Cp4.1LG20g05400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g05400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxilin-related protein 2 isoform X2
Location	Cp4.1LG20: 3154536 .. 3158026 (-)
RNA-Seq Expression	Cp4.1LG20g05400
Synteny	Cp4.1LG20g05400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCCCACATTGTTGGATAAATATACATGAAGGCAGAGCTTCCATTTATTTTCATGGTGTTTTGCCACTGCCACTACCACCGCCGCCGCCACCACCACCACCTTATATTTCTTCATTCTCTTTTTCCTCAGAATCTCGCCGGGAAATGGACCATTGCTGGCGAGTCCGTTTTGGAATTCCACAGTTTCGTTCCCGGAGATCGGAACACGAAACCATGGCCAAACCTACATGTTCTCGTGCTGCAACTTTCGACGCCGATGACTTCTCCGATGTCTTCGGCGGTCCGCCACGGACCATCCTCTTCAGGCAATTTTCCGACACGATTGAGGGTAAAGACTCCACTTCCTTCTACGAAGAAGTATTCCAATCCCCCGAGTTAGTTTCTCAGCCGCAGAAGGGCGGCCGGAGCTTGCCGGCCTTCAGAATCCCTATTAAAGAGGATAGGTTTTATCGCTTTATTTTTGGATCGGAAGACGGCCGACAATCGAGAGATAGGTCAGAACCGAACTCCAAGGAATTCACCAGATCGAACTCGTCTTCGGTATCCAGCCCCTTTCGGCCGATCATCGGAGATGACGTGGCATTCCCTTCGTCGTCTTCAAATCTCAGGTTGGTTGTGTTCTGGAGAATGTGAGGGGGCCTAAACCCTATTTTGGATTATTCGATTGGACATGTATGCTCTTAAGGCTTAGGTCATTTTTCATTTGTTGTTTGATATCGTTTGGCTGTTTTATGGGCATAACTGAGAAAGAATTGATAATCAATATAGGTTTTGATTCATAGCAGTAACCAATTTTGTTTTATTGATGACTTTGCATAGACATTAATGATAAATCTTGAATGGTTTTCATTACAAATGTCTGTAAATTGATGCTGTTTTGAAGCTTGATTTGACCAGCATTGTCTAGCACTTGGTTTAACGTTGTTCATTGTTCCTTAATTTAATTTGATTGAAATAGGCCAAGCAATGTCCCAACAAAGTGGAGCTCATACAGAACCATGTTCAAGGAACAAGAAATGCCTCATATCGATAACCCGTATGTGGAAAATGAACATTATGATAGTTACAGAAGCTCGGGCCATGTGTTCGGAGTACCCGTGTCGTCCCCAGAAACCATTAGTCTGGAACCAAATTCATTTAGAAGCATCAAGATCTGTGTGGATGATTTGGAACAAAACTCCCCATCATCTGCTGGTTCTTCACACTGTGAGGATCCAGTTGACTATAGTGGAATTTACTGTAATGTTTTACCAGAAGACGACGAGGACGACGAAGATGCTATGAGTTCTTATGTCATTGAGATAACTTCCATCAATAGAGAAGAATATAGAGAAGAAGTTTCCATTGATGAAGCAATTGCTTGGGCTAAATCAAAGTATCAAAGTCCTGTATCTGAGACAGATTTGAGTGGTAGACAACAAGAAAGTGAGCAATCTGGGGAAGAAGAAGGTGAACTTCAGTAACAGCTCATGTATTTCCATGCAGGACCTGTTTTATATGAATGTATAAACTCAATAGTGAAAGTTCTAACAGTAGTGGCCTCTTTTTGTTTTGCAGGAAGACCTGTTTCATTTGAATCTTCAGGTCAGCAGTTGAATGGAAATGGATTGTCACAGCCCGCAGAGGTAACGTTCATACTGTTCATCTAATCTAAATATTGATGAAAAAACATTCTGGATTATGCTTGAAAGAATCTGTGCATTGAGTTCATTGAAGTTTTCTTGTGATGGTGTACTAAGTAAGGTGCTTTGCCTAACTGGTTGCTCTTGTTTCTGCCTCAGACACACCAGAAAGATGTAAAAGTTGAAGGAGGAAAGCCACGGGTTGACATTGATGTAAGTAATTGTCACAAGGCTTCATATTTGTAAGCAGGGCATCATTTCATTTTCACTCTAGGATATTTCCATTTTCACTCTAGGATATTTTCATTTTCACTATGGGATATTTTCCTGATTGATTGTGTGAGATCTCACACCAGTTGGAGAGGGGAATGAAACATTCTTTATAAGGGTGTGGGAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGATGAAGCCCGAAAAGGAAAGCCCAAAGAGGACAATATCTGCTTACAAATGGTATTAGAGCCAGACACCGAGCAGTATGTCTGTGAGGACGGTGAGGCTCGAAGGAGGTGGACACCGGGCAGTGTGCTAGCGAGGATGGTGAACCCTGAAGGGGGTGGACATCGGGCGATGTGCCAGCGAGGACGCTAGGCCCCGAAGGCGGGTGTATTGTGAGATCCCACATCGATTGGAGAGAGGAACGAGTGTCAGCAAGGACGCTGGGCATGAAGGGGGTGGATTGTGAGATCCCACGTCGGTTTCACCCTAGCAGACGCGTTTTAAAAATCTTGAGGGGAAGCCCGAAAGAGAAAACCCAAAGAGGACAATATCTACTAGCAGTGGGCTTGGGCTGTAACATGGCTATGTGGCAGAAAAATTATCTCATCATGTACCAGGGACAAGACTTGAAATGGGTTAGTTTAATTTGAGGACTAAGTATTTATTCGGCTACCTACATGGTGGATGGAAGTAATACAATCCTCTATATCATGAAACTTAGGCATGTTGCTCATATTCTTTCTTACTAAGGAACCAGTTTTTGATCTCTGTTTATTCTCCTAATGTCAAAATTACAGAAAGAATTGGAAGGATTAGATGAGAAAATAAAGTTATGGTCAGCTGGCAAGGAGACCAACATCCGCTTGCTACTTTCTACGCTTCATTACGTAAGTTCTTCAGTGTTGAATAACATCGTTCACATCTCCCTCCTCTTCATGTTATAGCCTTTGATCTAACAACATGCAGCCATTGTGTGGGATTAATACAGATATTGTGGTCAAGTAGTGGGTGGTCTCCAATATCCTTGACAAACCTGATTGGAGGCTCACAAATGAAGAAGGCTTATCAAAAAGCAAGATTGTGTCTACACCCAGACAAGCTGCAGCAAAGAGGAGCGACAATGCTGCAAAAATATGTTGCGGAGAAGGCTTTTACCATCCTTCAGGTAACTTTTTGTTCATGCAACATAATTAATGGCTATCCTATGTAATCACGAACTTGAAATCAAACACCAGATCAACAGTTTTGATTTTGTTTGTCCCTGTTCTTTAATAGGAAGCGTGGGCTGTATATATATCCCAAGATGTTTTCCTCAACTAGAGCCTAATTTCAGTGTGAAGCTCAAGAAAGTAGCAGCAAATCTGGAACATTCACAAGGTGATACTCATTTTGCATTAAGAATTCGAGAGTGGACCTGATTATGTATTAAGAAAGTTGTGTAAAACAGAAAATCAGGTAAACTCCGGCCTGTTCTGTATGTAAGATATGTCTGCATATATGTGTAGTGTATGTGTAGACTTGTATTTCATTGTGCAGCTACATTCTAAAGATGATTGCTGAACACTTGCGCTTTGCATATGTACAAACACATTTCGATAGATTTATATAAATAGATGTTCA

mRNA sequence

CAGCCCACATTGTTGGATAAATATACATGAAGGCAGAGCTTCCATTTATTTTCATGGTGTTTTGCCACTGCCACTACCACCGCCGCCGCCACCACCACCACCTTATATTTCTTCATTCTCTTTTTCCTCAGAATCTCGCCGGGAAATGGACCATTGCTGGCGAGTCCGTTTTGGAATTCCACAGTTTCGTTCCCGGAGATCGGAACACGAAACCATGGCCAAACCTACATGTTCTCGTGCTGCAACTTTCGACGCCGATGACTTCTCCGATGTCTTCGGCGGTCCGCCACGGACCATCCTCTTCAGGCAATTTTCCGACACGATTGAGGGTAAAGACTCCACTTCCTTCTACGAAGAAGTATTCCAATCCCCCGAGTTAGTTTCTCAGCCGCAGAAGGGCGGCCGGAGCTTGCCGGCCTTCAGAATCCCTATTAAAGAGGATAGGTTTTATCGCTTTATTTTTGGATCGGAAGACGGCCGACAATCGAGAGATAGGTCAGAACCGAACTCCAAGGAATTCACCAGATCGAACTCGTCTTCGGTATCCAGCCCCTTTCGGCCGATCATCGGAGATGACGTGGCATTCCCTTCGTCGTCTTCAAATCTCAGGTCATTTTTCATTTGTTGTTTGATATCGTTTGGCTGTTTTATGGGCATAACTGAGAAAGAATTGATAATCAATATAGGCCAAGCAATGTCCCAACAAAGTGGAGCTCATACAGAACCATGTTCAAGGAACAAGAAATGCCTCATATCGATAACCCGAAGACCTGTTTCATTTGAATCTTCAGGTCAGCAGTTGAATGGAAATGGATTGTCACAGCCCGCAGAGACACACCAGAAAGATGTAAAAGTTGAAGGAGGAAAGCCACGGGTTGACATTGATAAAGAATTGGAAGGATTAGATGAGAAAATAAAGTTATGGTCAGCTGGCAAGGAGACCAACATCCGCTTGCTACTTTCTACGCTTCATTACTGGGTGGTCTCCAATATCCTTGACAAACCTGATTGGAGGCTCACAAATGAAGAAGGCTTATCAAAAAGCAAGATTGTGTCTACACCCAGACAAGCTGCAGCAAAGAGGAGCGACAATGCTGCAAAAATATGTTGCGGAGAAGGCTTTTACCATCCTTCAGGAAGCGTGGGCTGTATATATATCCCAAGATGTTTTCCTCAACTAGAGCCTAATTTCAGTGTGAAGCTCAAGAAAGTAGCAGCAAATCTGGAACATTCACAAGGTGATACTCATTTTGCATTAAGAATTCGAGAGTGGACCTGATTATGTATTAAGAAAGTTGTGTAAAACAGAAAATCAGGTAAACTCCGGCCTGTTCTGTATGTAAGATATGTCTGCATATATGTGTAGTGTATGTGTAGACTTGTATTTCATTGTGCAGCTACATTCTAAAGATGATTGCTGAACACTTGCGCTTTGCATATGTACAAACACATTTCGATAGATTTATATAAATAGATGTTCA

Coding sequence (CDS)

ATGGACCATTGCTGGCGAGTCCGTTTTGGAATTCCACAGTTTCGTTCCCGGAGATCGGAACACGAAACCATGGCCAAACCTACATGTTCTCGTGCTGCAACTTTCGACGCCGATGACTTCTCCGATGTCTTCGGCGGTCCGCCACGGACCATCCTCTTCAGGCAATTTTCCGACACGATTGAGGGTAAAGACTCCACTTCCTTCTACGAAGAAGTATTCCAATCCCCCGAGTTAGTTTCTCAGCCGCAGAAGGGCGGCCGGAGCTTGCCGGCCTTCAGAATCCCTATTAAAGAGGATAGGTTTTATCGCTTTATTTTTGGATCGGAAGACGGCCGACAATCGAGAGATAGGTCAGAACCGAACTCCAAGGAATTCACCAGATCGAACTCGTCTTCGGTATCCAGCCCCTTTCGGCCGATCATCGGAGATGACGTGGCATTCCCTTCGTCGTCTTCAAATCTCAGGTCATTTTTCATTTGTTGTTTGATATCGTTTGGCTGTTTTATGGGCATAACTGAGAAAGAATTGATAATCAATATAGGCCAAGCAATGTCCCAACAAAGTGGAGCTCATACAGAACCATGTTCAAGGAACAAGAAATGCCTCATATCGATAACCCGAAGACCTGTTTCATTTGAATCTTCAGGTCAGCAGTTGAATGGAAATGGATTGTCACAGCCCGCAGAGACACACCAGAAAGATGTAAAAGTTGAAGGAGGAAAGCCACGGGTTGACATTGATAAAGAATTGGAAGGATTAGATGAGAAAATAAAGTTATGGTCAGCTGGCAAGGAGACCAACATCCGCTTGCTACTTTCTACGCTTCATTACTGGGTGGTCTCCAATATCCTTGACAAACCTGATTGGAGGCTCACAAATGAAGAAGGCTTATCAAAAAGCAAGATTGTGTCTACACCCAGACAAGCTGCAGCAAAGAGGAGCGACAATGCTGCAAAAATATGTTGCGGAGAAGGCTTTTACCATCCTTCAGGAAGCGTGGGCTGTATATATATCCCAAGATGTTTTCCTCAACTAGAGCCTAATTTCAGTGTGAAGCTCAAGAAAGTAGCAGCAAATCTGGAACATTCACAAGGTGATACTCATTTTGCATTAAGAATTCGAGAGTGGACCTGA

Protein sequence

MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTIEGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEPNSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLRSFFICCLISFGCFMGITEKELIINIGQAMSQQSGAHTEPCSRNKKCLISITRRPVSFESSGQQLNGNGLSQPAETHQKDVKVEGGKPRVDIDKELEGLDEKIKLWSAGKETNIRLLLSTLHYWVVSNILDKPDWRLTNEEGLSKSKIVSTPRQAAAKRSDNAAKICCGEGFYHPSGSVGCIYIPRCFPQLEPNFSVKLKKVAANLEHSQGDTHFALRIREWT

Homology

[Close]

BLAST of Cp4.1LG20g05400 vs. NCBI nr
Match: XP_023519183.1 (uncharacterized protein LOC111782633 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403 bits (1036), Expect = 6.64e-135
Identity = 239/389 (61.44%), Postives = 248/389 (63.75%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI 60
           MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI
Sbjct: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI 60

Query: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120
           EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP
Sbjct: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120

Query: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR------------------------- 180
           NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR                         
Sbjct: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLRPSNVPTKWSSYRTMFKEQEMPHIDN 180

Query: 181 ------------------------------------SFFICC----------LISFGC-- 240
                                               S  IC             S  C  
Sbjct: 181 PYVENEHYDSYRSSGHVFGVPVSSPETISLEPNSFRSIKICVDDLEQNSPSSAGSSHCED 240

Query: 241 ---FMGI----------------------------TEKELIINIGQAMSQQSGAHTEPCS 277
              + GI                             E    ++I +A++     +  P S
Sbjct: 241 PVDYSGIYCNVLPEDDEDDEDAMSSYVIEITSINREEYREEVSIDEAIAWAKSKYQSPVS 300

[Close]

BLAST of Cp4.1LG20g05400 vs. NCBI nr
Match: KAG6583876.1 (Auxilin-related protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402 bits (1034), Expect = 8.70e-135
Identity = 234/376 (62.23%), Postives = 247/376 (65.69%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI 60
           MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDT 
Sbjct: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTF 60

Query: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120
           EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP
Sbjct: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120

Query: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR------------------------- 180
           NSKEFTRSNSSS+SSPFRPIIGDDVAFPSSSSNLR                         
Sbjct: 121 NSKEFTRSNSSSLSSPFRPIIGDDVAFPSSSSNLRPSNVPTKWSSYRTMFKEQEMPQFPP 180

Query: 181 --------------------------------------------SFFICC---------- 240
                                                       S  IC           
Sbjct: 181 DFLPHINNPYVENEHYDSYRSSGHVFGVPMSSPETISLEPNSFRSIKICVDDLEQNSPSS 240

Query: 241 --------LISFG---CFMGITEK-ELIINIGQAMSQQSGAHTEPCS------RNKKCLI 277
                    + +G   C   I E+    ++I +A++     +  P S      R ++   
Sbjct: 241 AGSSHCEDPVDYGGIYCNRRIREEYREEVSIDEAIAWAKSKYQSPVSETDLSGRQQESEQ 300

[Close]

BLAST of Cp4.1LG20g05400 vs. NCBI nr
Match: XP_023001425.1 (uncharacterized protein LOC111495561 [Cucurbita maxima])

HSP 1 Score: 395 bits (1015), Expect = 1.30e-131
Identity = 235/397 (59.19%), Postives = 247/397 (62.22%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI 60
           MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDT 
Sbjct: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTF 60

Query: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120
           EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP
Sbjct: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120

Query: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR------------------------- 180
           NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR                         
Sbjct: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLRPSNVPTKWSSYRTMFKEQEMPQFPP 180

Query: 181 --------------------------------------------SFFICC---------- 240
                                                       S  IC           
Sbjct: 181 DFLPHIDNPYVENEHNDSYRSSGHVFGVPMSSPETISLEPNSFRSIKICVDDLEQNSPSS 240

Query: 241 --------LISFG---C--------------------FMGITEKELI--INIGQAMSQQS 277
                    + +G   C                       I  +E    ++I +A++   
Sbjct: 241 AGSSHCEDPVDYGGIYCNVLPEDDEDDEDAMSSYVIEITSINREEYREEVSIDEAIAWAK 300

[Close]

BLAST of Cp4.1LG20g05400 vs. NCBI nr
Match: XP_022927195.1 (uncharacterized protein LOC111434115 [Cucurbita moschata])

HSP 1 Score: 394 bits (1013), Expect = 2.60e-131
Identity = 236/397 (59.45%), Postives = 246/397 (61.96%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI 60
           MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDT 
Sbjct: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTF 60

Query: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120
           EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP
Sbjct: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120

Query: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR------------------------- 180
           NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR                         
Sbjct: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLRPSNAPTKWSSYRTMFKEQEMPQFPP 180

Query: 181 --------------------------------------------SFFICC---------- 240
                                                       S  IC           
Sbjct: 181 DLLPHIDNPYVENEHYDSYRSSGHVFGVPVSSPETISLEPNSFRSIKICVDDLEQNSPSS 240

Query: 241 LISFGC-----FMGI----------------------------TEKELIINIGQAMSQQS 277
             S  C     + GI                             E    ++I +A++   
Sbjct: 241 AGSSHCEDPVDYSGIYCNVLPEDDEDDEDAMSSYVIEITSINREEYREEVSIDEAIAWAK 300

[Close]

BLAST of Cp4.1LG20g05400 vs. NCBI nr
Match: KAG7019497.1 (Auxilin-related protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 393 bits (1010), Expect = 7.39e-131
Identity = 234/397 (58.94%), Postives = 247/397 (62.22%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI 60
           MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDT 
Sbjct: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTF 60

Query: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120
           EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP
Sbjct: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120

Query: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR------------------------- 180
           NSKEFTRSNSSS+SSPFRPIIGDDVAFPSSSSNLR                         
Sbjct: 121 NSKEFTRSNSSSLSSPFRPIIGDDVAFPSSSSNLRPSNVPTKWSSYRTMFKEQEMPQFPP 180

Query: 181 --------------------------------------------SFFICC---------- 240
                                                       S  IC           
Sbjct: 181 DFLPHINNPYVENEHYDSYRSSGHVFGVPMSSPETISLEPNSFRSIKICVDDLEQNSPSS 240

Query: 241 --------LISFG---C--------------------FMGITEKELI--INIGQAMSQQS 277
                    + +G   C                       I  +E    ++I +A++   
Sbjct: 241 AGSSHCEDPVDYGGIYCNVLPEDDEDDEDAMSSYVIEITSINREEYREEVSIDEAIAWAK 300

[Close]

BLAST of Cp4.1LG20g05400 vs. ExPASy TrEMBL
Match: A0A6J1KL61 (uncharacterized protein LOC111495561 OS=Cucurbita maxima OX=3661 GN=LOC111495561 PE=4 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 6.27e-132
Identity = 235/397 (59.19%), Postives = 247/397 (62.22%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI 60
           MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDT 
Sbjct: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTF 60

Query: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120
           EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP
Sbjct: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120

Query: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR------------------------- 180
           NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR                         
Sbjct: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLRPSNVPTKWSSYRTMFKEQEMPQFPP 180

Query: 181 --------------------------------------------SFFICC---------- 240
                                                       S  IC           
Sbjct: 181 DFLPHIDNPYVENEHNDSYRSSGHVFGVPMSSPETISLEPNSFRSIKICVDDLEQNSPSS 240

Query: 241 --------LISFG---C--------------------FMGITEKELI--INIGQAMSQQS 277
                    + +G   C                       I  +E    ++I +A++   
Sbjct: 241 AGSSHCEDPVDYGGIYCNVLPEDDEDDEDAMSSYVIEITSINREEYREEVSIDEAIAWAK 300

[Close]

BLAST of Cp4.1LG20g05400 vs. ExPASy TrEMBL
Match: A0A6J1EN77 (uncharacterized protein LOC111434115 OS=Cucurbita moschata OX=3662 GN=LOC111434115 PE=4 SV=1)

HSP 1 Score: 394 bits (1013), Expect = 1.26e-131
Identity = 236/397 (59.45%), Postives = 246/397 (61.96%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI 60
           MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDT 
Sbjct: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTF 60

Query: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120
           EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP
Sbjct: 61  EGKDSTSFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSEP 120

Query: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR------------------------- 180
           NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLR                         
Sbjct: 121 NSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSNLRPSNAPTKWSSYRTMFKEQEMPQFPP 180

Query: 181 --------------------------------------------SFFICC---------- 240
                                                       S  IC           
Sbjct: 181 DLLPHIDNPYVENEHYDSYRSSGHVFGVPVSSPETISLEPNSFRSIKICVDDLEQNSPSS 240

Query: 241 LISFGC-----FMGI----------------------------TEKELIINIGQAMSQQS 277
             S  C     + GI                             E    ++I +A++   
Sbjct: 241 AGSSHCEDPVDYSGIYCNVLPEDDEDDEDAMSSYVIEITSINREEYREEVSIDEAIAWAK 300

[Close]

BLAST of Cp4.1LG20g05400 vs. ExPASy TrEMBL
Match: A0A5A7UJY3 (Auxilin-related protein 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001080 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 7.17e-93
Identity = 186/399 (46.62%), Postives = 226/399 (56.64%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTC-SRAATFDADDFSDVFGGPPRTILFRQFSDT 60
           MDH WR+RFGIP+FRSRRSEH+++ KPT  S + TF ADDFSDVFGGPP+TILFRQFS+ 
Sbjct: 1   MDHTWRLRFGIPRFRSRRSEHQSLPKPTSNSHSRTFLADDFSDVFGGPPQTILFRQFSER 60

Query: 61  IEGKDST-SFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRS 120
            EG DST SFY+EVF+S +LVS+PQK GRSLPAFRIP+KEDRFYR +FGSEDGR+SRDRS
Sbjct: 61  FEGIDSTTSFYQEVFRSSDLVSRPQKAGRSLPAFRIPVKEDRFYRDVFGSEDGRRSRDRS 120

Query: 121 EPNSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSN------------------------- 180
           EP+SKEFTRSNSSS  +P  P+IGDDVAFPSSSSN                         
Sbjct: 121 EPSSKEFTRSNSSSDFTPLPPVIGDDVAFPSSSSNHRPSNVPTQWNSYRTMFKEQEMPQF 180

Query: 181 --------------------------------------------LRSFFICC-------- 240
                                                        RS  IC         
Sbjct: 181 APDLSPHFDNRYVEDEYDDRYKSSDHGFGEPVSSPETVILEPNSFRSIKICVDDYLEINS 240

Query: 241 ------------LISFGCFMGITEKELI------------------------INIGQAMS 277
                       +   G +  +  ++ +                        ++I +A++
Sbjct: 241 PSSPESSLCEDPVYYGGTYCNVLPEDDVDDEDGMSSYVIEITSINREEYREEVSIDEAIA 300

[Close]

BLAST of Cp4.1LG20g05400 vs. ExPASy TrEMBL
Match: A0A1S3BAV2 (uncharacterized protein LOC103487941 OS=Cucumis melo OX=3656 GN=LOC103487941 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 7.17e-93
Identity = 186/399 (46.62%), Postives = 226/399 (56.64%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTC-SRAATFDADDFSDVFGGPPRTILFRQFSDT 60
           MDH WR+RFGIP+FRSRRSEH+++ KPT  S + TF ADDFSDVFGGPP+TILFRQFS+ 
Sbjct: 1   MDHTWRLRFGIPRFRSRRSEHQSLPKPTSNSHSRTFLADDFSDVFGGPPQTILFRQFSER 60

Query: 61  IEGKDST-SFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRS 120
            EG DST SFY+EVF+S +LVS+PQK GRSLPAFRIP+KEDRFYR +FGSEDGR+SRDRS
Sbjct: 61  FEGIDSTTSFYQEVFRSSDLVSRPQKAGRSLPAFRIPVKEDRFYRDVFGSEDGRRSRDRS 120

Query: 121 EPNSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSN------------------------- 180
           EP+SKEFTRSNSSS  +P  P+IGDDVAFPSSSSN                         
Sbjct: 121 EPSSKEFTRSNSSSDFTPLPPVIGDDVAFPSSSSNHRPSNVPTQWNSYRTMFKEQEMPQF 180

Query: 181 --------------------------------------------LRSFFICC-------- 240
                                                        RS  IC         
Sbjct: 181 APDLSPHFDNRYVEDEYDDRYKSSDHGFGEPVSSPETVILEPNSFRSIKICVDDYLEINS 240

Query: 241 ------------LISFGCFMGITEKELI------------------------INIGQAMS 277
                       +   G +  +  ++ +                        ++I +A++
Sbjct: 241 PSSPESSLCEDPVYYGGTYCNVLPEDDVDDEDGMSSYVIEITSINREEYREEVSIDEAIA 300

[Close]

BLAST of Cp4.1LG20g05400 vs. ExPASy TrEMBL
Match: A0A0A0M107 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G535800 PE=4 SV=1)

HSP 1 Score: 295 bits (755), Expect = 8.77e-93
Identity = 189/398 (47.49%), Postives = 223/398 (56.03%), Query Frame = 0


Query: 1   MDHCWRVRFGIPQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFSDTI 60
           MDH WR+RFGIP+FRSRRSE +T+ KPT    + F ADDFSDVFGGPP+TILFRQFS+  
Sbjct: 1   MDHTWRLRFGIPRFRSRRSERQTLPKPT----SNFLADDFSDVFGGPPQTILFRQFSERF 60

Query: 61  EGKDST-SFYEEVFQSPELVSQPQKGGRSLPAFRIPIKEDRFYRFIFGSEDGRQSRDRSE 120
           EG DST SFYEEVF+S ELVS+PQKGGRSLPAFRIP+KEDRFYR +FGSEDGR+SRDRSE
Sbjct: 61  EGIDSTTSFYEEVFRSSELVSRPQKGGRSLPAFRIPVKEDRFYRDVFGSEDGRRSRDRSE 120

Query: 121 PNSKEFTRSNSSSVSSPFRPIIGDDVAFPSSSSN-------------------------- 180
           P+SKEFTRSNSSS  +  RP+IGDDVAFPSSSSN                          
Sbjct: 121 PSSKEFTRSNSSSDFTRLRPVIGDDVAFPSSSSNHRPTNVPTQWNSYTTMFKEQEMPQFA 180

Query: 181 -------------------------------------------LRSFFICC--------- 240
                                                       RS  IC          
Sbjct: 181 PHLSPHMDNRYVEDEYDDRYKSSDHGFGQPVSSPETVILEPNSFRSIKICVDDYLEINSP 240

Query: 241 -----------LISFGCFMGIT------------------------EKELIINIGQAMS- 277
                      +   G +  +                         E    ++I +A++ 
Sbjct: 241 SSPESSLCEDPVYYDGTYCNVLPEDDDDDEDAMSSYVIEITSINREEYREEVSIDEAIAW 300

[Close]

BLAST of Cp4.1LG20g05400 vs. TAIR 10
Match: AT1G30280.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 113/402 (28.11%), Postives = 158/402 (39.30%), Query Frame = 0


Query: 1   MDHCWRVRFGI---PQFRSRRSEHETMAKPTCSRAATFDADDFSDVFGGPPRTILFRQFS 60
           MD  WR++ G+   P F   R           S  A  DA+DF+DVFGGPPR++L R+FS
Sbjct: 1   MDESWRMKMGLSVDPFFSIARK----------SMDARIDAEDFADVFGGPPRSVLTRKFS 60

Query: 61  DTIEGKDSTSFYEEVFQSPELVS------QPQKGGRSLPAFRIPIKEDRFYRFIFGSEDG 120
                 D   FY+E+FQ P   S        +  GR+LPAFRIP   + FY  +FG   G
Sbjct: 61  GDFSRSD--CFYDEIFQPPGTFSSGGSLASSKSHGRNLPAFRIPSGGEGFYDGVFGGRGG 120

Query: 121 RQSRDRSEPNSKEFTRSNSSSV-----SSPFRP----IIGDDVAFPSSSSNLRSFFICCL 180
                  + +S    RSNSSS+     +SP  P      GDD  F S +S LR       
Sbjct: 121 SAKEGSKKQSSMTKPRSNSSSMLSSEEASPHYPPPAAASGDDSGFSSFTSRLRPL----N 180

Query: 181 ISFGCFMGITEKELIINIGQAMSQQSGAHTEPCSRN---KKCLISITRR----PVSFE-S 240
           +        ++K+    + +A    SG +  P   +   KK     +RR     +S + +
Sbjct: 181 VPSRSHKRESKKQSFSAVPKAKDSFSGQNNTPEKADFYYKKTHFGGSRRASPETISLDPN 240

Query: 241 SGQQLNGNGLSQPA--------------ETHQK-----DVKVE----------------- 283
           S ++++  G S PA               TH K     D KVE                 
Sbjct: 241 SFRRMDDYGPSSPASSPVSSFICEEEDDNTHAKQRTNRDCKVEEVVVEDEEDEEEEEMSS 300

[Close]

BLAST of Cp4.1LG20g05400 vs. TAIR 10
Match: AT1G75310.1 (auxin-like 1 protein )

HSP 1 Score: 42.7 bits (99), Expect = 7.4e-04
Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 228  AETHQKDVKVEGGKPRVDIDKELEGLDEKIKLWSAGKETNIRLLLSTLHY 278
            AE   +D+K +  K + + ++  E LD  +K WS+GKE N+R L+STL Y
Sbjct: 1331 AEKKLRDLKTQ--KEQTERNRLAEALDADVKRWSSGKENNLRALISTLQY 1378

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g05400 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g05400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519183.1	6.64e-135	61.44	uncharacterized protein LOC111782633 [Cucurbita pepo subsp. pepo]	[more]
KAG6583876.1	8.70e-135	62.23	Auxilin-related protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023001425.1	1.30e-131	59.19	uncharacterized protein LOC111495561 [Cucurbita maxima]	[more]
XP_022927195.1	2.60e-131	59.45	uncharacterized protein LOC111434115 [Cucurbita moschata]	[more]
KAG7019497.1	7.39e-131	58.94	Auxilin-related protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG20g05400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KL61	6.27e-132	59.19	uncharacterized protein LOC111495561 OS=Cucurbita maxima OX=3661 GN=LOC111495561...	[more]
A0A6J1EN77	1.26e-131	59.45	uncharacterized protein LOC111434115 OS=Cucurbita moschata OX=3662 GN=LOC1114341...	[more]
A0A5A7UJY3	7.17e-93	46.62	Auxilin-related protein 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BAV2	7.17e-93	46.62	uncharacterized protein LOC103487941 OS=Cucumis melo OX=3656 GN=LOC103487941 PE=...	[more]
A0A0A0M107	8.77e-93	47.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G535800 PE=4 SV=1	[more]

BLAST of Cp4.1LG20g05400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30280.1	1.5e-20	28.11	Chaperone DnaJ-domain superfamily protein	[more]
AT1G75310.1	7.4e-04	42.00	auxin-like 1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 245..308 e-value: 2.2E-5 score: 26.2
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 211..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..134
None	No IPR available	PANTHER	PTHR23172:SF69	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN	coord: 199..277
None	No IPR available	PANTHER	PTHR23172:SF69	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN	coord: 1..164
None	No IPR available	PANTHER	PTHR23172	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	coord: 199..277
None	No IPR available	PANTHER	PTHR23172	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	coord: 1..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g05400.1	Cp4.1LG20g05400.1	mRNA