Cp4.1LG20g06150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AACCAGAAGACCTTAATTTATCCGAAAGGCTTCAACATCACATGGGGCAACGACAATCGCTATTGGCGCTTGCCTCCTCAATCTCGAACCCCGTAAGCCGCTCTCTTTATATCTCATTCTTCCCCACCTCTACATTTTTAACCTTGTTTCCATTACTCTACAGGATGAAGGACTCAGCTGCTGAGCTGCTGCAAGTGTCGTGGTTGGAGGTGACATGCTCGACGGACAATGTGGAGGTTGGAAAAAGCTACAAAGTTGGGTTCAATCTGTCCATGACGGCGGCGGCTTTTGGATGGAAAGGGTGTACTGTTTACATAATGGCCAAGATTGGGAAGGCTGGAATGTTCGTGTATAAGAAGGTGTGCCTCGACACGAAAGAGACGAACTTCGACATGCCGGAGGAGGGTCTCGTTATCACTGTGAAACCCCCGACAAGCTCGCCGGGAGATAACCATCTCTACTTCGGAATGTATGAGGTTTGGAGCGGGAGGTGGAAGGGAGGACTTAAGATTCATCATGCATTTGTGGAGAAGGTCAACTAGCTAAGCATCACGTTAGAATCATGGAATGTGACAGTCATATATTGAACGGTTTGAAATAATTAGGTGTCATATTATAAATACATTATTGACACATGATTTAGTTTTTGTAAAATTTATTAATCGGGGAGTATTGCTAAGAGAAATTATTAGTATTTCTCTATGTACGATCTATGCAAATACACGTGAGCTCACTAGGCAAGCTCATTAATATACTACTAGGCTTGACTGCGAGTAAGCACACGCTCCACTATTGAAACTGACGAAAAAGAAAGGAATGTGAATAATATCATGAACGTATGCATTTACACATTACATAACTGGAGAAGTAATCCATGATTATACGAACATACAATATGCATGAGGTGTTTTAAACCTCTCCTCACAGACGTGTTTTAAAATCGTGAGGCTAACGGCAATACGTAACGACCAAAGCGGACAATATCTGCTAGGGAGAGGTTTACACAGCCTTACAAAGAAATTTTTCGTTCTCTTCTCCCATCGATCTGGTGTGTTAATAACACGTAGTCAATATCAAACCCAGACACCGGTTGATGTATCAATGAGGATGTTAAGCACCTAAACGGGGTGAATTGTGAGATCCCAATCTGTTAGATAGGGGACCGAAACATTCCTTATAACGGGTGTGTAAATTTCTCTCTAGCAGACGCGTTTTAAATACGTAACAGGCCAAACAGACAACATTTGCTAGCGGTGGGTTTGAATTGCTACAATAGATTACGTTTTATTCATGCATCAAACAATTTCATCTAACTTAGCCTCTCGACATTCCAACAGTATAAGTTTAATCTAATGATGCTAAGCTCGTGTGAGCTAATTGTTCCCTATGCTCAACCTTATCATAATCAAATTTCACTTACGATATTGCATTCATTCAAGAGATCAATCTTAAAGTTTATTCACGATACTATATAGCCCGATATAGCGCGTGGTTCATGACTCACCAGCTCGAAAAGTGGCACCTTTTACCCCAAAACTTCCGACCCCAGCTATAATTTTTCAATTACAGAACTAG AACCAGAAGACCTTAATTTATCCGAAAGGCTTCAACATCACATGGGGCAACGACAATCGCTATTGGCGCTTGCCTCCTCAATCTCGAACCCCGATGAAGGACTCAGCTGCTGAGCTGCTGCAAGTGTCGTGGTTGGAGGTGACATGCTCGACGGACAATGTGGAGGTTGGAAAAAGCTACAAAGTTGGGTTCAATCTGTCCATGACGGCGGCGGCTTTTGGATGGAAAGGGTGTACTGTTTACATAATGGCCAAGATTGGGAAGGCTGGAATGTTCGTGTATAAGAAGGTGTGCCTCGACACGAAAGAGACGAACTTCGACATGCCGGAGGAGGGTCTCGTTATCACTGTGAAACCCCCGACAAGCTCGCCGGGAGATAACCATCTCTACTTCGGAATGTATGAGAACTAG AACCAGAAGACCTTAATTTATCCGAAAGGCTTCAACATCACATGGGGCAACGACAATCGCTATTGGCGCTTGCCTCCTCAATCTCGAACCCCGATGAAGGACTCAGCTGCTGAGCTGCTGCAAGTGTCGTGGTTGGAGGTGACATGCTCGACGGACAATGTGGAGGTTGGAAAAAGCTACAAAGTTGGGTTCAATCTGTCCATGACGGCGGCGGCTTTTGGATGGAAAGGGTGTACTGTTTACATAATGGCCAAGATTGGGAAGGCTGGAATGTTCGTGTATAAGAAGGTGTGCCTCGACACGAAAGAGACGAACTTCGACATGCCGGAGGAGGGTCTCGTTATCACTGTGAAACCCCCGACAAGCTCGCCGGGAGATAACCATCTCTACTTCGGAATGTATGAGAACTAG NQKTLIYPKGFNITWGNDNRYWRLPPQSRTPMKDSAAELLQVSWLEVTCSTDNVEVGKSYKVGFNLSMTAAAFGWKGCTVYIMAKIGKAGMFVYKKVCLDTKETNFDMPEEGLVITVKPPTSSPGDNHLYFGMYEN Homology
BLAST of Cp4.1LG20g06150 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.1e-21 Identity = 59/146 (40.41%), Postives = 79/146 (54.11%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. NCBI nr
Match: XP_023519279.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 288 bits (738), Expect = 7.15e-98 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. NCBI nr
Match: KAG6583795.1 (Protein PHLOEM PROTEIN 2-LIKE A9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019418.1 Protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 276 bits (706), Expect = 5.40e-93 Identity = 128/135 (94.81%), Postives = 132/135 (97.78%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. NCBI nr
Match: XP_022927159.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita moschata]) HSP 1 Score: 274 bits (701), Expect = 3.12e-92 Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. NCBI nr
Match: XP_023001619.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita maxima]) HSP 1 Score: 260 bits (664), Expect = 1.51e-86 Identity = 122/135 (90.37%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. NCBI nr
Match: XP_008459052.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043222.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa] >TYK21342.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa]) HSP 1 Score: 230 bits (587), Expect = 8.95e-75 Identity = 110/140 (78.57%), Postives = 122/140 (87.14%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. ExPASy TrEMBL
Match: A0A6J1EH83 (protein PHLOEM PROTEIN 2-LIKE A9 OS=Cucurbita moschata OX=3662 GN=LOC111434093 PE=4 SV=1) HSP 1 Score: 274 bits (701), Expect = 1.51e-92 Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. ExPASy TrEMBL
Match: A0A6J1KN91 (protein PHLOEM PROTEIN 2-LIKE A9 OS=Cucurbita maxima OX=3661 GN=LOC111495693 PE=4 SV=1) HSP 1 Score: 260 bits (664), Expect = 7.30e-87 Identity = 122/135 (90.37%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. ExPASy TrEMBL
Match: A0A5A7TIT6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00100 PE=4 SV=1) HSP 1 Score: 230 bits (587), Expect = 4.33e-75 Identity = 110/140 (78.57%), Postives = 122/140 (87.14%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. ExPASy TrEMBL
Match: A0A1S3CAI0 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498273 PE=4 SV=1) HSP 1 Score: 230 bits (587), Expect = 4.33e-75 Identity = 110/140 (78.57%), Postives = 122/140 (87.14%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. ExPASy TrEMBL
Match: A0A0A0LYD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G703580 PE=4 SV=1) HSP 1 Score: 226 bits (576), Expect = 2.05e-73 Identity = 108/140 (77.14%), Postives = 119/140 (85.00%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 107.5 bits (267), Expect = 8.8e-24 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 0
BLAST of Cp4.1LG20g06150 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 102.8 bits (255), Expect = 2.2e-22 Identity = 59/146 (40.41%), Postives = 79/146 (54.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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