
Sbjct: 181 YTNLFEDSSIWEPLWT 190

[Close]

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: XP_022964985.1 (LOB domain-containing protein 11-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 356 bits (913), Expect = 2.63e-123
Identity = 184/196 (93.88%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           MDAKSSPTSTIFRSQSPSSSPLPPP SVQAGLV SPCAACKTLRRRCTEKCVLAPYFPPS
Sbjct: 1   MDAKSSPTSTIFRSQSPSSSPLPPPQSVQAGLVASPCAACKTLRRRCTEKCVLAPYFPPS 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DPLKFTIAHRIFGASNIIKLLQ      RIDAVSSLVYEASARIRDPVYGCAGAISQLQK
Sbjct: 61  DPLKFTIAHRIFGASNIIKLLQ------RIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQS 180
           QINELQAELAKTQAEL+NIHSHQTNLVALICKELAQTPPPVSP DH  LDNNLNTATPQS
Sbjct: 121 QINELQAELAKTQAELLNIHSHQTNLVALICKELAQTPPPVSPLDHHTLDNNLNTATPQS 180

Query: 181 YTNLFEDSSIWEPLWT 196
           YTNLFEDSSIWEPLWT
Sbjct: 181 YTNLFEDSSIWEPLWT 190

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy TrEMBL
Match: A0A6J1I3T6 (LOB domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469412 PE=3 SV=1)

HSP 1 Score: 384 bits (985), Expect = 1.66e-134
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS
Sbjct: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK
Sbjct: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQS 180
           QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDH ALDNNLNTA PQS
Sbjct: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHHALDNNLNTAIPQS 180

Query: 181 YTNLFEDSSIWEPLWT 196
           YTNLFEDSSIWEPLWT
Sbjct: 181 YTNLFEDSSIWEPLWT 196

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy TrEMBL
Match: A0A6J1HPR9 (LOB domain-containing protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464931 PE=3 SV=1)

HSP 1 Score: 375 bits (962), Expect = 5.34e-131
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           MDAKSSPTSTIFRSQSPSSSPLPPP SVQAGLV SPCAACKTLRRRCTEKCVLAPYFPPS
Sbjct: 1   MDAKSSPTSTIFRSQSPSSSPLPPPQSVQAGLVASPCAACKTLRRRCTEKCVLAPYFPPS 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK
Sbjct: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQS 180
           QINELQAELAKTQAEL+NIHSHQTNLVALICKELAQTPPPVSP DH  LDNNLNTATPQS
Sbjct: 121 QINELQAELAKTQAELLNIHSHQTNLVALICKELAQTPPPVSPLDHHTLDNNLNTATPQS 180

Query: 181 YTNLFEDSSIWEPLWT 196
           YTNLFEDSSIWEPLWT
Sbjct: 181 YTNLFEDSSIWEPLWT 196

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy TrEMBL
Match: A0A6J1I5G7 (LOB domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469412 PE=3 SV=1)

HSP 1 Score: 365 bits (936), Expect = 3.97e-127
Identity = 188/196 (95.92%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS
Sbjct: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DPLKFTIAHRIFGASNIIKLLQ      RIDAVSSLVYEASARIRDPVYGCAGAISQLQK
Sbjct: 61  DPLKFTIAHRIFGASNIIKLLQ------RIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQS 180
           QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDH ALDNNLNTA PQS
Sbjct: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHHALDNNLNTAIPQS 180

Query: 181 YTNLFEDSSIWEPLWT 196
           YTNLFEDSSIWEPLWT
Sbjct: 181 YTNLFEDSSIWEPLWT 190

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy TrEMBL
Match: A0A6J1HMF0 (LOB domain-containing protein 11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464931 PE=3 SV=1)

HSP 1 Score: 356 bits (913), Expect = 1.28e-123
Identity = 184/196 (93.88%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           MDAKSSPTSTIFRSQSPSSSPLPPP SVQAGLV SPCAACKTLRRRCTEKCVLAPYFPPS
Sbjct: 1   MDAKSSPTSTIFRSQSPSSSPLPPPQSVQAGLVASPCAACKTLRRRCTEKCVLAPYFPPS 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DPLKFTIAHRIFGASNIIKLLQ      RIDAVSSLVYEASARIRDPVYGCAGAISQLQK
Sbjct: 61  DPLKFTIAHRIFGASNIIKLLQ------RIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQS 180
           QINELQAELAKTQAEL+NIHSHQTNLVALICKELAQTPPPVSP DH  LDNNLNTATPQS
Sbjct: 121 QINELQAELAKTQAELLNIHSHQTNLVALICKELAQTPPPVSPLDHHTLDNNLNTATPQS 180

Query: 181 YTNLFEDSSIWEPLWT 196
           YTNLFEDSSIWEPLWT
Sbjct: 181 YTNLFEDSSIWEPLWT 190

[Close]

BLAST of Cp4.1LG20g09100 vs. ExPASy TrEMBL
Match: A0A6J1DVT7 (LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111024535 PE=3 SV=1)

HSP 1 Score: 328 bits (840), Expect = 2.51e-112
Identity = 167/198 (84.34%), Postives = 176/198 (88.89%), Query Frame = 0


Query: 2   DAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSD 61
           +AKS+ TSTI RSQSPS SP PPPPS+ AG+VVSPCAACK LRRRC EKCVLAPYFPPSD
Sbjct: 5   EAKSNTTSTILRSQSPSPSP-PPPPSIPAGVVVSPCAACKILRRRCAEKCVLAPYFPPSD 64

Query: 62  PLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQ 121
           P KFTIAHR+FGASNIIKLLQDLPESQR DAVSSLVYEASARIRDPVYGCAGAI QLQKQ
Sbjct: 65  PFKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQ 124

Query: 122 INELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQSY 181
           INELQAELAKTQAELVN+H HQ +LVALICKELAQTPPPV PPDH +LDNN N ATPQSY
Sbjct: 125 INELQAELAKTQAELVNMHCHQASLVALICKELAQTPPPVPPPDHRSLDNNFNIATPQSY 184

Query: 182 TN---LFEDSSIWEPLWT 196
            N     EDS+IWEPLWT
Sbjct: 185 QNYTPFLEDSNIWEPLWT 201

[Close]

BLAST of Cp4.1LG20g09100 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 111/197 (56.35%), Postives = 139/197 (70.56%), Query Frame = 0


Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           M++KS  +       S SSS   PPPS+   +V+SPCAACK LRRRC E+CVLAPYFPP+
Sbjct: 1   MESKSDASVATTPIISSSSS---PPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPT 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DP KFTIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEA ARIRDPVYGCAGAI  LQ+
Sbjct: 61  DPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQR 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALD-NNLNTATPQ 180
           Q++ELQA+LAK Q E+VN+   ++NL+ LI     Q        D+++ + N+L     +
Sbjct: 121 QVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQK---QEQDNMSFESNDLGFLEDK 180

Query: 181 SYTNLFEDSSIWEPLWT 197
           S TN       W+PLWT
Sbjct: 181 SNTN--SSMLWWDPLWT 189

[Close]

BLAST of Cp4.1LG20g09100 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 199.1 bits (505), Expect = 3.2e-51
Identity = 116/216 (53.70%), Postives = 149/216 (68.98%), Query Frame = 0


Query: 3   AKSSPTSTIFRSQSPSSSPLPPPPS----VQAGLVVSPCAACKTLRRRCTEKCVLAPYFP 62
           AK + T+T   S SP+SSP PPPPS     Q  +V+SPCAACK LRRRC +KCVLAPYFP
Sbjct: 19  AKVTETTTPVNSPSPTSSP-PPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFP 78

Query: 63  PSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQL 122
           P+DP KFTIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEA AR+RDPVYGCAGAI  L
Sbjct: 79  PTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHL 138

Query: 123 QKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSP--PDHLALDNNLNT- 182
           Q+Q++ELQA+LAKTQ ELV +   +++L+ LI   + QT   V       ++ +++  + 
Sbjct: 139 QRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQKMSFESSFESG 198

Query: 183 ----ATPQSYTN---LFEDS--------SIWEPLWT 197
               ++P   +N     ED+        S W+PLWT
Sbjct: 199 DEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of Cp4.1LG20g09100 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 152.9 bits (385), Expect = 2.6e-37
Identity = 82/162 (50.62%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 35  SPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVS 94
           SPCA+CK LRRRC + C+ APYFPP DP KF I H++FGASN+ K+LQ+LP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 95  SLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELV--------NIHSHQTNL 154
           SLV+EA+AR+RDPVYGC GAIS LQ Q+++LQ +LA  QAE++         + SH   L
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVL 126

Query: 155 VALICKELAQTPPPVSPPDHLAL---DNNLNTATPQSYTNLF 186
                 EL Q        DH AL   +NN+N     +  N F
Sbjct: 127 ------ELDQ--------DHKALLLNNNNINNCNTNNNNNNF 154

[Close]

BLAST of Cp4.1LG20g09100 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 152.1 bits (383), Expect = 4.5e-37
Identity = 82/169 (48.52%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 35  SPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVS 94
           SPCAACK LRRRC + CV +PYFP  +P KF   HR+FGASN+ K+LQ+LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 95  SLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHSHQ-TNLVAL-ICK 154
           S+VYEA+AR+RDPVYGC GAIS LQ+QI+ LQA+LA  QAE+V++   Q TN     +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 155 EL-----AQTPPPVSPPDHLALDNNLNTATPQSYTNLFEDSSIWEPLWT 197
           +      + +   VSP D+  +          S+ ++ +++S+ E +W+
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGM---------FSHMDIVDEASLGESMWS 171

[Close]

BLAST of Cp4.1LG20g09100 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-34
Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 31  GLVVSPCAACKTLRRRCT-EKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQR 90
           G  VSPCA CK LRR+C  + CV APYFP  +P KF I H+IFGASN+ K+LQ+L E+ R
Sbjct: 9   GRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHR 68

Query: 91  IDAVSSLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHS 142
            DAV S+VYEA+ARI+DPVYGC G IS L +Q+  LQ +LA  QAEL++I +
Sbjct: 69  SDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRT 120

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g09100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	1.6e-50	56.35	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	4.5e-50	53.70	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q8LBW3	3.7e-36	50.62	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	6.4e-36	48.52	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9SA51	5.0e-33	59.82	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]

BLAST of Cp4.1LG20g09100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970428.1	3.43e-134	98.98	LOB domain-containing protein 1-like isoform X1 [Cucurbita maxima]	[more]
XP_022964984.1	1.10e-130	96.94	LOB domain-containing protein 1-like isoform X1 [Cucurbita moschata] >KAG6583502...	[more]
KAG7019257.1	2.25e-130	96.94	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022970429.1	8.21e-127	95.92	LOB domain-containing protein 1-like isoform X2 [Cucurbita maxima]	[more]
XP_022964985.1	2.63e-123	93.88	LOB domain-containing protein 11-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG20g09100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3T6	1.66e-134	98.98	LOB domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HPR9	5.34e-131	96.94	LOB domain-containing protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I5G7	3.97e-127	95.92	LOB domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HMF0	1.28e-123	93.88	LOB domain-containing protein 11-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1DVT7	2.51e-112	84.34	LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]

BLAST of Cp4.1LG20g09100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	1.1e-51	56.35	LOB domain-containing protein 1	[more]
AT2G28500.1	3.2e-51	53.70	LOB domain-containing protein 11	[more]
AT2G30130.1	2.6e-37	50.62	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	4.5e-37	48.52	LOB domain-containing protein 4	[more]
AT1G16530.1	3.6e-34	59.82	ASYMMETRIC LEAVES 2-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 17..195
None	No IPR available	PANTHER	PTHR31301:SF137	LOB DOMAIN-CONTAINING PROTEIN 1	coord: 17..195
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 36..133 e-value: 1.3E-40 score: 138.0
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 35..136 score: 26.88916

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g09100.1	Cp4.1LG20g09100.1	mRNA