Cp4.1LG20g06970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g06970
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	alpha/beta-Hydrolases superfamily protein
Location	Cp4.1LG20: 5409114 .. 5409848 (+)
RNA-Seq Expression	Cp4.1LG20g06970
Synteny	Cp4.1LG20g06970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTTAGTTGGATGGGTTTATCAAGCACTGAAACCGCCACCTCCAAAGATATGTGGATCACCAAATGGTCCTCTGCTGACTTCGCGTAGAGTCAAACTCAATGATGGAAGACATTTGGCCTACAGAGAATTCGGAGTTCCTAAGGAAAAGGCTCAATTCAAGATCATTCTTTCTCATGGCTATAATAACTCCCGACATATGCACTTAGCTGCTTCTCAAGTACGACATTGTTCTTCATCTTCTTCAACTTTCATTCTTTTTTAAAAAAATTGTATTCAATCTGTTTTAGGAACTTATGGAGAATCACAACGCGTGCATAATATTACATGACCGAGCTGGTTACGGAGAGAGTGATCCATATCTATCACGCTCGGCAAAGATTGAAGCACTTGACATGGAAGAATTAGCTGATAAATTGGAGCTTGGCAGCAAATTTTATATGTTCATTGGGAGCGTACCCGATTTGGAGCTATCTGAAATACATTTCACACAAGTATTTTAATTTGATGTTTTCAAAATAATCATGAATTATTGTTTTTGGGTGAGCTAATTGATTATATAATTTACAGACTCGTAGGAGCTTTCCTGATAGTTCCTTTCGTGAATTATTGGTGGCCTTCCATTCCACCGGCTTTAGCAAAACAGTCATTTAGGAAGCTTCCTCTATTATTTCAGTTCACCTTTGGAATTGTGCATTACACACCTTGGATATACTATTGGTGGACCAAGCAGAAA

mRNA sequence

GGTTTAGTTGGATGGGTTTATCAAGCACTGAAACCGCCACCTCCAAAGATATGTGGATCACCAAATGGTCCTCTGCTGACTTCGCGTAGAGTCAAACTCAATGATGGAAGACATTTGGCCTACAGAGAATTCGGAGTTCCTAAGGAAAAGGCTCAATTCAAGATCATTCTTTCTCATGGCTATAATAACTCCCGACATATGCACTTAGCTGCTTCTCAAACTCGTAGGAGCTTTCCTGATAGTTCCTTTCGTGAATTATTGGTGGCCTTCCATTCCACCGGCTTTAGCAAAACATTCACCTTTGGAATTGTGCATTACACACCTTGGATATACTATTGGTGGACCAAGCAGAAA

Coding sequence (CDS)

GGTTTAGTTGGATGGGTTTATCAAGCACTGAAACCGCCACCTCCAAAGATATGTGGATCACCAAATGGTCCTCTGCTGACTTCGCGTAGAGTCAAACTCAATGATGGAAGACATTTGGCCTACAGAGAATTCGGAGTTCCTAAGGAAAAGGCTCAATTCAAGATCATTCTTTCTCATGGCTATAATAACTCCCGACATATGCACTTAGCTGCTTCTCAAACTCGTAGGAGCTTTCCTGATAGTTCCTTTCGTGAATTATTGGTGGCCTTCCATTCCACCGGCTTTAGCAAAACATTCACCTTTGGAATTGTGCATTACACACCTTGGATATACTATTGGTGGACCAAGCAGAAA

Protein sequence

GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHGYNNSRHMHLAASQTRRSFPDSSFRELLVAFHSTGFSKTFTFGIVHYTPWIYYWWTKQK

Homology

[Close]

BLAST of Cp4.1LG20g06970 vs. NCBI nr
Match: KAG6573587.1 (hypothetical protein SDJN03_27474, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155 bits (391), Expect = 2.92e-46
Identity = 75/98 (76.53%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GL+GWVYQALKPPPPKICGS NGP LTS RVKL DGRHLAYRE GVPKE+AQ+KII+ H 
Sbjct: 12  GLLGWVYQALKPPPPKICGSANGPPLTSPRVKLRDGRHLAYREVGVPKEEAQYKIIICHS 71

Query: 61  YNNSRHMHLAASQTRRSFPDSSFRELLVAFHSTGFSKT 98
           YNNS+ MHL ASQT RSFP  SF ELLVAF S  F  T
Sbjct: 72  YNNSKDMHLPASQTLRSFPCGSFSELLVAFRSFSFITT 109

[Close]

BLAST of Cp4.1LG20g06970 vs. NCBI nr
Match: XP_023520281.1 (uncharacterized protein LOC111783591 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 161 bits (408), Expect = 4.50e-46
Identity = 96/199 (48.24%), Postives = 101/199 (50.75%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GLVGWVYQALKPPPPKICGSPNGP LTSRRVKLNDGRHLAYREFGVPKEKAQ+KIILSHG
Sbjct: 12  GLVGWVYQALKPPPPKICGSPNGPPLTSRRVKLNDGRHLAYREFGVPKEKAQYKIILSHG 71

Query: 61  YNNSRHMHLAASQTRRS-------------------FPDSSFR-------------ELLV 118
           YN+SRHMHLAASQ                       +P  S +             EL  
Sbjct: 72  YNDSRHMHLAASQELMEEFNACIILYDRAGYGESDPYPSRSAKTEAFDIEELADKLELGS 131

[Close]

BLAST of Cp4.1LG20g06970 vs. NCBI nr
Match: KAG6583650.1 (hypothetical protein SDJN03_19582, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161 bits (407), Expect = 6.35e-46
Identity = 97/199 (48.74%), Postives = 101/199 (50.75%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GLVGWVYQALKPPPPKICGSPNGP LTSRRVKLNDGRHLAYREFGVPKEKAQ+KIILSHG
Sbjct: 12  GLVGWVYQALKPPPPKICGSPNGPPLTSRRVKLNDGRHLAYREFGVPKEKAQYKIILSHG 71

Query: 61  YNNSRHMHLAASQT------------------------RRSFPDSSFR--------ELLV 118
           YN+SRHMHLAASQ                          RS    +F         EL  
Sbjct: 72  YNDSRHMHLAASQEFMEELNACIILYDRAGYGESDPYPSRSAKTEAFDIEELADKLELGS 131

[Close]

BLAST of Cp4.1LG20g06970 vs. NCBI nr
Match: XP_022932189.1 (uncharacterized protein LOC111438509 [Cucurbita moschata])

HSP 1 Score: 153 bits (387), Expect = 6.32e-45
Identity = 88/152 (57.89%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GLVG VYQALKPPPPKICGS NGP LT  RVKLNDGRHLA+REFGVPKEKAQ KIILSHG
Sbjct: 12  GLVGSVYQALKPPPPKICGSQNGPPLTLGRVKLNDGRHLAHREFGVPKEKAQHKIILSHG 71

Query: 61  YNNSRHMHLAASQ----------------------------------------------- 98
           YN+SRHMHLAASQ                                               
Sbjct: 72  YNDSRHMHLAASQELMEKHNACIILHDRAGYGESDPYPSRSTKIEALDIEELTDKLELGK 131

[Close]

BLAST of Cp4.1LG20g06970 vs. NCBI nr
Match: XP_022932192.1 (uncharacterized protein LOC111438511 [Cucurbita moschata])

HSP 1 Score: 157 bits (398), Expect = 1.41e-44
Identity = 95/199 (47.74%), Postives = 101/199 (50.75%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GLVGWVYQALKPPPPKICGSPNGP LTSRRVKLNDGRHLAYREFGVPKEKAQ+KIILSHG
Sbjct: 12  GLVGWVYQALKPPPPKICGSPNGPPLTSRRVKLNDGRHLAYREFGVPKEKAQYKIILSHG 71

Query: 61  YNNSRHMHLAASQ------------------------TRRSFPDSSFR--------ELLV 118
           YN+SR MHLAAS+                        + RS    +F         EL  
Sbjct: 72  YNDSRQMHLAASEELMEEINACIILYDRAGYGESDPYSSRSAKTEAFDIEELADKLELGS 131

[Close]

BLAST of Cp4.1LG20g06970 vs. ExPASy TrEMBL
Match: A0A6J1EWB6 (uncharacterized protein LOC111438509 OS=Cucurbita moschata OX=3662 GN=LOC111438509 PE=4 SV=1)

HSP 1 Score: 153 bits (387), Expect = 3.06e-45
Identity = 88/152 (57.89%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GLVG VYQALKPPPPKICGS NGP LT  RVKLNDGRHLA+REFGVPKEKAQ KIILSHG
Sbjct: 12  GLVGSVYQALKPPPPKICGSQNGPPLTLGRVKLNDGRHLAHREFGVPKEKAQHKIILSHG 71

Query: 61  YNNSRHMHLAASQ----------------------------------------------- 98
           YN+SRHMHLAASQ                                               
Sbjct: 72  YNDSRHMHLAASQELMEKHNACIILHDRAGYGESDPYPSRSTKIEALDIEELTDKLELGK 131

[Close]

BLAST of Cp4.1LG20g06970 vs. ExPASy TrEMBL
Match: A0A6J1EVY6 (uncharacterized protein LOC111438511 OS=Cucurbita moschata OX=3662 GN=LOC111438511 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 6.85e-45
Identity = 95/199 (47.74%), Postives = 101/199 (50.75%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GLVGWVYQALKPPPPKICGSPNGP LTSRRVKLNDGRHLAYREFGVPKEKAQ+KIILSHG
Sbjct: 12  GLVGWVYQALKPPPPKICGSPNGPPLTSRRVKLNDGRHLAYREFGVPKEKAQYKIILSHG 71

Query: 61  YNNSRHMHLAASQ------------------------TRRSFPDSSFR--------ELLV 118
           YN+SR MHLAAS+                        + RS    +F         EL  
Sbjct: 72  YNDSRQMHLAASEELMEEINACIILYDRAGYGESDPYSSRSAKTEAFDIEELADKLELGS 131

[Close]

BLAST of Cp4.1LG20g06970 vs. ExPASy TrEMBL
Match: A0A6J1F0Z1 (uncharacterized protein LOC111438508 OS=Cucurbita moschata OX=3662 GN=LOC111438508 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 2.72e-44
Identity = 95/199 (47.74%), Postives = 100/199 (50.25%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GLVGWVYQALKPPPPKICGSPNGP LTSRRVKLNDGRHLAYREFGVPKEKAQ KIILSHG
Sbjct: 12  GLVGWVYQALKPPPPKICGSPNGPPLTSRRVKLNDGRHLAYREFGVPKEKAQHKIILSHG 71

Query: 61  YNNSRHMHLAASQT------------------------RRSFPDSSFR--------ELLV 118
           Y +SRHM+LAASQ                          RS    +F         EL  
Sbjct: 72  YYDSRHMYLAASQELMEELNACIILYDRAGYGESDPYPSRSAQTEAFDIEELADKLELDS 131

[Close]

BLAST of Cp4.1LG20g06970 vs. ExPASy TrEMBL
Match: A0A6J1I3C9 (uncharacterized protein LOC111469259 OS=Cucurbita maxima OX=3661 GN=LOC111469259 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 2.99e-44
Identity = 94/199 (47.24%), Postives = 100/199 (50.25%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GLVGWVY+ALKPPPPKICGSPNGP LTSRRVKLNDGRHLAYREFGVPKEKAQ KIILSHG
Sbjct: 12  GLVGWVYRALKPPPPKICGSPNGPPLTSRRVKLNDGRHLAYREFGVPKEKAQHKIILSHG 71

Query: 61  YNNSRHMHLAASQTRRS-------------------FPDSSFR-------------ELLV 118
           YN+SRHM+LAASQ                       +P  S +             EL  
Sbjct: 72  YNDSRHMYLAASQELMEELNACIILYDRAGYGESDPYPSRSAKTEAFDIEELANKLELGS 131

[Close]

BLAST of Cp4.1LG20g06970 vs. ExPASy TrEMBL
Match: A0A6J1HYK6 (uncharacterized protein LOC111469256 OS=Cucurbita maxima OX=3661 GN=LOC111469256 PE=4 SV=1)

HSP 1 Score: 155 bits (393), Expect = 3.83e-44
Identity = 94/199 (47.24%), Postives = 99/199 (49.75%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           GLVGWVYQALKPPPPKICGSPNGP LTSRRVKLNDGRHLAYREFGVPKEKAQ KIILSHG
Sbjct: 12  GLVGWVYQALKPPPPKICGSPNGPPLTSRRVKLNDGRHLAYREFGVPKEKAQHKIILSHG 71

Query: 61  YNNSRHMHLAASQTRRS-------------------FPDSSFR-------------ELLV 118
           YN+SRHM+LA SQ                       +P  S +             EL  
Sbjct: 72  YNDSRHMYLAPSQELMEELNACMILYDRAGYGESDPYPSRSAKTEAFDIEELANKLELGS 131

[Close]

BLAST of Cp4.1LG20g06970 vs. TAIR 10
Match: AT5G22460.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20
Identity = 38/64 (59.38%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 2  LVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHGY 61
          L+G++Y++ KPPPP+ICG PNGP +TS R+KL+DGR+LAYRE GV ++ A +KII+ HG+
Sbjct: 13 LIGYIYRSFKPPPPRICGHPNGPPVTSPRIKLSDGRYLAYRESGVDRDNANYKIIVVHGF 72

Query: 62 NNSR 66
          N+S+
Sbjct: 73 NSSK 76

HSP 2 Score: 34.3 bits (77), Expect = 8.3e-02
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 0


Query: 99  FTFGIVHYTPWIYYWWTKQK 119
           +TF + HY PW+ YWW  QK
Sbjct: 191 WTFKVAHYVPWLLYWWLTQK 210

[Close]

BLAST of Cp4.1LG20g06970 vs. TAIR 10
Match: AT5G22460.2 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20
Identity = 38/64 (59.38%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 2  LVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHGY 61
          L+G++Y++ KPPPP+ICG PNGP +TS R+KL+DGR+LAYRE GV ++ A +KII+ HG+
Sbjct: 13 LIGYIYRSFKPPPPRICGHPNGPPVTSPRIKLSDGRYLAYRESGVDRDNANYKIIVVHGF 72

Query: 62 NNSR 66
          N+S+
Sbjct: 73 NSSK 76

HSP 2 Score: 34.3 bits (77), Expect = 8.3e-02
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 0


Query: 99  FTFGIVHYTPWIYYWWTKQK 119
           +TF + HY PW+ YWW  QK
Sbjct: 191 WTFKVAHYVPWLLYWWLTQK 210

[Close]

BLAST of Cp4.1LG20g06970 vs. TAIR 10
Match: AT3G48410.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-20
Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1   GLVGWVYQALKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 60
           G++ WVYQ ++PPP KI GSP GP +TS R+KL DGRHLAY EFG+P+++A+FKII  HG
Sbjct: 43  GVLAWVYQTIQPPPAKIVGSPGGPTVTSPRIKLRDGRHLAYTEFGIPRDEAKFKIINIHG 102

Query: 61  YNN-SRHMHLA 71
           +++  R  H A
Sbjct: 103 FDSCMRDSHFA 113

[Close]

BLAST of Cp4.1LG20g06970 vs. TAIR 10
Match: AT1G74300.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-18
Identity = 37/66 (56.06%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 2  LVGWVYQA-LKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 61
          ++   YQ+ LKPPPP +CGSP GP +T+ R+KL DGRHLAY+E+G+P+EKA+ KI+  HG
Sbjct: 15 ILALTYQSILKPPPPNLCGSPGGPPITAPRIKLRDGRHLAYKEYGLPREKAKHKIVFIHG 74

Query: 62 YNNSRH 67
           ++ RH
Sbjct: 75 SDSCRH 80

[Close]

BLAST of Cp4.1LG20g06970 vs. TAIR 10
Match: AT1G74280.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 9.1e-17
Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 2  LVGWVYQA-LKPPPPKICGSPNGPLLTSRRVKLNDGRHLAYREFGVPKEKAQFKIILSHG 61
          +V + YQ+ LKPPPPK+CGS  GP +T+ R+KL DGR+LAY+E G+P+EKA  KI+  HG
Sbjct: 32 IVAFTYQSKLKPPPPKLCGSSGGPPITAPRIKLQDGRYLAYKEHGLPREKANRKIVFIHG 91

Query: 62 YNNSRH 67
           +  RH
Sbjct: 92 SDCCRH 97

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g06970 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g06970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573587.1	2.92e-46	76.53	hypothetical protein SDJN03_27474, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023520281.1	4.50e-46	48.24	uncharacterized protein LOC111783591 [Cucurbita pepo subsp. pepo]	[more]
KAG6583650.1	6.35e-46	48.74	hypothetical protein SDJN03_19582, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022932189.1	6.32e-45	57.89	uncharacterized protein LOC111438509 [Cucurbita moschata]	[more]
XP_022932192.1	1.41e-44	47.74	uncharacterized protein LOC111438511 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG20g06970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWB6	3.06e-45	57.89	uncharacterized protein LOC111438509 OS=Cucurbita moschata OX=3662 GN=LOC1114385...	[more]
A0A6J1EVY6	6.85e-45	47.74	uncharacterized protein LOC111438511 OS=Cucurbita moschata OX=3662 GN=LOC1114385...	[more]
A0A6J1F0Z1	2.72e-44	47.74	uncharacterized protein LOC111438508 OS=Cucurbita moschata OX=3662 GN=LOC1114385...	[more]
A0A6J1I3C9	2.99e-44	47.24	uncharacterized protein LOC111469259 OS=Cucurbita maxima OX=3661 GN=LOC111469259...	[more]
A0A6J1HYK6	3.83e-44	47.24	uncharacterized protein LOC111469256 OS=Cucurbita maxima OX=3661 GN=LOC111469256...	[more]

BLAST of Cp4.1LG20g06970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22460.1	1.8e-20	59.38	alpha/beta-Hydrolases superfamily protein	[more]
AT5G22460.2	1.8e-20	59.38	alpha/beta-Hydrolases superfamily protein	[more]
AT3G48410.1	3.9e-20	57.75	alpha/beta-Hydrolases superfamily protein	[more]
AT1G74300.1	2.2e-18	56.06	alpha/beta-Hydrolases superfamily protein	[more]
AT1G74280.1	9.1e-17	56.06	alpha/beta-Hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45763:SF21	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	coord: 2..73 coord: 88..118
None	No IPR available	PANTHER	PTHR45763	HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED	coord: 2..73 coord: 88..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g06970.1	Cp4.1LG20g06970.1	mRNA