Cp4.1LG20g06550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g06550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	5'-AMP-activated protein kinase beta-2 subunit protein
Location	Cp4.1LG20: 4137886 .. 4140680 (-)
RNA-Seq Expression	Cp4.1LG20g06550
Synteny	Cp4.1LG20g06550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTCTAATCAGTCCCAACTTCAATGATGATCTTGCTTGAAGTGGAGGGCGATAAAATGGGCAAGAAAACAAGAACAATCTCACTTTCTTCTCCTTTTCTCTGCCTTAATTCTCGCTTTAGCACTCGTGTGGGGTGAACCCTGAAGCCTCAAGATTACAGCCATCTCCCCAGAAACGGAATACTCATTCAGTGATGGTGGAGTTGGTGTAGAGACCCCATCAATGGCCTCCTTCCTCCATTCAATCAATTCCAACGCCGCTCCATTTCATTGATCATGTGAGGACGACAATCCCCAATTTCTTCTCCCAACGCTGCTCCCTTGAGCCGCCTCTGATTCTTACCCAAGTCATCGGAGAATTTTGTTGAAGATAAGGGGGTTTAGCGATTCTCCTTCGATATCGATTTCTGGGGTTTCTTTTTGTCGTCTATGATTTTTGATTTCCCTTTCTCTAATCTGATTTTGAGGCTCTGGAAGTGGGTTTTGTGTTTTGTTTTCTTGTTCTTAGTTCTTTAAGGGTTTTGGGTTGTATTTGTACTGATTAATCAATGGGTAACGTGAATGGGAGAGAGTATGTAGACGAAGAAGATGATGATGAAAATGAAGAAGAAGTAGAAGAAGAGGGTTTAATTGTGCATGAGGGCGTCGCCGTGGCTGATGGGGCTCATATTCTATACCGCCCGCAAGGTGTTTGTCAAAAGTTGTTGGGCGGCCAGTCCCCTCCACAAAGCCCCACGGCCACTCGATCGCCATTGATTTTCACTCCTCAAGTAAGCCCTCTCTCTCTCTTTATCTTGAGAAGTTCCTTTTAGTTTCTTGTAGCTAATTGCCTATGCTTACTAGCAATGTGATGAATTTGAATTAATGTATTACTTGGATTTTGAATTTCATTTGGAGATTGATATTACCTCTTGTAGATATAACTTGTATGACAATGGATAAATGTTAGTTTTGATCTTCAAGTTTGATACAGAGATTTGTTGTTGGCTGAAAAGAAGTGGGAGAAGTTTGAGATTATGAGGGTTAATGTCGAGGATGGTTGGGAGAGAGTTCTACCTCGACTAATTAAGGGGTTGATCATGGGTTTATAAGTAAGGAAACACTATCTCCATTGGTACGAGACCTTTTGGGAAATCAAAATCAAAACCATGAGAGCTTATAGTCAAAGTGGACAATATCGTACCATTGTGGAGGGAGTCCCACGTTGGCTAATTAAGGGGTTGATCATGGGTTTATAAGTAAGGAACACTATCTCTATTGGTATGAGGCCTTTTGGGAAATCAAAAGCAAAACCATGAGAGCTTATGTTCCAAGCGGACAATATCGTACCATTATGGAGGTTTGTGATTTCTAACCGTTAGTTGAAGACTTCGCCTACTTTTTTTTTTTATTCGAGAAGTTGGTTTAAGGCAGTTGCTTTAGCTTAAACTTTATATAATGGGGTTCATTCATTTTTTTCCCCTTCAATATATATACATTGGGTGTATCTAGCTGCTGGTTCAGCTTAGAGCTGACAAGAAAATGTTCAATTTCAAAGAGATATAAAGTTACTTCAAACTTGTAAAACTTTAACAAATTCATGTTACTCTCAGTTGGATAGGTTGTTTACTATCATCTTTTATTAGTTCCTTGATGTTTCTTTTACATTTTTATCCTCAGGTTCCGCTCACTCCTCTACGAAAACCAGATGAGATGCTCGTAATTAGCCAATCCCAAATGATGCAAGGTTCCTTGGGTTATGAAGAAACGTGCGAACAAAGCATTCCAACCATGATTACATGGACTTATGGAGGAAAGGAAGTAGCTATTGAGGGATCATGGGATCTATGGAGAACAAGGTTTTCTTCTCTTTTTGTACCATTCCACGATTATCGTTTCTGAACTGCTGCCCGAAATATCTGATACTAGTTGTACCTCATTAACCAGAACGCCCTTGCAGAGATCAGGGAGAGACTTCACTATAATGAAAGTGCTTCCTGCTGGGGTTTATCAATATAGGTTTCTCGTGGACGGACAATGGAGGTATTCGCCGGAGTTGCCTTGGGGCCAAGATGATGTTGGCAACGCGTACAATGTTTTGGACTTGCAGGTAACTGATAACGTAGGATATGCAAGGAAAAGGGTAGAGTTAATTGACTTGGAGATGAACTCGTGTTGTCTCGTAAACAACCATTAATATTTTAGGCTACTTCAATGCTTTTTCCCTATGAGACCCGAAACTTGGTTTGTCTAACTAACAATCAATAGTCCATCGACATAGACAATCTATCGTTGTATGTCAATTGCTTTTTTTCCTTTTATATTCCGCTTGTTCTTCATTATTGGTGTTGGTGTTACTATTCTCTGTTAGAAATCACGACTCTCCATAATGGTATGATATGGTCCACTTTGAACATAAGCTCTCATGGTTTTTCTATTGGTTTCCCCACGGCCCTCGATAGACCTTACATCATTAGTTCATCAATTATGCAGGACAACGTGCCCGAAGATATCGAAAGCATCTCTAGCTTCGAGCCTCCTCAGTCACCAGACTCGAGCTATGACAATTTACTACTCGGGTCTGATGACTACGCAAAAGAACCGCCATTGGTTCCCCCACACCTACAGAAGACACTGCTCGATTCGCCATCATCATACATGGAGATTCCACCCTGTCTGTCAAGGCCACAACATGTAGTATTGAATCATCTTTACATGCAGAGAGGGAAGAGCGGTCCATCGATTGTTGCACTCGGTACGACACATCGGTTTCTAACCAAGTATGTAACTGTTGTGCTCTACAAGTCTTTCCAA

mRNA sequence

TTTTTTTCTAATCAGTCCCAACTTCAATGATGATCTTGCTTGAAGTGGAGGGCGATAAAATGGGCAAGAAAACAAGAACAATCTCACTTTCTTCTCCTTTTCTCTGCCTTAATTCTCGCTTTAGCACTCGTGTGGGGTGAACCCTGAAGCCTCAAGATTACAGCCATCTCCCCAGAAACGGAATACTCATTCAGTGATGGTGGAGTTGGTGTAGAGACCCCATCAATGGCCTCCTTCCTCCATTCAATCAATTCCAACGCCGCTCCATTTCATTGATCATGTGAGGACGACAATCCCCAATTTCTTCTCCCAACGCTGCTCCCTTGAGCCGCCTCTGATTCTTACCCAAGTCATCGGAGAATTTTGTTGAAGATAAGGGGGTTTAGCGATTCTCCTTCGATATCGATTTCTGGGGTTTCTTTTTGTCGTCTATGATTTTTGATTTCCCTTTCTCTAATCTGATTTTGAGGCTCTGGAAGTGGGTTTTGTGTTTTGTTTTCTTGTTCTTAGTTCTTTAAGGGTTTTGGGTTGTATTTGTACTGATTAATCAATGGGTAACGTGAATGGGAGAGAGTATGTAGACGAAGAAGATGATGATGAAAATGAAGAAGAAGTAGAAGAAGAGGGTTTAATTGTGCATGAGGGCGTCGCCGTGGCTGATGGGGCTCATATTCTATACCGCCCGCAAGGTGTTTGTCAAAAGTTGTTGGGCGGCCAGTCCCCTCCACAAAGCCCCACGGCCACTCGATCGCCATTGATTTTCACTCCTCAAGTTCCGCTCACTCCTCTACGAAAACCAGATGAGATGCTCGTAATTAGCCAATCCCAAATGATGCAAGGTTCCTTGGGTTATGAAGAAACGTGCGAACAAAGCATTCCAACCATGATTACATGGACTTATGGAGGAAAGGAAGTAGCTATTGAGGGATCATGGGATCTATGGAGAACAAGAACGCCCTTGCAGAGATCAGGGAGAGACTTCACTATAATGAAAGTGCTTCCTGCTGGGGTTTATCAATATAGGTTTCTCGTGGACGGACAATGGAGGTATTCGCCGGAGTTGCCTTGGGGCCAAGATGATGTTGGCAACGCGTACAATGTTTTGGACTTGCAGAGAGGGAAGAGCGGTCCATCGATTGTTGCACTCGGTACGACACATCGGTTTCTAACCAAGTATGTAACTGTTGTGCTCTACAAGTCTTTCCAA

Coding sequence (CDS)

ATGGGTAACGTGAATGGGAGAGAGTATGTAGACGAAGAAGATGATGATGAAAATGAAGAAGAAGTAGAAGAAGAGGGTTTAATTGTGCATGAGGGCGTCGCCGTGGCTGATGGGGCTCATATTCTATACCGCCCGCAAGGTGTTTGTCAAAAGTTGTTGGGCGGCCAGTCCCCTCCACAAAGCCCCACGGCCACTCGATCGCCATTGATTTTCACTCCTCAAGTTCCGCTCACTCCTCTACGAAAACCAGATGAGATGCTCGTAATTAGCCAATCCCAAATGATGCAAGGTTCCTTGGGTTATGAAGAAACGTGCGAACAAAGCATTCCAACCATGATTACATGGACTTATGGAGGAAAGGAAGTAGCTATTGAGGGATCATGGGATCTATGGAGAACAAGAACGCCCTTGCAGAGATCAGGGAGAGACTTCACTATAATGAAAGTGCTTCCTGCTGGGGTTTATCAATATAGGTTTCTCGTGGACGGACAATGGAGGTATTCGCCGGAGTTGCCTTGGGGCCAAGATGATGTTGGCAACGCGTACAATGTTTTGGACTTGCAGAGAGGGAAGAGCGGTCCATCGATTGTTGCACTCGGTACGACACATCGGTTTCTAACCAAGTATGTAACTGTTGTGCTCTACAAGTCTTTCCAA

Protein sequence

MGNVNGREYVDEEDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGNAYNVLDLQRGKSGPSIVALGTTHRFLTKYVTVVLYKSFQ

Homology

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BLAST of Cp4.1LG20g06550 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.3e-57
Identity = 132/300 (44.00%), Postives = 163/300 (54.33%), Query Frame = 0


Query: 1   MGNVNGREYVDEED----DDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQ 60
           MGNVN RE  +  +    +DE+ E    E +      A +DG H       V    L GQ
Sbjct: 1   MGNVNAREEANSNNASAVEDEDAEICSREAM-----SAASDGNH-------VAPPELMGQ 60

Query: 61  SPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETC-EQSIPTMITW 120
           SPP SP AT+SPL+F PQVP+ PL++PDE+ + + S M   S  YEE   EQ IPTMITW
Sbjct: 61  SPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQGIPTMITW 120

Query: 121 TYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQ 180
            +GGKE+A+EGSWD W+TR+ LQRSG+DFTIMKVLP+GVY+YRF+VDGQWR++PELP  +
Sbjct: 121 CHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLAR 180

Query: 181 DDVGNAYNVLDL------------------------------------------------ 220
           DD GN +N+LDL                                                
Sbjct: 181 DDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMT 240

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BLAST of Cp4.1LG20g06550 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.6e-33
Identity = 83/236 (35.17%), Postives = 117/236 (49.58%), Query Frame = 0


Query: 57  SPPQSPTATRSPLIFTPQVPLTPLRK----PDEMLVISQSQMMQGSLGYEETCEQSIPTM 116
           SPP SP  + SP +F PQVP+ PL++    P   +  +QSQ +     ++   EQ IPT+
Sbjct: 49  SPPGSPARSPSPFLFAPQVPVAPLQRANAPPPNNIQWNQSQRV-----FDNPPEQGIPTI 108

Query: 117 ITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELP 176
           ITW  GG +VA+EGSWD WR+R  LQ+SG+D +I+ VLP+G+Y Y+ +VDG+ +Y P+LP
Sbjct: 109 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 168

Query: 177 WGQDDVGNAYNVLD---------------------------------------------- 217
           +  D+VGN  N+LD                                              
Sbjct: 169 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 228

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BLAST of Cp4.1LG20g06550 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.0e-15
Identity = 46/140 (32.86%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 54  GGQSPPQSPT----ATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSI 113
           GG +P +       +T  P +F+    L   + P +   +S  Q ++ S+   +  +Q+ 
Sbjct: 25  GGHAPGKEHKIMVGSTDDPSVFS----LPDSKLPGDKEFVSWQQDLEDSV---KPTQQAR 84

Query: 114 PTMITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSP 173
           PT+I W+ GGKEV I GS++ W T+ PL +S  DF  +  LP G +QY+F VDGQW + P
Sbjct: 85  PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDP 144

Query: 174 ELPWGQDDVGNAYNVLDLQR 190
             P     +G   N++ +++
Sbjct: 145 SEPVVTSQLGTINNLIHVKK 157

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BLAST of Cp4.1LG20g06550 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.0e-15
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 106 EQSIPTMITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQW 165
           +Q+ PT+I W+ GGKEV I GS++ W T+ PL +S  DF  +  LP G +QY+F VDGQW
Sbjct: 73  QQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQW 132

Query: 166 RYSPELPWGQDDVGNAYNVLDLQR 190
            + P  P     +G   N++ +++
Sbjct: 133 VHDPSEPVVTSQLGTINNLIHVKK 156

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BLAST of Cp4.1LG20g06550 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 42/126 (33.33%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 64  ATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGGKEVA 123
           +T  P +F+    L   + P +   +   Q +  S+   +  +Q+ PT+I W+ GGKEV 
Sbjct: 38  STDDPSVFS----LPDSKLPGDKEFVPWQQDLDDSV---KPAQQARPTVIRWSEGGKEVF 97

Query: 124 IEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGNAYN 183
           I GS++ W T+ PL +S  DF  +  LP G +QY+F VDGQW + P  P     +G   N
Sbjct: 98  ISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPVVTSQLGTINN 156

Query: 184 VLDLQR 190
           ++ +++
Sbjct: 158 LIHVKK 156

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BLAST of Cp4.1LG20g06550 vs. NCBI nr
Match: XP_023520032.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412 bits (1060), Expect = 1.15e-143
Identity = 219/295 (74.24%), Postives = 219/295 (74.24%), Query Frame = 0


Query: 1   MGNVNGREYVDEEDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPPQ 60
           MGNVNGREYVDEEDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPPQ
Sbjct: 1   MGNVNGREYVDEEDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPPQ 60

Query: 61  SPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGGK 120
           SPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGGK
Sbjct: 61  SPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGGK 120

Query: 121 EVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGN 180
           EVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGN
Sbjct: 121 EVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGN 180

Query: 181 AYNVLDLQ---------------------------------------------------- 219
           AYNVLDLQ                                                    
Sbjct: 181 AYNVLDLQDNVPEDIESISSFEPPQSPDSSYDNLLLGSDDYAKEPPLVPPHLQKTLLDSP 240

[Close]

BLAST of Cp4.1LG20g06550 vs. NCBI nr
Match: XP_022927294.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >KAG6583747.1 SNF1-related protein kinase regulatory subunit beta-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019388.1 SNF1-related protein kinase regulatory subunit beta-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 406 bits (1044), Expect = 3.25e-141
Identity = 218/296 (73.65%), Postives = 219/296 (73.99%), Query Frame = 0


Query: 1   MGNVNGREYVDEEDDD-ENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPP 60
           MGNVNGREYVDEEDDD ENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPP
Sbjct: 1   MGNVNGREYVDEEDDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPP 60

Query: 61  QSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGG 120
           QSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITW+YGG
Sbjct: 61  QSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWSYGG 120

Query: 121 KEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVG 180
           KEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVG
Sbjct: 121 KEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVG 180

Query: 181 NAYNVLDLQ--------------------------------------------------- 219
           NAYNVLDLQ                                                   
Sbjct: 181 NAYNVLDLQDNVPEDIESISSFEPPQSPDSSYDNLLLGSDDYAKEPPLVPPHLQKTLLDS 240

[Close]

BLAST of Cp4.1LG20g06550 vs. NCBI nr
Match: XP_023001594.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima])

HSP 1 Score: 397 bits (1021), Expect = 9.61e-138
Identity = 213/295 (72.20%), Postives = 217/295 (73.56%), Query Frame = 0


Query: 1   MGNVNGREYVDEEDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPPQ 60
           MGNVNGREYVDEEDDDENEE VEEEGLIV+EGVAVADGAHILYRPQGVCQKL+GGQSPPQ
Sbjct: 1   MGNVNGREYVDEEDDDENEE-VEEEGLIVNEGVAVADGAHILYRPQGVCQKLMGGQSPPQ 60

Query: 61  SPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGGK 120
           SPTA RSPLIFTPQVPLTPLRKP+EMLVISQSQMMQGSLGYEETCEQSIPTMITW+YGGK
Sbjct: 61  SPTAPRSPLIFTPQVPLTPLRKPEEMLVISQSQMMQGSLGYEETCEQSIPTMITWSYGGK 120

Query: 121 EVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGN 180
           EVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGN
Sbjct: 121 EVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGN 180

Query: 181 AYNVLDLQ---------------------------------------------------- 219
           AYNVLDLQ                                                    
Sbjct: 181 AYNVLDLQDNVPEDIKSISCFEPPQSPDSSYDNLLLGSDDYAKEPPLVPPHLQKTLLDSP 240

[Close]

BLAST of Cp4.1LG20g06550 vs. NCBI nr
Match: XP_038895464.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Benincasa hispida])

HSP 1 Score: 333 bits (853), Expect = 4.77e-112
Identity = 187/304 (61.51%), Postives = 200/304 (65.79%), Query Frame = 0


Query: 1   MGNVNGREYVDEE-----DDDENEEEV---EEEGLIVHEGVAVADGAHILYRPQGVCQKL 60
           MGNVNGREYVDE      ++DENEEEV   +E+ LIVHEGVA+AD AHI   PQGVC KL
Sbjct: 1   MGNVNGREYVDESPSGSVEEDENEEEVVEEQEDALIVHEGVAMADEAHIQCHPQGVCSKL 60

Query: 61  LGGQSPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETC-EQSIPT 120
           +GGQSPP SPTA RSPLIFTPQVPLTPLRK DEML++S S M Q SLGYEETC EQSI T
Sbjct: 61  MGGQSPPHSPTAPRSPLIFTPQVPLTPLRKADEMLILSHSPM-QSSLGYEETCNEQSIAT 120

Query: 121 MITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPEL 180
           MITW+YGGKEVAIEGSWD WRTR PLQRSG+DFT+MKVLPAGVYQYRFLVDGQWRY+PEL
Sbjct: 121 MITWSYGGKEVAIEGSWDRWRTRMPLQRSGKDFTLMKVLPAGVYQYRFLVDGQWRYAPEL 180

Query: 181 PWGQDDVGNAYNVLDLQ------------------------------------------- 219
           PW QDDVGNAYNVLDLQ                                           
Sbjct: 181 PWAQDDVGNAYNVLDLQDNVPEDIESISSFEPPQSPDSSYDNLLLGSNEYAKEPPLVPPH 240

[Close]

BLAST of Cp4.1LG20g06550 vs. NCBI nr
Match: XP_008463594.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 isoform X2 [Cucumis melo])

HSP 1 Score: 329 bits (843), Expect = 1.58e-110
Identity = 186/304 (61.18%), Postives = 200/304 (65.79%), Query Frame = 0


Query: 1   MGNVNGREYVDE------EDDDENEEEVEEE--GLIVHEGVAVADGAHILYRPQGVCQKL 60
           MGNVNGREYVDE      E++DENEEEVEEE  GLIVHEGV +ADGA IL    GVC KL
Sbjct: 1   MGNVNGREYVDESPSGSVEENDENEEEVEEEEDGLIVHEGVPMADGAPILCHSLGVCSKL 60

Query: 61  LGGQSPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETC-EQSIPT 120
           + GQSPPQSPTATRSPLIFTPQVPLTPLRK DEML+ + SQM Q SLG+E+TC EQSIPT
Sbjct: 61  MRGQSPPQSPTATRSPLIFTPQVPLTPLRKADEMLIHAHSQM-QSSLGFEDTCNEQSIPT 120

Query: 121 MITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPEL 180
           MITW+YGGKEVAIEGSWD WRTR PLQRSG+DFT+MKVLPAGVYQYRF VDGQWRY+PEL
Sbjct: 121 MITWSYGGKEVAIEGSWDHWRTRMPLQRSGKDFTLMKVLPAGVYQYRFFVDGQWRYAPEL 180

Query: 181 PWGQDDVGNAYNVLDLQ------------------------------------------- 219
           PW QDD GNAYNVLDLQ                                           
Sbjct: 181 PWAQDDSGNAYNVLDLQDNVPEDIESISSFEPPQSPDSSYDNLLLGSDDYAKEPPLVPPH 240

[Close]

BLAST of Cp4.1LG20g06550 vs. ExPASy TrEMBL
Match: A0A6J1EHM4 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata OX=3662 GN=LOC111434171 PE=3 SV=1)

HSP 1 Score: 406 bits (1044), Expect = 1.57e-141
Identity = 218/296 (73.65%), Postives = 219/296 (73.99%), Query Frame = 0


Query: 1   MGNVNGREYVDEEDDD-ENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPP 60
           MGNVNGREYVDEEDDD ENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPP
Sbjct: 1   MGNVNGREYVDEEDDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPP 60

Query: 61  QSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGG 120
           QSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITW+YGG
Sbjct: 61  QSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWSYGG 120

Query: 121 KEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVG 180
           KEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVG
Sbjct: 121 KEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVG 180

Query: 181 NAYNVLDLQ--------------------------------------------------- 219
           NAYNVLDLQ                                                   
Sbjct: 181 NAYNVLDLQDNVPEDIESISSFEPPQSPDSSYDNLLLGSDDYAKEPPLVPPHLQKTLLDS 240

[Close]

BLAST of Cp4.1LG20g06550 vs. ExPASy TrEMBL
Match: A0A6J1KN65 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima OX=3661 GN=LOC111495675 PE=3 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 4.66e-138
Identity = 213/295 (72.20%), Postives = 217/295 (73.56%), Query Frame = 0


Query: 1   MGNVNGREYVDEEDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGGQSPPQ 60
           MGNVNGREYVDEEDDDENEE VEEEGLIV+EGVAVADGAHILYRPQGVCQKL+GGQSPPQ
Sbjct: 1   MGNVNGREYVDEEDDDENEE-VEEEGLIVNEGVAVADGAHILYRPQGVCQKLMGGQSPPQ 60

Query: 61  SPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGGK 120
           SPTA RSPLIFTPQVPLTPLRKP+EMLVISQSQMMQGSLGYEETCEQSIPTMITW+YGGK
Sbjct: 61  SPTAPRSPLIFTPQVPLTPLRKPEEMLVISQSQMMQGSLGYEETCEQSIPTMITWSYGGK 120

Query: 121 EVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGN 180
           EVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGN
Sbjct: 121 EVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGN 180

Query: 181 AYNVLDLQ---------------------------------------------------- 219
           AYNVLDLQ                                                    
Sbjct: 181 AYNVLDLQDNVPEDIKSISCFEPPQSPDSSYDNLLLGSDDYAKEPPLVPPHLQKTLLDSP 240

[Close]

BLAST of Cp4.1LG20g06550 vs. ExPASy TrEMBL
Match: A0A1S3CJK5 (SNF1-related protein kinase regulatory subunit beta-2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501706 PE=3 SV=1)

HSP 1 Score: 329 bits (843), Expect = 7.64e-111
Identity = 186/304 (61.18%), Postives = 200/304 (65.79%), Query Frame = 0


Query: 1   MGNVNGREYVDE------EDDDENEEEVEEE--GLIVHEGVAVADGAHILYRPQGVCQKL 60
           MGNVNGREYVDE      E++DENEEEVEEE  GLIVHEGV +ADGA IL    GVC KL
Sbjct: 1   MGNVNGREYVDESPSGSVEENDENEEEVEEEEDGLIVHEGVPMADGAPILCHSLGVCSKL 60

Query: 61  LGGQSPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETC-EQSIPT 120
           + GQSPPQSPTATRSPLIFTPQVPLTPLRK DEML+ + SQM Q SLG+E+TC EQSIPT
Sbjct: 61  MRGQSPPQSPTATRSPLIFTPQVPLTPLRKADEMLIHAHSQM-QSSLGFEDTCNEQSIPT 120

Query: 121 MITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPEL 180
           MITW+YGGKEVAIEGSWD WRTR PLQRSG+DFT+MKVLPAGVYQYRF VDGQWRY+PEL
Sbjct: 121 MITWSYGGKEVAIEGSWDHWRTRMPLQRSGKDFTLMKVLPAGVYQYRFFVDGQWRYAPEL 180

Query: 181 PWGQDDVGNAYNVLDLQ------------------------------------------- 219
           PW QDD GNAYNVLDLQ                                           
Sbjct: 181 PWAQDDSGNAYNVLDLQDNVPEDIESISSFEPPQSPDSSYDNLLLGSDDYAKEPPLVPPH 240

[Close]

BLAST of Cp4.1LG20g06550 vs. ExPASy TrEMBL
Match: A0A6J1CLZ4 (SNF1-related protein kinase regulatory subunit beta-2 OS=Momordica charantia OX=3673 GN=LOC111012688 PE=3 SV=1)

HSP 1 Score: 325 bits (834), Expect = 1.61e-109
Identity = 179/301 (59.47%), Postives = 196/301 (65.12%), Query Frame = 0


Query: 1   MGNVNGREYVDE-----EDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQKLLGG 60
           MGNVNGREY D+     E+++E E EV E+G+IVHEGVAVADGAHI Y PQGVC KL+ G
Sbjct: 1   MGNVNGREYEDDTPSGSEEEEEVEGEVGEDGVIVHEGVAVADGAHIGYHPQGVCSKLVSG 60

Query: 61  QSPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETC-EQSIPTMIT 120
           QSPP SP ATRSPLIFTPQVPLTPLRKPDEML+ S  +M   S GYE TC E S+PTMIT
Sbjct: 61  QSPPHSPAATRSPLIFTPQVPLTPLRKPDEMLIPSDYRM-PNSFGYEGTCNEPSVPTMIT 120

Query: 121 WTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWG 180
           W+YGGKEVA+EGSWDLW+TR PLQRSG+DFTIMKVLPAGVYQYRFL+DGQWRY+PELPW 
Sbjct: 121 WSYGGKEVAVEGSWDLWKTRMPLQRSGKDFTIMKVLPAGVYQYRFLIDGQWRYAPELPWA 180

Query: 181 QDDVGNAYNVLDLQ---------------------------------------------- 219
           QD+ GNAYNVLDLQ                                              
Sbjct: 181 QDNAGNAYNVLDLQDNVPEDIESISSFEPPQSPDSSYNNVLLGSDDYAKEPPLVPPHLQR 240

[Close]

BLAST of Cp4.1LG20g06550 vs. ExPASy TrEMBL
Match: A0A0A0LYK2 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181340 PE=3 SV=1)

HSP 1 Score: 321 bits (823), Expect = 8.95e-108
Identity = 180/306 (58.82%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 1   MGNVNGREYVDE----------EDDDENEEEVEEEGLIVHEGVAVADGAHILYRPQGVCQ 60
           MGNVNGREYVDE          E+++E EEE EE+ LIVHEGV + DGA IL   QGVC 
Sbjct: 1   MGNVNGREYVDESPSGSVEENEEEEEEIEEEEEEDELIVHEGVPMPDGAPILCHSQGVCS 60

Query: 61  KLLGGQSPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQMMQGSLGYEETC-EQSI 120
           KL+ GQSPPQSPT TRSPLIFTPQVPLTPLRK DEML+ + SQM Q SL YE+TC EQSI
Sbjct: 61  KLMRGQSPPQSPTTTRSPLIFTPQVPLTPLRKADEMLIHTHSQM-QSSLAYEDTCNEQSI 120

Query: 121 PTMITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSP 180
           PTMITW+YGGKEV IEGSWD WRTR PLQRSG+DFT+MKVLPAGVYQYRFLVDGQWRY+P
Sbjct: 121 PTMITWSYGGKEVTIEGSWDCWRTRMPLQRSGKDFTLMKVLPAGVYQYRFLVDGQWRYAP 180

Query: 181 ELPWGQDDVGNAYNVLDLQ----------------------------------------- 219
           ELPW QDD GNAYNVLDLQ                                         
Sbjct: 181 ELPWAQDDAGNAYNVLDLQDNVPEDIESISSFEPPQSPDSSYDNLLLGSDDYAKEPPLVP 240

[Close]

BLAST of Cp4.1LG20g06550 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 218.4 bits (555), Expect = 5.7e-57
Identity = 121/263 (46.01%), Postives = 147/263 (55.89%), Query Frame = 0


Query: 34  AVADGAHILYRPQGVCQKLLGGQSPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQ 93
           A +DG H       V    L GQSPP SP AT+SPL+F PQVP+ PL++PDE+ + + S 
Sbjct: 3   AASDGNH-------VAPPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSW 62

Query: 94  MMQGSLGYEETC-EQSIPTMITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPA 153
           M   S  YEE   EQ IPTMITW +GGKE+A+EGSWD W+TR+ LQRSG+DFTIMKVLP+
Sbjct: 63  MQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPS 122

Query: 154 GVYQYRFLVDGQWRYSPELPWGQDDVGNAYNVLDL------------------------- 213
           GVY+YRF+VDGQWR++PELP  +DD GN +N+LDL                         
Sbjct: 123 GVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYS 182

Query: 214 ---------------------------------------------------QRGKSGPSI 220
                                                              Q+GKSGPS+
Sbjct: 183 NLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSV 242

[Close]

BLAST of Cp4.1LG20g06550 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 218.4 bits (555), Expect = 5.7e-57
Identity = 121/263 (46.01%), Postives = 147/263 (55.89%), Query Frame = 0


Query: 34  AVADGAHILYRPQGVCQKLLGGQSPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQ 93
           A +DG H       V    L GQSPP SP AT+SPL+F PQVP+ PL++PDE+ + + S 
Sbjct: 5   AASDGNH-------VAPPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSW 64

Query: 94  MMQGSLGYEETC-EQSIPTMITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPA 153
           M   S  YEE   EQ IPTMITW +GGKE+A+EGSWD W+TR+ LQRSG+DFTIMKVLP+
Sbjct: 65  MQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPS 124

Query: 154 GVYQYRFLVDGQWRYSPELPWGQDDVGNAYNVLDL------------------------- 213
           GVY+YRF+VDGQWR++PELP  +DD GN +N+LDL                         
Sbjct: 125 GVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYS 184

Query: 214 ---------------------------------------------------QRGKSGPSI 220
                                                              Q+GKSGPS+
Sbjct: 185 NLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSV 244

[Close]

BLAST of Cp4.1LG20g06550 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 211.8 bits (538), Expect = 5.4e-55
Identity = 120/263 (45.63%), Postives = 146/263 (55.51%), Query Frame = 0


Query: 34  AVADGAHILYRPQGVCQKLLGGQSPPQSPTATRSPLIFTPQVPLTPLRKPDEMLVISQSQ 93
           A +DG H       V    L GQSPP SP AT+SPL+F PQVP+ PL++PDE+ + + S 
Sbjct: 3   AASDGNH-------VAPPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSW 62

Query: 94  MMQGSLGYEETC-EQSIPTMITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPA 153
           M   S  YEE   EQ IPTMITW +GGKE+A+EGSWD W+T + LQRSG+DFTIMKVLP+
Sbjct: 63  MQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKT-SRLQRSGKDFTIMKVLPS 122

Query: 154 GVYQYRFLVDGQWRYSPELPWGQDDVGNAYNVLDL------------------------- 213
           GVY+YRF+VDGQWR++PELP  +DD GN +N+LDL                         
Sbjct: 123 GVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYS 182

Query: 214 ---------------------------------------------------QRGKSGPSI 220
                                                              Q+GKSGPS+
Sbjct: 183 NLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSV 242

[Close]

BLAST of Cp4.1LG20g06550 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-34
Identity = 83/236 (35.17%), Postives = 117/236 (49.58%), Query Frame = 0


Query: 57  SPPQSPTATRSPLIFTPQVPLTPLRK----PDEMLVISQSQMMQGSLGYEETCEQSIPTM 116
           SPP SP  + SP +F PQVP+ PL++    P   +  +QSQ +     ++   EQ IPT+
Sbjct: 49  SPPGSPARSPSPFLFAPQVPVAPLQRANAPPPNNIQWNQSQRV-----FDNPPEQGIPTI 108

Query: 117 ITWTYGGKEVAIEGSWDLWRTRTPLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELP 176
           ITW  GG +VA+EGSWD WR+R  LQ+SG+D +I+ VLP+G+Y Y+ +VDG+ +Y P+LP
Sbjct: 109 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 168

Query: 177 WGQDDVGNAYNVLD---------------------------------------------- 217
           +  D+VGN  N+LD                                              
Sbjct: 169 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 228

[Close]

BLAST of Cp4.1LG20g06550 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-28
Identity = 83/273 (30.40%), Postives = 117/273 (42.86%), Query Frame = 0


Query: 57  SPPQSPTATRSPLIFTPQ-------------------------------------VPLTP 116
           SPP SP  + SP +F PQ                                     VP+ P
Sbjct: 49  SPPGSPARSPSPFLFAPQPTLLFHVTSYNICSPMRHLFHCLGLTCVPNGCISCRMVPVAP 108

Query: 117 LRK----PDEMLVISQSQMMQGSLGYEETCEQSIPTMITWTYGGKEVAIEGSWDLWRTRT 176
           L++    P   +  +QSQ +     ++   EQ IPT+ITW  GG +VA+EGSWD WR+R 
Sbjct: 109 LQRANAPPPNNIQWNQSQRV-----FDNPPEQGIPTIITWNQGGNDVAVEGSWDNWRSRK 168

Query: 177 PLQRSGRDFTIMKVLPAGVYQYRFLVDGQWRYSPELPWGQDDVGNAYNVLD--------- 217
            LQ+SG+D +I+ VLP+G+Y Y+ +VDG+ +Y P+LP+  D+VGN  N+LD         
Sbjct: 169 KLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPENP 228

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g06550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY5	7.3e-57	44.00	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q84VQ1	5.6e-33	35.17	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
O43741	4.0e-15	32.86	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]
Q9QZH4	9.0e-15	41.67	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]
Q6PAM0	1.2e-14	33.33	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]

BLAST of Cp4.1LG20g06550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520032.1	1.15e-143	74.24	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp...	[more]
XP_022927294.1	3.25e-141	73.65	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] ...	[more]
XP_023001594.1	9.61e-138	72.20	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima]	[more]
XP_038895464.1	4.77e-112	61.51	SNF1-related protein kinase regulatory subunit beta-2-like [Benincasa hispida]	[more]
XP_008463594.1	1.58e-110	61.18	PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 isoform X2 [Cuc...	[more]

BLAST of Cp4.1LG20g06550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHM4	1.57e-141	73.65	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata...	[more]
A0A6J1KN65	4.66e-138	72.20	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima O...	[more]
A0A1S3CJK5	7.64e-111	61.18	SNF1-related protein kinase regulatory subunit beta-2 isoform X2 OS=Cucumis melo...	[more]
A0A6J1CLZ4	1.61e-109	59.47	SNF1-related protein kinase regulatory subunit beta-2 OS=Momordica charantia OX=...	[more]
A0A0A0LYK2	8.95e-108	58.82	AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181340 PE=3...	[more]

BLAST of Cp4.1LG20g06550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16360.1	5.7e-57	46.01	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	5.7e-57	46.01	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	5.4e-55	45.63	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.1	4.0e-34	35.17	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	1.5e-28	30.40	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 101..188 e-value: 2.8E-23 score: 83.6
None	No IPR available	GENE3D	2.20.25.290		coord: 189..216 e-value: 6.5E-8 score: 34.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..24
None	No IPR available	PANTHER	PTHR46316:SF2	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2	coord: 188..219 coord: 1..188
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 110..186 e-value: 1.69073E-25 score: 93.0472
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 195..216 e-value: 2.1E-5 score: 24.7
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 109..188 e-value: 8.9E-30 score: 102.7
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 188..219 coord: 1..188
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 187..218
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 108..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g06550.1	Cp4.1LG20g06550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding