Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCATCGTTGAATTCAGGAATGGTTTTCTCTGAAGGTACATACAAAGATGGTTTTTCTGTTTTCTGTTCTTTCAAGTGATTCAATTTTCTTGAGTTTTTTGGTCACGATGTTCCTCGCAGACATAGCCGACGGAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCGATCTCGGTCATTGATGGTGAAGAATCCGATGAAGCTGCTGGATCAGATGACGAAACTTACAGCTCCGATACTCATTTGCACCATTTACCCAACGGTTTCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTGGAGAGAAGGTGCAGTGATGAGGAAGAGGAGGAGAGCATGAGAGAGGCTTCTGATTCAGCGATTAGAATGGCGTTTAGAGAGGATGAGACTCGGAGAAATGCGCCGCTGTCGCCGGAGAATGCGACGAGGATCATGGAGGCCATGCGCGGCATCTCATTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTATCTGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAACCCCTACCTCTCCCAATAATTTCGGAAACTGA
mRNA sequence
ATGAACGCATCGTTGAATTCAGGAATGGTTTTCTCTGAAGACATAGCCGACGGAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCGATCTCGGTCATTGATGGTGAAGAATCCGATGAAGCTGCTGGATCAGATGACGAAACTTACAGCTCCGATACTCATTTGCACCATTTACCCAACGGTTTCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTGGAGAGAAGGTGCAGTGATGAGGAAGAGGAGGAGAGCATGAGAGAGGCTTCTGATTCAGCGATTAGAATGGCGTTTAGAGAGGATGAGACTCGGAGAAATGCGCCGCTGTCGCCGGAGAATGCGACGAGGATCATGGAGGCCATGCGCGGCATCTCATTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTATCTGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAACCCCTACCTCTCCCAATAATTTCGGAAACTGA
Coding sequence (CDS)
ATGAACGCATCGTTGAATTCAGGAATGGTTTTCTCTGAAGACATAGCCGACGGAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCGATCTCGGTCATTGATGGTGAAGAATCCGATGAAGCTGCTGGATCAGATGACGAAACTTACAGCTCCGATACTCATTTGCACCATTTACCCAACGGTTTCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTGGAGAGAAGGTGCAGTGATGAGGAAGAGGAGGAGAGCATGAGAGAGGCTTCTGATTCAGCGATTAGAATGGCGTTTAGAGAGGATGAGACTCGGAGAAATGCGCCGCTGTCGCCGGAGAATGCGACGAGGATCATGGAGGCCATGCGCGGCATCTCATTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTATCTGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAACCCCTACCTCTCCCAATAATTTCGGAAACTGA
Protein sequence
MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHLHHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN
Homology
BLAST of Cp4.1LG20g07750 vs. NCBI nr
Match:
XP_023520169.1 (uncharacterized protein LOC111783470 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 328 bits (841), Expect = 4.31e-113
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
Query: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP
Sbjct: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN
Sbjct: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
BLAST of Cp4.1LG20g07750 vs. NCBI nr
Match:
XP_022970483.1 (uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970485.1 uncharacterized protein LOC111469451 [Cucurbita maxima])
HSP 1 Score: 317 bits (813), Expect = 7.74e-109
Identity = 167/170 (98.24%), Postives = 167/170 (98.24%), Query Frame = 0
Query: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPIS IDGEESDEA GSDDETYSSDTHL
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEA-GSDDETYSSDTHL 60
Query: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
HHLPNG RVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP
Sbjct: 61 HHLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN
Sbjct: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169
BLAST of Cp4.1LG20g07750 vs. NCBI nr
Match:
XP_022964640.1 (uncharacterized protein LOC111464656 [Cucurbita moschata])
HSP 1 Score: 315 bits (807), Expect = 6.37e-108
Identity = 166/170 (97.65%), Postives = 166/170 (97.65%), Query Frame = 0
Query: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPIS IDGEESDEA GSDDE YSSDTHL
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEA-GSDDEPYSSDTHL 60
Query: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
HHLPNG RVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP
Sbjct: 61 HHLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN
Sbjct: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169
BLAST of Cp4.1LG20g07750 vs. NCBI nr
Match:
XP_038894769.1 (uncharacterized protein LOC120083197 [Benincasa hispida])
HSP 1 Score: 290 bits (742), Expect = 5.16e-98
Identity = 153/170 (90.00%), Postives = 160/170 (94.12%), Query Frame = 0
Query: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
MNA+LNSG+VFSE+IADGSDSDTNSAEGSDYYEPIS IDGEESDEA GS++ETYSSD H
Sbjct: 1 MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEA-GSENETYSSDPHF 60
Query: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
HHL NG VENAVSSLSLNDDVERRCSD+EEEE MREASDSAIRMAFREDETRRNAPLSP
Sbjct: 61 HHLSNGCGVENAVSSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+ NNFGN
Sbjct: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNFGN 169
BLAST of Cp4.1LG20g07750 vs. NCBI nr
Match:
XP_008457323.1 (PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo])
HSP 1 Score: 281 bits (718), Expect = 2.35e-94
Identity = 149/170 (87.65%), Postives = 155/170 (91.18%), Query Frame = 0
Query: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
MNA+LNSG+VFSEDI DGSDSDTNSAEGSDYYEPIS IDGEESD A S+DETYSSDTH
Sbjct: 1 MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESD-IAESEDETYSSDTHF 60
Query: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
H LPNG VENAVSSL+LNDDVERRCSD+EEEE MREASDSAIRMAFREDETRRNAPLSP
Sbjct: 61 HQLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
EN TRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPT N+ N
Sbjct: 121 ENTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169
BLAST of Cp4.1LG20g07750 vs. ExPASy TrEMBL
Match:
A0A6J1I3Z1 (uncharacterized protein LOC111469451 OS=Cucurbita maxima OX=3661 GN=LOC111469451 PE=4 SV=1)
HSP 1 Score: 317 bits (813), Expect = 3.75e-109
Identity = 167/170 (98.24%), Postives = 167/170 (98.24%), Query Frame = 0
Query: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPIS IDGEESDEA GSDDETYSSDTHL
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEA-GSDDETYSSDTHL 60
Query: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
HHLPNG RVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP
Sbjct: 61 HHLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN
Sbjct: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169
BLAST of Cp4.1LG20g07750 vs. ExPASy TrEMBL
Match:
A0A6J1HLE1 (uncharacterized protein LOC111464656 OS=Cucurbita moschata OX=3662 GN=LOC111464656 PE=4 SV=1)
HSP 1 Score: 315 bits (807), Expect = 3.08e-108
Identity = 166/170 (97.65%), Postives = 166/170 (97.65%), Query Frame = 0
Query: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPIS IDGEESDEA GSDDE YSSDTHL
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEA-GSDDEPYSSDTHL 60
Query: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
HHLPNG RVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP
Sbjct: 61 HHLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN
Sbjct: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169
BLAST of Cp4.1LG20g07750 vs. ExPASy TrEMBL
Match:
A0A1S3C5C0 (uncharacterized protein LOC103497044 OS=Cucumis melo OX=3656 GN=LOC103497044 PE=4 SV=1)
HSP 1 Score: 281 bits (718), Expect = 1.14e-94
Identity = 149/170 (87.65%), Postives = 155/170 (91.18%), Query Frame = 0
Query: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
MNA+LNSG+VFSEDI DGSDSDTNSAEGSDYYEPIS IDGEESD A S+DETYSSDTH
Sbjct: 1 MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESD-IAESEDETYSSDTHF 60
Query: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
H LPNG VENAVSSL+LNDDVERRCSD+EEEE MREASDSAIRMAFREDETRRNAPLSP
Sbjct: 61 HQLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
EN TRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPT N+ N
Sbjct: 121 ENTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169
BLAST of Cp4.1LG20g07750 vs. ExPASy TrEMBL
Match:
A0A0A0LXQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533510 PE=4 SV=1)
HSP 1 Score: 276 bits (707), Expect = 5.39e-93
Identity = 147/170 (86.47%), Postives = 154/170 (90.59%), Query Frame = 0
Query: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60
MNA+LNSG+VF+EDIADGSDSDTNSAEGSDYYEPIS IDGEESD A S+DETYSSD H
Sbjct: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESD-IAESEDETYSSDPHF 60
Query: 61 HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120
H LPNG VENAVSSL+LNDDVERRCSD+EEEE MR ASDSAIRMAFREDETRRNAPLSP
Sbjct: 61 HQLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSP 120
Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
EN TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTPT N+ GN
Sbjct: 121 ENTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
BLAST of Cp4.1LG20g07750 vs. ExPASy TrEMBL
Match:
A0A5A7UY79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00660 PE=4 SV=1)
HSP 1 Score: 261 bits (666), Expect = 3.01e-86
Identity = 138/157 (87.90%), Postives = 142/157 (90.45%), Query Frame = 0
Query: 14 DIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHLHHLPNGFRVENAV 73
DI DGSDSDTNSAEGSDYYEPIS IDGEESD A S+DETYSSDTH H LPNG VENAV
Sbjct: 48 DIVDGSDSDTNSAEGSDYYEPISAIDGEESD-IAESEDETYSSDTHFHQLPNGCGVENAV 107
Query: 74 SSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPENATRIMEAMRGI 133
SSL+LNDDVERRCSD+EEEE MREASDSAIRMAFREDETRRNAPLSPEN TRIMEAMRGI
Sbjct: 108 SSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGI 167
Query: 134 SFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
SFGGSAPDWTRIVSEDRWIDQLRRLRQTPT N+ N
Sbjct: 168 SFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 203
BLAST of Cp4.1LG20g07750 vs. TAIR 10
Match:
AT1G07020.1 (unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )
HSP 1 Score: 109.4 bits (272), Expect = 2.9e-24
Identity = 75/149 (50.34%), Postives = 90/149 (60.40%), Query Frame = 0
Query: 18 GSDSDTNSAEGS-DYYEPISVIDGEESDEAAGSDDETYSSDTHLHHLPNGF----RVENA 77
GSDSD+NS E S DYYEPIS +D S++ D+E L NG E
Sbjct: 8 GSDSDSNSVEDSQDYYEPISAVDLYNSND----DEEDSYLPIGGDGLSNGHCMIPDAEVG 67
Query: 78 VSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPENATRIMEAMRG 137
+SS+S+ND+ +D EEE + IR AF EDE RR +PL ENA R+MEAMR
Sbjct: 68 ISSISINDN-----TDSEEETETETGPE--IRRAFEEDERRRRSPLVEENAVRVMEAMRA 127
Query: 138 ISFGGSAPDWTRIVSEDRWIDQLRRLRQT 162
ISF G+APDW V+EDRWIDQLRRLR T
Sbjct: 128 ISFPGTAPDWASDVNEDRWIDQLRRLRTT 145
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023520169.1 | 4.31e-113 | 100.00 | uncharacterized protein LOC111783470 [Cucurbita pepo subsp. pepo] | [more] |
XP_022970483.1 | 7.74e-109 | 98.24 | uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharac... | [more] |
XP_022964640.1 | 6.37e-108 | 97.65 | uncharacterized protein LOC111464656 [Cucurbita moschata] | [more] |
XP_038894769.1 | 5.16e-98 | 90.00 | uncharacterized protein LOC120083197 [Benincasa hispida] | [more] |
XP_008457323.1 | 2.35e-94 | 87.65 | PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1I3Z1 | 3.75e-109 | 98.24 | uncharacterized protein LOC111469451 OS=Cucurbita maxima OX=3661 GN=LOC111469451... | [more] |
A0A6J1HLE1 | 3.08e-108 | 97.65 | uncharacterized protein LOC111464656 OS=Cucurbita moschata OX=3662 GN=LOC1114646... | [more] |
A0A1S3C5C0 | 1.14e-94 | 87.65 | uncharacterized protein LOC103497044 OS=Cucumis melo OX=3656 GN=LOC103497044 PE=... | [more] |
A0A0A0LXQ6 | 5.39e-93 | 86.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533510 PE=4 SV=1 | [more] |
A0A5A7UY79 | 3.01e-86 | 87.90 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT1G07020.1 | 2.9e-24 | 50.34 | unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bac... | [more] |