Cp4.1LG20g07020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g07020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ecdysone receptor
Location	Cp4.1LG20: 5757573 .. 5758598 (-)
RNA-Seq Expression	Cp4.1LG20g07020
Synteny	Cp4.1LG20g07020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATTCCAAAGAAGCCTCGATCAAAGAGACCACCAAAAAAGTCGATTCTCTAAGCCATAGAAACAATATCAACTTTGAAACTTCACCATTTCTCAGATCAAACACAAAAAAGATGCAGAAAATACAGAGTTTTCATCTTCTCCACTCTGTTCTGTTCTTCAATTTCTTCTTGTGTTCATCCAAAACTGACCCAATTTCTTGTGGTAAAATCCAAATTCAATCCCCTTTCTTGAGTTCTTCCAATCCATTAAGCCATATGATTCTTTGCAGATCTCACAAACTATATTTCAGAACTTCAATAGGCCTTTTCCCCATCTCCCAAATCGATTACACCACCAAAACACTTATAATCTCTCATGTTCCTTCTTCTTCTTCAACCCATTTTGTGTCCCCTGCCCTTCTATCCTCAGGCCTTCCTTCTCCACCAAACCTCATAAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAAACCCATCTCTCAAAACTGCCCAAAATTTGAAGCTTTACAAAATCAAGAACAATCCCAGAAGCCATCTTGTTTGATCCTTGAAGATCTTGGAGATTTGAAGCAGAGCTTCCATCCAAATGACTTGAAATGCTCCAATTTCATAAGGGTTTATAGAAACTCCTCAGATTTTGGCCTCAGAAATGGGTATAAATTGGGGACTTCCATCTCTTTTGACATTCCTGATCATGTTCCTAATCCGTGTAAGGAGTGTGAGAAGGCTGATGGGCATTGTGGAGTGGGGTTGAGATGCTTATGCCATGTTGTTGAGTGCAGTAAGTTTCTGATTCTCTGATTTTACCATGAAAAAGCTTTAACTTTTTGATAGTTACTGCCTTTTTCTATGATTTTGCAGAAGATAAGGTGTTTTCTGAGGGTGGGATTGTGAGACCTGGCGGTAAATTTCTCCTTTCTTTGCTGCCTGTTTTTGTGATGATTATCTAAAGGAAACCTTGATATGCATAAAAACTTGGTTTGTTTATTTGTATTGACTTATTTCTTTTGCATTAAGTAAT

mRNA sequence

TGGATTCCAAAGAAGCCTCGATCAAAGAGACCACCAAAAAAGTCGATTCTCTAAGCCATAGAAACAATATCAACTTTGAAACTTCACCATTTCTCAGATCAAACACAAAAAAGATGCAGAAAATACAGAGTTTTCATCTTCTCCACTCTGTTCTGTTCTTCAATTTCTTCTTGTGTTCATCCAAAACTGACCCAATTTCTTGTGGTAAAATCCAAATTCAATCCCCTTTCTTGAGTTCTTCCAATCCATTAAGCCATATGATTCTTTGCAGATCTCACAAACTATATTTCAGAACTTCAATAGGCCTTTTCCCCATCTCCCAAATCGATTACACCACCAAAACACTTATAATCTCTCATGTTCCTTCTTCTTCTTCAACCCATTTTGTGTCCCCTGCCCTTCTATCCTCAGGCCTTCCTTCTCCACCAAACCTCATAAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAAACCCATCTCTCAAAACTGCCCAAAATTTGAAGCTTTACAAAATCAAGAACAATCCCAGAAGCCATCTTGTTTGATCCTTGAAGATCTTGGAGATTTGAAGCAGAGCTTCCATCCAAATGACTTGAAATGCTCCAATTTCATAAGGGTTTATAGAAACTCCTCAGATTTTGGCCTCAGAAATGGGTATAAATTGGGGACTTCCATCTCTTTTGACATTCCTGATCATGTTCCTAATCCGTGTAAGGAGTGTGAGAAGGCTGATGGGCATTGTGGAGTGGGGTTGAGATGCTTATGCCATGTTGTTGAGTGCAAAGATAAGGTGTTTTCTGAGGGTGGGATTGTGAGACCTGGCGGTAAATTTCTCCTTTCTTTGCTGCCTGTTTTTGTGATGATTATCTAAAGGAAACCTTGATATGCATAAAAACTTGGTTTGTTTATTTGTATTGACTTATTTCTTTTGCATTAAGTAAT

Coding sequence (CDS)

ATGCAGAAAATACAGAGTTTTCATCTTCTCCACTCTGTTCTGTTCTTCAATTTCTTCTTGTGTTCATCCAAAACTGACCCAATTTCTTGTGGTAAAATCCAAATTCAATCCCCTTTCTTGAGTTCTTCCAATCCATTAAGCCATATGATTCTTTGCAGATCTCACAAACTATATTTCAGAACTTCAATAGGCCTTTTCCCCATCTCCCAAATCGATTACACCACCAAAACACTTATAATCTCTCATGTTCCTTCTTCTTCTTCAACCCATTTTGTGTCCCCTGCCCTTCTATCCTCAGGCCTTCCTTCTCCACCAAACCTCATAAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAAACCCATCTCTCAAAACTGCCCAAAATTTGAAGCTTTACAAAATCAAGAACAATCCCAGAAGCCATCTTGTTTGATCCTTGAAGATCTTGGAGATTTGAAGCAGAGCTTCCATCCAAATGACTTGAAATGCTCCAATTTCATAAGGGTTTATAGAAACTCCTCAGATTTTGGCCTCAGAAATGGGTATAAATTGGGGACTTCCATCTCTTTTGACATTCCTGATCATGTTCCTAATCCGTGTAAGGAGTGTGAGAAGGCTGATGGGCATTGTGGAGTGGGGTTGAGATGCTTATGCCATGTTGTTGAGTGCAAAGATAAGGTGTTTTCTGAGGGTGGGATTGTGAGACCTGGCGGTAAATTTCTCCTTTCTTTGCTGCCTGTTTTTGTGATGATTATCTAA

Protein sequence

MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTKPISQNCPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGKFLLSLLPVFVMII

Homology

[Close]

BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: XP_023519853.1 (uncharacterized protein LOC111783183 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 524 bits (1350), Expect = 6.11e-188
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120

Query: 121 KPISQNCPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGLR 180
           KPISQNCPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGLR
Sbjct: 121 KPISQNCPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGLR 180

Query: 181 NGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGK 240
           NGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGK
Sbjct: 181 NGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGK 240

Query: 241 FLLSLLPVFVMII 253
           FLLSLLPVFVMII
Sbjct: 241 FLLSLLPVFVMII 253

[Close]

BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: XP_022970339.1 (uncharacterized protein LOC111469332 [Cucurbita maxima])

HSP 1 Score: 499 bits (1284), Expect = 9.48e-178
Identity = 245/254 (96.46%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQ PFLSSSNPLSHMILCRS KLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHV +SSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHV-TSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120

Query: 121 KPISQNCPKFEALQNQEQ-SQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGL 180
           KPISQNCPKFEALQNQEQ SQKPSCLILEDLGDLKQSFHPNDLKCSNFIRV+RNSSDFGL
Sbjct: 121 KPISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGL 180

Query: 181 RNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGG 240
           RNGYKLGTSISFDIPDH+PNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGG
Sbjct: 181 RNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGG 240

Query: 241 KFLLSLLPVFVMII 253
           KFLLS L VFVMII
Sbjct: 241 KFLLSYLAVFVMII 253

[Close]

BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: XP_022930045.1 (uncharacterized protein LOC111436512 [Cucurbita moschata])

HSP 1 Score: 498 bits (1283), Expect = 1.00e-177
Identity = 245/256 (95.70%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSS+PLSHMILCRSHKLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSSPLSHMILCRSHKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNL NSLLLFHCSNPT
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLTNSLLLFHCSNPT 120

Query: 121 KPIS---QNCPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDF 180
           KPIS   QNCPKFEAL+   +SQKPSCLILEDLGDLKQSF+PNDLKCSNFIRVYRNSSDF
Sbjct: 121 KPISESFQNCPKFEALR---ESQKPSCLILEDLGDLKQSFNPNDLKCSNFIRVYRNSSDF 180

Query: 181 GLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRP 240
           GLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRP
Sbjct: 181 GLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRP 240

Query: 241 GGKFLLSLLPVFVMII 253
           GGKFLLSLLPVFVMII
Sbjct: 241 GGKFLLSLLPVFVMII 253

[Close]

BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: KAG7029858.1 (hypothetical protein SDJN02_08201, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498 bits (1283), Expect = 1.21e-177
Identity = 245/256 (95.70%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSS+PLSHMILCRSHKLYFR
Sbjct: 6   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSSPLSHMILCRSHKLYFR 65

Query: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNL NSLLLFHCSNPT
Sbjct: 66  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLTNSLLLFHCSNPT 125

Query: 121 KPIS---QNCPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDF 180
           KPIS   QNCPKFEAL+   +SQKPSCLILEDLGDLKQSF+PNDLKCSNFIRVYRNSSDF
Sbjct: 126 KPISESFQNCPKFEALR---ESQKPSCLILEDLGDLKQSFNPNDLKCSNFIRVYRNSSDF 185

Query: 181 GLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRP 240
           GLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRP
Sbjct: 186 GLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRP 245

Query: 241 GGKFLLSLLPVFVMII 253
           GGKFLLSLLPVFVMII
Sbjct: 246 GGKFLLSLLPVFVMII 258

[Close]

BLAST of Cp4.1LG20g07020 vs. NCBI nr
Match: KAE8652799.1 (hypothetical protein Csa_022847 [Cucumis sativus])

HSP 1 Score: 410 bits (1053), Expect = 2.00e-142
Identity = 209/267 (78.28%), Postives = 230/267 (86.14%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSS---KTDPISCGKIQIQSPFLSSSN-----PLSHMILC 60
           MQKIQSFHLL S LF NF LCSS   + DP SCGK QIQ PFLSSSN     PL+H+ILC
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 61  RSHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLL 120
           RS KLYFRTSIGLFPIS+IDYTTKTLIIS+  SSS  HFVSP+LLSSGLPSPP+LINSLL
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSH-HFVSPSLLSSGLPSPPHLINSLL 120

Query: 121 LFHCSNPTKPIS---QNCPKFEALQNQEQ---SQKPSCLILEDLGDLKQSFHPNDLKCSN 180
           LF+CSNPTKPI+   QNCPKFEALQNQ++   SQK SCLI EDLG L++SFHPNDLKCS+
Sbjct: 121 LFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSH 180

Query: 181 FIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKD 240
           F RVYRNSSD  L+NGYKLGTSISFDIPDHVPNPC ECEK DGHCGVGLRC+CHV++CKD
Sbjct: 181 FRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKD 240

Query: 241 KVFSEGGIVRPGGKFLLSLLPVFVMII 253
           KVFS+GGIVRP GKFL+SLL VFV+II
Sbjct: 241 KVFSKGGIVRPCGKFLISLLAVFVVII 266

[Close]

BLAST of Cp4.1LG20g07020 vs. ExPASy TrEMBL
Match: A0A6J1I584 (uncharacterized protein LOC111469332 OS=Cucurbita maxima OX=3661 GN=LOC111469332 PE=4 SV=1)

HSP 1 Score: 499 bits (1284), Expect = 4.59e-178
Identity = 245/254 (96.46%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQ PFLSSSNPLSHMILCRS KLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHV +SSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHV-TSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120

Query: 121 KPISQNCPKFEALQNQEQ-SQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGL 180
           KPISQNCPKFEALQNQEQ SQKPSCLILEDLGDLKQSFHPNDLKCSNFIRV+RNSSDFGL
Sbjct: 121 KPISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGL 180

Query: 181 RNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGG 240
           RNGYKLGTSISFDIPDH+PNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGG
Sbjct: 181 RNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGG 240

Query: 241 KFLLSLLPVFVMII 253
           KFLLS L VFVMII
Sbjct: 241 KFLLSYLAVFVMII 253

[Close]

BLAST of Cp4.1LG20g07020 vs. ExPASy TrEMBL
Match: A0A6J1EVX8 (uncharacterized protein LOC111436512 OS=Cucurbita moschata OX=3662 GN=LOC111436512 PE=4 SV=1)

HSP 1 Score: 498 bits (1283), Expect = 4.86e-178
Identity = 245/256 (95.70%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSS+PLSHMILCRSHKLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSSPLSHMILCRSHKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNL NSLLLFHCSNPT
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLTNSLLLFHCSNPT 120

Query: 121 KPIS---QNCPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDF 180
           KPIS   QNCPKFEAL+   +SQKPSCLILEDLGDLKQSF+PNDLKCSNFIRVYRNSSDF
Sbjct: 121 KPISESFQNCPKFEALR---ESQKPSCLILEDLGDLKQSFNPNDLKCSNFIRVYRNSSDF 180

Query: 181 GLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRP 240
           GLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRP
Sbjct: 181 GLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRP 240

Query: 241 GGKFLLSLLPVFVMII 253
           GGKFLLSLLPVFVMII
Sbjct: 241 GGKFLLSLLPVFVMII 253

[Close]

BLAST of Cp4.1LG20g07020 vs. ExPASy TrEMBL
Match: A0A1S3CG71 (uncharacterized protein LOC103500362 OS=Cucumis melo OX=3656 GN=LOC103500362 PE=4 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 1.39e-135
Identity = 201/267 (75.28%), Postives = 224/267 (83.90%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSS---KTDPISCGKIQIQSPFLSSSN-----PLSHMILC 60
           MQK  SFHLL S LF NF L SS   + DP SCGK Q+Q PFLSSSN     PL+HMILC
Sbjct: 1   MQKFLSFHLLQSFLFLNFCLGSSIPKENDPTSCGKFQLQPPFLSSSNLNGPFPLNHMILC 60

Query: 61  RSHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLL 120
           RS KLYFRTSIG+FPIS+IDYTTKTLIIS+  SSS  HFVSP+LLSSGLPSPP+LINSLL
Sbjct: 61  RSQKLYFRTSIGVFPISKIDYTTKTLIISNFLSSSH-HFVSPSLLSSGLPSPPHLINSLL 120

Query: 121 LFHCSNPTKPISQ---NCPKFEALQNQEQ---SQKPSCLILEDLGDLKQSFHPNDLKCSN 180
           LF+CSNPTKPI++   NCPK  ALQNQ++   SQK SCLI EDLG L++SFHPNDLKCS+
Sbjct: 121 LFNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLGKLQESFHPNDLKCSH 180

Query: 181 FIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKD 240
           F RVYRNSSD  L+NGYKLGTSISFDIPDHVPN C ECEK DGHCGVGLRC+CHV+ECKD
Sbjct: 181 FRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLECKD 240

Query: 241 KVFSEGGIVRPGGKFLLSLLPVFVMII 253
           KVFS+GGIVRPGGK L+SL+ VFV+II
Sbjct: 241 KVFSKGGIVRPGGKILISLMAVFVVII 266

[Close]

BLAST of Cp4.1LG20g07020 vs. ExPASy TrEMBL
Match: A0A6J1DHE8 (uncharacterized protein LOC111020512 OS=Momordica charantia OX=3673 GN=LOC111020512 PE=4 SV=1)

HSP 1 Score: 379 bits (973), Expect = 1.03e-130
Identity = 193/260 (74.23%), Postives = 210/260 (80.77%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFL-----CSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSH 60
           MQKIQ+FHLL S+L  NFFL      S KTDP SCGK QIQ PFLSS  PL+HMILCRS 
Sbjct: 1   MQKIQNFHLLQSLLPLNFFLFFGCSISQKTDPTSCGKFQIQPPFLSS--PLNHMILCRSQ 60

Query: 61  KLYFRTSIGLFPISQIDYTTKTLIISHVPSS---SSTHFVSPALLSSGLPSPPNLINSLL 120
           KLYFRTSIGLFPIS IDY+T+TLIIS  PSS   SSTHFVSP+LLSSGLPSPP+L NSLL
Sbjct: 61  KLYFRTSIGLFPISSIDYSTRTLIISQFPSSYSSSSTHFVSPSLLSSGLPSPPDLTNSLL 120

Query: 121 LFHCSNPTKPISQNCPKFEALQNQEQSQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYR 180
           LFHCSNPTKPIS++      L N   S K SCLIL+DL +L  SFHPND+ CS++ RVYR
Sbjct: 121 LFHCSNPTKPISESAKTCTHLPNFGASPKTSCLILDDLRNLNHSFHPNDMNCSHYTRVYR 180

Query: 181 NSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEG 240
           NSSDF LRNGYKLGT+ISFDIPDHVPN C EC K  GHCGVGLRC+CHV+ECKDKVFSEG
Sbjct: 181 NSSDFELRNGYKLGTTISFDIPDHVPNLCNECGKPGGHCGVGLRCICHVLECKDKVFSEG 240

Query: 241 GIVRPGGKFLLSLLPVFVMI 252
           GIV PGGKFLL LL V VMI
Sbjct: 241 GIVSPGGKFLLYLLAVLVMI 258

[Close]

BLAST of Cp4.1LG20g07020 vs. ExPASy TrEMBL
Match: A0A5A7TC69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00470 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 2.85e-85
Identity = 126/162 (77.78%), Postives = 142/162 (87.65%), Query Frame = 0


Query: 98  SSGLPSPPNLINSLLLFHCSNPTKPISQ---NCPKFEALQNQEQ---SQKPSCLILEDLG 157
           S GLPSPP+LINSLLLF+CSNPTKPI++   NCPK  ALQNQ++   SQK SCLI EDLG
Sbjct: 32  SCGLPSPPHLINSLLLFNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLG 91

Query: 158 DLKQSFHPNDLKCSNFIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHC 217
            L++SFHPNDLKCS+F RVYRNSSD  L+NGYKLGTSISFDIPDHVPN C ECEK DGHC
Sbjct: 92  KLQESFHPNDLKCSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHC 151

Query: 218 GVGLRCLCHVVECKDKVFSEGGIVRPGGKFLLSLLPVFVMII 253
           GVGLRC+CHV+ECKDKVFS+GGIVRPGGK L+SL+ VFV+II
Sbjct: 152 GVGLRCICHVLECKDKVFSKGGIVRPGGKILISLMAVFVVII 193

[Close]

BLAST of Cp4.1LG20g07020 vs. TAIR 10
Match: AT3G44716.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 13 Blast hits to 13 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-11
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 184 KLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGKFLL 243
           KL   +S ++  H+P+ C  CE+  G+CGV LRCLCH  ECK+KV + G   R     L 
Sbjct: 70  KLRARVSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKECKNKVINFGTKSRALSGNLQ 129

Query: 244 SLLPVFVMI 253
            LLP+ +++
Sbjct: 130 QLLPLLLLL 138

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BLAST of Cp4.1LG20g07020 vs. TAIR 10
Match: AT3G44716.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 2.7e-10
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 184 KLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEG 233
           KL   +S ++  H+P+ C  CE+  G+CGV LRCLCH  ECK+KV + G
Sbjct: 70  KLRARVSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKECKNKVINFG 118

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g07020 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g07020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519853.1	6.11e-188	100.00	uncharacterized protein LOC111783183 [Cucurbita pepo subsp. pepo]	[more]
XP_022970339.1	9.48e-178	96.46	uncharacterized protein LOC111469332 [Cucurbita maxima]	[more]
XP_022930045.1	1.00e-177	95.70	uncharacterized protein LOC111436512 [Cucurbita moschata]	[more]
KAG7029858.1	1.21e-177	95.70	hypothetical protein SDJN02_08201, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8652799.1	2.00e-142	78.28	hypothetical protein Csa_022847 [Cucumis sativus]	[more]

BLAST of Cp4.1LG20g07020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I584	4.59e-178	96.46	uncharacterized protein LOC111469332 OS=Cucurbita maxima OX=3661 GN=LOC111469332...	[more]
A0A6J1EVX8	4.86e-178	95.70	uncharacterized protein LOC111436512 OS=Cucurbita moschata OX=3662 GN=LOC1114365...	[more]
A0A1S3CG71	1.39e-135	75.28	uncharacterized protein LOC103500362 OS=Cucumis melo OX=3656 GN=LOC103500362 PE=...	[more]
A0A6J1DHE8	1.03e-130	74.23	uncharacterized protein LOC111020512 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5A7TC69	2.85e-85	77.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cp4.1LG20g07020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44716.1	2.5e-11	42.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G44716.2	2.7e-10	48.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33355:SF11	PROTEIN, PUTATIVE-RELATED	coord: 5..244
None	No IPR available	PANTHER	PTHR33355	WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED	coord: 5..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g07020.1	Cp4.1LG20g07020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane