Cp4.1LG20g04860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g04860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Protein of unknown function, DUF584
Location	Cp4.1LG20: 2825367 .. 2825912 (+)
RNA-Seq Expression	Cp4.1LG20g04860
Synteny	Cp4.1LG20g04860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGCTCAGTACGACTCGGAGCCGAGCCGAGTCTGCTCCGATTCCCTCTCTATAAATACTGGCCCCTTCATCTTCGCCTTTCTACTGTTCCATTTCTCTTCACTTCAATCGTATATGGCCGAAGAATTCCAGGAATCCGAAGTGATTTTCTCCGATCTCGACCACCGCCGTTACCTCCACCGTGCCGACGACGACGATTGCGGCGAGGATTTCTTTAACTTCAACGGCCGCGGAGGAATGGTTGTAGCGCCGCGAAATAAGTATCAACAGCGGACGGTGCGCGATGGTGGACGGCTGTCGAAGAAGGTAATGGCGAGTTCGCTTCCGGTAGGGATTCCGGAAAGAAACCGACGGAGGACGACGGAGGAAGAGGATGAAATGGACGAAGAGGAAATGATTCCGCCGCATGTGGTGGCGGAGAGGCGAATGGCAGGGAAAATGGCGTTCTCTGTTTGTACTGGGAATGGAAGGACGCTGAAAGGACGAGATTTGAGACGAGTAAGGAATTCGATCCTTCGGATGACCGGATTCTTAGAAACGTGA

mRNA sequence

ATGTGTGCTCAGTACGACTCGGAGCCGAGCCGAGTCTGCTCCGATTCCCTCTCTATAAATACTGGCCCCTTCATCTTCGCCTTTCTACTGTTCCATTTCTCTTCACTTCAATCGTATATGGCCGAAGAATTCCAGGAATCCGAAGTGATTTTCTCCGATCTCGACCACCGCCGTTACCTCCACCGTGCCGACGACGACGATTGCGGCGAGGATTTCTTTAACTTCAACGGCCGCGGAGGAATGGTTGTAGCGCCGCGAAATAAGTATCAACAGCGGACGGTGCGCGATGGTGGACGGCTGTCGAAGAAGGTAATGGCGAGTTCGCTTCCGGTAGGGATTCCGGAAAGAAACCGACGGAGGACGACGGAGGAAGAGGATGAAATGGACGAAGAGGAAATGATTCCGCCGCATGTGGTGGCGGAGAGGCGAATGGCAGGGAAAATGGCGTTCTCTGTTTGTACTGGGAATGGAAGGACGCTGAAAGGACGAGATTTGAGACGAGTAAGGAATTCGATCCTTCGGATGACCGGATTCTTAGAAACGTGA

Coding sequence (CDS)

ATGTGTGCTCAGTACGACTCGGAGCCGAGCCGAGTCTGCTCCGATTCCCTCTCTATAAATACTGGCCCCTTCATCTTCGCCTTTCTACTGTTCCATTTCTCTTCACTTCAATCGTATATGGCCGAAGAATTCCAGGAATCCGAAGTGATTTTCTCCGATCTCGACCACCGCCGTTACCTCCACCGTGCCGACGACGACGATTGCGGCGAGGATTTCTTTAACTTCAACGGCCGCGGAGGAATGGTTGTAGCGCCGCGAAATAAGTATCAACAGCGGACGGTGCGCGATGGTGGACGGCTGTCGAAGAAGGTAATGGCGAGTTCGCTTCCGGTAGGGATTCCGGAAAGAAACCGACGGAGGACGACGGAGGAAGAGGATGAAATGGACGAAGAGGAAATGATTCCGCCGCATGTGGTGGCGGAGAGGCGAATGGCAGGGAAAATGGCGTTCTCTGTTTGTACTGGGAATGGAAGGACGCTGAAAGGACGAGATTTGAGACGAGTAAGGAATTCGATCCTTCGGATGACCGGATTCTTAGAAACGTGA

Protein sequence

MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

Homology

[Close]

BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_022927118.1 (uncharacterized protein LOC111434057 [Cucurbita moschata] >KAG6583932.1 hypothetical protein SDJN03_19864, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019547.1 hypothetical protein SDJN02_18508, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (919), Expect = 1.27e-124
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYL 60
           MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYL
Sbjct: 1   MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYL 60

Query: 61  HRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRR 120
           HRADDDDCGEDFFN N RGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRR
Sbjct: 61  HRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRR 120

Query: 121 TTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE 180
           TTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE
Sbjct: 121 TTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE 180

[Close]

BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_023520036.1 (uncharacterized protein LOC111783341 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286 bits (732), Expect = 1.06e-96
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR 99
           MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR
Sbjct: 1   MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR 60

Query: 100 LSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT 159
           LSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT
Sbjct: 61  LSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT 120

Query: 160 LKGRDLRRVRNSILRMTGFLET 181
           LKGRDLRRVRNSILRMTGFLET
Sbjct: 121 LKGRDLRRVRNSILRMTGFLET 142

[Close]

BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_023001484.1 (uncharacterized protein LOC111495606 [Cucurbita maxima])

HSP 1 Score: 272 bits (696), Expect = 3.27e-91
Identity = 136/142 (95.77%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR 99
           MAEEFQESEVIFSDLDH RYLH ADDDDCGEDFFNFN RGGMVV PRNKYQQRTVRDGGR
Sbjct: 1   MAEEFQESEVIFSDLDHCRYLHGADDDDCGEDFFNFNCRGGMVVTPRNKYQQRTVRDGGR 60

Query: 100 LSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT 159
           +SKKVMASSLPVGIPERNRRRTTEEEDE DEEEMIPPHVVAERRMAGKMAFSVCTGNGRT
Sbjct: 61  MSKKVMASSLPVGIPERNRRRTTEEEDETDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT 120

Query: 160 LKGRDLRRVRNSILRMTGFLET 181
           LKGRDLRRVRNSILRMTGFLET
Sbjct: 121 LKGRDLRRVRNSILRMTGFLET 142

[Close]

BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_038895158.1 (uncharacterized protein LOC120083461 [Benincasa hispida])

HSP 1 Score: 212 bits (539), Expect = 2.58e-67
Identity = 110/142 (77.46%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR 99
           MAEEFQES+VIFSD  H RYL R DDDD G DFFNFN R G+V APR KY  RT+RDGGR
Sbjct: 1   MAEEFQESDVIFSDSYHCRYLCR-DDDDYGNDFFNFNSRRGIVAAPRIKYHHRTMRDGGR 60

Query: 100 LSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT 159
           LSKK +A SLPV IPER  RR ++E+DEMD EE++PPH+VAERR+AGKMAFSVCTGNGRT
Sbjct: 61  LSKKEIARSLPVRIPERISRRISDEDDEMDGEEIVPPHLVAERRVAGKMAFSVCTGNGRT 120

Query: 160 LKGRDLRRVRNSILRMTGFLET 181
           LKGRDL RVRNSILRMTGFLET
Sbjct: 121 LKGRDLSRVRNSILRMTGFLET 141

[Close]

BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_023541188.1 (uncharacterized protein LOC111801423 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199 bits (507), Expect = 2.10e-62
Identity = 109/144 (75.69%), Postives = 115/144 (79.86%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCG-EDFFNFNGRGGMVVAPRN-KYQQRTVRDG 99
           MAEEFQESEVIFSD D  RYLHR D    G ED  NFN R GM  APR+ KY  RTVR+G
Sbjct: 1   MAEEFQESEVIFSDRDRCRYLHREDGGGFGGEDHLNFNCRRGMAAAPRSCKYHNRTVREG 60

Query: 100 GRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNG 159
           G  S K MASSLPVGIP+   RR  EE+DEMDEEEM+PPHVVAERR+A KMAFSVCTGNG
Sbjct: 61  GWQSNKEMASSLPVGIPDIIGRRMAEEDDEMDEEEMVPPHVVAERRVARKMAFSVCTGNG 120

Query: 160 RTLKGRDLRRVRNSILRMTGFLET 181
           RTLKGRDL RVRNSILRMTGFLET
Sbjct: 121 RTLKGRDLSRVRNSILRMTGFLET 144

[Close]

BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A6J1EK43 (uncharacterized protein LOC111434057 OS=Cucurbita moschata OX=3662 GN=LOC111434057 PE=4 SV=1)

HSP 1 Score: 358 bits (919), Expect = 6.14e-125
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYL 60
           MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYL
Sbjct: 1   MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYL 60

Query: 61  HRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRR 120
           HRADDDDCGEDFFN N RGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRR
Sbjct: 61  HRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRR 120

Query: 121 TTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE 180
           TTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE
Sbjct: 121 TTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE 180

[Close]

BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A6J1KMV6 (uncharacterized protein LOC111495606 OS=Cucurbita maxima OX=3661 GN=LOC111495606 PE=4 SV=1)

HSP 1 Score: 272 bits (696), Expect = 1.58e-91
Identity = 136/142 (95.77%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR 99
           MAEEFQESEVIFSDLDH RYLH ADDDDCGEDFFNFN RGGMVV PRNKYQQRTVRDGGR
Sbjct: 1   MAEEFQESEVIFSDLDHCRYLHGADDDDCGEDFFNFNCRGGMVVTPRNKYQQRTVRDGGR 60

Query: 100 LSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT 159
           +SKKVMASSLPVGIPERNRRRTTEEEDE DEEEMIPPHVVAERRMAGKMAFSVCTGNGRT
Sbjct: 61  MSKKVMASSLPVGIPERNRRRTTEEEDETDEEEMIPPHVVAERRMAGKMAFSVCTGNGRT 120

Query: 160 LKGRDLRRVRNSILRMTGFLET 181
           LKGRDLRRVRNSILRMTGFLET
Sbjct: 121 LKGRDLRRVRNSILRMTGFLET 142

[Close]

BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A6J1GT17 (uncharacterized protein LOC111457175 OS=Cucurbita moschata OX=3662 GN=LOC111457175 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 1.02e-62
Identity = 109/144 (75.69%), Postives = 115/144 (79.86%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCG-EDFFNFNGRGGMVVAPRN-KYQQRTVRDG 99
           MAEEFQESEVIFSD D  RYLHR D    G ED  NFN R GM  APR+ KY  RTVR+G
Sbjct: 1   MAEEFQESEVIFSDRDRCRYLHREDGGGFGGEDHLNFNCRRGMAAAPRSCKYHNRTVREG 60

Query: 100 GRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNG 159
           G  S K MASSLPVGIP+   RR  EE+DEMDEEEM+PPHVVAERR+A KMAFSVCTGNG
Sbjct: 61  GWQSNKEMASSLPVGIPDIIGRRMVEEDDEMDEEEMVPPHVVAERRVARKMAFSVCTGNG 120

Query: 160 RTLKGRDLRRVRNSILRMTGFLET 181
           RTLKGRDL RVRNSILRMTGFLET
Sbjct: 121 RTLKGRDLSRVRNSILRMTGFLET 144

[Close]

BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A6J1K0L5 (uncharacterized protein LOC111490497 OS=Cucurbita maxima OX=3661 GN=LOC111490497 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 1.18e-61
Identity = 108/144 (75.00%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCG-EDFFNFNGRGGMVVAPRN-KYQQRTVRDG 99
           MAEEFQESEVIFSD D  RYLHR D    G ED  NFN R GM  APR+ KY  RTVR+G
Sbjct: 1   MAEEFQESEVIFSDRDRCRYLHREDGGGFGGEDHLNFNCRRGMAAAPRSCKYHNRTVREG 60

Query: 100 GRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNG 159
           G  S K MASSLPVGIP+   RR  EE+DEMD EEM+PPHVVAERR+A KMAFSVCTGNG
Sbjct: 61  GWQSNKEMASSLPVGIPDIIGRRMAEEDDEMDGEEMVPPHVVAERRVARKMAFSVCTGNG 120

Query: 160 RTLKGRDLRRVRNSILRMTGFLET 181
           RTLKGRDL RVRNSILRMTGFLET
Sbjct: 121 RTLKGRDLSRVRNSILRMTGFLET 144

[Close]

BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A1S3B8R0 (uncharacterized protein LOC103487260 OS=Cucumis melo OX=3656 GN=LOC103487260 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 1.02e-59
Identity = 108/146 (73.97%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDL-DHRRYLHRADDDDCGEDFFNFNGRGGMVVAP-RNKYQQRT-VRD 99
           MAEEFQESEVIFSDL DH RYL R DDD     FFNFN R G+++AP R KY  RT +RD
Sbjct: 1   MAEEFQESEVIFSDLRDHTRYLRRDDDD-----FFNFNSRRGIILAPPRTKYHHRTTMRD 60

Query: 100 GG-RLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTG 159
           G  RLSKK +A SLPV IPER+  RT EE+D+MDEEE+IPPH+V ERR+A KMAFSVCTG
Sbjct: 61  GCVRLSKKEIARSLPVRIPERSLHRTAEEDDDMDEEEIIPPHLVTERRVARKMAFSVCTG 120

Query: 160 NGRTLKGRDLRRVRNSILRMTGFLET 181
           NGRTLKGRDL RVRNSILRMTGFLET
Sbjct: 121 NGRTLKGRDLSRVRNSILRMTGFLET 141

[Close]

BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT2G34340.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-23
Identity = 71/150 (47.33%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR 99
           MAEEF ESEV+FSD      LH+ +++            G  +   + +  +RT  +   
Sbjct: 1   MAEEFDESEVVFSD-GLSSVLHKENENRL---------FGSDMERKKTRRIKRTTTE--- 60

Query: 100 LSKKVMASSLPVGIPER-NRRRTTEEEDEMDEE-------EMIPPHVVAERRM-AGKMAF 159
             K  ++SSLPV IPE   RR   +EEDE  EE       EMIPPH++  RR+  G+MAF
Sbjct: 61  --KASLSSSLPVSIPENIFRRYVGKEEDEYSEEEYSEGGGEMIPPHIMIGRRIQGGQMAF 120

Query: 160 SVCTGNGRTLKGRDLRRVRNSILRMTGFLE 181
           SVC+G+GRTLKGRDL RVRNS+LR+TGFLE
Sbjct: 121 SVCSGSGRTLKGRDLSRVRNSVLRLTGFLE 135

[Close]

BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT1G29640.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 101.7 bits (252), Expect = 6.5e-22
Identity = 71/146 (48.63%), Postives = 92/146 (63.01%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDF--FNFNGRGGMVVAPRNKYQQRTVRDG 99
           M+EEF ESE+IFS  D+   + R +D +  E+    +F      V    NK  +R+    
Sbjct: 1   MSEEFDESEIIFS--DNYFPIRRREDGNEKENNRPVDFRENSERV---WNKSSRRSKTTP 60

Query: 100 GRLSKKVMASSLPVGIPERNRRRTTEEE--DEMDEEEMIPPHVVAERRM-AGKMAFSVCT 159
              +    +SSLPV IP   RR +TEEE  D+    +MIPPH++  RRM  G+MAFSVCT
Sbjct: 61  LPSAVTAFSSSLPVNIP--MRRYSTEEEYSDDDGGRKMIPPHLIVGRRMEGGQMAFSVCT 120

Query: 160 GNGRTLKGRDLRRVRNSILRMTGFLE 181
           GNGRTLKGRDL RVRNS+L++TGFLE
Sbjct: 121 GNGRTLKGRDLSRVRNSVLKLTGFLE 139

[Close]

BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT5G45630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-15
Identity = 59/145 (40.69%), Postives = 75/145 (51.72%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR 99
           M+EEFQES++IFSD                +   + + R   +   RN  ++ T R    
Sbjct: 1   MSEEFQESDIIFSD----------------QSKISTSSRYTKLYNSRNDEKKGTRR---- 60

Query: 100 LSKKVMASSLPVGIPERNRR----RTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTG 159
              +    + PV IP  N R     TTEEED     +  PPHV+ ERRM  ++AFS C  
Sbjct: 61  --HETAEKTSPVRIPTNNFRCLEWDTTEEED-----DKTPPHVIIERRMKEQIAFSAC-- 113

Query: 160 NGRTLKGRDLRRVRNSILRMTGFLE 181
              TLKGRDL R RNS+LRMTGFLE
Sbjct: 121 ---TLKGRDLSRHRNSVLRMTGFLE 113

[Close]

BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT4G18980.1 (AtS40-3 )

HSP 1 Score: 78.6 bits (192), Expect = 5.9e-15
Identity = 60/142 (42.25%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 40  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGR 99
           M+EEFQESEVIFSD                E F   + +    ++  N+  +R   +  +
Sbjct: 1   MSEEFQESEVIFSD----------------ESFTRKDNK----ISHNNENYERKSTEKDK 60

Query: 100 LSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAE-RRMAGKMAFSVCTGNGR 159
           +S        PV IP R   R TEEE      EM PPHV+ E RR   +MAFS C     
Sbjct: 61  ISS-------PVRIPSRTTIRYTEEEG-----EMTPPHVIIEKRRTEAQMAFSFC----- 105

Query: 160 TLKGRDLRRVRNSILRMTGFLE 181
           TLKGRDL R RN++LRMTGFLE
Sbjct: 121 TLKGRDLSRHRNTVLRMTGFLE 105

[Close]

BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 65.5 bits (158), Expect = 5.1e-11
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 92  RTVRDGGRLSKKVMASSLPVGIPERNR-----RRTTEEE------DEMDEEEMIPPHVVA 151
           R +  G  +S     SS P+ IP+ ++     ++ T         D+ DE  M+PPH + 
Sbjct: 44  RYIPKGNEVSGGAKQSSAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEGSMVPPHELV 103

Query: 152 ERRMAGKM--AFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET 182
            +R+A     +FS+C G GRTLKGRDL + RN++L  TGFLE+
Sbjct: 104 AKRLARTQISSFSMCEGIGRTLKGRDLSKTRNAVLTRTGFLES 146

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g04860 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g04860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927118.1	1.27e-124	98.90	uncharacterized protein LOC111434057 [Cucurbita moschata] >KAG6583932.1 hypothet...	[more]
XP_023520036.1	1.06e-96	100.00	uncharacterized protein LOC111783341 [Cucurbita pepo subsp. pepo]	[more]
XP_023001484.1	3.27e-91	95.77	uncharacterized protein LOC111495606 [Cucurbita maxima]	[more]
XP_038895158.1	2.58e-67	77.46	uncharacterized protein LOC120083461 [Benincasa hispida]	[more]
XP_023541188.1	2.10e-62	75.69	uncharacterized protein LOC111801423 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK43	6.14e-125	98.90	uncharacterized protein LOC111434057 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A6J1KMV6	1.58e-91	95.77	uncharacterized protein LOC111495606 OS=Cucurbita maxima OX=3661 GN=LOC111495606...	[more]
A0A6J1GT17	1.02e-62	75.69	uncharacterized protein LOC111457175 OS=Cucurbita moschata OX=3662 GN=LOC1114571...	[more]
A0A6J1K0L5	1.18e-61	75.00	uncharacterized protein LOC111490497 OS=Cucurbita maxima OX=3661 GN=LOC111490497...	[more]
A0A1S3B8R0	1.02e-59	73.97	uncharacterized protein LOC103487260 OS=Cucumis melo OX=3656 GN=LOC103487260 PE=...	[more]

BLAST of Cp4.1LG20g04860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34340.1	5.8e-23	47.33	Protein of unknown function, DUF584	[more]
AT1G29640.1	6.5e-22	48.63	Protein of unknown function, DUF584	[more]
AT5G45630.1	3.4e-15	40.69	Protein of unknown function, DUF584	[more]
AT4G18980.1	5.9e-15	42.25	AtS40-3	[more]
AT4G21970.1	5.1e-11	37.86	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 86..180 e-value: 7.2E-28 score: 98.5
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 40..180
None	No IPR available	PANTHER	PTHR33083:SF49	OS01G0748300 PROTEIN	coord: 40..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g04860.1	Cp4.1LG20g04860.1	mRNA