Cp4.1LG20g08380 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g08380
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Expansin
Location	Cp4.1LG20: 7443824 .. 7445270 (-)
RNA-Seq Expression	Cp4.1LG20g08380
Synteny	Cp4.1LG20g08380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTAAAATGTTTTGTGGTAAAAAGAAAAGAAAAAAAAAAGAAACAAAAAGTTTCTAGAACTGTTTTCACACACAGACACACAAAAGATTCGACATTAAATGAGGGGTGTAATTGTAAATTCACACAAAAAGACCTCCCCGTCCTCCTCCTCCGTTAAGTACTCCTCCCATTGCCTCTTCCAGATTGAACCAAAAAAATGGCTAAACCCGCCGTCCTCCTCTGCCTTGTGTCTCTCATCTCAGCAATGTGGACGGCCGCTGCTAGAATTCCCGGCGCCTACTCCGGTGGCCCATGGCAGACCGCTCACGCCACCTTCTACGGCGGCTCCGACGCATCCGGCACAATGGGTAGGCTCGAAAATTGAAACAAACAAACAAATGGGTTGAGATTTGGGTTTTGATTTTGAATGGAAAGCTATTTAATCATAAATTATAATTTAACATATATGTCAATTTAATTTTTTTATTATAGACAAATATCTAGATATTCGACTCTACTTCAGATTAAATTTGGTGCTAGTTTTAGCAACATTCTCACTTGGGTCGGTGTGCACTCAGGTGGGGCTTGTGGGTATGGGAATTTGTACAGCCAAGGGTACGGGGTGAACACGGCGGCGCTGAGTACGGCGCTGTTCAACAATGGGCTGAGCTGTGGCGCGTGTTTCGAGATCAAATGTGCGAATGACCCGAGATGGTGCCATTCGGGTAGCCCGTCGATTGTCATAACGGCCACCAACTTCTGCCCGCCCAACTTTGCTCTGCCCAGTGACAATGGCGGCTGGTGTAACCCTCCTCGCCCCCATTTCGATTTGGCCATGCCTATGTTTCTCAAGATCGCTGAATATCGCGCCGGTATCGTCCCCGTCGCCTACCGCCGGTCAGCCTCTTTCTTCCTCTGCCTTTTATTTCTGTTTTCCTTTAAATTACCATTTTACCCCTCTTTTAATTTAATTTATTTTATTTTTAAAAAAAATTTGTAGTTAGTTATATTTAAAATATAGGTAAATTATCTATATTTCGGGTAGCATACACACAATTTACCCTAAATTGATTAATATCGTACTCGATTTTCTAATTTATATATCAATCCATACTTTAAAATTTTATAAATTATCAATTTTAAATTTTTTTTTTTTTTTTTATAAATAACTAAATATATTGAAAAAAGTAGGATCGTAAATAATTCTCTTATAGACGATCAGAACTTAATTCAATGTTCGTAGCTTCCTGTGAATACACCTAAGAAATTGGAATCTGATTATCAATTATAGGAGGTTTTTAGATTAAGTGTGACTTTTGATACCTGTATTAGCGGCAATTAATTTTCTAGCATGCTAAACGATACCCGTTGTAGCTATAGTACATTACTAGAATCCTAAAGAACGAGATTAAAATCGTATACTATAGGGGTTGTCGACGTAGGCAAGAGAGAAGTGAAGTTGGTTAA

mRNA sequence

AGTTAAAATGTTTTGTGGTAAAAAGAAAAGAAAAAAAAAAGAAACAAAAAGTTTCTAGAACTGTTTTCACACACAGACACACAAAAGATTCGACATTAAATGAGGGGTGTAATTGTAAATTCACACAAAAAGACCTCCCCGTCCTCCTCCTCCGTTAAGTACTCCTCCCATTGCCTCTTCCAGATTGAACCAAAAAAATGGCTAAACCCGCCGTCCTCCTCTGCCTTGTGTCTCTCATCTCAGCAATGTGGACGGCCGCTGCTAGAATTCCCGGCGCCTACTCCGGTGGCCCATGGCAGACCGCTCACGCCACCTTCTACGGCGGCTCCGACGCATCCGGCACAATGGGTGGGGCTTGTGGGTATGGGAATTTGTACAGCCAAGGGTACGGGGTGAACACGGCGGCGCTGAGTACGGCGCTGTTCAACAATGGGCTGAGCTGTGGCGCGTGTTTCGAGATCAAATGTGCGAATGACCCGAGATGGTGCCATTCGGGTAGCCCGTCGATTGTCATAACGGCCACCAACTTCTGCCCGCCCAACTTTGCTCTGCCCAGTGACAATGGCGGCTGGTGTAACCCTCCTCGCCCCCATTTCGATTTGGCCATGCCTATGTTTCTCAAGATCGCTGAATATCGCGCCGGTATCGTCCCCGTCGCCTACCGCCGGCAAGAGAGAAGTGAAGTTGGTTAA

Coding sequence (CDS)

ATGGCTAAACCCGCCGTCCTCCTCTGCCTTGTGTCTCTCATCTCAGCAATGTGGACGGCCGCTGCTAGAATTCCCGGCGCCTACTCCGGTGGCCCATGGCAGACCGCTCACGCCACCTTCTACGGCGGCTCCGACGCATCCGGCACAATGGGTGGGGCTTGTGGGTATGGGAATTTGTACAGCCAAGGGTACGGGGTGAACACGGCGGCGCTGAGTACGGCGCTGTTCAACAATGGGCTGAGCTGTGGCGCGTGTTTCGAGATCAAATGTGCGAATGACCCGAGATGGTGCCATTCGGGTAGCCCGTCGATTGTCATAACGGCCACCAACTTCTGCCCGCCCAACTTTGCTCTGCCCAGTGACAATGGCGGCTGGTGTAACCCTCCTCGCCCCCATTTCGATTTGGCCATGCCTATGTTTCTCAAGATCGCTGAATATCGCGCCGGTATCGTCCCCGTCGCCTACCGCCGGCAAGAGAGAAGTGAAGTTGGTTAA

Protein sequence

MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRQERSEVG

Homology

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy Swiss-Prot
Match: Q38865 (Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 275.4 bits (703), Expect = 4.2e-73
Identity = 129/157 (82.17%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MA   ++L +++ I A+  + ARIPG Y+GG W+TAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAMLGLVLSVLTTILAL--SEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNG SCGACFE+KCA+DP+WCHSGSPSI ITATNFCPPNFA PS
Sbjct: 61  SQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 158
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPV++RR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRR 155

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-71
Identity = 128/155 (82.58%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 3   KPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLYSQ 62
           K A+L     L S    A ARIPG YSGG WQ AHATFYGGSDASGTMGGACGYGNLYSQ
Sbjct: 4   KLAILFTTFVLFS---LADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQ 63

Query: 63  GYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPSDN 122
           GYG NTAALSTALFNNG+SCGACFE+KCANDP+WCHSGSPSI+ITATNFCPPN A PSDN
Sbjct: 64  GYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDN 123

Query: 123 GGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 158
           GGWCNPPR HFDLAMP+FLKIA+YRAGIVPV+YRR
Sbjct: 124 GGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRR 155

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy Swiss-Prot
Match: Q852A1 (Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 8.7e-71
Identity = 128/158 (81.01%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 4   PAVLLCLVSLISAMWT--AAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLYS 63
           P VL+ +V+ + A+    AA RIPGAY GG WQ+AHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 5   PRVLVLVVATVVALQVSPAAGRIPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYS 64

Query: 64  QGYGVNTAALSTALFNNGLSCGACFEIKCANDP--RWCHSGSPSIVITATNFCPPNFALP 123
           QGYGVN AALSTALFN+G SCGACFEIKC N P   WCH GSPSI+ITATNFCPPN+ALP
Sbjct: 65  QGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALP 124

Query: 124 SDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 158
           SDNGGWCNPPRPHFDLAMPMFL IAEYRAGIVPV+YRR
Sbjct: 125 SDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRR 162

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy Swiss-Prot
Match: O80932 (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.6e-69
Identity = 125/158 (79.11%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 8   LCLVSLISAMWTAA-ARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLYSQGYGV 67
           L L    S + TA  A+IPG YSGGPWQ AHATFYGGSDASGTMGGACGYGNLYSQGYGV
Sbjct: 10  LWLAVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGV 69

Query: 68  NTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPSDNGGWC 127
           NTAALSTALFNNG SCGACFEIKC +DPRWC  G+PSI++TATNFCPPNFA PSD+GGWC
Sbjct: 70  NTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWC 129

Query: 128 NPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRQERSEVG 165
           NPPR HFDLAMPMFLKI  YRAGIVPV+YRR    ++G
Sbjct: 130 NPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIG 167

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy Swiss-Prot
Match: Q9M2S9 (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.9e-68
Identity = 117/154 (75.97%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 4   PAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLYSQG 63
           P +LL +  L   +    A IP  +SGG WQTAHATFYGG+DASGTMGGACGYGNLYSQG
Sbjct: 5   PLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQG 64

Query: 64  YGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPSDNG 123
           YG NTAALST+LFN+G SCGACFEIKC NDP+WCH G+PS+ +TATNFCPPN A PSDNG
Sbjct: 65  YGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNG 124

Query: 124 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 158
           GWCNPPR HFDLAMP+FLKIAEYRAGIVP++YRR
Sbjct: 125 GWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRR 158

[Close]

BLAST of Cp4.1LG20g08380 vs. NCBI nr
Match: XP_022970561.1 (expansin-A4-like [Cucurbita maxima])

HSP 1 Score: 329 bits (843), Expect = 3.72e-112
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. NCBI nr
Match: XP_023519655.1 (expansin-A4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329 bits (843), Expect = 3.72e-112
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. NCBI nr
Match: XP_022964681.1 (expansin-A4-like [Cucurbita moschata])

HSP 1 Score: 323 bits (828), Expect = 7.15e-110
Identity = 154/157 (98.09%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MA PAVLLCLVSLISAMWTA ARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MANPAVLLCLVSLISAMWTADARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVA+RR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. NCBI nr
Match: KAG6583425.1 (Expansin-A4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019187.1 Expansin-A4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321 bits (822), Expect = 5.86e-109
Identity = 152/157 (96.82%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MA PAV++CLVSLISAMWTA ARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MANPAVVVCLVSLISAMWTADARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVA+RR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. NCBI nr
Match: XP_038895721.1 (expansin-A4-like [Benincasa hispida])

HSP 1 Score: 317 bits (811), Expect = 2.77e-107
Identity = 149/157 (94.90%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MAK A+LLC+VSLIS MW AAARIPG YSGGPW++AHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAKTAILLCIVSLISTMWPAAARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy TrEMBL
Match: A0A6J1I0X5 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111469501 PE=3 SV=1)

HSP 1 Score: 329 bits (843), Expect = 1.80e-112
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy TrEMBL
Match: A0A6J1HJM3 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111464689 PE=3 SV=1)

HSP 1 Score: 323 bits (828), Expect = 3.46e-110
Identity = 154/157 (98.09%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MA PAVLLCLVSLISAMWTA ARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MANPAVLLCLVSLISAMWTADARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVA+RR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy TrEMBL
Match: A0A515MEM7 (Expansin OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 313 bits (803), Expect = 2.21e-106
Identity = 148/157 (94.27%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MAK A+LLC+ SLISA+W AAARIPG YSGG WQ+AHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAKSAILLCIASLISALWPAAARIPGVYSGGSWQSAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy TrEMBL
Match: Q8W5A7 (Expansin OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 313 bits (801), Expect = 4.46e-106
Identity = 147/157 (93.63%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           M K A+LLC+ SLIS MW AAARIPG YSGGPW++AHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MPKTAILLCIASLISTMWPAAARIPGIYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. ExPASy TrEMBL
Match: A0A0A0LVC5 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_1G522540 PE=3 SV=1)

HSP 1 Score: 313 bits (801), Expect = 4.46e-106
Identity = 147/157 (93.63%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           M K A+LLC+ SLIS MW AAARIPG YSGGPW++AHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MPKTAILLCIASLISTMWPAAARIPGIYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 157

[Close]

BLAST of Cp4.1LG20g08380 vs. TAIR 10
Match: AT2G28950.1 (expansin A6 )

HSP 1 Score: 275.4 bits (703), Expect = 3.0e-74
Identity = 129/157 (82.17%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MA   ++L +++ I A+  + ARIPG Y+GG W+TAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAMLGLVLSVLTTILAL--SEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNG SCGACFE+KCA+DP+WCHSGSPSI ITATNFCPPNFA PS
Sbjct: 61  SQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 158
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPV++RR
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRR 155

[Close]

BLAST of Cp4.1LG20g08380 vs. TAIR 10
Match: AT2G39700.1 (expansin A4 )

HSP 1 Score: 270.4 bits (690), Expect = 9.5e-73
Identity = 128/155 (82.58%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 3   KPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLYSQ 62
           K A+L     L S    A ARIPG YSGG WQ AHATFYGGSDASGTMGGACGYGNLYSQ
Sbjct: 4   KLAILFTTFVLFS---LADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQ 63

Query: 63  GYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPSDN 122
           GYG NTAALSTALFNNG+SCGACFE+KCANDP+WCHSGSPSI+ITATNFCPPN A PSDN
Sbjct: 64  GYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDN 123

Query: 123 GGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 158
           GGWCNPPR HFDLAMP+FLKIA+YRAGIVPV+YRR
Sbjct: 124 GGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRR 155

[Close]

BLAST of Cp4.1LG20g08380 vs. TAIR 10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein )

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-70
Identity = 125/158 (79.11%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 8   LCLVSLISAMWTAA-ARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLYSQGYGV 67
           L L    S + TA  A+IPG YSGGPWQ AHATFYGGSDASGTMGGACGYGNLYSQGYGV
Sbjct: 10  LWLAVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGV 69

Query: 68  NTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPSDNGGWC 127
           NTAALSTALFNNG SCGACFEIKC +DPRWC  G+PSI++TATNFCPPNFA PSD+GGWC
Sbjct: 70  NTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWC 129

Query: 128 NPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRQERSEVG 165
           NPPR HFDLAMPMFLKI  YRAGIVPV+YRR    ++G
Sbjct: 130 NPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIG 167

[Close]

BLAST of Cp4.1LG20g08380 vs. TAIR 10
Match: AT3G55500.1 (expansin A16 )

HSP 1 Score: 258.1 bits (658), Expect = 4.9e-69
Identity = 117/154 (75.97%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 4   PAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLYSQG 63
           P +LL +  L   +    A IP  +SGG WQTAHATFYGG+DASGTMGGACGYGNLYSQG
Sbjct: 5   PLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQG 64

Query: 64  YGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPSDNG 123
           YG NTAALST+LFN+G SCGACFEIKC NDP+WCH G+PS+ +TATNFCPPN A PSDNG
Sbjct: 65  YGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNG 124

Query: 124 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 158
           GWCNPPR HFDLAMP+FLKIAEYRAGIVP++YRR
Sbjct: 125 GWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRR 158

[Close]

BLAST of Cp4.1LG20g08380 vs. TAIR 10
Match: AT5G02260.1 (expansin A9 )

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-67
Identity = 119/157 (75.80%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MAKPAVLLCLVSLISAMWTAAARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60
           MA   +    V +++A +TA A+IPG Y+GGPW  AHATFYG +DASGTMGGACGYGNLY
Sbjct: 1   MAAKVITFMAVMVVTA-FTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCG+CFE+KC NDP WC  G+PSI+ITATNFCPPNF   S
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQAS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRR 158
           DNGGWCNPPR HFDLAMPMFL IA+Y+AGIVPV+YRR
Sbjct: 121 DNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRR 156

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g08380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38865	4.2e-73	82.17	Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2	[more]
O48818	1.3e-71	82.58	Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1	[more]
Q852A1	8.7e-71	81.01	Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1	[more]
O80932	1.6e-69	79.11	Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1	[more]
Q9M2S9	6.9e-68	75.97	Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1	[more]

BLAST of Cp4.1LG20g08380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970561.1	3.72e-112	100.00	expansin-A4-like [Cucurbita maxima]	[more]
XP_023519655.1	3.72e-112	100.00	expansin-A4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964681.1	7.15e-110	98.09	expansin-A4-like [Cucurbita moschata]	[more]
KAG6583425.1	5.86e-109	96.82	Expansin-A4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019187.1 Expan...	[more]
XP_038895721.1	2.77e-107	94.90	expansin-A4-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG20g08380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0X5	1.80e-112	100.00	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111469501 PE=3 SV=1	[more]
A0A6J1HJM3	3.46e-110	98.09	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111464689 PE=3 SV=1	[more]
A0A515MEM7	2.21e-106	94.27	Expansin OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
Q8W5A7	4.46e-106	93.63	Expansin OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A0A0LVC5	4.46e-106	93.63	Expansin OS=Cucumis sativus OX=3659 GN=Csa_1G522540 PE=3 SV=1	[more]

BLAST of Cp4.1LG20g08380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28950.1	3.0e-74	82.17	expansin A6	[more]
AT2G39700.1	9.5e-73	82.58	expansin A4	[more]
AT2G37640.1	1.2e-70	79.11	Barwin-like endoglucanases superfamily protein	[more]
AT3G55500.1	4.9e-69	75.97	expansin A16	[more]
AT5G02260.1	1.2e-67	75.80	expansin A9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 50..68 score: 76.97 coord: 32..47 score: 67.97 coord: 148..164 score: 46.62 coord: 72..90 score: 73.29
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 63..77 score: 90.0 coord: 90..101 score: 53.33 coord: 104..114 score: 83.03 coord: 123..140 score: 81.3 coord: 140..153 score: 78.33
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 68..155 e-value: 1.5E-58 score: 210.5
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 51..164 score: 27.907204
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 68..155 e-value: 3.0E-22 score: 78.7
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 19..159 e-value: 9.1E-45 score: 154.1
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 9..157
None	No IPR available	PANTHER	PTHR31867:SF100	EXPANSIN	coord: 6..158
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 6..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g08380.1	Cp4.1LG20g08380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane