Cp4.1LG20g08740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g08740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger protein CONSTANS-LIKE 5-like
Location	Cp4.1LG20: 7179781 .. 7181258 (+)
RNA-Seq Expression	Cp4.1LG20g08740
Synteny	Cp4.1LG20g08740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGCCTTCTCCTCCGCCACCCTCGAAGCCTCTCTCTGCCACCTCCCCGCCCCCGACCTCGCCATGTCGCCACCACTTCTTGCATCCTTCCCTCATTTCATATCTTCCCACTCCTCCTCCTTCTCCTCGCTCCTCGCAAGCGACCTGGCCCCGATGCTAGAGCCATCAGGGCTCTTACCCTCGGAGCTCAGTTATAGTTGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCGACATCAAAGCCTCAACGAAGTATGAGCCACGGACCAGGCATTCAGATTTCAACGTTGTTCGACTTAGAAAGTTCTGTGAGAAGGGCTTACAGCTCCAGTGATTTGCAGGTGTGCTATATGTCTCATATTTATTCGAACCAATCCAACCCAAAAGATTTATAGTCAAGTTGAATTAGGTTCATTGTTTAATAAAAAAATTTATTACTCGAGCCAGTCCAATCTAAAACATATTTTAATTCAACTCAACCTAACCTACGAGATGACAGGGAAGAACAGAAATGGCAAGCTCGAGTGAAAGCAGCTTGATAATAGAAGGAATGAGTACCAAAGCTTGTCGGTATAGTCCGGAAGAGAAAAGACAAAGAATCGAGAAGTATAAAACCAAGAGAAATCAGAGGAATTTTAATAAGAAAATTAAGGTATTTATCTTTTATTATTTATTCCACTTATTTTTTTAATTAATTATAAAAAATATATATTTAATTTCTACAAGAAGAACAAAAATTCATGTAAAATAATTGTATAATATTGGTGGAATTAAAAATGATTGTGGATAGGATTACTATTCATATGTAGCTACCACCAGTGTTCTTTATTTTTTTTATTTTTTATTTTTAATAAAGTTGTTTAAAAAACTAAAATACTTTACAATTTTTTTTTATTTAATTATAATTTCAATCTCTCGGGAACATGTCTGTGTTGTTAATGAACTTTAAAATAATATAATCTGTATCTTATATGTGAGATCTCACATCGGTCCGAGAGGACCTTATAAGGGTGTGAAACCCTCTCCCTAATAAACGTGTTTTAAAATCGTGAGTTGACGGCGATATGTAATGGGATAAAACAGACAATATCTACTGGCCGTGGACTTAAAACTGTTATATTATAAGTCTGTAAATTTTTTAAAATTTGTGTCAAACTTGTTTTATTTGAATATGTTTGAACTTTTTTTTTTCTTATATTATATTACATTATCTCTGGTTAGTTCAATTATGACGTGTTAATTTATCGAATGCTCGGGAATATGGTAGTATGAATGCAGGAAGACATTGGCGGATAGTAGAAGGCGAATAAGAGGGAGGTTTGCGAGAAATGAAGAAGCTGAGAATAGTAACTCGACCAGCTCGCCAACAGAGACATGGAGCTGCTACGACAATGCCATGACGGAGGAAGTCGGCCAAGACGATGGCTCATGGATCACCTTTCTTGATTCCTACTCTGTTAATTTTATTCCTTGA

mRNA sequence

ATGCACGCCTTCTCCTCCGCCACCCTCGAAGCCTCTCTCTGCCACCTCCCCGCCCCCGACCTCGCCATGTCGCCACCACTTCTTGCATCCTTCCCTCATTTCATATCTTCCCACTCCTCCTCCTTCTCCTCGCTCCTCGCAAGCGACCTGGCCCCGATGCTAGAGCCATCAGGGCTCTTACCCTCGGAGCTCAGTTATAGTTGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCGACATCAAAGCCTCAACGAAGTATGAGCCACGGACCAGGCATTCAGATTTCAACGTTGTTCGACTTAGAAAGTTCTTATGAATGCAGGAAGACATTGGCGGATAGTAGAAGGCGAATAAGAGGGAGGTTTGCGAGAAATGAAGAAGCTGAGAATAGTAACTCGACCAGCTCGCCAACAGAGACATGGAGCTGCTACGACAATGCCATGACGGAGGAAGTCGGCCAAGACGATGGCTCATGGATCACCTTTCTTGATTCCTACTCTGTTAATTTTATTCCTTGA

Coding sequence (CDS)

ATGCACGCCTTCTCCTCCGCCACCCTCGAAGCCTCTCTCTGCCACCTCCCCGCCCCCGACCTCGCCATGTCGCCACCACTTCTTGCATCCTTCCCTCATTTCATATCTTCCCACTCCTCCTCCTTCTCCTCGCTCCTCGCAAGCGACCTGGCCCCGATGCTAGAGCCATCAGGGCTCTTACCCTCGGAGCTCAGTTATAGTTGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCGACATCAAAGCCTCAACGAAGTATGAGCCACGGACCAGGCATTCAGATTTCAACGTTGTTCGACTTAGAAAGTTCTTATGAATGCAGGAAGACATTGGCGGATAGTAGAAGGCGAATAAGAGGGAGGTTTGCGAGAAATGAAGAAGCTGAGAATAGTAACTCGACCAGCTCGCCAACAGAGACATGGAGCTGCTACGACAATGCCATGACGGAGGAAGTCGGCCAAGACGATGGCTCATGGATCACCTTTCTTGATTCCTACTCTGTTAATTTTATTCCTTGA

Protein sequence

MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLAPMLEPSGLLPSELSYSCSSGPCSSYGSPTSKPQRSMSHGPGIQISTLFDLESSYECRKTLADSRRRIRGRFARNEEAENSNSTSSPTETWSCYDNAMTEEVGQDDGSWITFLDSYSVNFIP

Homology

[Close]

BLAST of Cp4.1LG20g08740 vs. NCBI nr
Match: KAG6583456.1 (hypothetical protein SDJN03_19388, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310 bits (795), Expect = 7.58e-106
Identity = 162/183 (88.52%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLAPMLEPSGLL 60
           MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDL PMLE  GLL
Sbjct: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLVPMLESPGLL 60

Query: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMSHGPGIQISTLFDLESS-----------YECRK 120
           PSELSYSCSSGPCSSYGSPTSKPQRSM H P +QISTLFDLESS           YECRK
Sbjct: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMRHRPNVQISTLFDLESSVRRAYSFNDLQYECRK 120

Query: 121 TLADSRRRIRGRFARNEEAENSNSTSSPTETWSCYDNAMTEEVGQDDGSWITFLDSYSVN 172
           TLADSRRRIRGRFARNEE ENSNSTSSPTETWSCYDNA  EEVGQDDGSWITFLDSYSVN
Sbjct: 121 TLADSRRRIRGRFARNEEVENSNSTSSPTETWSCYDNATAEEVGQDDGSWITFLDSYSVN 180

[Close]

BLAST of Cp4.1LG20g08740 vs. NCBI nr
Match: XP_022970464.1 (uncharacterized protein LOC111469436 isoform X2 [Cucurbita maxima])

HSP 1 Score: 301 bits (772), Expect = 2.12e-102
Identity = 159/183 (86.89%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLAPMLEPSGLL 60
           MHAFSSATLEASLCHLP PDLA+SPPLLASFPHFISSHSS    LLAS+LAPMLEPSGLL
Sbjct: 1   MHAFSSATLEASLCHLPTPDLAVSPPLLASFPHFISSHSS----LLASELAPMLEPSGLL 60

Query: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMSHGPGIQISTLFDLESS-----------YECRK 120
           PSELSYSCSSGPCSSY SPTSKPQRSMSHGPG+QIS LFDLESS           YECRK
Sbjct: 61  PSELSYSCSSGPCSSYESPTSKPQRSMSHGPGVQISMLFDLESSVRRAYRSNDLQYECRK 120

Query: 121 TLADSRRRIRGRFARNEEAENSNSTSSPTETWSCYDNAMTEEVGQDDGSWITFLDSYSVN 172
           TLADSRRRIRGRFARNEE ENSNSTSSPTETWSCYDNA TEE GQDDGSWITFLDSYSVN
Sbjct: 121 TLADSRRRIRGRFARNEEVENSNSTSSPTETWSCYDNATTEEDGQDDGSWITFLDSYSVN 179

[Close]

BLAST of Cp4.1LG20g08740 vs. NCBI nr
Match: KAG7019213.1 (Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291 bits (744), Expect = 2.58e-97
Identity = 162/234 (69.23%), Postives = 163/234 (69.66%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLAPMLEPSGLL 60
           MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDL PMLE  GLL
Sbjct: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLVPMLESPGLL 60

Query: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMSHGPGIQISTLFDLESS---------------- 120
           PSELSYSCSSGPCSSYGSPTSKPQRSM H P +QISTLFDLESS                
Sbjct: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMRHRPNVQISTLFDLESSVRRAYSFNDLQGRTEM 120

Query: 121 ----------------------------------------------YECRKTLADSRRRI 172
                                                         YECRKTLADSRRRI
Sbjct: 121 ASSSESSLIIEGMSTKACRYSPEEKRQRIEKYKTKRNQRNFNKKIKYECRKTLADSRRRI 180

[Close]

BLAST of Cp4.1LG20g08740 vs. NCBI nr
Match: XP_022970463.1 (zinc finger protein CONSTANS-LIKE 5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 282 bits (721), Expect = 7.14e-94
Identity = 159/234 (67.95%), Postives = 162/234 (69.23%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLAPMLEPSGLL 60
           MHAFSSATLEASLCHLP PDLA+SPPLLASFPHFISSHSS    LLAS+LAPMLEPSGLL
Sbjct: 1   MHAFSSATLEASLCHLPTPDLAVSPPLLASFPHFISSHSS----LLASELAPMLEPSGLL 60

Query: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMSHGPGIQISTLFDLESS---------------- 120
           PSELSYSCSSGPCSSY SPTSKPQRSMSHGPG+QIS LFDLESS                
Sbjct: 61  PSELSYSCSSGPCSSYESPTSKPQRSMSHGPGVQISMLFDLESSVRRAYRSNDLQGRTEM 120

Query: 121 ----------------------------------------------YECRKTLADSRRRI 172
                                                         YECRKTLADSRRRI
Sbjct: 121 TNSNESSLIIEGMSTKACRYSPEEKRQRIEKYKTKRNQRNFNKKIKYECRKTLADSRRRI 180

[Close]

BLAST of Cp4.1LG20g08740 vs. NCBI nr
Match: XP_022964840.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata])

HSP 1 Score: 281 bits (720), Expect = 2.27e-93
Identity = 158/230 (68.70%), Postives = 159/230 (69.13%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLAPMLEPSGLL 60
           MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDL PMLE  GLL
Sbjct: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLVPMLESPGLL 60

Query: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMSHGPGIQISTLFDLESS---------------- 120
           PSELSYSCSSGPCSSYGSPTSKPQRSM H P +QISTLFDLESS                
Sbjct: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMRHRPNVQISTLFDLESSVRRAYSFNDLQGRTEM 120

Query: 121 ----------------------------------------------YECRKTLADSRRRI 168
                                                         YECRKTLADSRRRI
Sbjct: 121 ASSSESSLIIEGMSTKACRYSPEEKRQRIEKYKTKRNQRNFNKKIKYECRKTLADSRRRI 180

[Close]

BLAST of Cp4.1LG20g08740 vs. ExPASy TrEMBL
Match: A0A6J1I5K4 (uncharacterized protein LOC111469436 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469436 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 1.02e-102
Identity = 159/183 (86.89%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLAPMLEPSGLL 60
           MHAFSSATLEASLCHLP PDLA+SPPLLASFPHFISSHSS    LLAS+LAPMLEPSGLL
Sbjct: 1   MHAFSSATLEASLCHLPTPDLAVSPPLLASFPHFISSHSS----LLASELAPMLEPSGLL 60

Query: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMSHGPGIQISTLFDLESS-----------YECRK 120
           PSELSYSCSSGPCSSY SPTSKPQRSMSHGPG+QIS LFDLESS           YECRK
Sbjct: 61  PSELSYSCSSGPCSSYESPTSKPQRSMSHGPGVQISMLFDLESSVRRAYRSNDLQYECRK 120

Query: 121 TLADSRRRIRGRFARNEEAENSNSTSSPTETWSCYDNAMTEEVGQDDGSWITFLDSYSVN 172
           TLADSRRRIRGRFARNEE ENSNSTSSPTETWSCYDNA TEE GQDDGSWITFLDSYSVN
Sbjct: 121 TLADSRRRIRGRFARNEEVENSNSTSSPTETWSCYDNATTEEDGQDDGSWITFLDSYSVN 179

[Close]

BLAST of Cp4.1LG20g08740 vs. ExPASy TrEMBL
Match: A0A6J1I3X3 (zinc finger protein CONSTANS-LIKE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469436 PE=4 SV=1)

HSP 1 Score: 282 bits (721), Expect = 3.46e-94
Identity = 159/234 (67.95%), Postives = 162/234 (69.23%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLAPMLEPSGLL 60
           MHAFSSATLEASLCHLP PDLA+SPPLLASFPHFISSHSS    LLAS+LAPMLEPSGLL
Sbjct: 1   MHAFSSATLEASLCHLPTPDLAVSPPLLASFPHFISSHSS----LLASELAPMLEPSGLL 60

Query: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMSHGPGIQISTLFDLESS---------------- 120
           PSELSYSCSSGPCSSY SPTSKPQRSMSHGPG+QIS LFDLESS                
Sbjct: 61  PSELSYSCSSGPCSSYESPTSKPQRSMSHGPGVQISMLFDLESSVRRAYRSNDLQGRTEM 120

Query: 121 ----------------------------------------------YECRKTLADSRRRI 172
                                                         YECRKTLADSRRRI
Sbjct: 121 TNSNESSLIIEGMSTKACRYSPEEKRQRIEKYKTKRNQRNFNKKIKYECRKTLADSRRRI 180

[Close]

BLAST of Cp4.1LG20g08740 vs. ExPASy TrEMBL
Match: A0A6J1HLZ0 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464822 PE=4 SV=1)

HSP 1 Score: 281 bits (720), Expect = 1.10e-93
Identity = 158/230 (68.70%), Postives = 159/230 (69.13%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLAPMLEPSGLL 60
           MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDL PMLE  GLL
Sbjct: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLVPMLESPGLL 60

Query: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMSHGPGIQISTLFDLESS---------------- 120
           PSELSYSCSSGPCSSYGSPTSKPQRSM H P +QISTLFDLESS                
Sbjct: 61  PSELSYSCSSGPCSSYGSPTSKPQRSMRHRPNVQISTLFDLESSVRRAYSFNDLQGRTEM 120

Query: 121 ----------------------------------------------YECRKTLADSRRRI 168
                                                         YECRKTLADSRRRI
Sbjct: 121 ASSSESSLIIEGMSTKACRYSPEEKRQRIEKYKTKRNQRNFNKKIKYECRKTLADSRRRI 180

[Close]

BLAST of Cp4.1LG20g08740 vs. ExPASy TrEMBL
Match: A0A0A0LUR6 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G497300 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 1.17e-49
Identity = 125/247 (50.61%), Postives = 137/247 (55.47%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLA-SDLA--PMLEPS 60
           MH+FS A ++ S+ HL +PDL +SPPL  SFP+F SSHSSSF  LLA S LA  P+LE  
Sbjct: 1   MHSFSPA-VDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSF--LLAYSQLALNPVLESP 60

Query: 61  GLLPSE-LSYSCSSGPCSSYGSPTSKP----QRSMS----------HGPGIQISTLFDL- 120
            LLPSE +SYS SSGPCSSYGSPTS      QRSMS          HGPG +IS+L D  
Sbjct: 61  ELLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTD 120

Query: 121 -----------------------ESS---------------------------------- 166
                                  ESS                                  
Sbjct: 121 MPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFN 180

[Close]

BLAST of Cp4.1LG20g08740 vs. ExPASy TrEMBL
Match: A0A1S3C703 (zinc finger protein CONSTANS-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC103497191 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 8.27e-48
Identity = 125/250 (50.00%), Postives = 138/250 (55.20%), Query Frame = 0


Query: 1   MHAFSSATLEASLCHLPAPDLAMS--PPLLASFPHFISSHSSSFSSLLA-SDLA--PMLE 60
           MH+FS A ++ S+ HL +PDL +S  PPL  SFP+F SSHSSSF  LLA S LA  P+LE
Sbjct: 1   MHSFSPA-VDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSF--LLAYSQLALDPVLE 60

Query: 61  PSGLLPSE-LSYSCSSGPCSSYGSPTSKP----QRSMS----------HGPGIQISTLFD 120
              LLP E +SYS SSGPCSSYGSPTS      QRSMS          HGPG +IS+L D
Sbjct: 61  SPDLLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLID 120

Query: 121 L------------------------ESS-------------------------------- 166
                                    ESS                                
Sbjct: 121 TDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRN 180

[Close]

BLAST of Cp4.1LG20g08740 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-08
Identity = 32/71 (45.07%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 99  FDLESSYECRKTLADSRRRIRGRFARNEEAENSNSTSSPTETWSCYDNAMTEEVGQDDGS 158
           F+    YECRKTLADSR RIRGRFARN+E                    + E V  D  +
Sbjct: 179 FNKRIKYECRKTLADSRPRIRGRFARNDEISQQEQVD------------VMEAVVGDVDT 237

Query: 159 WITFLDSYSVN 170
           W +FLDS+S N
Sbjct: 239 WASFLDSFSAN 237

[Close]

BLAST of Cp4.1LG20g08740 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.5e-04
Identity = 24/38 (63.16%), Postives = 26/38 (68.42%), Query Frame = 0


Query: 105 YECRKTLADSRRRIRGRFARNEE-AENSNSTSSPTETW 142
           Y CRKTLADSR RIRGRFARN+E  E  N     +E W
Sbjct: 237 YACRKTLADSRPRIRGRFARNDEVVEIPNIEDDDSELW 274

[Close]

BLAST of Cp4.1LG20g08740 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 0


Query: 99  FDLESSYECRKTLADSRRRIRGRFARNEEAENSN 133
           F+ +  Y CRKTLADSR R+RGRFA+N+E    N
Sbjct: 327 FNKKIKYACRKTLADSRPRVRGRFAKNDEFGEPN 360

[Close]

BLAST of Cp4.1LG20g08740 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 0


Query: 99  FDLESSYECRKTLADSRRRIRGRFARNEEAENSN 133
           F+ +  Y CRKTLADSR R+RGRFA+N+E    N
Sbjct: 326 FNKKIKYACRKTLADSRPRVRGRFAKNDEFGEPN 359

[Close]

BLAST of Cp4.1LG20g08740 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 42.4 bits (98), Expect = 4.4e-04
Identity = 28/77 (36.36%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 99  FDLESSYECRKTLADSRRRIRGRFARNEEAENSNSTSSPTETWSCYDNAMTEEVGQ---- 158
           F  +  Y CRKTLADSR R+RGRFA+N+E    N  +  +      D+   +E  Q    
Sbjct: 304 FSKKIKYACRKTLADSRPRVRGRFAKNDEFGEPNRQACSSHHEDDDDDVGVKEEEQLVDS 363

Query: 159 -DDGSWITFLDSYSVNF 171
            D  S I+ ++S+  N+
Sbjct: 364 SDIFSHISGVNSFKCNY 380

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g08740 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g08740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583456.1	7.58e-106	88.52	hypothetical protein SDJN03_19388, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022970464.1	2.12e-102	86.89	uncharacterized protein LOC111469436 isoform X2 [Cucurbita maxima]	[more]
KAG7019213.1	2.58e-97	69.23	Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022970463.1	7.14e-94	67.95	zinc finger protein CONSTANS-LIKE 5-like isoform X1 [Cucurbita maxima]	[more]
XP_022964840.1	2.27e-93	68.70	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG20g08740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5K4	1.02e-102	86.89	uncharacterized protein LOC111469436 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I3X3	3.46e-94	67.95	zinc finger protein CONSTANS-LIKE 5-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1HLZ0	1.10e-93	68.70	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LUR6	1.17e-49	50.61	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G497300 PE=4 SV...	[more]
A0A1S3C703	8.27e-48	50.00	zinc finger protein CONSTANS-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC103497191...	[more]

BLAST of Cp4.1LG20g08740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59990.1	3.9e-08	45.07	CCT motif family protein	[more]
AT5G41380.1	1.5e-04	63.16	CCT motif family protein	[more]
AT2G33350.1	3.4e-04	58.82	CCT motif family protein	[more]
AT2G33350.2	3.4e-04	58.82	CCT motif family protein	[more]
AT1G04500.1	4.4e-04	36.36	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 99..125 e-value: 4.0E-9 score: 36.4
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 83..125 score: 8.571651
None	No IPR available	PANTHER	PTHR31319:SF73	CCT MOTIF FAMILY PROTEIN	coord: 105..167
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 105..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g08740.1	Cp4.1LG20g08740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding