Cp4.1LG20g05130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g05130
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Cp4.1LG20: 2978012 .. 2978800 (-)
RNA-Seq Expression	Cp4.1LG20g05130
Synteny	Cp4.1LG20g05130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCACCGCCACCGCCACCGCCACCGCCGCCGTCTATATCTCTGCACTCCAGTTTCTTTTCGTCTCTTAAGCAGGTAACTCCCAATTTCAATTCAATTTCCCCTCCCTCTCCCCTGTTTTTCCCCATATGTTTCTTAAATTGATTCACTACACAGGTCGAGAAACGCCTTAAATTAGACAATCCATCGCAACGGGACGCTCTTCGTCCACCATCGCCACGAAGAGCACCGTCATTGCCAGTAGAAATCAGTTCTTCTTCATCGGCCGAAGAGTCCATGAGCACTCCCATGTACCTTCATTTACCCCAAACCAACACAGCCTCCTCCTTACAAGAAAGCAGCGAACCGCCTCCCGAATTCCTCTCGAATTCCTCAGATCTGAAATCAGAATCGAATAGTCCGAATCTCATCGATTGTGGCCAAAGCCGGCCTGTAGATGACATTCAACGGCTGGTTCAACTTCTAGGGTTAGGGGATTCGTTTGAAGAACAGGAATTGGGTGCTCGGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCCTAAAAGGCCCCAAATGTGGAAAGGAGGCGGAGAGGCTAAATGGATGGATTCAGTACTTGTGGAATGGTGGCGGTGAAGCAGAGAGATTAGAGCCTCTTAGATTGGCATATTTACTGATGGGGAAGGCTGTTTTTGCTTCTAATGGCGGCGATAATTGTTTAGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATAA

mRNA sequence

ATGCCGCCACCGCCACCGCCACCGCCACCGCCGCCGTCTATATCTCTGCACTCCAGTTTCTTTTCGTCTCTTAAGCAGGTCGAGAAACGCCTTAAATTAGACAATCCATCGCAACGGGACGCTCTTCGTCCACCATCGCCACGAAGAGCACCGTCATTGCCAGTAGAAATCAGTTCTTCTTCATCGGCCGAAGAGTCCATGAGCACTCCCATGTACCTTCATTTACCCCAAACCAACACAGCCTCCTCCTTACAAGAAAGCAGCGAACCGCCTCCCGAATTCCTCTCGAATTCCTCAGATCTGAAATCAGAATCGAATAGTCCGAATCTCATCGATTGTGGCCAAAGCCGGCCTGTAGATGACATTCAACGGCTGGTTCAACTTCTAGGGTTAGGGGATTCGTTTGAAGAACAGGAATTGGGTGCTCGGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCCTAAAAGGCCCCAAATGTGGAAAGGAGGCGGAGAGGCTAAATGGATGGATTCAGTACTTGTGGAATGGTGGCGGTGAAGCAGAGAGATTAGAGCCTCTTAGATTGGCATATTTACTGATGGGGAAGGCTGTTTTTGCTTCTAATGGCGGCGATAATTGTTTAGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATAA

Coding sequence (CDS)

ATGCCGCCACCGCCACCGCCACCGCCACCGCCGCCGTCTATATCTCTGCACTCCAGTTTCTTTTCGTCTCTTAAGCAGGTCGAGAAACGCCTTAAATTAGACAATCCATCGCAACGGGACGCTCTTCGTCCACCATCGCCACGAAGAGCACCGTCATTGCCAGTAGAAATCAGTTCTTCTTCATCGGCCGAAGAGTCCATGAGCACTCCCATGTACCTTCATTTACCCCAAACCAACACAGCCTCCTCCTTACAAGAAAGCAGCGAACCGCCTCCCGAATTCCTCTCGAATTCCTCAGATCTGAAATCAGAATCGAATAGTCCGAATCTCATCGATTGTGGCCAAAGCCGGCCTGTAGATGACATTCAACGGCTGGTTCAACTTCTAGGGTTAGGGGATTCGTTTGAAGAACAGGAATTGGGTGCTCGGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCCTAAAAGGCCCCAAATGTGGAAAGGAGGCGGAGAGGCTAAATGGATGGATTCAGTACTTGTGGAATGGTGGCGGTGAAGCAGAGAGATTAGAGCCTCTTAGATTGGCATATTTACTGATGGGGAAGGCTGTTTTTGCTTCTAATGGCGGCGATAATTGTTTAGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATAA

Protein sequence

MPPPPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSAEESMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQYLWNGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA

Homology

[Close]

BLAST of Cp4.1LG20g05130 vs. NCBI nr
Match: XP_023519908.1 (uncharacterized protein LOC111783234 [Cucurbita pepo subsp. pepo] >XP_023519909.1 uncharacterized protein LOC111783234 [Cucurbita pepo subsp. pepo] >XP_023519910.1 uncharacterized protein LOC111783234 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463 bits (1191), Expect = 3.08e-164
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MPPPPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSS 60
           MPPPPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSS
Sbjct: 5   MPPPPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSS 64

Query: 61  SSAEESMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVD 120
           SSAEESMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVD
Sbjct: 65  SSAEESMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVD 124

Query: 121 DIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQ 180
           DIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQ
Sbjct: 125 DIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQ 184

Query: 181 YLWNGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
           YLWNGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA
Sbjct: 185 YLWNGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 239

[Close]

BLAST of Cp4.1LG20g05130 vs. NCBI nr
Match: XP_023001462.1 (uncharacterized protein LOC111495590 [Cucurbita maxima] >XP_023001463.1 uncharacterized protein LOC111495590 [Cucurbita maxima] >XP_023001464.1 uncharacterized protein LOC111495590 [Cucurbita maxima])

HSP 1 Score: 443 bits (1139), Expect = 2.61e-156
Identity = 223/232 (96.12%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 4   PPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSA 63
           PPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSS 
Sbjct: 8   PPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSV 67

Query: 64  EESMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVDDIQ 123
           EES+STPMYLHL QTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQ+RPVDDIQ
Sbjct: 68  EESLSTPMYLHLSQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQNRPVDDIQ 127

Query: 124 RLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQYLW 183
           RLVQLLG GDSFEE+ELGARSGCNGCEGCESGFYSKIVGLKGPKCGKE ERLNGWIQY W
Sbjct: 128 RLVQLLGFGDSFEEKELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFW 187

Query: 184 NGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
            GGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA
Sbjct: 188 TGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 239

[Close]

BLAST of Cp4.1LG20g05130 vs. NCBI nr
Match: KAG7019524.1 (hypothetical protein SDJN02_18485 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439 bits (1128), Expect = 1.07e-154
Identity = 220/230 (95.65%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 6   PPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSAEE 65
           PPPPPPPSISLHSSFFSSLKQVEKRLK DNPSQRDALRPPSPRRAPSLPVEISSSSS EE
Sbjct: 6   PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEE 65

Query: 66  SMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVDDIQRL 125
           S+STPMYLHLPQTNT SSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQ+RPVDDIQRL
Sbjct: 66  SLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQNRPVDDIQRL 125

Query: 126 VQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQYLWNG 185
           VQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKE ERLNGWIQY W G
Sbjct: 126 VQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTG 185

Query: 186 GGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
           GGEAERLEPLRLAYLLMGKAVFASNG D+CLEGLEFPSTVEDFLLNDPPA
Sbjct: 186 GGEAERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA 235

[Close]

BLAST of Cp4.1LG20g05130 vs. NCBI nr
Match: XP_022927255.1 (uncharacterized protein LOC111434155 [Cucurbita moschata] >XP_022927256.1 uncharacterized protein LOC111434155 [Cucurbita moschata])

HSP 1 Score: 438 bits (1127), Expect = 1.64e-154
Identity = 221/232 (95.26%), Postives = 224/232 (96.55%), Query Frame = 0


Query: 4   PPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSA 63
           PPPPPPP PSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSS 
Sbjct: 6   PPPPPPPAPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSV 65

Query: 64  EESMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVDDIQ 123
           EES+STPMYLHLPQTNT SSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQ+RPVDDIQ
Sbjct: 66  EESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQNRPVDDIQ 125

Query: 124 RLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQYLW 183
           RLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKE ERLNGWI Y W
Sbjct: 126 RLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIHYFW 185

Query: 184 NGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
            GGGEAERLEPLRLAYLLMGKAVFASNG D+CLEGLEFPSTVEDFLLNDPPA
Sbjct: 186 TGGGEAERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA 237

[Close]

BLAST of Cp4.1LG20g05130 vs. NCBI nr
Match: KAG6583907.1 (hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 435 bits (1118), Expect = 3.58e-153
Identity = 219/230 (95.22%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 6   PPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSAEE 65
           PPPPPPPSISLHSSFFSSLKQVEKRLKLD+PSQRDALRPPSPRRA SLPVEI SSSS EE
Sbjct: 6   PPPPPPPSISLHSSFFSSLKQVEKRLKLDHPSQRDALRPPSPRRASSLPVEIGSSSSFEE 65

Query: 66  SMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVDDIQRL 125
           S+STPMYLHLPQTNT SSLQESSEPPPEFLSNSSDLKSESNSPNLIDCG +RPVDDIQRL
Sbjct: 66  SLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGHNRPVDDIQRL 125

Query: 126 VQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQYLWNG 185
           VQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKE ERLNGWIQYLWNG
Sbjct: 126 VQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYLWNG 185

Query: 186 GGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
           GGEAERLEPLRLAYLLMGKAVFASNG D+CLEGLEFPSTVEDFLLNDPPA
Sbjct: 186 GGEAERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA 235

[Close]

BLAST of Cp4.1LG20g05130 vs. ExPASy TrEMBL
Match: A0A6J1KGL6 (uncharacterized protein LOC111495590 OS=Cucurbita maxima OX=3661 GN=LOC111495590 PE=4 SV=1)

HSP 1 Score: 443 bits (1139), Expect = 1.26e-156
Identity = 223/232 (96.12%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 4   PPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSA 63
           PPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSS 
Sbjct: 8   PPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSV 67

Query: 64  EESMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVDDIQ 123
           EES+STPMYLHL QTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQ+RPVDDIQ
Sbjct: 68  EESLSTPMYLHLSQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQNRPVDDIQ 127

Query: 124 RLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQYLW 183
           RLVQLLG GDSFEE+ELGARSGCNGCEGCESGFYSKIVGLKGPKCGKE ERLNGWIQY W
Sbjct: 128 RLVQLLGFGDSFEEKELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFW 187

Query: 184 NGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
            GGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA
Sbjct: 188 TGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 239

[Close]

BLAST of Cp4.1LG20g05130 vs. ExPASy TrEMBL
Match: A0A6J1END4 (uncharacterized protein LOC111434155 OS=Cucurbita moschata OX=3662 GN=LOC111434155 PE=4 SV=1)

HSP 1 Score: 438 bits (1127), Expect = 7.92e-155
Identity = 221/232 (95.26%), Postives = 224/232 (96.55%), Query Frame = 0


Query: 4   PPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSA 63
           PPPPPPP PSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSS 
Sbjct: 6   PPPPPPPAPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSV 65

Query: 64  EESMSTPMYLHLPQTNTASSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQSRPVDDIQ 123
           EES+STPMYLHLPQTNT SSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQ+RPVDDIQ
Sbjct: 66  EESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDLKSESNSPNLIDCGQNRPVDDIQ 125

Query: 124 RLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQYLW 183
           RLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKE ERLNGWI Y W
Sbjct: 126 RLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIHYFW 185

Query: 184 NGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
            GGGEAERLEPLRLAYLLMGKAVFASNG D+CLEGLEFPSTVEDFLLNDPPA
Sbjct: 186 TGGGEAERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA 237

[Close]

BLAST of Cp4.1LG20g05130 vs. ExPASy TrEMBL
Match: A0A5A7UHE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00360 PE=4 SV=1)

HSP 1 Score: 334 bits (856), Expect = 1.57e-113
Identity = 175/236 (74.15%), Postives = 196/236 (83.05%), Query Frame = 0


Query: 6   PPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSAEE 65
           PPPPPPP +SLHS FFSSLKQVEKRLKLD+ SQRD L PP P     +PV+ ++SSS EE
Sbjct: 7   PPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----VPVQTNASSSTEE 66

Query: 66  SM-STPMYLHLPQTNTASSLQESSEPPPEFLSNSSDL-----KSESNSPNLIDCGQSRPV 125
            + STPMYLH PQTNT+S+LQESS+PP EFLSN S       KS SN PNLID GQ+R +
Sbjct: 67  DLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVSNPPNLIDRGQNRDL 126

Query: 126 DDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWI 185
           DDIQRL+QLLGL DS +E+ELG + GCNGCEGCESGFYSKIVGLKGPKC KE ERLNGWI
Sbjct: 127 DDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWI 186

Query: 186 QYLWNGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
           ++  NGGGE +RLEPLRLAYLL+GKAVFASNG D CL+GLEFPSTVEDFLLNDPPA
Sbjct: 187 EFFSNGGGEEDRLEPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA 237

[Close]

BLAST of Cp4.1LG20g05130 vs. ExPASy TrEMBL
Match: A0A1S3B9V1 (uncharacterized protein LOC103487596 OS=Cucumis melo OX=3656 GN=LOC103487596 PE=4 SV=1)

HSP 1 Score: 334 bits (856), Expect = 1.57e-113
Identity = 175/236 (74.15%), Postives = 196/236 (83.05%), Query Frame = 0


Query: 6   PPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSAEE 65
           PPPPPPP +SLHS FFSSLKQVEKRLKLD+ SQRD L PP P     +PV+ ++SSS EE
Sbjct: 7   PPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----VPVQTNASSSTEE 66

Query: 66  SM-STPMYLHLPQTNTASSLQESSEPPPEFLSNSSDL-----KSESNSPNLIDCGQSRPV 125
            + STPMYLH PQTNT+S+LQESS+PP EFLSN S       KS SN PNLID GQ+R +
Sbjct: 67  DLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVSNPPNLIDRGQNRDL 126

Query: 126 DDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWI 185
           DDIQRL+QLLGL DS +E+ELG + GCNGCEGCESGFYSKIVGLKGPKC KE ERLNGWI
Sbjct: 127 DDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWI 186

Query: 186 QYLWNGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
           ++  NGGGE +RLEPLRLAYLL+GKAVFASNG D CL+GLEFPSTVEDFLLNDPPA
Sbjct: 187 EFFSNGGGEEDRLEPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPA 237

[Close]

BLAST of Cp4.1LG20g05130 vs. ExPASy TrEMBL
Match: A0A0A0LUG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G445870 PE=4 SV=1)

HSP 1 Score: 325 bits (834), Expect = 2.74e-110
Identity = 169/230 (73.48%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 11  PPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSAEESMSTP 70
           PP +SLHS+FFSSLKQVEKRLKLD+ SQRD L PP P     LPV  +SSS+ E+S+STP
Sbjct: 6   PPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----LPVRTNSSSTEEDSLSTP 65

Query: 71  MYLHLPQTNTASSLQESSEPPPEFLSNSSDL-----KSESNSPNLIDCGQSRPVDDIQRL 130
           MYLH PQTNT+S+LQESS+ P EFLS+SS       KSESN P  ID GQ+R VDDIQRL
Sbjct: 66  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 125

Query: 131 VQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEAERLNGWIQYLWNG 190
           +QLLGL DS +E+E GA++GCNGCEGCESGFYSKIVGLKGPKC KE ERLNGWI++  NG
Sbjct: 126 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 185

Query: 191 GGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 235
           G E +RLEPLRLAYLL+GKAVFASN  D CLEGLEFPSTVEDFLLNDPPA
Sbjct: 186 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA 230

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g05130 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g05130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519908.1	3.08e-164	100.00	uncharacterized protein LOC111783234 [Cucurbita pepo subsp. pepo] >XP_023519909....	[more]
XP_023001462.1	2.61e-156	96.12	uncharacterized protein LOC111495590 [Cucurbita maxima] >XP_023001463.1 uncharac...	[more]
KAG7019524.1	1.07e-154	95.65	hypothetical protein SDJN02_18485 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927255.1	1.64e-154	95.26	uncharacterized protein LOC111434155 [Cucurbita moschata] >XP_022927256.1 unchar...	[more]
KAG6583907.1	3.58e-153	95.22	hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG20g05130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGL6	1.26e-156	96.12	uncharacterized protein LOC111495590 OS=Cucurbita maxima OX=3661 GN=LOC111495590...	[more]
A0A6J1END4	7.92e-155	95.26	uncharacterized protein LOC111434155 OS=Cucurbita moschata OX=3662 GN=LOC1114341...	[more]
A0A5A7UHE6	1.57e-113	74.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B9V1	1.57e-113	74.15	uncharacterized protein LOC103487596 OS=Cucumis melo OX=3656 GN=LOC103487596 PE=...	[more]
A0A0A0LUG6	2.74e-110	73.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G445870 PE=4 SV=1	[more]

BLAST of Cp4.1LG20g05130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..113
None	No IPR available	SUPERFAMILY	101447	Formin homology 2 domain (FH2 domain)	coord: 2..12

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g05130.1	Cp4.1LG20g05130.1	mRNA