Cp4.1LG20g03820 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g03820
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	tobamovirus multiplication protein 1-like
Location	Cp4.1LG20: 2101823 .. 2105948 (-)
RNA-Seq Expression	Cp4.1LG20g03820
Synteny	Cp4.1LG20g03820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGGGAAACATAAGTAGAATTGTTATTTTCTACGGCCTTTCCTGAATTATGAATTGATTACTTTGGAGAGACCGACCAAGGGCCGAAAGCCAAAATCAAAGAACAATCCCTCTTCTTCTTTGCCCTCTCTCCTCGCCGGCGTTGTGGTGGCTGTCTCGCCGGCGTTTGCTTGGCCGTGTCAATTTATCGGAACTTCGGTTCTCTGAATCTACGGTGGAGAGGAAGGGCGATAGTGATTAGTGAGAAAGTTTCTTCACTAATTGGGGAAAAATGGCGAGACTGCAGCTGAACTTGACGACGGCCATGGAGATGGGCGTTACGGCATCTAGCTGGTGGAATGACATCAACGAATCTACTTTTTGGCAGGATCGGATTTTCTACTCTCTCTGTGCTATATACGCGCTAGTCTCCGCCGTTGCTTTGGTATCTCTCTCCTGCTTCCGTACCTCATCTATCTAAATATGCTGTGTTCGAGAGCTCGTTATTGTTATGGTTTGAACTGTGTGTGTGTTTTTTTCCCTTTTTAGCTGATTGGTAGGTTTGAGTGCGTTCCAGTTTTCTAGAATTTCTCCTTGTACCAACGGACGGGCGCCAATGGTTATGGTTATGGTTTATTTAATGGAACTCTAGGAGAATGAGAATTTCATATTCCTGCAAGTACAATTCGTGTTTCCATTATTAATTCATAACTTTCCGGGTTTTGAATGCAAATCTCCAAGTTGTGTTTCCATTATTAATTCAGAACTTCTTTAAGCTTTCAAGAGAAAAATAGAGCTGTAGAATAGGAATTTTTGTTTAGATTTTGGGGATCCGGAACTTAGCTTGTGTACGTGCGTGCAGATTCAATTGATTAGGATTGAACTGAGAGTTCCTGAATATGGTTGGACAACACAGAAGGTTTTCCATCTAATGAACTTCATCGTCAATGGAGGTAATATAAAGATTATTGTTCGCTTTATTCTCAATGGAGGCATTTAAGGCTTTGATTGATAGTTTCAATTCTTACTCCGTGATTCAGTACGCGCAATTGTGTTTGGGCTCCACAAGCAAGTGTTTCTTTTGCAACCAAAAGTAAGTTTACTTGAGCAGTATCTGAACCTTTGATATCATTTATGATAATTTTCCTGTGCAATATCTGTATCTCAAATATTATTTGGGATTTGCATGGACTCAAATTTTCAGTTCTTATTTTTTTCACAGAAGGGAACAGACATTTGCCAATGTTATTTAGCCTACTTGTCGCAAAGCTGTTTTACGAGATCAAATATTGCATTAGCTTGCATGAATATTGAAGATGATGAAAACCTATATAAGAGATTACTTAATCGTATTGGTGTGTCTTTTGTGGAAGATTTTCTTACAAATGTTCTACAAATTTTGGAACTCTGGCAATTATTATAGGTTACTTTGAACTACTCCCTATCGTTTATGGCCTGTGCTTTCGGTTGTTCTTGAGACACTCGAGAGTTATTCTCAAGTTAACAGCCATTTTGTAAACAACACAATAGAAAACAATTTTCAAAACTAACAGTTTTTTTAACAACACTTCCAAATGGCATCTTCGTTTCTCTTTTTTTTCTTTTTATCGAACTTTCAGATAGTTGTTCATAGTCTATCTCCTCTTAAAATCTTTAAATGTGCCATGAATACTAAACCTTTTTACTGAAGTATGTCAACTAATTCTGATTCAGGTTCTACTGTTGTTATTATTGGAACTTCCTGGTCTTCTTTTTTTCTCAACGTACACACTCCTGGTCCTCTTCTGGGCAGAGATATACCACCAGGCAAGTTTTGTGTATTGTTTTGCTATCTATTTTCTTGCTTGCAATCAAGGCTGTCTTCCCTTTTTAGTGGCTGAGCTGTCGTTGATATTGCCATCATTTGGGGCACAATGAAGATTGCTGATTTTTCATTGATTGTTTTGTTGAACAGGCAAGAAGTCTGCCAACAGATAAACTAAGAACAGTTTACATTTCAGTCAACAGTGTGATATATCTTATACAGGTACACCACTTACTCTTAGCTACCCTTGTTTGGAATTCAAAAAGTAGCCAATTCATACTTTAAAATCTTTGATTGAATTCCGAATATTATTTGGAAGGGTGAAGGAATTCCTGGTATTCAAATTCATGAGGAGGGATTTTGCTGAATCATGTTATGTGTTGAACTCAACTCAAAGTTAATAACTAGTAATTTTTGGACAGGTTTGCATTTGGATTTACATCGGGGTGGATGACAACAGCCTGGTGGAATTCATTGGAAAAATTTTCATTGCAGGTTAGTCTTTGTATCCTCATTTCCTGTGTACAAGAGGTCCGCTTTTGTAGATTGGATCTAGAAGATAATTTTATCAGTACTAATCATTTTTTTTCCCTTTCTAACCACTGCTTCCTTTTTTTCATTTTCTCAGTGGTGTCGTTCATAGCTGCAGTAGGCTTCTTGATATATGGTGGAAGGTGAGTATCTGCTTCATGTCTGGTGGACATATTATTCAATGCATCGAGATTTTGTATAATCTTTGATTTTTTTTTTACTCTTCTCTTGTATGAAAATCTTTAGATTATTTTTCATGCTTAGACGTTTTCCGATTGAATCTAAAGGGAGAAGGAAGAAACTTCATGAGGTATGTGTCCAATTTATTAGTCCTCTATCATGATGTAACCACAAACGCCATTTTCTTCCTATTATATGAAGAAAGTTGAGTTATTTATGAAGATCTCTTTCTTCCATACCTGTATGTGATATTCCTGGTAACTGATAATGTGAAGTTTATAATTTATACAAACAAATTGTCTGGTCAAATTCCATTGACTTTTCTGTGGAAATTTGTTACAAGGGGGCAATAGGCTTAGAAGATTACTTGGTTTCTGCAACGTGTGCAATTTATTATTTATACATTAAACTTGAGCTGATTTTTTGGAAAATGTGATCGTTTTAAGCTTCAGATCTATCATATATATAAAAATCTATGATCTCCACATCCCAAGCTGTTCCCCAGGTTGTGCGATTTGTATATTAAAATTTGACATAAATGACGTTAATAGAAAAAGTAAACTCCTTCAATCATAAAGCAGGATTCATGATGTTATTTGCAGGCTTATAAACCATAATTTGTGGGTTTTCATGTATATTAAGGATCCACTTAATCATGCTTATTTTTTAAAAAATAATTGCAGGTTGGATCTGTAACCGCCATATGCTTCACCTGCTTCCTCATTCGATGCTTTGTGGTATGGTTCCATATCCTCCTTCTAGTAATGAAAACCCATCTTCTTTTGGGAACGCTTATTAAGCATAGGGTGTTATAAATGGATTGAATTCTGTGGTTGAAGAAACAAAACTTTTCTGACAATGCATGGAATTCACAAGTTGTTTTTTGTTTTTTTAACTGTTGAGTGCAGGTTGCTTTATCCGCTTTTGATGCAAATGCATCACTTGACGTTTTAGAACACCCCCTTCTGAATTTCATCTACTACTCGGTACTTCGCTTTACTATGCTTGTTCGTGCTTCGTATTTCTGTTTTCGGTATAATCCGCTTACTCTAGGCTGATATAAACCATTTTGTTGAACTTACAGTTGGTCGAAATTCTGCCTTCAGCATTAGTTCTTTACATATTACGCAAATTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAGTTAATATGCATGTTCCACTCTGAACACTTCCGCCCCTCCTTGGGTCTAATGTATGAAGAGGTGGGTCTAATGTGGCATTCTGCTGTAGCATGTGAGGTCAAAGAAAGACCGAGCTGTTTGCTGCTGGCTGAGAGATATTATGTAGCTCTTCCCCCGGTGTTGTTTGATTTGAACAACTTATTCTATTTGATCTAAATGTGCAAAATTAGATTTCTGTAAGGTGAAGTATTGTGTTTTGATCTGTATCAAAGTGTCGAGGAATCAGTGATCTGCTTGTAATTTATTTTTGCTTGTTGATGTTCTTGTTTGTGATTTTGTTCAGTATTTGTAAAGAAGTGATGAAGTAGATTTATTTGCGGACTTCTGAATTTCAACTCGAACACGATTCACAGTGTCATAGAAGTCCTAAATAACAACAAAAATTTTAAAAATCCAAACAGATGGCTGAGGCGGG

mRNA sequence

TGGAGGGAAACATAAGTAGAATTGTTATTTTCTACGGCCTTTCCTGAATTATGAATTGATTACTTTGGAGAGACCGACCAAGGGCCGAAAGCCAAAATCAAAGAACAATCCCTCTTCTTCTTTGCCCTCTCTCCTCGCCGGCGTTGTGGTGGCTGTCTCGCCGGCGTTTGCTTGGCCGTGTCAATTTATCGGAACTTCGGTTCTCTGAATCTACGGTGGAGAGGAAGGGCGATAGTGATTAGTGAGAAAGTTTCTTCACTAATTGGGGAAAAATGGCGAGACTGCAGCTGAACTTGACGACGGCCATGGAGATGGGCGTTACGGCATCTAGCTGGTGGAATGACATCAACGAATCTACTTTTTGGCAGGATCGGATTTTCTACTCTCTCTGTGCTATATACGCGCTAGTCTCCGCCGTTGCTTTGATTCAATTGATTAGGATTGAACTGAGAGTTCCTGAATATGGTTGGACAACACAGAAGGTTTTCCATCTAATGAACTTCATCGTCAATGGAGTACGCGCAATTGTGTTTGGGCTCCACAAGCAAGTGTTTCTTTTGCAACCAAAAGCAAGAAGTCTGCCAACAGATAAACTAAGAACAGTTTACATTTCAGTCAACAGTGTGATATATCTTATACAGGTTTGCATTTGGATTTACATCGGGGTGGATGACAACAGCCTGGTGGAATTCATTGGAAAAATTTTCATTGCAGTGGTGTCGTTCATAGCTGCAGTAGGCTTCTTGATATATGGTGGAAGATTATTTTTCATGCTTAGACGTTTTCCGATTGAATCTAAAGGGAGAAGGAAGAAACTTCATGAGGTTGGATCTGTAACCGCCATATGCTTCACCTGCTTCCTCATTCGATGCTTTGTGGTTGCTTTATCCGCTTTTGATGCAAATGCATCACTTGACGTTTTAGAACACCCCCTTCTGAATTTCATCTACTACTCGTTGGTCGAAATTCTGCCTTCAGCATTAGTTCTTTACATATTACGCAAATTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAGTTAATATGCATGTTCCACTCTGAACACTTCCGCCCCTCCTTGGGTCTAATGTATGAAGAGGTGGGTCTAATGTGGCATTCTGCTGTAGCATGTGAGGTCAAAGAAAGACCGAGCTGTTTGCTGCTGGCTGAGAGATATTATGTAGCTCTTCCCCCGGTGTTGTTTGATTTGAACAACTTATTCTATTTGATCTAAATGTGCAAAATTAGATTTCTGTAAGGTGAAGTATTGTGTTTTGATCTGTATCAAAGTGTCGAGGAATCAGTGATCTGCTTGTAATTTATTTTTGCTTGTTGATGTTCTTGTTTGTGATTTTGTTCAGTATTTGTAAAGAAGTGATGAAGTAGATTTATTTGCGGACTTCTGAATTTCAACTCGAACACGATTCACAGTGTCATAGAAGTCCTAAATAACAACAAAAATTTTAAAAATCCAAACAGATGGCTGAGGCGGG

Coding sequence (CDS)

ATGGCGAGACTGCAGCTGAACTTGACGACGGCCATGGAGATGGGCGTTACGGCATCTAGCTGGTGGAATGACATCAACGAATCTACTTTTTGGCAGGATCGGATTTTCTACTCTCTCTGTGCTATATACGCGCTAGTCTCCGCCGTTGCTTTGATTCAATTGATTAGGATTGAACTGAGAGTTCCTGAATATGGTTGGACAACACAGAAGGTTTTCCATCTAATGAACTTCATCGTCAATGGAGTACGCGCAATTGTGTTTGGGCTCCACAAGCAAGTGTTTCTTTTGCAACCAAAAGCAAGAAGTCTGCCAACAGATAAACTAAGAACAGTTTACATTTCAGTCAACAGTGTGATATATCTTATACAGGTTTGCATTTGGATTTACATCGGGGTGGATGACAACAGCCTGGTGGAATTCATTGGAAAAATTTTCATTGCAGTGGTGTCGTTCATAGCTGCAGTAGGCTTCTTGATATATGGTGGAAGATTATTTTTCATGCTTAGACGTTTTCCGATTGAATCTAAAGGGAGAAGGAAGAAACTTCATGAGGTTGGATCTGTAACCGCCATATGCTTCACCTGCTTCCTCATTCGATGCTTTGTGGTTGCTTTATCCGCTTTTGATGCAAATGCATCACTTGACGTTTTAGAACACCCCCTTCTGAATTTCATCTACTACTCGTTGGTCGAAATTCTGCCTTCAGCATTAGTTCTTTACATATTACGCAAATTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAG

Protein sequence

MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPKARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR

Homology

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BLAST of Cp4.1LG20g03820 vs. ExPASy Swiss-Prot
Match: Q402F4 (Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 8.2e-108
Identity = 206/288 (71.53%), Postives = 226/288 (78.47%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           M RL L  ++++++    ++WW+ INES  WQD IFYSLCA YALVSAVALIQLIRIELR
Sbjct: 1   MTRLPLG-SSSIDIAGPTTNWWDQINESVQWQDGIFYSLCASYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNF+VNGVRAIVFG HKQVFL  PK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFVVNGVRAIVFGFHKQVFLFHPKVLSLAILDLPGLLFFSTFTLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLR  YIS+N  IY IQ CIW+Y+  +DNS VEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRISYISINGAIYFIQACIWVYLWSNDNSTVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAA+GFL+YGGRLF MLRRFPIESKGRRKKLHEVGSVTAICFTCFLI CFVV LSAFD
Sbjct: 181 SFIAALGFLLYGGRLFLMLRRFPIESKGRRKKLHEVGSVTAICFTCFLISCFVVVLSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPI 258
            +ASLDVL+HP+LN IYY LVEILPSALVLYILRKLPPKR+SAQYHPI
Sbjct: 241 PDASLDVLDHPVLNLIYYLLVEILPSALVLYILRKLPPKRVSAQYHPI 287

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BLAST of Cp4.1LG20g03820 vs. ExPASy Swiss-Prot
Match: Q9FEG2 (Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 4.7e-103
Identity = 194/282 (68.79%), Postives = 222/282 (78.72%), Query Frame = 0


Query: 8   LTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELRVPEYGWT 67
           LTTA+      +SWW+D+NEST WQD IF++LC  YALVSAVAL+QLIRI++RVPEYGWT
Sbjct: 16  LTTAI------TSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWT 75

Query: 68  TQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK---------------------------- 127
           TQKVFHLMNF+VNGVRA++FG H QVFL+ PK                            
Sbjct: 76  TQKVFHLMNFVVNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEI 135

Query: 128 ---ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVVSFIAAVG 187
              ARSLPTDKLR  YISVN  +YL Q+ IW YI V DNS VE +GKIFIAVVSFIAA+G
Sbjct: 136 YHQARSLPTDKLRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALG 195

Query: 188 FLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDANASLDV 247
           FL+YGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRC VVA+SAFD + +LDV
Sbjct: 196 FLLYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDV 255

Query: 248 LEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 259
           L+HP+LN IYY +VE+LPSALVL+ILRKLPPKR+SAQYHPI+
Sbjct: 256 LDHPVLNLIYYMVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

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BLAST of Cp4.1LG20g03820 vs. ExPASy Swiss-Prot
Match: Q9ZUM2 (Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=1 SV=2)

HSP 1 Score: 298.1 bits (762), Expect = 9.4e-80
Identity = 149/272 (54.78%), Postives = 193/272 (70.96%), Query Frame = 0


Query: 18  ASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNF 77
           AS+WW+D+NES  WQDRIF+ L  +Y +VS VA+IQL+RI+LRVPEYGWTTQKVFH +NF
Sbjct: 32  ASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNF 91

Query: 78  IVNGVRAIVFGLHKQVFLLQP-------------------------------KARSLPTD 137
           +VNGVRA+VF   + V  +QP                               +AR++ TD
Sbjct: 92  VVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 151

Query: 138 KLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVVSFIAAVGFLIYGGRLFF 197
            LR  + ++N+V+Y++Q+ +W+ +      ++  + K+F A VS  AA+GFL+YGGRLF 
Sbjct: 152 GLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFL 211

Query: 198 MLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDANASLDVLEHPLLNFIY 257
           ML+RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++  +AFD  A+LDVL+HP+LNFIY
Sbjct: 212 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIY 271

Query: 258 YSLVEILPSALVLYILRKLPPKRISAQYHPIR 259
           Y LVEILPS+LVL+ILRKLPPKR   QYH IR
Sbjct: 272 YLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

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BLAST of Cp4.1LG20g03820 vs. ExPASy Swiss-Prot
Match: Q948R8 (Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.7e-76
Identity = 147/270 (54.44%), Postives = 187/270 (69.26%), Query Frame = 0


Query: 20  SWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFIV 79
           +WW D+NES  WQDRIF+ L  +Y +VS +A+IQL+RI+LRVPEYGWTTQKVFH +NF+V
Sbjct: 24  NWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNFMV 83

Query: 80  NGVRAIVFGLHKQVFLLQP-------------------------------KARSLPTDKL 139
           NGVRA+VF   +    +QP                               +AR++ TD L
Sbjct: 84  NGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGL 143

Query: 140 RTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVVSFIAAVGFLIYGGRLFFML 199
           R  + ++N+V+Y+IQ+ +W+ +      L+  I K+F A VS  AA+GFL+YGGRLF ML
Sbjct: 144 RPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFLML 203

Query: 200 RRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDANASLDVLEHPLLNFIYYS 259
           +RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++   AFD  A LDVL+HP+LNFIYY 
Sbjct: 204 QRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 263

[Close]

BLAST of Cp4.1LG20g03820 vs. ExPASy Swiss-Prot
Match: Q402F3 (Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.2e-76
Identity = 146/272 (53.68%), Postives = 188/272 (69.12%), Query Frame = 0


Query: 18  ASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNF 77
           A SWW ++N S  WQDR+F+ L  +Y +VSAVAL+QLIRI++RVPEYGWTTQKVFH +NF
Sbjct: 23  AISWWEEVNRSRAWQDRLFHVLAILYGIVSAVALVQLIRIQMRVPEYGWTTQKVFHFLNF 82

Query: 78  IVNGVRAIVFGLHKQVFLLQP-------------------------------KARSLPTD 137
           +VNGVR++VF   + V  L P                               +AR++ TD
Sbjct: 83  LVNGVRSLVFAFRRDVQKLHPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 142

Query: 138 KLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVVSFIAAVGFLIYGGRLFF 197
            LR  + ++N V+Y+IQ+ +W+ I      ++  + K+F A VS  AA+GFL+YGGRLF 
Sbjct: 143 GLRPSFFTINGVVYVIQIILWLIIWWKPVRVLVILSKMFFAGVSLFAALGFLLYGGRLFL 202

Query: 198 MLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDANASLDVLEHPLLNFIY 257
           ML+RFP+ESKGRRKKL EVG VT ICF+CFLIRC ++  +AF+  A LDVL+HP+LN IY
Sbjct: 203 MLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFNKAADLDVLDHPILNLIY 262

Query: 258 YSLVEILPSALVLYILRKLPPKRISAQYHPIR 259
           Y LVEILPS+LVL+ILRKLPPKR   QYHPIR
Sbjct: 263 YLLVEILPSSLVLFILRKLPPKRGITQYHPIR 294

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BLAST of Cp4.1LG20g03820 vs. NCBI nr
Match: XP_023519001.1 (tobamovirus multiplication protein 1 [Cucurbita pepo subsp. pepo] >KAG6584079.1 Tobamovirus multiplication protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483 bits (1244), Expect = 4.03e-171
Identity = 258/289 (89.27%), Postives = 258/289 (89.27%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR
Sbjct: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPKVLLLLLLELPGLLFFSTYTLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD
Sbjct: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG20g03820 vs. NCBI nr
Match: XP_022933215.1 (tobamovirus multiplication protein 1-like [Cucurbita moschata])

HSP 1 Score: 483 bits (1244), Expect = 4.03e-171
Identity = 258/289 (89.27%), Postives = 258/289 (89.27%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR
Sbjct: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPKVLLLLLLELPGLLFFSTYSLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD
Sbjct: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG20g03820 vs. NCBI nr
Match: KAG7019681.1 (Tobamovirus multiplication protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 482 bits (1241), Expect = 1.29e-170
Identity = 258/292 (88.36%), Postives = 258/292 (88.36%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR
Sbjct: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPKVLLLLLLELPGLLFFSTYTLL 120

Query: 121 -------------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFI 180
                        ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFI
Sbjct: 121 VLFWAEIYHQASFARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFI 180

Query: 181 AVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALS 240
           AVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALS
Sbjct: 181 AVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALS 240

Query: 241 AFDANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           AFDANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 AFDANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 292

[Close]

BLAST of Cp4.1LG20g03820 vs. NCBI nr
Match: XP_023001299.1 (tobamovirus multiplication protein 1-like [Cucurbita maxima])

HSP 1 Score: 481 bits (1239), Expect = 2.33e-170
Identity = 255/289 (88.24%), Postives = 258/289 (89.27%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCA+YA+VSAVALIQLIRIELR
Sbjct: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYAIVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVF+LQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFILQPKVLLLLLLELPGLLFFSTYTLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD
Sbjct: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG20g03820 vs. NCBI nr
Match: XP_004145105.1 (tobamovirus multiplication protein 1 [Cucumis sativus] >KGN64534.1 hypothetical protein Csa_013301 [Cucumis sativus])

HSP 1 Score: 470 bits (1209), Expect = 8.67e-166
Identity = 248/289 (85.81%), Postives = 255/289 (88.24%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           M RLQLNLTT MEMGVTASSWWNDINESTFWQDRIFYSLCA+YALVSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTTMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPKVLLLLLLELPGLLFFSTYTLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLRTVYIS+NSVIYLIQVCIWIYIGV+DNS+VEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISINSVIYLIQVCIWIYIGVNDNSVVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD
Sbjct: 181 SFIAALGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           A+ASLDVL+HPLLNFIYY LVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 ADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG20g03820 vs. ExPASy TrEMBL
Match: A0A6J1F4B4 (tobamovirus multiplication protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111440060 PE=3 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 1.95e-171
Identity = 258/289 (89.27%), Postives = 258/289 (89.27%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR
Sbjct: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPKVLLLLLLELPGLLFFSTYSLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD
Sbjct: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG20g03820 vs. ExPASy TrEMBL
Match: A0A6J1KMC4 (tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495472 PE=3 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 1.13e-170
Identity = 255/289 (88.24%), Postives = 258/289 (89.27%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCA+YA+VSAVALIQLIRIELR
Sbjct: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYAIVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVF+LQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFILQPKVLLLLLLELPGLLFFSTYTLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD
Sbjct: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG20g03820 vs. ExPASy TrEMBL
Match: A0A0A0LU94 (DUF1084 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063580 PE=3 SV=1)

HSP 1 Score: 470 bits (1209), Expect = 4.20e-166
Identity = 248/289 (85.81%), Postives = 255/289 (88.24%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           M RLQLNLTT MEMGVTASSWWNDINESTFWQDRIFYSLCA+YALVSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTTMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPKVLLLLLLELPGLLFFSTYTLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLRTVYIS+NSVIYLIQVCIWIYIGV+DNS+VEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISINSVIYLIQVCIWIYIGVNDNSVVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD
Sbjct: 181 SFIAALGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           A+ASLDVL+HPLLNFIYY LVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 ADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG20g03820 vs. ExPASy TrEMBL
Match: A0A5D3BHU2 (Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005880 PE=3 SV=1)

HSP 1 Score: 467 bits (1201), Expect = 6.95e-165
Identity = 246/289 (85.12%), Postives = 254/289 (87.89%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           M RLQLNLTT MEMGVTA+SWWNDINESTFWQDRIFYSLCA+YALVSAVALIQLIRIELR
Sbjct: 1   MGRLQLNLTTTMEMGVTATSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLH QVFLLQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHNQVFLLQPKVFLLLLLELPGLLFFSTYTLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLRTVYIS+NSVIYLIQVCIWIYIGV+DNS+VEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISINSVIYLIQVCIWIYIGVNDNSVVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD
Sbjct: 181 SFIAALGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           A+ASLDVL+HPLLNFIYY LVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 ADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG20g03820 vs. ExPASy TrEMBL
Match: A0A1S3B2E1 (tobamovirus multiplication protein 1 OS=Cucumis melo OX=3656 GN=LOC103485394 PE=3 SV=1)

HSP 1 Score: 467 bits (1201), Expect = 6.95e-165
Identity = 246/289 (85.12%), Postives = 254/289 (87.89%), Query Frame = 0


Query: 1   MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELR 60
           M RLQLNLTT MEMGVTA+SWWNDINESTFWQDRIFYSLCA+YALVSAVALIQLIRIELR
Sbjct: 1   MGRLQLNLTTTMEMGVTATSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK--------------------- 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGLH QVFLLQPK                     
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHNQVFLLQPKVFLLLLLELPGLLFFSTYTLL 120

Query: 121 ----------ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVV 180
                     ARSLPTDKLRTVYIS+NSVIYLIQVCIWIYIGV+DNS+VEFIGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISINSVIYLIQVCIWIYIGVNDNSVVEFIGKIFIAVV 180

Query: 181 SFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240
           SFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD
Sbjct: 181 SFIAALGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 241 ANASLDVLEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 258
           A+ASLDVL+HPLLNFIYY LVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 ADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG20g03820 vs. TAIR 10
Match: AT4G21790.1 (tobamovirus multiplication 1 )

HSP 1 Score: 375.6 bits (963), Expect = 3.3e-104
Identity = 194/282 (68.79%), Postives = 222/282 (78.72%), Query Frame = 0


Query: 8   LTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELRVPEYGWT 67
           LTTA+      +SWW+D+NEST WQD IF++LC  YALVSAVAL+QLIRI++RVPEYGWT
Sbjct: 16  LTTAI------TSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWT 75

Query: 68  TQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPK---------------------------- 127
           TQKVFHLMNF+VNGVRA++FG H QVFL+ PK                            
Sbjct: 76  TQKVFHLMNFVVNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEI 135

Query: 128 ---ARSLPTDKLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVVSFIAAVG 187
              ARSLPTDKLR  YISVN  +YL Q+ IW YI V DNS VE +GKIFIAVVSFIAA+G
Sbjct: 136 YHQARSLPTDKLRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALG 195

Query: 188 FLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDANASLDV 247
           FL+YGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRC VVA+SAFD + +LDV
Sbjct: 196 FLLYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDV 255

Query: 248 LEHPLLNFIYYSLVEILPSALVLYILRKLPPKRISAQYHPIR 259
           L+HP+LN IYY +VE+LPSALVL+ILRKLPPKR+SAQYHPI+
Sbjct: 256 LDHPVLNLIYYMVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of Cp4.1LG20g03820 vs. TAIR 10
Match: AT2G02180.1 (tobamovirus multiplication protein 3 )

HSP 1 Score: 298.1 bits (762), Expect = 6.7e-81
Identity = 149/272 (54.78%), Postives = 193/272 (70.96%), Query Frame = 0


Query: 18  ASSWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNF 77
           AS+WW+D+NES  WQDRIF+ L  +Y +VS VA+IQL+RI+LRVPEYGWTTQKVFH +NF
Sbjct: 32  ASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNF 91

Query: 78  IVNGVRAIVFGLHKQVFLLQP-------------------------------KARSLPTD 137
           +VNGVRA+VF   + V  +QP                               +AR++ TD
Sbjct: 92  VVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 151

Query: 138 KLRTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVVSFIAAVGFLIYGGRLFF 197
            LR  + ++N+V+Y++Q+ +W+ +      ++  + K+F A VS  AA+GFL+YGGRLF 
Sbjct: 152 GLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFL 211

Query: 198 MLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDANASLDVLEHPLLNFIY 257
           ML+RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++  +AFD  A+LDVL+HP+LNFIY
Sbjct: 212 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIY 271

Query: 258 YSLVEILPSALVLYILRKLPPKRISAQYHPIR 259
           Y LVEILPS+LVL+ILRKLPPKR   QYH IR
Sbjct: 272 YLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

[Close]

BLAST of Cp4.1LG20g03820 vs. TAIR 10
Match: AT1G14530.1 (Protein of unknown function (DUF1084) )

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-77
Identity = 147/270 (54.44%), Postives = 187/270 (69.26%), Query Frame = 0


Query: 20  SWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFIV 79
           +WW D+NES  WQDRIF+ L  +Y +VS +A+IQL+RI+LRVPEYGWTTQKVFH +NF+V
Sbjct: 24  NWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNFMV 83

Query: 80  NGVRAIVFGLHKQVFLLQP-------------------------------KARSLPTDKL 139
           NGVRA+VF   +    +QP                               +AR++ TD L
Sbjct: 84  NGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGL 143

Query: 140 RTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVVSFIAAVGFLIYGGRLFFML 199
           R  + ++N+V+Y+IQ+ +W+ +      L+  I K+F A VS  AA+GFL+YGGRLF ML
Sbjct: 144 RPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFLML 203

Query: 200 RRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDANASLDVLEHPLLNFIYYS 259
           +RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++   AFD  A LDVL+HP+LNFIYY 
Sbjct: 204 QRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 263

[Close]

BLAST of Cp4.1LG20g03820 vs. TAIR 10
Match: AT1G14530.2 (Protein of unknown function (DUF1084) )

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-77
Identity = 147/270 (54.44%), Postives = 187/270 (69.26%), Query Frame = 0


Query: 20  SWWNDINESTFWQDRIFYSLCAIYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFIV 79
           +WW D+NES  WQDRIF+ L  +Y +VS +A+IQL+RI+LRVPEYGWTTQKVFH +NF+V
Sbjct: 24  NWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNFMV 83

Query: 80  NGVRAIVFGLHKQVFLLQP-------------------------------KARSLPTDKL 139
           NGVRA+VF   +    +QP                               +AR++ TD L
Sbjct: 84  NGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGL 143

Query: 140 RTVYISVNSVIYLIQVCIWIYIGVDDNSLVEFIGKIFIAVVSFIAAVGFLIYGGRLFFML 199
           R  + ++N+V+Y+IQ+ +W+ +      L+  I K+F A VS  AA+GFL+YGGRLF ML
Sbjct: 144 RPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFLML 203

Query: 200 RRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDANASLDVLEHPLLNFIYYS 259
           +RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++   AFD  A LDVL+HP+LNFIYY 
Sbjct: 204 QRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 263

[Close]

BLAST of Cp4.1LG20g03820 vs. TAIR 10
Match: AT3G59090.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 3.5e-05
Identity = 41/141 (29.08%), Postives = 68/141 (48.23%), Query Frame = 0


Query: 124 VCIWIYIG---VDDNSLVEFIGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIES-KGRR 183
           + IWI  G   ++ + L E    IF A++  I   G   YG RL F LR+   E      
Sbjct: 191 ILIWIASGKNPMNSSLLAEVYVDIFAAII-LITGGGICFYGLRLLFNLRKVRSEQVSSEM 250

Query: 184 KKLHEVGSVTAICFTCFLIRCFVVALSAFD--ANASLDVLEHPLLNFIYYSLVEILPSAL 243
           +K+  +  V+ +CFT   +   +  +  F     + L  ++  +L  IYY +   +P A 
Sbjct: 251 RKVSGLAGVSVVCFTVSSLIALLTHIPLFYHWNPSKLHGIKALVLLIIYYFIGSTVPLAF 310

Query: 244 VLYILRKLPPKRISAQYHPIR 259
           VL++LR+LPP+ I ++    R
Sbjct: 311 VLWVLRELPPQNIVSRQEDTR 330

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g03820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q402F4	8.2e-108	71.53	Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 S...	[more]
Q9FEG2	4.7e-103	68.79	Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=...	[more]
Q9ZUM2	9.4e-80	54.78	Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=...	[more]
Q948R8	1.7e-76	54.44	Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1	[more]
Q402F3	2.2e-76	53.68	Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 S...	[more]

BLAST of Cp4.1LG20g03820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519001.1	4.03e-171	89.27	tobamovirus multiplication protein 1 [Cucurbita pepo subsp. pepo] >KAG6584079.1 ...	[more]
XP_022933215.1	4.03e-171	89.27	tobamovirus multiplication protein 1-like [Cucurbita moschata]	[more]
KAG7019681.1	1.29e-170	88.36	Tobamovirus multiplication protein 1, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023001299.1	2.33e-170	88.24	tobamovirus multiplication protein 1-like [Cucurbita maxima]	[more]
XP_004145105.1	8.67e-166	85.81	tobamovirus multiplication protein 1 [Cucumis sativus] >KGN64534.1 hypothetical ...	[more]

BLAST of Cp4.1LG20g03820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4B4	1.95e-171	89.27	tobamovirus multiplication protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KMC4	1.13e-170	88.24	tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0LU94	4.20e-166	85.81	DUF1084 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063580 PE=...	[more]
A0A5D3BHU2	6.95e-165	85.12	Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3B2E1	6.95e-165	85.12	tobamovirus multiplication protein 1 OS=Cucumis melo OX=3656 GN=LOC103485394 PE=...	[more]

BLAST of Cp4.1LG20g03820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21790.1	3.3e-104	68.79	tobamovirus multiplication 1	[more]
AT2G02180.1	6.7e-81	54.78	tobamovirus multiplication protein 3	[more]
AT1G14530.1	1.2e-77	54.44	Protein of unknown function (DUF1084)	[more]
AT1G14530.2	1.2e-77	54.44	Protein of unknown function (DUF1084)	[more]
AT3G59090.1	3.5e-05	29.08	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009457	THH1/TOM1/TOM3 domain	PFAM	PF06454	DUF1084	coord: 99..258 e-value: 4.9E-80 score: 268.8 coord: 18..99 e-value: 6.9E-38 score: 130.6
None	No IPR available	PANTHER	PTHR31142:SF1	TOBAMOVIRUS MULTIPLICATION PROTEIN 1	coord: 99..258
None	No IPR available	PANTHER	PTHR31142:SF1	TOBAMOVIRUS MULTIPLICATION PROTEIN 1	coord: 11..100
IPR040226	THH1/TOM1/TOM3	PANTHER	PTHR31142	TOBAMOVIRUS MULTIPLICATION PROTEIN 1-LIKE ISOFORM X1	coord: 11..100
IPR040226	THH1/TOM1/TOM3	PANTHER	PTHR31142	TOBAMOVIRUS MULTIPLICATION PROTEIN 1-LIKE ISOFORM X1	coord: 99..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g03820.1	Cp4.1LG20g03820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009705	plant-type vacuole membrane