Cp4.1LG20g07280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g07280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	double-stranded RNA-binding protein 2-like
Location	Cp4.1LG20: 6212070 .. 6216862 (+)
RNA-Seq Expression	Cp4.1LG20g07280
Synteny	Cp4.1LG20g07280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTATTTTTTTATTTTTTTTTTCCGCTAAGAAAATTATTGTTTCTCTCTCTTCCCTTTCTGTCTCACGAAAGCCTCAGGGCTCTCTCTCTCTCTCTTCTTTCTCTCTCTGGAAGTGAAGGGGAAAAAACCCTTGAAAACCTTTGATCTTGCCGGATTTTCATCTCCGTCACCGACGACGGTGGGATTCTTCTTCTGTGGTTTTGATTTTTCTGACAGATTGCGGCGGATCGGATTTGGCCTAGGGTTTTTGGTTTCTGTGTGAAGCTCTTTTGGAGGAGGGGGGGAGGAGGTAAATTTGTGAGCTGAGGGGAGGTGTGAGGTGGAGCTGAGACTGAATCGGAGTAGAAATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGTTGCTTCAATCTTCCCTCGTATGCCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTTAAAGCTACTGTTAACTTCAATGGCGAGATCTTTGAATGCCCTCAGTACTGCTCTACTCTTCGTCAGGCCGAGCACTCCGCCGCCGAGGTTGCTTTGAACGCCCTCTCTAACCGTGGTCCCCCTCATTCTCTTGCAGCTAGGATCCTGGTGAGTCCTTTTTTACTTTGATCATATGGTTGTGTTTAGGTTTTACTCTTGTGTCTCGGCTTGCTTCTCTGCTTGATCTTCATTTCTCGGTTGTTTTTAATTCAATGAATTGATGTTACTGTTTGCAGTAGGATTTTCCTCTGCGAGTTGAGAACGTTAGAGATTTGTTTTAGGTTTTTTGTTATGTTAGTGTTCGTTGTGCATTTTGTTCGTGTTCTTCTCCTCTGAGTTTCCTGTTATCATTTCCAGTAAGATAGGGTACACAGAAATTGCACAATCGTACCTGTAGTGCTTAATCCTTGAATATCTTGTTCGGTGGGTTAACTAAGATCTAAAAGAGATGCTTGTTCTGCTCGTTGTGCCCTGGATTGGGTTGGGTTTTTTCCTTTAAATTATGATATGATCTTCGGATCTCTCTGATCGGCCGGAATTCTCTGACTATACCTACGGTTTAGGGTCGTGTTTGAACGAAAAGTATGAACTCGTGACGCCTCTTTGAGGGTCCGTTCCATTAGAGGAGGTATCTAGTTTTGTTTACCTTATTATCTCGGAGCCAGCTGTCGGGAGTAATCTTCTCGGGCAAGTTGGTGTAATTAATTTGCTCATTAATGGGTTTGTCGGTCGTCCAATTGTGTTTTCGGTAGCTCCCAACTTTGGCCCATTTTATTTCTCCGATCTCATAAATGACCAGATGGGTGTCGTAGAAACGGCACGGAACCAAGAATTCAACACCAATTGTGATAAACTTGTTGGAGGCTGAATTTCAGATAGAGATGATTCAAGTAGACCAATTAGAATTTAGGGGGTTGTGTCCATTATTCTTGTTCATACAAGTCTTGGAGGCTTTAAAACTTGGGTATATTCAATAATTTCATGTAATTACTCCTCCCCGCGTTTTTGTACAAATTGTTTGACTAAGCTTTTCTTCTTTGTTGTTCTTTAATTTTATTTCTCTCCTTTTGCCGTTCGAGGAAATGCGTGCATGTGTCTTTGTCAACTTTATTGTGTTTTAAAAACCTTTGTTTATCTTGGTGTTTGAAGAGAGAGATGAGGAATTTTCGGTCGATTTGGGGGTTACTTTTCCATGAACGTCGTTGTGTTCCACTAAGATGAATGTCCTATTGTGAGATCCCATATTGGTTGGAGAGGGAACGAAACATTCCTTATAAGGGTGTGTAAACCTCTCCCTAGCAGACACGTTTTCAAACCTTGAGGGAAAGTCCAGAAGGGAAAGCCCAAAGAGGACAATATCGGCTCGCGATGGGCTTGGGCTTGGGCTTGGGCTGTTACACCTATGGAGCTCTAGGTTCTATGGTATCGCCCTAGTGATTGTTAATGAGGATTTGTTTCCGTTAAGATGCTCAAAATATAAAATATTTTGTTTCTGTTGGTCTCTGAGGCGCACATCCTGGTTAAATGATGTTTCTTAGGTGTATTATTTTTTCATTGCCTTGTTTACATACTTTATCTTTATTTCTCTTTATTGGCTGGTAAAAACTCATTTAATAAAGTTTAATTGGTTTGAGGTTTGTTAACTATGTTTCAAATTCTCTTACCCTTCAGTTAACTTAACTTTCAAAAATAGGAAATAATATCTTTTGAAATTGAAGAATGTATCTGATATTTGATATCACTATTAGCTTCCATGTTGTGGCCTGGTGGGTAAGATTGATGAACAGCACTTCCATTTTATGGAGTCTTACTATGCAAAGCAACAGATTAATGATCTAGTATGGAAGAATTGGAGCTTAGATAGCTTATTATTTGTATACAGCATCACAGAAAAAAACTATGAAATTTACCTTTTAGAATTCAATTGAATTCAGTTTTAAACAGTAGAGGCATTACAAATCGAATTATGATGCTTGTGAGCTTCAAGTTCAGATTACCTCAGGTCAAATGGAATCTGCACTGCTCTCTCTATTAAAGAGTGAGAAAACTTGTTGCAGCTTAGAAATTTTGATCAAATGGAGTCTGCAGTTTTCTCAATACAAACTTAAGTTACAGATTTCTTCAATGTGAAAGTATTATTTAGATGATGAAGATAGTTTTCTGGGCTGCAGATCTCTCAAATGAAATTATTATGTACTACAATACCAACAGCATCTCCCCTCCTCCTGTGCTAAGGCATTACATGCCAACGAACTTGGCTGTCACTCTTGCCATGCTCAAGTCTGAACGTATTTCTAGGTTTAAACACTGCTCTGAGAATATGAAGTACATTATGAATAATTGATAACATGACATGTATCCATACCAGTAGTTTTTATAACTGAGCAATATTTTCTGGTTAGTTTATTCCTTGTACTATCTGCTAAAAAGTAAAATGCATATAAGATATTAGCATTGGCTTATTGTAAAAGAAAAGGTTTATGAATTTGTCAACGTTTCTCTTTTGATGTTGTTCTTTGGTTTGTTAAATGTTCTTGATATGAACCAAAGATGCTGCTATGATATATGCATGAGTAACTTGGCCGATTTTTAGTTTAATTACTTACTACAATCACCTATGATCAGGATGAGACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCGCCATTGCCTCAATATACAACATTCAGATCAGGTCTTGGTCACCTACCTGTTTTTACAGGGATAGTAGAATTGGCTGGAATAACGTTTACTGGAGAACCTGCCAAGAACAAAAAACAAGCAGAGAAGAATGCTGCAATGGCAGCTTGGTCATCATTAAAACAATGTGAGTTTTTATTTCTATTTTTATTTTTTAATATTTGTATGTTACCATGGCTTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACAACAATCCTGGCAAAGAAAGAATAACCCATCTTATTTTGTGCAAATTAATGTATGCAACTGGAACATGGGAGATTAAATTCAAATGGTTTCTCTGCGATATGTTTATTTATTTCCTATGGAAGCAAAGTATCCTGTTCTTAATCTGCTTCTTGCTTAAAAAATCAAATATTCTGGTGTTGAGAATCATTTTGTTTTGATTTTGGCTAGTGGCTAAAGAATCAGCAAGCTCTTCATCAGAACCAGAAAACAATGATGAACTGGAGCAGATCACTATAGCTCGAGCCTTATTGAATTATCGCCAAAAGGAAAAAATGGCAATGTCAAATCCAAATGCAACAATACCATTCCCCAAAAAGCTTCAAATTCAAAGTCCACGGCCAACTAGTCCCCAACGTCCCCCTGCTCCAACATCAAAGATTCTGCCCTTAATTTGCCAAAAAGCAGCTCCTCGCAGCAGAGCTCCCTTTTCAGCTAATAAAATCCCCATCCCACATGCCCAAACTTCTGCACTAGAAGGCTCTGCAACCCCCCGCCCCCAGAAGTTCAGCGCCGGAGCTGCTGCTCTTTCGTATATTCCCGTTCACCAGTATAGGACATCTTGCCATGGCATTGCCCCACCAGTTACAATTAGAACAACAATGCCTGTGTATTCTGCCCCTCCTCTACCACAGCCATTGAAGCTGCCACCACAGCAAGTAATTCGAGTCCCACCGGTACGGATCGCCCCACCGGTTTCCATTAGGCAAGCCATTCCTGTCTTTGCTGCTCCCCCAGTGCGCAAGGAAAATGCTCCTGCAGTTAAAAAAGAAGACTGTCCAGCCCCAGCTGCTCCTAAAGAAAACGTTGCTGCTCCTGCGCCCGTGCCCGTGCCCGTGCCCGTGCCCTCACTGCCCACTGAGTCAGCTGCTGAAGTAGAACAGGATACAACCACATTGGTGAACAGTCAGCAAGAAGCCAAGACATTAGAAAACCTGGAAGAACTCAAAATTTGATGAGGTGATTCATTAGAAAGAGACCGCATAGGGGAGATTGTCGTATGGTTTTGCAGTAATGTTAGGTTATCTCTTCTTGTCTGCATCTTATTTTGAGTGTCAACCTTTTCTCTTTTCTTATTTTTTCGCCCCGTTTTGTTAAAAACTTGAGTTGTTGAGAGGTGGAAAAATTAGTATCAGCATCCCAATGCCATTTCAACAGCAACTGTGTCAACTAATGTACTTACATATTTGTATCTTTGGGCATGCTATCCCATCTTCTCCAAGAACTCTGCTCTAATCTGCATCCCCAAGATCATCTCGATGATCCTTGGGAGCCCTTGGGTGCAATGACATGTTATGTTCGTCACCCAACATGTGAGATCCCACCTTTGTT

mRNA sequence

TTTTTTTATTTTTTTATTTTTTTTTTCCGCTAAGAAAATTATTGTTTCTCTCTCTTCCCTTTCTGTCTCACGAAAGCCTCAGGGCTCTCTCTCTCTCTCTTCTTTCTCTCTCTGGAAGTGAAGGGGAAAAAACCCTTGAAAACCTTTGATCTTGCCGGATTTTCATCTCCGTCACCGACGACGGTGGGATTCTTCTTCTGTGGTTTTGATTTTTCTGACAGATTGCGGCGGATCGGATTTGGCCTAGGGTTTTTGGTTTCTGTGTGAAGCTCTTTTGGAGGAGGGGGGGAGGAGGTAAATTTGTGAGCTGAGGGGAGGTGTGAGGTGGAGCTGAGACTGAATCGGAGTAGAAATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGTTGCTTCAATCTTCCCTCGTATGCCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTTAAAGCTACTGTTAACTTCAATGGCGAGATCTTTGAATGCCCTCAGTACTGCTCTACTCTTCGTCAGGCCGAGCACTCCGCCGCCGAGGTTGCTTTGAACGCCCTCTCTAACCGTGGTCCCCCTCATTCTCTTGCAGCTAGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCGCCATTGCCTCAATATACAACATTCAGATCAGTGGCTAAAGAATCAGCAAGCTCTTCATCAGAACCAGAAAACAATGATGAACTGGAGCAGATCACTATAGCTCGAGCCTTATTGAATTATCGCCAAAAGGAAAAAATGGCAATGTCAAATCCAAATGCAACAATACCATTCCCCAAAAAGCTTCAAATTCAAAGTCCACGGCCAACTAGTCCCCAACGTCCCCCTGCTCCAACATCAAAGATTCTGCCCTTAATTTGCCAAAAAGCAGCTCCTCGCAGCAGAGCTCCCTTTTCAGCTAATAAAATCCCCATCCCACATGCCCAAACTTCTGCACTAGAAGGCTCTGCAACCCCCCGCCCCCAGAAGTTCAGCGCCGGAGCTGCTGCTCTTTCGTATATTCCCGTTCACCAGTATAGGACATCTTGCCATGGCATTGCCCCACCAGTTACAATTAGAACAACAATGCCTGTGTATTCTGCCCCTCCTCTACCACAGCCATTGAAGCTGCCACCACAGCAAGTAATTCGAGTCCCACCGGTACGGATCGCCCCACCGGTTTCCATTAGGCAAGCCATTCCTGTCTTTGCTGCTCCCCCAGTGCGCAAGGAAAATGCTCCTGCAGTTAAAAAAGAAGACTGTCCAGCCCCAGCTGCTCCTAAAGAAAACGTTGCTGCTCCTGCGCCCGTGCCCGTGCCCGTGCCCGTGCCCTCACTGCCCACTGAGTCAGCTGCTGAAGTAGAACAGGATACAACCACATTGGTGAACAGTCAGCAAGAAGCCAAGACATTAGAAAACCTGGAAGAACTCAAAATTTGATGAGGTGATTCATTAGAAAGAGACCGCATAGGGGAGATTGTCGTATGGTTTTGCAGTAATGTTAGGTTATCTCTTCTTGTCTGCATCTTATTTTGAGTGTCAACCTTTTCTCTTTTCTTATTTTTTCGCCCCGTTTTGTTAAAAACTTGAGTTGTTGAGAGGTGGAAAAATTAGTATCAGCATCCCAATGCCATTTCAACAGCAACTGTGTCAACTAATGTACTTACATATTTGTATCTTTGGGCATGCTATCCCATCTTCTCCAAGAACTCTGCTCTAATCTGCATCCCCAAGATCATCTCGATGATCCTTGGGAGCCCTTGGGTGCAATGACATGTTATGTTCGTCACCCAACATGTGAGATCCCACCTTTGTT

Coding sequence (CDS)

ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGTTGCTTCAATCTTCCCTCGTATGCCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTTAAAGCTACTGTTAACTTCAATGGCGAGATCTTTGAATGCCCTCAGTACTGCTCTACTCTTCGTCAGGCCGAGCACTCCGCCGCCGAGGTTGCTTTGAACGCCCTCTCTAACCGTGGTCCCCCTCATTCTCTTGCAGCTAGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCGCCATTGCCTCAATATACAACATTCAGATCAGTGGCTAAAGAATCAGCAAGCTCTTCATCAGAACCAGAAAACAATGATGAACTGGAGCAGATCACTATAGCTCGAGCCTTATTGAATTATCGCCAAAAGGAAAAAATGGCAATGTCAAATCCAAATGCAACAATACCATTCCCCAAAAAGCTTCAAATTCAAAGTCCACGGCCAACTAGTCCCCAACGTCCCCCTGCTCCAACATCAAAGATTCTGCCCTTAATTTGCCAAAAAGCAGCTCCTCGCAGCAGAGCTCCCTTTTCAGCTAATAAAATCCCCATCCCACATGCCCAAACTTCTGCACTAGAAGGCTCTGCAACCCCCCGCCCCCAGAAGTTCAGCGCCGGAGCTGCTGCTCTTTCGTATATTCCCGTTCACCAGTATAGGACATCTTGCCATGGCATTGCCCCACCAGTTACAATTAGAACAACAATGCCTGTGTATTCTGCCCCTCCTCTACCACAGCCATTGAAGCTGCCACCACAGCAAGTAATTCGAGTCCCACCGGTACGGATCGCCCCACCGGTTTCCATTAGGCAAGCCATTCCTGTCTTTGCTGCTCCCCCAGTGCGCAAGGAAAATGCTCCTGCAGTTAAAAAAGAAGACTGTCCAGCCCCAGCTGCTCCTAAAGAAAACGTTGCTGCTCCTGCGCCCGTGCCCGTGCCCGTGCCCGTGCCCTCACTGCCCACTGAGTCAGCTGCTGAAGTAGAACAGGATACAACCACATTGGTGAACAGTCAGCAAGAAGCCAAGACATTAGAAAACCTGGAAGAACTCAAAATTTGA

Protein sequence

MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSAAEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSVAKESASSSSEPENNDELEQITIARALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRAPFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTMPVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPAPAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTLENLEELKI

Homology

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy Swiss-Prot
Match: Q9SKN2 (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE=1 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.3e-95
Identity = 228/427 (53.40%), Postives = 265/427 (62.06%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRS         
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-SNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF KK  +Q+ RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTT 300
               A    I     +ALE  +  RPQ+  A      Y+P+ Q+R+ CHG+APPVTIRT 
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 MPVYSAPPLPQP-----LKLP-----PQQVIRVPPVRIAPPVSIRQAIPVFA-APPVRKE 360
           +PV+SAPP+P P      +LP     P  +   PPVRIAPPV+IR A+PVFA APPVR  
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIR 360

Query: 361 NAPAVKKEDCPAPAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTL 372
              AVK    P   A +  +++   V     +P LP      VE  T T+ + ++ A   
Sbjct: 361 T--AVK----PTVEAGETRISS---VQEKESIPVLPDSLEIGVEGSTITITDCEKTASKE 415

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.7e-80
Identity = 184/351 (52.42%), Postives = 219/351 (62.39%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLP+Y C+REGPDHAPRFKA VNFNGE FE P + +TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVAL AL+ RGP +SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RS         
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              + ++ ASSS+EPE+NDE EQI IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTS-PQRPPAPTSKILPLICQKAAPRSR 240
           ALLNYR KEKMAM+N     PFPKK  +Q  R T+ PQ   +  SKILPL   K+  RSR
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 APFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTT 300
               A       A  +    + +P P+     A A  Y+PV  +R  CH +APPVT+RT+
Sbjct: 241 PESPAAS---DAASQTPFRPTESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTS 300

Query: 301 MPVYSAPPLPQP----LKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVR 303
           +PV+SAPPLP P     +LPP  +   PP+R+A PV IR A P+F    V+
Sbjct: 301 IPVFSAPPLPPPGARTQQLPP-LMSHPPPIRMASPVRIRPAPPLFTPSAVQ 347

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-46
Identity = 116/227 (51.10%), Postives = 132/227 (58.15%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGE FE P +CSTLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALN LS RGP  SLAA++LDETG+YKNLLQE A R G  LP YTT RS         
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 --------------------------------------VAKESASSSSEPENNDELEQIT 180
                                                 V + S+SS     ++D+ EQI 
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.2e-44
Identity = 141/359 (39.28%), Postives = 180/359 (50.14%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSY C REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFR---------- 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ R          
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 --------SVAKESASSSSEPENN--------------------DELEQITIARALLNYR 180
                   S   ESA +  + E N                    +E EQ  +AR L  +R
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPRLDPLRGEEKEQEIVARVLSRFR 180

Query: 181 QKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRAPFSANK 240
            KE +    PN +    ++  I++ R    Q     T+    L+C+K    +     A+ 
Sbjct: 181 PKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLYTNEAS- 240

Query: 241 IPIPHAQTSALEGSATPRPQKFSAGAAALS--YIPVHQYRTSCHGIA----------PPV 300
                        S++P PQ+F      L+     V      C   A          P +
Sbjct: 241 -------------SSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEM 300

Query: 301 TIRTTMPVYSAPPLPQPL--KLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAP 308
            I+T+ P   +  + +    KL P     +   ++AP V IR  IPV +APP +    P
Sbjct: 301 RIKTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNP 337

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy Swiss-Prot
Match: Q8GY79 (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-43
Identity = 139/346 (40.17%), Postives = 166/346 (47.98%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RS         
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 ---------VAKESASSSSEPENN-------------------DELEQITIARALLNYRQ 180
                       ESA +  + E N                   +E EQ  +AR L  ++ 
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKMSSLDSQDEEKEQEAVARVLSRFKP 180

Query: 181 KEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRAPFSANKI 240
           KE       N           Q  R TS Q+       I  L          +  S+   
Sbjct: 181 KEVRRRETTN-----------QWRRRTS-QQDSNKDLLIERLRWINLLTNQASSSSSTST 240

Query: 241 PIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVT---------IRT 300
           P  H  +S +     P P K S     L +I  ++ R+S        T           T
Sbjct: 241 PNQHKNSSFISLIPPPPPPKSS---KILPFIQQYKDRSSQEAKTETATEMINSKAKVNET 300

[Close]

BLAST of Cp4.1LG20g07280 vs. NCBI nr
Match: XP_023519811.1 (double-stranded RNA-binding protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 690 bits (1780), Expect = 9.20e-249
Identity = 371/416 (89.18%), Postives = 372/416 (89.42%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTLENLEELKI 372
           PAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTLENLEELKI
Sbjct: 361 PAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTLENLEELKI 416

[Close]

BLAST of Cp4.1LG20g07280 vs. NCBI nr
Match: KAG6583583.1 (Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019284.1 Double-stranded RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 672 bits (1733), Expect = 1.15e-241
Identity = 364/416 (87.50%), Postives = 365/416 (87.74%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTLENLEELKI 372
           PAAPKENVAAPAPVPVP P    PTES AEVEQDTTTLVNSQQE KTLENLEELKI
Sbjct: 361 PAAPKENVAAPAPVPVPSP----PTESPAEVEQDTTTLVNSQQETKTLENLEELKI 412

[Close]

BLAST of Cp4.1LG20g07280 vs. NCBI nr
Match: XP_022970315.1 (double-stranded RNA-binding protein 2-like [Cucurbita maxima])

HSP 1 Score: 664 bits (1713), Expect = 1.18e-238
Identity = 359/416 (86.30%), Postives = 362/416 (87.02%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTLENLEELKI 372
           P APKEN+AAPAPVP P      PTES AEVEQDTTTLVNS+QE KTLENLEELKI
Sbjct: 361 PTAPKENLAAPAPVPTP------PTESPAEVEQDTTTLVNSRQETKTLENLEELKI 410

[Close]

BLAST of Cp4.1LG20g07280 vs. NCBI nr
Match: XP_022964903.1 (double-stranded RNA-binding protein 2-like [Cucurbita moschata])

HSP 1 Score: 660 bits (1702), Expect = 5.82e-237
Identity = 361/417 (86.57%), Postives = 363/417 (87.05%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKENVAAPAPVPVPVPVPSLPTESAAEV-EQDTTTLVNSQQEAKTLENLEELKI 372
           PAAPKEN+AAPAPVP P       TES AEV EQDTTTLVNSQQEAKTLENLEELKI
Sbjct: 361 PAAPKENLAAPAPVPSPR------TESPAEVVEQDTTTLVNSQQEAKTLENLEELKI 411

[Close]

BLAST of Cp4.1LG20g07280 vs. NCBI nr
Match: XP_038894734.1 (double-stranded RNA-binding protein 2 [Benincasa hispida])

HSP 1 Score: 598 bits (1543), Expect = 1.81e-212
Identity = 334/431 (77.49%), Postives = 347/431 (80.51%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFSANKIPIP +QT  LEGS T R QKFSAGAA LSYIPV Q+RTSCHGIAPPVTIRT M
Sbjct: 241 PFSANKIPIPQSQTPTLEGSGT-RAQKFSAGAA-LSYIPVQQFRTSCHGIAPPVTIRTAM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PVYSAPPLPQP KLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKEN P VKKE+CPA
Sbjct: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPA 360

Query: 361 PAAPKENVAA---------------PAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEA 372
           PAAPK++  A               P+P  V  PVPSLPT S  EVE+ T+T+VNSQQE 
Sbjct: 361 PAAPKDDPTALSASVPSPTTVSPPVPSPSTVSPPVPSLPTVSPPEVEEATSTVVNSQQET 420

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy TrEMBL
Match: A0A6J1I2I8 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469315 PE=4 SV=1)

HSP 1 Score: 664 bits (1713), Expect = 5.73e-239
Identity = 359/416 (86.30%), Postives = 362/416 (87.02%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTLENLEELKI 372
           P APKEN+AAPAPVP P      PTES AEVEQDTTTLVNS+QE KTLENLEELKI
Sbjct: 361 PTAPKENLAAPAPVPTP------PTESPAEVEQDTTTLVNSRQETKTLENLEELKI 410

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy TrEMBL
Match: A0A6J1HMA2 (double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464869 PE=4 SV=1)

HSP 1 Score: 660 bits (1702), Expect = 2.82e-237
Identity = 361/417 (86.57%), Postives = 363/417 (87.05%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKENVAAPAPVPVPVPVPSLPTESAAEV-EQDTTTLVNSQQEAKTLENLEELKI 372
           PAAPKEN+AAPAPVP P       TES AEV EQDTTTLVNSQQEAKTLENLEELKI
Sbjct: 361 PAAPKENLAAPAPVPSPR------TESPAEVVEQDTTTLVNSQQEAKTLENLEELKI 411

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy TrEMBL
Match: A0A0A0LSF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1)

HSP 1 Score: 596 bits (1537), Expect = 4.17e-212
Identity = 333/417 (79.86%), Postives = 345/417 (82.73%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFSANKIPIP +QT ALEGS  PRPQKFSAG A LSYIPV Q+RTSCHGIAPPVTIRT M
Sbjct: 241 PFSANKIPIPQSQTPALEGSG-PRPQKFSAGTA-LSYIPVQQFRTSCHGIAPPVTIRTAM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PV+SAPPLPQP KLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPPVRKEN P VKKE+CPA
Sbjct: 301 PVFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPA 360

Query: 361 PAAPKENVAAPAPVPVPVPVPSLPTE-SAAEVEQDTTTLVNSQQEAKTLENLEELKI 372
           PAAPKE+  A +  PV V VPS PT  S AEVEQ T T+VNS +E KTLENLEELKI
Sbjct: 361 PAAPKEDPPALS-APVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 414

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy TrEMBL
Match: A0A6J1DHJ7 (double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111020530 PE=4 SV=1)

HSP 1 Score: 594 bits (1532), Expect = 1.73e-211
Identity = 331/416 (79.57%), Postives = 341/416 (81.97%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFS NKI IP +QT ALEGS T RPQKFSAGAA LSYIPV Q+RTSCHGIAPPVTIRTTM
Sbjct: 241 PFSTNKISIPQSQTPALEGSGT-RPQKFSAGAA-LSYIPVPQFRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PVYSAPPLPQP KLPPQQVIRVPPVRIAPPVSIRQA+PVFAAPPVRKEN P V+KED PA
Sbjct: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAVPVFAAPPVRKENPPVVRKEDFPA 360

Query: 361 PAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTLENLEELKI 372
             APKE+       P  +P PS PT S AEVEQ TT + NSQQE+KTLENLE+LKI
Sbjct: 361 --APKED-------PPVIPAPSPPTTSPAEVEQATTAVANSQQESKTLENLEQLKI 405

[Close]

BLAST of Cp4.1LG20g07280 vs. ExPASy TrEMBL
Match: A0A5A7TEV1 (Double-stranded RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00360 PE=4 SV=1)

HSP 1 Score: 592 bits (1526), Expect = 1.83e-210
Identity = 330/417 (79.14%), Postives = 342/417 (82.01%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS         
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300
           PFSANKIPI  +QT  LEGS  PRPQKFSAG A LSYIPV Q+RTSCHGIAPPVTIRT M
Sbjct: 241 PFSANKIPISQSQTPVLEGSG-PRPQKFSAGTA-LSYIPVQQFRTSCHGIAPPVTIRTAM 300

Query: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360
           PV+SAPPLPQP KLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPPVRKEN P VKKE+CPA
Sbjct: 301 PVFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPA 360

Query: 361 PAAPKENVAAPAPVPVPVPVPSLPTE-SAAEVEQDTTTLVNSQQEAKTLENLEELKI 372
           PAAPKE+   P  +  PV VPS PT  S AEVEQ T T+VNS +E KTLENLEELKI
Sbjct: 361 PAAPKED---PPALSAPVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 412

[Close]

BLAST of Cp4.1LG20g07280 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 350.5 bits (898), Expect = 1.6e-96
Identity = 228/427 (53.40%), Postives = 265/427 (62.06%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRS         
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 -----------------------------------VAKESASSSSEPENNDELEQITIAR 180
                                              +AKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-SNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF KK  +Q+ RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTT 300
               A    I     +ALE  +  RPQ+  A      Y+P+ Q+R+ CHG+APPVTIRT 
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 MPVYSAPPLPQP-----LKLP-----PQQVIRVPPVRIAPPVSIRQAIPVFA-APPVRKE 360
           +PV+SAPP+P P      +LP     P  +   PPVRIAPPV+IR A+PVFA APPVR  
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIR 360

Query: 361 NAPAVKKEDCPAPAAPKENVAAPAPVPVPVPVPSLPTESAAEVEQDTTTLVNSQQEAKTL 372
              AVK    P   A +  +++   V     +P LP      VE  T T+ + ++ A   
Sbjct: 361 T--AVK----PTVEAGETRISS---VQEKESIPVLPDSLEIGVEGSTITITDCEKTASKE 415

[Close]

BLAST of Cp4.1LG20g07280 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 179.1 bits (453), Expect = 6.5e-45
Identity = 141/359 (39.28%), Postives = 180/359 (50.14%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSY C REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFR---------- 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ R          
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 --------SVAKESASSSSEPENN--------------------DELEQITIARALLNYR 180
                   S   ESA +  + E N                    +E EQ  +AR L  +R
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPRLDPLRGEEKEQEIVARVLSRFR 180

Query: 181 QKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRAPFSANK 240
            KE +    PN +    ++  I++ R    Q     T+    L+C+K    +     A+ 
Sbjct: 181 PKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLYTNEAS- 240

Query: 241 IPIPHAQTSALEGSATPRPQKFSAGAAALS--YIPVHQYRTSCHGIA----------PPV 300
                        S++P PQ+F      L+     V      C   A          P +
Sbjct: 241 -------------SSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEM 300

Query: 301 TIRTTMPVYSAPPLPQPL--KLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAP 308
            I+T+ P   +  + +    KL P     +   ++AP V IR  IPV +APP +    P
Sbjct: 301 RIKTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNP 337

[Close]

BLAST of Cp4.1LG20g07280 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 179.1 bits (453), Expect = 6.5e-45
Identity = 141/359 (39.28%), Postives = 180/359 (50.14%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSY C REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFR---------- 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ R          
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 --------SVAKESASSSSEPENN--------------------DELEQITIARALLNYR 180
                   S   ESA +  + E N                    +E EQ  +AR L  +R
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPRLDPLRGEEKEQEIVARVLSRFR 180

Query: 181 QKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRAPFSANK 240
            KE +    PN +    ++  I++ R    Q     T+    L+C+K    +     A+ 
Sbjct: 181 PKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLYTNEAS- 240

Query: 241 IPIPHAQTSALEGSATPRPQKFSAGAAALS--YIPVHQYRTSCHGIA----------PPV 300
                        S++P PQ+F      L+     V      C   A          P +
Sbjct: 241 -------------SSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEM 300

Query: 301 TIRTTMPVYSAPPLPQPL--KLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAP 308
            I+T+ P   +  + +    KL P     +   ++AP V IR  IPV +APP +    P
Sbjct: 301 RIKTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNP 337

[Close]

BLAST of Cp4.1LG20g07280 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 178.7 bits (452), Expect = 8.5e-45
Identity = 139/346 (40.17%), Postives = 166/346 (47.98%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRS--------- 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RS         
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 ---------VAKESASSSSEPENN-------------------DELEQITIARALLNYRQ 180
                       ESA +  + E N                   +E EQ  +AR L  ++ 
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKMSSLDSQDEEKEQEAVARVLSRFKP 180

Query: 181 KEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRAPFSANKI 240
           KE       N           Q  R TS Q+       I  L          +  S+   
Sbjct: 181 KEVRRRETTN-----------QWRRRTS-QQDSNKDLLIERLRWINLLTNQASSSSSTST 240

Query: 241 PIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVT---------IRT 300
           P  H  +S +     P P K S     L +I  ++ R+S        T           T
Sbjct: 241 PNQHKNSSFISLIPPPPPPKSS---KILPFIQQYKDRSSQEAKTETATEMINSKAKVNET 300

[Close]

BLAST of Cp4.1LG20g07280 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 86.3 bits (212), Expect = 5.8e-17
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           +YK QLQ  A +    LP YA  REGP HAPRF+  V F G+ F+  ++  TL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSVAKESASSS 120
           A++A+ +L+ + P     A        YKNLLQEIAQ+  + LP Y T  S    + + +
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 SEPENNDEL----EQITIARALLNYRQKEKMAMSNPNA------TIPFPKKLQIQSPRPT 180
           S  E   ++    E  T   A ++  +   M++ N N+      T+P  ++  + S   +
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQEDVNSNVKS 183

Query: 181 SPQR-PPAPTSKIL 184
           SPQ     P+SK++
Sbjct: 184 SPQEIHSQPSSKVV 189

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g07280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN2	2.3e-95	53.40	Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE...	[more]
Q9AV50	2.7e-80	52.42	Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DKP4	1.5e-46	51.10	Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9LJF5	9.2e-44	39.28	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE...	[more]
Q8GY79	1.2e-43	40.17	Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE...	[more]

BLAST of Cp4.1LG20g07280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519811.1	9.20e-249	89.18	double-stranded RNA-binding protein 2 [Cucurbita pepo subsp. pepo]	[more]
KAG6583583.1	1.15e-241	87.50	Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022970315.1	1.18e-238	86.30	double-stranded RNA-binding protein 2-like [Cucurbita maxima]	[more]
XP_022964903.1	5.82e-237	86.57	double-stranded RNA-binding protein 2-like [Cucurbita moschata]	[more]
XP_038894734.1	1.81e-212	77.49	double-stranded RNA-binding protein 2 [Benincasa hispida]	[more]

BLAST of Cp4.1LG20g07280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2I8	5.73e-239	86.30	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1HMA2	2.82e-237	86.57	double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0LSF2	4.17e-212	79.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1	[more]
A0A6J1DHJ7	1.73e-211	79.57	double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7TEV1	1.83e-210	79.14	Double-stranded RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Cp4.1LG20g07280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28380.1	1.6e-96	53.40	dsRNA-binding protein 2	[more]
AT3G26932.1	6.5e-45	39.28	dsRNA-binding protein 3	[more]
AT3G26932.2	6.5e-45	39.28	dsRNA-binding protein 3	[more]
AT5G41070.1	8.5e-45	40.17	dsRNA-binding protein 5	[more]
AT3G62800.1	5.8e-17	34.02	double-stranded-RNA-binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 2..69 e-value: 2.6E-19 score: 80.1
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 2..68 e-value: 4.1E-15 score: 56.3
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 1..70 score: 11.77117
None	No IPR available	GENE3D	3.30.160.20		coord: 1..68 e-value: 2.6E-22 score: 80.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..338
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 1..111
None	No IPR available	PANTHER	PTHR46031:SF7	DOUBLE-STRANDED RNA-BINDING PROTEIN 2-LIKE	coord: 112..356
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 112..356
None	No IPR available	PANTHER	PTHR46031:SF7	DOUBLE-STRANDED RNA-BINDING PROTEIN 2-LIKE	coord: 1..111
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 2..69
IPR044450	AtDRB-like, first double-stranded RNA binding domain, plant	CDD	cd19907	DSRM_AtDRB-like_rpt1	coord: 1..69 e-value: 3.81105E-42 score: 139.918

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g07280.1	Cp4.1LG20g07280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0070919	production of siRNA involved in gene silencing by small RNA
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003725	double-stranded RNA binding