Cp4.1LG20g04230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g04230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	trafficking protein particle complex subunit 13
Location	Cp4.1LG20: 2451834 .. 2458234 (+)
RNA-Seq Expression	Cp4.1LG20g04230
Synteny	Cp4.1LG20g04230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACTGTAGAAATTAAAATATACAAAATAATAAAAAATAAAGACATAGGTCCATCTGTCCAATTATTCAGAAATTTAAATATATTTCAGGTAAATTTATAAATTTTGGAAGATGGAAAATTAAGGTGAAAATTACCGGTAGGTTCATATATTTAACCTAAAAAAAAAAAGTTGAGGGATACGATGAATCGACTAGGGAATTGTCTGACAGTTGCATAAGGAGGGTCGACATGTCGTCATTTTTGGATTGGTCTCAACTCCATTGCTGAGATTTCGCGCCGGGCTTTCTGACAACTTCAGTTACTTCCCATTCTCTTTGCGATTCTGTGTTCCACAGAGAACAAGCAAGATGAACGGTGCTCAGGGATCGCATTCACTGGCCTTCAGGGTGATGAGGCTCTGTAGGCCGTCATTTCAAGTTGATTCTCCTCTCCGCTTCGATCCGGTCGATTTAGTCGCTGGCGAGGACATTTTTGACGACCCTGTGGCTGCTCGCCAACTCCCTCGTCTCCTTGAAGCCCAATTGTCCGACGAATCCGATTCCGATCCCAGCTACAGTTCCAGATTCCTTCTTCATGACTCCTCGGATGCTATGGGCCTCACTGGTCTCCTCGTACTCCCTCAAGCTTTCGGGTTTTTCTCTATTTCTCTGCCCCTTTCTTCTTTCATTCTGTGGATGAATTGATCTATTCGGATCTTTCTTTTGTTCATTGTTGGGGGCATGAATGGTGACCATCTTCCAGGGCGATTTATTTAGGCGAGACTTTCTGTAGCTATATCAGTGTGAATAATAGCTCCGATTTTGAAGTCAGGGACGTTATTATCAAGGTCGGTGTTCCTTCCTTTTAGGCGTTAGGAGTGTTTTCCTTTTATAACTTAGAGAAATTGGCCTGCTTCATCCACTCTGATTTGTGGTAGACGAGCTTTCCGTACAGGCAGAAATTCAAACGGAGAGGCAGAGAATCCTTCTTCTGGATTCATCAAAATCCCCTGTTGAAACTATACGTGCTGGGGGTCGTTACGACTTCATTGTCGAACACGATGTGAAGGAACTCGGAAGTCACACGTAAGAATCTCCTTGTTAGTTAAGTGAGAATCTCCTTGTTAGTTAAGTACGTATAAGTGATGCTTTATTTCATTCTTATAGGCTAGTCTGCACCGCATTGTACAATGATGGTGATGGTGAGCGTAAATATCTACCACAGTTTTTCAAGTTCATGGTTGCGAATCCACTCTCGGTCAGAACAAAGGTAATATGCTCTTCGGATCCTACAATTGCAGACACACAACTATTATTATACGGACATCTTTGCTTCAGTGGCCCTTTTCATTTCCCCTTCTATGAATTTTATGAAAGCTTTCAGTGGCTTTGGTTGCTTAGTTCTGGATTAATATCTGATATTTTTCAAATTACTTCATCTGCAGGTCCGTGTTGTGAAGGTATGTTTTGCTGACTAAAAGCAGTCAACGTAAGTTTAGAAAATGTCTCATAACTATCGTAGTTGACGTATATCTATTGCTTTTATATATCATAGTAAAGCTTTGAATTCGATTATAGCATATTGTTTTACATCCTAAAAGTATTCCTTTTTATCTTGGTTCTCTGAAATCCCTCTTTCTTCTTTAATATTTTGTAGGACGACTTGTGTTGATATAGCACAGTACTCTCAGCTCCTACTCAGTAGTTGTCTATTCTATGACCCTATAGTTATGCTGGATTCTAGATCTTGGTCGTATAAAGAATTAGTAGTGTTGCCACGTACTTTTCGATGCCACTGTACTTTTCGATTCCAGTTTTCCCGTGTTTGAAATTTTCATTAAGATAGCACTTCCTTGGTGAAAGCTATCAAATGATAGTTTTCTTTCTATCTCAGGAGAGTACATTCTTAGAAGCTTGCATTGAAAACCATACAAAATCAAATCTATTAATGGACCAAGTTGATTTTGAGCCTTCCCCAAACTGGAATGCAGTGATAATCAATGCTGATGAACATCACTCTGAACTTAAATCTACAACAAGGTATTGATCATTTGTCAATTCAGTGATATTAAATAATTGATAATCGTGCTAATTCATGCCTTGAATTTACCGTCATGGTTAGTTATTTTTCTATTTATTTTTTCCCTCATGGTCAAGCTTATGTTAATTTTTATGCTGCAGAGAGGTATTCAAGCCTCCTATATTGGTCAGATCAGGTGGAGGAATCCATAATTTTCTTTATCAATTGAAATTTTCAACGCATGGTTCTTCTCCTCGGAAAGTTGAGGGAAGTAATATTCTTGGTAAACTTCAGTTAACATGGCGTACAAATATGGGTGAACCTGGACGGCTACAAACACAACAGATTTTGGGTTCTGTGAGTGCTTATCATCATATAATAATTTAAAAATAAATTCAATTATATGGATTTTTGTTGTTTTTGGTTATTGGTAAGCTACCTCTTGCGTGCTGCAGAGGAATTATCTTCGCTTTATCAATTGACTACTGCCTATGGAATGTTAAGTTTTAAACCGTGTTAAAATTCTGGTATCCATTCTGTAAGTTGTGGAAATGGTTTCCAATTGTGACACGATTCTTTTGTTTTGCAGCTTCTGAAATTTTTACTGACGCCTGTTTATCACATGATTTCAAGATTTTTTATTTCAGTTAAACCTTGCTTTGATCTTACACTTTTATTACCCTGCGGTCCCTGTCTAATGCCTCAGATGAATCCTGAAAGATGGTTGTTAAGTGCATGGAAGATTGTTTACTGAGTATAAAATCATATTTAGAACATAGTTATGCGTAGGCTGAACACTGAATTTTTTCGTATAGAGAAAAAATATTAGAAATTTTAAACTATGGATGCTCAAAAAAATGATGTTGATGTCATCTATTAGCTACATGTTATTATAGCTTGTGTGTTTACATGATATGTTTTGCAAATGCTATAAATCAGTACTTTTTACCTTATTTAAGAACTAAATTTACCTTAATTTGAACTTAAGCTTTTGAGTTTAGTGATGATTTAATATAGTATGAGCTGATTCAGATTGTGTGACTGCAAATAAATTATTAAAGAATTTATACTTTGTTTGTTGACATTTGCTCCTCAAAAAACTATAGCTAGAGCTAATATGTGCCATAAACCCAAAGGGGATGCATTTATATTAGATAAAAAGTAAAGCAGGCTCTGTCTATAACTCTAATATATTGTTGTTGAAGTGTTGACTAAATTTATCATAACTCATTAGCTTTAAGTTTTTAGATTCAGCATAATCAAAATTAAAAGTAGGAGGAGGTCGTGTGTTCGAATGTTCTTATCATTTCCTCCCCTATTGACTTGTTGGCTTTTGTGCTAATTTCTAAGTCTACAGAGGGAGAGTGTTAAGAAATTAAATTTTTATAACCCATCAACTTAGAACTTTTGAGCTCAAGGGTGATTTGATGTATTATTATGATTTTGAGATTTATTAGCCGATATTTCTCTCATTGGTCATTTATGTTGTTTTGCAGCCCATTATTCGCAAGGAGCTTGAGCTTCATGTTGTTGAGATGCCAGATGTTATCAGATTGGAGAGGCCTTTTACTGTAATTTCTCTTTTGTTATTGTGTTCTTCTGAAAAGTTCATCTAGAAAGTTGGATAAGATTAAAATTATTTAGTCATTTTCCAACGAGGTTGGAATCCATCTTTAATTCTGCCTCTTAATCTCTTGAGGATTATACATATCTTCTAATCTCTTTTCCCAGAGAGAATATTTTGGAATTGATTGATTTATTGCTTCTCCAGTTACATATGCGTCTCACAACACAGATTGAGAGGGAATTGGGCCCTTTTGAGGTTTGGATGTCACAAAATGGTTCAGATGAGGAAAAAGTTGTTATGGTTAATGGTCTACAGACAATGGTATGTTCACTCATCCTGTCTTAATCATCGTATCAAATCCTTTTATCAGAATTCATCTTTTCTGGTAATTCGTGTATTAGAATCTGGTGTAATTTCGTTTGGTGTGCCTATACCAATCCAATTGCCACGAACATAAGTATCTTTTCTAGTTTAACTTGTGTTTAGATACTTATGTTCAATATATGGGAACTTTCGCACTGCAATGCTAACCAATTAATTTGTTTCTTAATTCTGTGGAATGGTGAGGGATGGCATGTTGAAAGGTTGCCGAAACCAGAACTTTGAATTAGAACTTTATGCATCCATTTTATAAATGTGTTTCTCATTTTTGTACATGTAATTTTCAACAGGTCATACCAAGAGTTGAGCCACATGGTTCCACAGATTTCCACCTGGTATGAACAACAAATATATATAATGGGTTGTGATACGAGTTAGTCTGCAAGTGATTGCATTTCATTAAATAACAAAATTCTTCATTTATTGTACCATTCTATGCATGTGAGCGTCTTGGAGAGTTGGACCTTGTTTTGATGACGCTTAGTCGACACCCACCTTTATATTTTCTTTGGGCGTACATTTTATTTTTAAAAAAATTATATTGCCAAAAAAGTTGCTGTCTATCCTCTATTGCACATCATAATTAGACATTAGCTCTAATTAAAGCATGCAACTTGTTTGTTTCTTTCGTGATGAATTAAACACAAAATACATGCATTGAAAATGGTGTCCTATAGAGTAGAAAGCATTAAATCTCCATCATATTGACAATATTTAACTTCTTTTGTTCAACCAGAACCTCATTGCCACTAAACCCGGAGTTCAGAGAATCGCAGGCATTAAAGTCTTCGACACAAGGGAGAAGAAATCCTATGACCACCCTTTGCCAGATCTAGAGGTTCAAATTCTTCTTATTTATTTGATAGCAGCATTTTGATTTCCTTGCATGTGAATGTAAGATCTTGTCTGGGCACGTTTGCAGTTTCTATATTAGGTGTCTCTCGTTGAGAGATACCTATTATTGGTAAAATACTCTGAATGAATTGGATTAGATGTCAACTAGGGAGCATGGATGCTATTCGACTAGTGTCCGTGTTGGACGCGTGAAAGCACATTATTTGGAGTGTTCTTTTCATTTTATTAACTTTGGACATGCAGAGGAGACACGTAGGGGATGTGTAAGGGCACAATCAAGAACGTACTGTGCGGAGAAAATAAGAAAGAAATTGAAAAGTGATGGTTCTTTTTTGGAACTGCAGTAAATAAAATAAGAAAACAAAAAGGTTTTGAAACTATATAAACGAAAATAGATAATTTCACTTGATTAACGTCAATAGTGATGGTTCTTTTTTGGAGTTGCAAGTTTTCCTTTAGGGGAGAAACTTTTTGTTTTGTGGAACACTTGAATTTCTTCTTTTGTTTGACAGTATCTTATCCTTACTTAAAGAGCTGAGATATACTTTATGGCATTTAAATTTACTTAAATCAAATTGATAAGGATTAAAGTTAGATGTATACTTTTTTTTCACCACATAATTCACTATATTTCAAAGCATTTATAATATGCGTAAAAGTATATGAAGTAATTATCAATGATACATTTTATTGTACATCTTTTGGTCCTGTTCTTTTACTGTTCTTAGGAAATGACTTGTCCCCCTATTTCTGCTTCTTAGGATGGACCTCTAAGATCCCTTACATAATTTAGTGTTTGTGCCGGCACTATAATTTACATAATGCTCCGGAATGTTGTGTATTTTCTAATGCTTGGATGTCTCATATATGTGAAAATATGAAAGAAAGGTATTCTATTGCTGGAAAGTTTTCCCAATATTTGAGGGGTTTTCTACTGTTTCTGATTAAACCTTGTAATCTAATTCATTTCCTCGTTTTGATCGAGGAACGTTATTCAAATTATGAAGTATAAACCTTCACTGCCAAACTCATGAAATCCATTTTTGGCTGCAGATTTATGTCGATCTGGAATGAACGTCTCGACTCGACTGATTTGGTCTTGACAAGACTCTTCACTTCCTGCATTGTTTAGGACACTAAGATGTAAACATCCCATGACCTGCATCATTCCTGGAATTCAGCAGCCTCATGGAACCAACGATCAAGCCCGACACTCGTTCTCAAGCGTGCGCTCAATAGAGACGCTCTTATTAGATGCCTACGGTACTCCATTCTCATTCTTTGGTTAGATTATTGCAAAAATGGTTTGTCCTTCAGGGCAGAAGGAAGCAACTGGGTAGCAATATGGACCCCTCCTTGGCCTTGTTTTTCAAATGCGATGGAGTAACAGAAGAGGGAAATGATTATATAACAGTGTGTTAATAGTGTTCACAAAAACAGAAATAACCCCTTAAAAACAGAAATGACCTTTCACTGTTATGAAGGGACGGATATGCTTCAAATAGCCGTACCGTACCATACCAAATAATTATCTGTTTTATATTTTTTATAAAAATCTTTTGACTTAATTCAGCACATGGATTTTGTTTACCAATCATT

mRNA sequence

AAACTGTAGAAATTAAAATATACAAAATAATAAAAAATAAAGACATAGGTCCATCTGTCCAATTATTCAGAAATTTAAATATATTTCAGGTAAATTTATAAATTTTGGAAGATGGAAAATTAAGGTGAAAATTACCGGTAGGTTCATATATTTAACCTAAAAAAAAAAAGTTGAGGGATACGATGAATCGACTAGGGAATTGTCTGACAGTTGCATAAGGAGGGTCGACATGTCGTCATTTTTGGATTGGTCTCAACTCCATTGCTGAGATTTCGCGCCGGGCTTTCTGACAACTTCAGTTACTTCCCATTCTCTTTGCGATTCTGTGTTCCACAGAGAACAAGCAAGATGAACGGTGCTCAGGGATCGCATTCACTGGCCTTCAGGGTGATGAGGCTCTGTAGGCCGTCATTTCAAGTTGATTCTCCTCTCCGCTTCGATCCGGTCGATTTAGTCGCTGGCGAGGACATTTTTGACGACCCTGTGGCTGCTCGCCAACTCCCTCGTCTCCTTGAAGCCCAATTGTCCGACGAATCCGATTCCGATCCCAGCTACAGTTCCAGATTCCTTCTTCATGACTCCTCGGATGCTATGGGCCTCACTGGTCTCCTCGTACTCCCTCAAGCTTTCGGGGCGATTTATTTAGGCGAGACTTTCTGTAGCTATATCAGTGTGAATAATAGCTCCGATTTTGAAGTCAGGGACGTTATTATCAAGGCAGAAATTCAAACGGAGAGGCAGAGAATCCTTCTTCTGGATTCATCAAAATCCCCTGTTGAAACTATACGTGCTGGGGGTCGTTACGACTTCATTGTCGAACACGATGTGAAGGAACTCGGAAGTCACACGCTAGTCTGCACCGCATTGTACAATGATGGTGATGGTGAGCGTAAATATCTACCACAGTTTTTCAAGTTCATGGTTGCGAATCCACTCTCGGTCAGAACAAAGGTCCGTGTTGTGAAGGTATGTTTTGCTGACTAAAAGCAGTCAACGAGAGTACATTCTTAGAAGCTTGCATTGAAAACCATACAAAATCAAATCTATTAATGGACCAAGTTGATTTTGAGCCTTCCCCAAACTGGAATGCAGTGATAATCAATGCTGATGAACATCACTCTGAACTTAAATCTACAACAAGAGAGGTATTCAAGCCTCCTATATTGGTCAGATCAGGTGGAGGAATCCATAATTTTCTTTATCAATTGAAATTTTCAACGCATGGTTCTTCTCCTCGGAAAGTTGAGGGAAGTAATATTCTTGGTAAACTTCAGTTAACATGGCGTACAAATATGGGTGAACCTGGACGGCTACAAACACAACAGATTTTGGGTTCTCCCATTATTCGCAAGGAGCTTGAGCTTCATGTTGTTGAGATGCCAGATGTTATCAGATTGGAGAGGCCTTTTACTTTACATATGCGTCTCACAACACAGATTGAGAGGGAATTGGGCCCTTTTGAGGTTTGGATGTCACAAAATGGTTCAGATGAGGAAAAAGTTGTTATGGTTAATGGTCTACAGACAATGGTCATACCAAGAGTTGAGCCACATGGTTCCACAGATTTCCACCTGAACCTCATTGCCACTAAACCCGGAGTTCAGAGAATCGCAGGCATTAAAGTCTTCGACACAAGGGAGAAGAAATCCTATGACCACCCTTTGCCAGATCTAGAGATTTATGTCGATCTGGAATGAACGTCTCGACTCGACTGATTTGGTCTTGACAAGACTCTTCACTTCCTGCATTGTTTAGGACACTAAGATGTAAACATCCCATGACCTGCATCATTCCTGGAATTCAGCAGCCTCATGGAACCAACGATCAAGCCCGACACTCGTTCTCAAGCGTGCGCTCAATAGAGACGCTCTTATTAGATGCCTACGGTACTCCATTCTCATTCTTTGGTTAGATTATTGCAAAAATGGTTTGTCCTTCAGGGCAGAAGGAAGCAACTGGGTAGCAATATGGACCCCTCCTTGGCCTTGTTTTTCAAATGCGATGGAGTAACAGAAGAGGGAAATGATTATATAACAGTGTGTTAATAGTGTTCACAAAAACAGAAATAACCCCTTAAAAACAGAAATGACCTTTCACTGTTATGAAGGGACGGATATGCTTCAAATAGCCGTACCGTACCATACCAAATAATTATCTGTTTTATATTTTTTATAAAAATCTTTTGACTTAATTCAGCACATGGATTTTGTTTACCAATCATT

Coding sequence (CDS)

ATGAACGGTGCTCAGGGATCGCATTCACTGGCCTTCAGGGTGATGAGGCTCTGTAGGCCGTCATTTCAAGTTGATTCTCCTCTCCGCTTCGATCCGGTCGATTTAGTCGCTGGCGAGGACATTTTTGACGACCCTGTGGCTGCTCGCCAACTCCCTCGTCTCCTTGAAGCCCAATTGTCCGACGAATCCGATTCCGATCCCAGCTACAGTTCCAGATTCCTTCTTCATGACTCCTCGGATGCTATGGGCCTCACTGGTCTCCTCGTACTCCCTCAAGCTTTCGGGGCGATTTATTTAGGCGAGACTTTCTGTAGCTATATCAGTGTGAATAATAGCTCCGATTTTGAAGTCAGGGACGTTATTATCAAGGCAGAAATTCAAACGGAGAGGCAGAGAATCCTTCTTCTGGATTCATCAAAATCCCCTGTTGAAACTATACGTGCTGGGGGTCGTTACGACTTCATTGTCGAACACGATGTGAAGGAACTCGGAAGTCACACGCTAGTCTGCACCGCATTGTACAATGATGGTGATGGTGAGCGTAAATATCTACCACAGTTTTTCAAGTTCATGGTTGCGAATCCACTCTCGGTCAGAACAAAGGTCCGTGTTGTGAAGGTATGTTTTGCTGACTAA

Protein sequence

MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLSDESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDVIIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGERKYLPQFFKFMVANPLSVRTKVRVVKVCFAD

Homology

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BLAST of Cp4.1LG20g04230 vs. ExPASy Swiss-Prot
Match: A7MB76 (Trafficking protein particle complex subunit 13 OS=Bos taurus OX=9913 GN=TRAPPC13 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.0e-28
Identity = 76/201 (37.81%), Postives = 112/201 (55.72%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           +N  +  H LA +VMRL +P+   + P+  +  DL    D+F+      QL R       
Sbjct: 3   VNPPKQEHLLALKVMRLTKPTLFTNIPVTCEEKDLPG--DLFN------QLMR------- 62

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
                DPS        + ++ + L  +L LPQ FG I+LGETF SYISV+N S+  V+D+
Sbjct: 63  ----DDPS------TVNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDI 122

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           ++KA++QT  QR L L +S + V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQSGE 177

Query: 181 RKYLPQFFKFMVANPLSVRTK 202
           + Y  +FFKF V  PL V+TK
Sbjct: 183 KMYFRKFFKFQVLKPLDVKTK 177

[Close]

BLAST of Cp4.1LG20g04230 vs. ExPASy Swiss-Prot
Match: Q6PBY7 (Trafficking protein particle complex subunit 13 OS=Danio rerio OX=7955 GN=trappc13 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 9.0e-28
Identity = 77/201 (38.31%), Postives = 111/201 (55.22%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           +N A+  H LA +VMRL +P+   + P+  +  DL    D+F          RL++    
Sbjct: 3   VNQAKQEHLLALKVMRLTKPTLFTNMPVTCEDRDLPG--DLF---------LRLMK---- 62

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
                DPS          ++ + L  +L LPQ FG I+LGETF SYISV+N S   V+D+
Sbjct: 63  ----DDPSTVK------GAETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDI 122

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           ++KA++QT  QR L L +S S V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGE 177

Query: 181 RKYLPQFFKFMVANPLSVRTK 202
           + Y  +FFKF V  PL V+TK
Sbjct: 183 KLYFRKFFKFQVLKPLDVKTK 177

[Close]

BLAST of Cp4.1LG20g04230 vs. ExPASy Swiss-Prot
Match: A5PLN9 (Trafficking protein particle complex subunit 13 OS=Homo sapiens OX=9606 GN=TRAPPC13 PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27
Identity = 76/201 (37.81%), Postives = 112/201 (55.72%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           +N  +  H LA +VMRL +P+   + P+  +  DL    D+F+      QL R       
Sbjct: 3   VNPPKQEHLLALKVMRLTKPTLFTNIPVTCEEKDLPG--DLFN------QLMR------- 62

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
                DPS        + ++ + L  +L LPQ FG I+LGETF SYISV+N S+  V+D+
Sbjct: 63  ----DDPS------TVNGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDI 122

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           ++KA++QT  QR L L +S + V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGE 177

Query: 181 RKYLPQFFKFMVANPLSVRTK 202
           + Y  +FFKF V  PL V+TK
Sbjct: 183 KMYFRKFFKFQVLKPLDVKTK 177

[Close]

BLAST of Cp4.1LG20g04230 vs. ExPASy Swiss-Prot
Match: Q5RCG0 (Trafficking protein particle complex subunit 13 OS=Pongo abelii OX=9601 GN=TRAPPC13 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-27
Identity = 76/201 (37.81%), Postives = 112/201 (55.72%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           +N  +  H LA +VMRL +P+   + P+  +  DL    D+F+      QL R       
Sbjct: 3   VNPPKQEHLLALKVMRLTKPTLFTNIPVTCEERDLPG--DLFN------QLMR------- 62

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
                DPS        + ++ + L  +L LPQ FG I+LGETF SYISV+N S+  V+D+
Sbjct: 63  ----DDPS------TVNGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDI 122

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           ++KA++QT  QR L L +S + V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGE 177

Query: 181 RKYLPQFFKFMVANPLSVRTK 202
           + Y  +FFKF V  PL V+TK
Sbjct: 183 KMYFRKFFKFQVLKPLDVKTK 177

[Close]

BLAST of Cp4.1LG20g04230 vs. ExPASy Swiss-Prot
Match: Q3TIR1 (Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-27
Identity = 75/201 (37.31%), Postives = 112/201 (55.72%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           +N  +  H LA +VMRL +P+   + P+  +  DL    D+F+      QL +       
Sbjct: 3   VNPPKQEHLLALKVMRLTKPTLFTNIPVTCEEKDLPG--DLFN------QLMK------- 62

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
                DPS        + ++ + L  +L LPQ FG I+LGETF SYISV+N S+  V+D+
Sbjct: 63  ----DDPS------TVNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDI 122

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           ++KA++QT  QR L L +S + V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGE 177

Query: 181 RKYLPQFFKFMVANPLSVRTK 202
           + Y  +FFKF V  PL V+TK
Sbjct: 183 KMYFRKFFKFQVLKPLDVKTK 177

[Close]

BLAST of Cp4.1LG20g04230 vs. NCBI nr
Match: XP_023520337.1 (trafficking protein particle complex subunit 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408 bits (1048), Expect = 7.59e-140
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. NCBI nr
Match: XP_022927616.1 (trafficking protein particle complex subunit 13-like isoform X1 [Cucurbita moschata] >KAG6584002.1 Trafficking protein particle complex subunit 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405 bits (1042), Expect = 6.19e-139
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLR DPVDLVAGEDIFDDPVAARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. NCBI nr
Match: XP_022927617.1 (trafficking protein particle complex subunit 13-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 405 bits (1042), Expect = 6.40e-139
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLR DPVDLVAGEDIFDDPVAARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. NCBI nr
Match: XP_023001719.1 (trafficking protein particle complex subunit 13-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 403 bits (1035), Expect = 7.15e-138
Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLR DPVDLVA EDIFDDPVAARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVADEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. NCBI nr
Match: XP_023001720.1 (trafficking protein particle complex subunit 13-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 403 bits (1035), Expect = 7.39e-138
Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLR DPVDLVA EDIFDDPVAARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVADEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. ExPASy TrEMBL
Match: A0A6J1EI59 (trafficking protein particle complex subunit 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434384 PE=3 SV=1)

HSP 1 Score: 405 bits (1042), Expect = 3.00e-139
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLR DPVDLVAGEDIFDDPVAARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. ExPASy TrEMBL
Match: A0A6J1EHP1 (trafficking protein particle complex subunit 13-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434384 PE=3 SV=1)

HSP 1 Score: 405 bits (1042), Expect = 3.10e-139
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLR DPVDLVAGEDIFDDPVAARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. ExPASy TrEMBL
Match: A0A6J1KNH1 (trafficking protein particle complex subunit 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495772 PE=3 SV=1)

HSP 1 Score: 403 bits (1035), Expect = 3.46e-138
Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLR DPVDLVA EDIFDDPVAARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVADEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. ExPASy TrEMBL
Match: A0A6J1KLZ6 (trafficking protein particle complex subunit 13-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495772 PE=3 SV=1)

HSP 1 Score: 403 bits (1035), Expect = 3.58e-138
Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLR DPVDLVA EDIFDDPVAARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVADEDIFDDPVAARQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. ExPASy TrEMBL
Match: A0A6J1CEK7 (trafficking protein particle complex subunit 13 OS=Momordica charantia OX=3673 GN=LOC111010780 PE=3 SV=1)

HSP 1 Score: 382 bits (981), Expect = 4.93e-130
Identity = 193/206 (93.69%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60
           M+G+QGSHSLAFRVMRLCRPSFQV+ PLR DPVDLV GEDIFDDP AA QLPRLLEAQLS
Sbjct: 1   MSGSQGSHSLAFRVMRLCRPSFQVEPPLRLDPVDLVVGEDIFDDPEAANQLPRLLEAQLS 60

Query: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120
           D SDSD SYSSRFLLHD SDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSS+FEVRDV
Sbjct: 61  DNSDSDLSYSSRFLLHDFSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELG+HTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206
           RKYLPQFFKFMVANPLSVRTKVRVVK
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVK 206

[Close]

BLAST of Cp4.1LG20g04230 vs. TAIR 10
Match: AT2G47960.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 (InterPro:IPR010378); Has 285 Blast hits to 284 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). )

HSP 1 Score: 307.8 bits (787), Expect = 6.9e-84
Identity = 155/201 (77.11%), Postives = 173/201 (86.07%), Query Frame = 0


Query: 6   GSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLSDESDS 65
           G HSLAFRVMRLC+PSF VD PLR DP DL+AGED  DDP +A    R + +  +D  DS
Sbjct: 10  GPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSS--ADAVDS 69

Query: 66  DPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDVIIKAE 125
           D SY +RFLL+  +D +GL+GLL+LPQ+FGAIYLGETFCSYISVNNSS  EVRDV IKAE
Sbjct: 70  DLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVTIKAE 129

Query: 126 IQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGERKYLP 185
           IQTERQRILLLD+SKSPVE+IR GGRYDFIVEHDVKELG+HTLVC+ALYND DGERKYLP
Sbjct: 130 IQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGERKYLP 189

Query: 186 QFFKFMVANPLSVRTKVRVVK 207
           QFFKF+VANPLSVRTKVRVVK
Sbjct: 190 QFFKFVVANPLSVRTKVRVVK 208

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g04230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7MB76	9.0e-28	37.81	Trafficking protein particle complex subunit 13 OS=Bos taurus OX=9913 GN=TRAPPC1...	[more]
Q6PBY7	9.0e-28	38.31	Trafficking protein particle complex subunit 13 OS=Danio rerio OX=7955 GN=trappc...	[more]
A5PLN9	1.2e-27	37.81	Trafficking protein particle complex subunit 13 OS=Homo sapiens OX=9606 GN=TRAPP...	[more]
Q5RCG0	1.5e-27	37.81	Trafficking protein particle complex subunit 13 OS=Pongo abelii OX=9601 GN=TRAPP...	[more]
Q3TIR1	2.6e-27	37.31	Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trap...	[more]

BLAST of Cp4.1LG20g04230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520337.1	7.59e-140	100.00	trafficking protein particle complex subunit 13-like [Cucurbita pepo subsp. pepo...	[more]
XP_022927616.1	6.19e-139	99.51	trafficking protein particle complex subunit 13-like isoform X1 [Cucurbita mosch...	[more]
XP_022927617.1	6.40e-139	99.51	trafficking protein particle complex subunit 13-like isoform X2 [Cucurbita mosch...	[more]
XP_023001719.1	7.15e-138	99.03	trafficking protein particle complex subunit 13-like isoform X1 [Cucurbita maxim...	[more]
XP_023001720.1	7.39e-138	99.03	trafficking protein particle complex subunit 13-like isoform X2 [Cucurbita maxim...	[more]

BLAST of Cp4.1LG20g04230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EI59	3.00e-139	99.51	trafficking protein particle complex subunit 13-like isoform X1 OS=Cucurbita mos...	[more]
A0A6J1EHP1	3.10e-139	99.51	trafficking protein particle complex subunit 13-like isoform X2 OS=Cucurbita mos...	[more]
A0A6J1KNH1	3.46e-138	99.03	trafficking protein particle complex subunit 13-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1KLZ6	3.58e-138	99.03	trafficking protein particle complex subunit 13-like isoform X2 OS=Cucurbita max...	[more]
A0A6J1CEK7	4.93e-130	93.69	trafficking protein particle complex subunit 13 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Cp4.1LG20g04230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47960.1	6.9e-84	77.11	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF974 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010378	Trafficking protein particle complex subunit 13	PFAM	PF06159	DUF974	coord: 88..206 e-value: 2.2E-40 score: 139.0
IPR010378	Trafficking protein particle complex subunit 13	PANTHER	PTHR13134	UNCHARACTERIZED	coord: 1..202
None	No IPR available	PANTHER	PTHR13134:SF4	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 13-RELATED	coord: 1..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g04230.1	Cp4.1LG20g04230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990072	TRAPPIII protein complex