Cp4.1LG20g02930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g02930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	squamosa promoter-binding-like protein 13A
Location	Cp4.1LG20: 1684871 .. 1686762 (+)
RNA-Seq Expression	Cp4.1LG20g02930
Synteny	Cp4.1LG20g02930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCGTCAACTTCAGGATCATCAAAGAGAGCCAGAGGAGCTCACAGTGGCGCCATTCAGCCAGTTTCTTGCCTTGTCGATGGCTGCAATTCAGATCTAAGCAACTGTAGAGACTACCACAGGCGCCATAAGGTCTGTGAGCTGCATTCCAAGACTCCTCAGGTCACAATCGCTGGCCTCAACCAGAGATTTTGCCAGCAGTGTAGTAGGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTTTTTGGTCTTTCTTTTTTCCTTTTTTCTTTCTAATCATGGAATTCATCTGTTCTCTGTCACCAACTTTTGAGCACTACCCATTATTTTATTCTTCAAGAACTGTTGATGTTTTATGTCAAGAAATCTGTCCTCTTTCTGGGGTCTTAAACGTTTTTCCAGAACGTTTGCCGCTGGATTTAGCTGCGCTTTCGAGTCTTTTCATGAGAAAATTCTCTGTTATTGAATGTTCCAAAACTTGCAGAAGCTTTTTCCCAATTTAGAGTTCATTTCAGTGACCAAATTCTGCAGCCATTAATGAATTCCCATCTGCTCTGTTCTTCTCTGCTCTGTTCTGCTCTGTTTTTCCGTTTTTCCAGAACGCTTGCCGCTGGATTTAGTTGTGGTTTCGAATCTTTTCATGAGAAAATTCTCAGTTAATTAATGTTCCAACACTTTCAGAAGCTTTTTCCCAATTTAATGTTCATTTCAGTGACCAAATTCTGTAGCCATTAATGAATTCCCATCTGCTCTGTTCTGTTCTGCTCTGCTCTGTTCTGCTCTGTTTTCTCCCCCCATAGGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGGAAACGACTGGACGGCCACAACCGGCGGCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGGTGGCCATTTCTCCTATCATCAAGGTTAGAATGTTTGGTTGTTTTTTAATGGAAAAATCTCAATTACTGAAGTAATATGCATTTCTTCCAGGTGCCCATTTGTTGCCATTTACAAGCTCGCAAGTTTTTCCACCGACCACTTTGAGCAGCCACGGGTGGTCGTCTGCAGGAGATCCCTCCGTCTTCCACAACCAGAACCAAGAACTCAATTTTCTCGAAAAACAGAGGCTTTTTGTGGAACCATCCAGCTACAAAGCGGCGCAACCACTGGGGTTCTTGCATGGCGGCCCGACAACATGCCGACCACTTCTCCGGAGTATCAATACCCTGTCGGAAAACACCGGCGGCGAAAGGAACAAGATGGTTTACTACAGATTCAGAGTTGGAGTTAGTGAATCAGATTGTGCTCTCTCTCTTCTGTCATCGTCACAGCAGGCCGCCGACAATGGTTCTTCTGGGCATTTGGGTTTGAGCATAATCGAACAAGAACAGCAACAGCGTAGCGCCGCCATTTCTCTGCTGCAGCCATTGAGCCACCACCACCACCATAAACTCGACAGTTTTGAGAATTCTGAGTCTTCTTCGGTTCATGGGGCTGTTAATTTCCCCGAGATCTTTGGAATTCCCTCCGAGAATGCTGGAAATCAATCCCCTTCCACTCTTCCTTTTCACTGGGAGTAAGTAGAAACCAAAGGAAACAAATTCCTAATTATGTCTGCCTGTCAGTGTTCTAATATTAATAAACATGAAGAACTCTCTCCTGCGTTTGTTTTTTCCTGTTCTTTTGTTGTTCGATACGGTATGAGTTTCGAACTTTTGATATCACACGTGCATTCTTCTCTGGATTGTTATTGTGTAACGACCCAGATCCATCCGCTAGCAGATATTATCTTCTTTAAGTTTCCCCCTTTAAAACACGTATGTTAGGGGAAGGTTTCGACACACTTGTAAATGGTGTTTTGTTTTCCTCCCAACTAA

mRNA sequence

ATGGCGCCGTCAACTTCAGGATCATCAAAGAGAGCCAGAGGAGCTCACAGTGGCGCCATTCAGCCAGTTTCTTGCCTTGTCGATGGCTGCAATTCAGATCTAAGCAACTGTAGAGACTACCACAGGCGCCATAAGGTCTGTGAGCTGCATTCCAAGACTCCTCAGGTCACAATCGCTGGCCTCAACCAGAGATTTTGCCAGCAGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGGAAACGACTGGACGGCCACAACCGGCGGCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGGTGGCCATTTCTCCTATCATCAAGGTGCCCATTTGTTGCCATTTACAAGCTCGCAAGTTTTTCCACCGACCACTTTGAGCAGCCACGGGTGGTCGTCTGCAGGAGATCCCTCCGTCTTCCACAACCAGAACCAAGAACTCAATTTTCTCGAAAAACAGAGGCTTTTTGTGGAACCATCCAGCTACAAAGCGGCGCAACCACTGGGGTTCTTGCATGGCGGCCCGACAACATGCCGACCACTTCTCCGGAGTATCAATACCCTGTCGGAAAACACCGGCGGCGAAAGGAACAAGATGGTTTACTACAGATTCAGAGTTGGAGTTAGTGAATCAGATTGTGCTCTCTCTCTTCTGTCATCGTCACAGCAGGCCGCCGACAATGGTTCTTCTGGGCATTTGGGTTTGAGCATAATCGAACAAGAACAGCAACAGCGTAGCGCCGCCATTTCTCTGCTGCAGCCATTGAGCCACCACCACCACCATAAACTCGACAGTTTTGAGAATTCTGAGTCTTCTTCGGTTCATGGGGCTGTTAATTTCCCCGAGATCTTTGGAATTCCCTCCGAGAATGCTGGAAATCAATCCCCTTCCACTCTTCCTTTTCACTGGGAGTAAGTAGAAACCAAAGGAAACAAATTCCTAATTATGTCTGCCTGTCAGTGTTCTAATATTAATAAACATGAAGAACTCTCTCCTGCGTTTGTTTTTTCCTGTTCTTTTGTTGTTCGATACGGTATGAGTTTCGAACTTTTGATATCACACGTGCATTCTTCTCTGGATTGTTATTGTGTAACGACCCAGATCCATCCGCTAGCAGATATTATCTTCTTTAAGTTTCCCCCTTTAAAACACGTATGTTAGGGGAAGGTTTCGACACACTTGTAAATGGTGTTTTGTTTTCCTCCCAACTAA

Coding sequence (CDS)

ATGGCGCCGTCAACTTCAGGATCATCAAAGAGAGCCAGAGGAGCTCACAGTGGCGCCATTCAGCCAGTTTCTTGCCTTGTCGATGGCTGCAATTCAGATCTAAGCAACTGTAGAGACTACCACAGGCGCCATAAGGTCTGTGAGCTGCATTCCAAGACTCCTCAGGTCACAATCGCTGGCCTCAACCAGAGATTTTGCCAGCAGTTTCATTCACTTGAGGAATTTGACGAAGGAAAGAGAAGCTGCCGGAAACGACTGGACGGCCACAACCGGCGGCGGAGAAAGCCTCAAACTGACCTCTTGCCTCGATCTGGTGGCCATTTCTCCTATCATCAAGGTGCCCATTTGTTGCCATTTACAAGCTCGCAAGTTTTTCCACCGACCACTTTGAGCAGCCACGGGTGGTCGTCTGCAGGAGATCCCTCCGTCTTCCACAACCAGAACCAAGAACTCAATTTTCTCGAAAAACAGAGGCTTTTTGTGGAACCATCCAGCTACAAAGCGGCGCAACCACTGGGGTTCTTGCATGGCGGCCCGACAACATGCCGACCACTTCTCCGGAGTATCAATACCCTGTCGGAAAACACCGGCGGCGAAAGGAACAAGATGGTTTACTACAGATTCAGAGTTGGAGTTAGTGAATCAGATTGTGCTCTCTCTCTTCTGTCATCGTCACAGCAGGCCGCCGACAATGGTTCTTCTGGGCATTTGGGTTTGAGCATAATCGAACAAGAACAGCAACAGCGTAGCGCCGCCATTTCTCTGCTGCAGCCATTGAGCCACCACCACCACCATAAACTCGACAGTTTTGAGAATTCTGAGTCTTCTTCGGTTCATGGGGCTGTTAATTTCCCCGAGATCTTTGGAATTCCCTCCGAGAATGCTGGAAATCAATCCCCTTCCACTCTTCCTTTTCACTGGGAGTAA

Protein sequence

MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQRFCQQFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLLPFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGGPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHLGLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGNQSPSTLPFHWE

Homology

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BLAST of Cp4.1LG20g02930 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.1e-45
Identity = 127/310 (40.97%), Postives = 162/310 (52.26%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLLPFT 123
           RFCQQ   FH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS     + S  HL 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSS-----SSSVPHL- 319

Query: 244 LSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGNQ 303
                         +SL Q       +    FEN+ + S    +         S N   +
Sbjct: 320 ----------LQPPLSLSQEAVETVFYGSGLFENASAVSDGSVI---------SGNEAVR 359

Query: 304 SPSTLPFHWE 309
            P T PFHWE
Sbjct: 380 LPQTFPFHWE 359

[Close]

BLAST of Cp4.1LG20g02930 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.1e-45
Identity = 127/310 (40.97%), Postives = 162/310 (52.26%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLLPFT 123
           RFCQQ   FH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS     + S  HL 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSS-----SSSVPHL- 319

Query: 244 LSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGNQ 303
                         +SL Q       +    FEN+ + S    +         S N   +
Sbjct: 320 ----------LQPPLSLSQEAVETVFYGSGLFENASAVSDGSVI---------SGNEAVR 359

Query: 304 SPSTLPFHWE 309
            P T PFHWE
Sbjct: 380 LPQTFPFHWE 359

[Close]

BLAST of Cp4.1LG20g02930 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.9e-36
Identity = 104/253 (41.11%), Postives = 134/253 (52.96%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQP---VSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 63
           + +G++KR R A  G  Q     SC VDGC +DL  CRDYHRRHKVCE HSKTP V +AG
Sbjct: 80  AAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAG 139

Query: 64  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 123
              RFCQQ   FH L EFD  KRSCRKRLDGHNRRRRKPQ D +  S    +  QG    
Sbjct: 140 REMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDTM-ASASFIASQQGTRFS 199

Query: 124 PFTSSQV---FPPTTLSSHGWSSAGDPSVFHNQNQ---ELNFLEKQRLFV-----EPSSY 183
           PF   ++   +PP  + +       + S +H  +Q     +   +Q+ FV      P+  
Sbjct: 200 PFAHPRLEASWPPGVMKT-------EESPYHITHQIPLGSSSSSRQQHFVALGAATPAYA 259

Query: 184 KAAQPLGFLHGGPTT---------------CRPLLRSINTLSENTGGERNKMVYYRFRVG 225
           K  +   FL  G  +               C+PLLR+    SE++G   +KM   +    
Sbjct: 260 KEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRT-GAPSESSGAGGSKMFSDQGLAR 319

[Close]

BLAST of Cp4.1LG20g02930 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.6e-36
Identity = 104/254 (40.94%), Postives = 134/254 (52.76%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQP----VSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIA 63
           + +G++KR R A  G  Q      SC VDGC +DL  CRDYHRRHKVCE HSKTP V +A
Sbjct: 80  AAAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVA 139

Query: 64  GLNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHL 123
           G   RFCQQ   FH L EFD  KRSCRKRLDGHNRRRRKPQ D +  S    +  QG   
Sbjct: 140 GREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDTM-ASASFIASQQGTRF 199

Query: 124 LPFTSSQV---FPPTTLSSHGWSSAGDPSVFHNQNQ---ELNFLEKQRLFV-----EPSS 183
            PF   ++   +PP  + +       + S +H  +Q     +   +Q+ FV      P+ 
Sbjct: 200 SPFAHPRLEASWPPGVMKT-------EESPYHITHQIPLGSSSSSRQQHFVALGAATPAY 259

Query: 184 YKAAQPLGFLHGGPTT---------------CRPLLRSINTLSENTGGERNKMVYYRFRV 225
            K  +   FL  G  +               C+PLLR+    SE++G   +KM   +   
Sbjct: 260 AKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRT-GAPSESSGAGGSKMFSDQGLA 319

[Close]

BLAST of Cp4.1LG20g02930 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-35
Identity = 126/373 (33.78%), Postives = 171/373 (45.84%), Query Frame = 0


Query: 2   APSTSGSSKRARG-AHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 61
           A ++S  +KR RG A +G  Q  SC VDGC  DLS CRDYHRRHKVCE HSKTP V ++G
Sbjct: 94  AAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSG 153

Query: 62  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 121
              RFCQQ   FH L+EFDE KRSCRKRLDGHNRRRRKPQ D +  S  + +  QGA   
Sbjct: 154 REMRFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDPM-NSASYLASQQGARFS 213

Query: 122 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 181
           PF +    P    S  G     +   + +    L    +Q+ FV  +S    +   FL  
Sbjct: 214 PFAT----PRPEASWTGMIKTEESPYYTHHQIPLGISSRQQHFVGSTS-DGGRRFPFLQE 273

Query: 182 G-----------------------PTTCRPLLRSINTLSENTGGERN---KMVYYRFRVG 241
           G                        + C+PLL+++       GG  +   KM        
Sbjct: 274 GEISFGTGAGAGGVPMDQAAAAAAASVCQPLLKTVAPPPPPHGGGGSGGGKMFSDGGLTQ 333

Query: 242 VSESDCALSLLS--SSQQAADNGSSGHLGLSIIEQEQQQRSAAISLLQPL---------- 301
           V +SDCALSLLS  ++  A D G     G  ++ Q  +    A  L+  L          
Sbjct: 334 VLDSDCALSLLSAPANSTAIDVG-----GGRVVVQPTEHIPMAQPLISGLQFGGGGGSSA 393

Query: 302 ---SHHHHHK--------------------LDSFE-NSESSSVHGAVNFPEIFGIPSENA 309
              +  HH                      ++S + N+  SS    +N+  +F +  E +
Sbjct: 394 WFAARPHHQAATGAAATAVVVSTAGFSCPVVESEQLNTVLSSNDNEMNYNGMFHVGGEGS 453

[Close]

BLAST of Cp4.1LG20g02930 vs. NCBI nr
Match: XP_023519233.1 (squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 625 bits (1613), Expect = 3.91e-226
Identity = 308/311 (99.04%), Postives = 308/311 (99.04%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120
           LNQRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL 240

Query: 241 GLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 300
           GLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN
Sbjct: 241 GLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 300

Query: 301 QSPSTLPFHWE 308
           QSPSTLPFHWE
Sbjct: 301 QSPSTLPFHWE 311

[Close]

BLAST of Cp4.1LG20g02930 vs. NCBI nr
Match: XP_022923707.1 (squamosa promoter-binding-like protein 13A [Cucurbita moschata] >XP_022923708.1 squamosa promoter-binding-like protein 13A [Cucurbita moschata])

HSP 1 Score: 616 bits (1589), Expect = 1.78e-222
Identity = 304/311 (97.75%), Postives = 305/311 (98.07%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120
           LNQRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GH SYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAAD+GSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240

Query: 241 GLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 300
           GLS IEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 300

Query: 301 QSPSTLPFHWE 308
           QSPSTLPFHWE
Sbjct: 301 QSPSTLPFHWE 311

[Close]

BLAST of Cp4.1LG20g02930 vs. NCBI nr
Match: KAG7019750.1 (Squamosa promoter-binding-like protein 13B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 612 bits (1577), Expect = 1.25e-220
Identity = 304/312 (97.44%), Postives = 305/312 (97.76%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120
           LNQRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GH SYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAAD+GSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240

Query: 241 GLSIIEQEQQQRSAAISLLQPLSHHHHH-KLDSFENSESSSVHGAVNFPEIFGIPSENAG 300
           GLS IEQEQQQRSAAISLLQPLSHHHHH KLDSFENSESSSVHGAVNFPEIFGIPSENAG
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAG 300

Query: 301 NQSPSTLPFHWE 308
           NQSPSTLPFHWE
Sbjct: 301 NQSPSTLPFHWE 312

[Close]

BLAST of Cp4.1LG20g02930 vs. NCBI nr
Match: KAG6584159.1 (Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 610 bits (1574), Expect = 3.58e-220
Identity = 303/312 (97.12%), Postives = 305/312 (97.76%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120
           LNQRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GH SYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAAD+GSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240

Query: 241 GLSIIEQEQQQRSAAISLLQPLSHHHHH-KLDSFENSESSSVHGAVNFPEIFGIPSENAG 300
           GLS IEQEQQQRSAAISLLQPLSHHHHH KLD+FENSESSSVHGAVNFPEIFGIPSENAG
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHHKLDNFENSESSSVHGAVNFPEIFGIPSENAG 300

Query: 301 NQSPSTLPFHWE 308
           NQSPSTLPFHWE
Sbjct: 301 NQSPSTLPFHWE 312

[Close]

BLAST of Cp4.1LG20g02930 vs. NCBI nr
Match: XP_023001168.1 (squamosa promoter-binding-like protein 13A [Cucurbita maxima] >XP_023001169.1 squamosa promoter-binding-like protein 13A [Cucurbita maxima])

HSP 1 Score: 603 bits (1554), Expect = 3.72e-217
Identity = 299/311 (96.14%), Postives = 303/311 (97.43%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120
           LNQRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GHFSYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHFSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQN ELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNHELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL 240
           GPTTCRPLLRSINTLSEN+GGERNKMVYY+FRVGVSESDCALSLLSSSQQAA++GSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENSGGERNKMVYYKFRVGVSESDCALSLLSSSQQAAESGSSGHL 240

Query: 241 GLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 300
           GLS IEQEQQQRSAAISLLQPLSHHHH KLDSFE SESSSVHGAVNFPEIFGIPSENAGN
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLSHHHH-KLDSFETSESSSVHGAVNFPEIFGIPSENAGN 300

Query: 301 QSPSTLPFHWE 308
           QSPSTLPFHWE
Sbjct: 301 QSPSTLPFHWE 310

[Close]

BLAST of Cp4.1LG20g02930 vs. ExPASy TrEMBL
Match: A0A6J1EAD8 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111431335 PE=4 SV=1)

HSP 1 Score: 616 bits (1589), Expect = 8.64e-223
Identity = 304/311 (97.75%), Postives = 305/311 (98.07%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120
           LNQRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GH SYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHLSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL 240
           GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAAD+GSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADSGSSGHL 240

Query: 241 GLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 300
           GLS IEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 300

Query: 301 QSPSTLPFHWE 308
           QSPSTLPFHWE
Sbjct: 301 QSPSTLPFHWE 311

[Close]

BLAST of Cp4.1LG20g02930 vs. ExPASy TrEMBL
Match: A0A6J1KPQ7 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111495386 PE=4 SV=1)

HSP 1 Score: 603 bits (1554), Expect = 1.80e-217
Identity = 299/311 (96.14%), Postives = 303/311 (97.43%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120
           LNQRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS GHFSYHQGAHLL
Sbjct: 61  LNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGHFSYHQGAHLL 120

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 180
           PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQN ELNFLEKQRLFVEPSSYKAAQPLGFLHG
Sbjct: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNHELNFLEKQRLFVEPSSYKAAQPLGFLHG 180

Query: 181 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHL 240
           GPTTCRPLLRSINTLSEN+GGERNKMVYY+FRVGVSESDCALSLLSSSQQAA++GSSGHL
Sbjct: 181 GPTTCRPLLRSINTLSENSGGERNKMVYYKFRVGVSESDCALSLLSSSQQAAESGSSGHL 240

Query: 241 GLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGN 300
           GLS IEQEQQQRSAAISLLQPLSHHHH KLDSFE SESSSVHGAVNFPEIFGIPSENAGN
Sbjct: 241 GLSRIEQEQQQRSAAISLLQPLSHHHH-KLDSFETSESSSVHGAVNFPEIFGIPSENAGN 300

Query: 301 QSPSTLPFHWE 308
           QSPSTLPFHWE
Sbjct: 301 QSPSTLPFHWE 310

[Close]

BLAST of Cp4.1LG20g02930 vs. ExPASy TrEMBL
Match: A0A6J1JZ22 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111490133 PE=4 SV=1)

HSP 1 Score: 462 bits (1190), Expect = 1.00e-160
Identity = 244/330 (73.94%), Postives = 271/330 (82.12%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MA STSGSSKRARGA++   QPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTI G
Sbjct: 70  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 129

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120
           L QRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS G FSYHQG+HLL
Sbjct: 130 LKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLL 189

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPS----SYKAAQPLG 180
           P+T +QV+P TT+SSHGWSS G+ +  H ++Q+LNFLEKQ LFVE S    +YK AQ L 
Sbjct: 190 PYTRAQVYPSTTVSSHGWSSTGETAGLH-RDQQLNFLEKQSLFVEQSHHSNNYKTAQTLA 249

Query: 181 FLHGGPTT-CRPLLRSINTLSENTGG-----ERNKMVYYRFRVGVSESDCALSLLSSSQ- 240
           F+HGGPTT C+PLLRS+NTLSEN GG     ERNKM+Y RFR+GVSESDCALSLLSS Q 
Sbjct: 250 FMHGGPTTTCQPLLRSMNTLSENGGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSPQA 309

Query: 241 --------QAADNGSSGHLGLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSV 300
                   Q A++GSSGHL LS IEQ   QRSAA+SLLQPLSHHH H  +S+ENS+S + 
Sbjct: 310 QTDHQPQPQQAESGSSGHLDLSRIEQH--QRSAAVSLLQPLSHHHSH--NSYENSDSDNH 369

Query: 301 HGAVNFPEIFGIPSENAGNQSPSTLPFHWE 308
            GA+NFP IFGI SENAGN+SPSTLPFHWE
Sbjct: 370 GGALNFPGIFGIASENAGNESPSTLPFHWE 394

[Close]

BLAST of Cp4.1LG20g02930 vs. ExPASy TrEMBL
Match: A0A6J1GVH8 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111457246 PE=4 SV=1)

HSP 1 Score: 456 bits (1174), Expect = 2.63e-158
Identity = 241/334 (72.16%), Postives = 269/334 (80.54%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MA STSGSSKRARGA++   QPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTI G
Sbjct: 64  MASSTSGSSKRARGANNAGSQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGG 123

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 120
           L QRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS G FSYHQG+HLL
Sbjct: 124 LKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAGPFSYHQGSHLL 183

Query: 121 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPS----SYKAAQPLG 180
            +TS+QV+P TT+SSHGWSS G+ +  H ++Q+LNFLEKQ LFVE S    +YK AQ L 
Sbjct: 184 AYTSAQVYPSTTVSSHGWSSTGETAALH-RDQQLNFLEKQSLFVEQSDHSNNYKTAQTLA 243

Query: 181 FLHGGPTT-CRPLLRSINTLSENTGG-----ERNKMVYYRFRVGVSESDCALSLLSSSQ- 240
           F+HGGPTT C+PLLRS+NTLSEN GG     ERNKM+Y RFR+GVSESDCALSLLSS Q 
Sbjct: 244 FMHGGPTTTCQPLLRSMNTLSENGGGGGGGGERNKMIYDRFRIGVSESDCALSLLSSPQA 303

Query: 241 ------------QAADNGSSGHLGLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSE 300
                       Q A++GSSGHL L  IEQ   QRSAA+SLLQPL+HHHH   +S+ENS+
Sbjct: 304 QTDHQPQQQPQPQQAESGSSGHLDLGRIEQH--QRSAAVSLLQPLNHHHHSH-NSYENSD 363

Query: 301 SSSVHGAVNFPEIFGIPSENAGNQSPSTLPFHWE 308
           S +  GA+NFP IFGI SEN GN+SPSTLPFHWE
Sbjct: 364 SDNHGGALNFPGIFGIASENPGNESPSTLPFHWE 393

[Close]

BLAST of Cp4.1LG20g02930 vs. ExPASy TrEMBL
Match: A0A5A7UP61 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004790 PE=4 SV=1)

HSP 1 Score: 395 bits (1014), Expect = 4.60e-135
Identity = 219/344 (63.66%), Postives = 241/344 (70.06%), Query Frame = 0


Query: 1   MAPSTSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60
           MA STSGSSKRARG H+G  QPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG
Sbjct: 1   MASSTSGSSKRARGTHNGNTQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 60

Query: 61  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSG-GHFSYHQGAHL 120
           L QRFCQQ   FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRS  G FSYHQG  L
Sbjct: 61  LKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSAAGPFSYHQGPPL 120

Query: 121 LPFTSSQVFPPTTLSSHGWSSAG-----DPSVFHNQNQELNFLEKQR-LFVEPS------ 180
           LPFTSSQVFP TT+SSHGWSS G     DP V HN+N +LNFLEKQ+ +FVE S      
Sbjct: 121 LPFTSSQVFPSTTVSSHGWSSGGSDNATDPGVHHNRNPQLNFLEKQQSIFVETSDQTNNI 180

Query: 181 -SYKAAQPLGFLHGGPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLS 240
            +YKA+ PLG LHGG                  G ERNKM+Y RFR+G++ESDCALSLLS
Sbjct: 181 NNYKASPPLGLLHGG----------------GGGSERNKMIYDRFRIGINESDCALSLLS 240

Query: 241 SSQQAADNGSSGHLGLSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSV----- 300
           S Q    +           +Q+QQQR+AAISLL PLS  H +  D+  ++ SSSV     
Sbjct: 241 SPQTQIQSDHQPQ------QQQQQQRNAAISLLHPLSTTHQNAFDNSSDTSSSSVQISND 300

Query: 301 --------------HGAVNFPEIFGIPSENAGNQSPSTLPFHWE 308
                         HG +NF  IFGI S+N GNQSPSTLPFHWE
Sbjct: 301 THHHHHHHHHHHHPHGVLNFSGIFGISSDNPGNQSPSTLPFHWE 322

[Close]

BLAST of Cp4.1LG20g02930 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.2e-46
Identity = 127/310 (40.97%), Postives = 162/310 (52.26%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLLPFT 123
           RFCQQ   FH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS     + S  HL 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSS-----SSSVPHL- 319

Query: 244 LSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGNQ 303
                         +SL Q       +    FEN+ + S    +         S N   +
Sbjct: 320 ----------LQPPLSLSQEAVETVFYGSGLFENASAVSDGSVI---------SGNEAVR 359

Query: 304 SPSTLPFHWE 309
            P T PFHWE
Sbjct: 380 LPQTFPFHWE 359

[Close]

BLAST of Cp4.1LG20g02930 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.2e-46
Identity = 127/310 (40.97%), Postives = 162/310 (52.26%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLLPFT 123
           RFCQQ   FH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS     + S  HL 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSS-----SSSVPHL- 319

Query: 244 LSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGNQ 303
                         +SL Q       +    FEN+ + S    +         S N   +
Sbjct: 320 ----------LQPPLSLSQEAVETVFYGSGLFENASAVSDGSVI---------SGNEAVR 359

Query: 304 SPSTLPFHWE 309
            P T PFHWE
Sbjct: 380 LPQTFPFHWE 359

[Close]

BLAST of Cp4.1LG20g02930 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.2e-46
Identity = 127/310 (40.97%), Postives = 162/310 (52.26%), Query Frame = 0


Query: 4   STSGSSKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQ 63
           S S SSKR RG   G  Q   CLVDGC+SD SNCR+YH+RHKVC++HSKTP VTI G  Q
Sbjct: 80  SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQ 139

Query: 64  RFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLLPFT 123
           RFCQQ   FH+LEEFDEGKRSCRKRLDGHNRRRRKPQ + + R    F+  QG+ LL F+
Sbjct: 140 RFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFS 199

Query: 124 -SSQVFPPTTLSSHGW-SSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHGG 183
             S VFP T++ +  W +S    +V  N +       + + +V  SS      +  +   
Sbjct: 200 GGSHVFPTTSVLNPSWGNSLVSVAVAANGSS----YGQSQSYVVGSSPAKTGIMFPISSS 259

Query: 184 PTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGHLG 243
           P + R + +    L E     R   +  R    + +SDCALSLLSSS     + S  HL 
Sbjct: 260 PNSTRSIAKQFPFLQEEE-SSRTASLCERMTSCIHDSDCALSLLSSS-----SSSVPHL- 319

Query: 244 LSIIEQEQQQRSAAISLLQPLSHHHHHKLDSFENSESSSVHGAVNFPEIFGIPSENAGNQ 303
                         +SL Q       +    FEN+ + S    +         S N   +
Sbjct: 320 ----------LQPPLSLSQEAVETVFYGSGLFENASAVSDGSVI---------SGNEAVR 359

Query: 304 SPSTLPFHWE 309
            P T PFHWE
Sbjct: 380 LPQTFPFHWE 359

[Close]

BLAST of Cp4.1LG20g02930 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 116.7 bits (291), Expect = 3.3e-26
Identity = 87/239 (36.40%), Postives = 124/239 (51.88%), Query Frame = 0


Query: 4   STSG--SSKRARGAHSG-AIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAG 63
           S+SG  S++R RG  SG + Q   C V+GC  DL+N + Y+ RH+VC +HSKTP+VT+AG
Sbjct: 50  SSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAG 109

Query: 64  LNQRFCQQ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLPRSGGHFSYHQGAHLL 123
           + QRFCQQ   FH L EFD  KRSCR+RL GHN RRRKPQ   L              +L
Sbjct: 110 IEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASL-------------SVL 169

Query: 124 PFTSSQVFPPTTLSSHGWSSAGDPSVFHNQNQELNFLEKQRLFVEPSSYKAAQPLGFLHG 183
                ++ P  +L  +G   AG    F   NQE+ +   + L         + P   ++ 
Sbjct: 170 ASRYGRIAP--SLYENG--DAGMNGSFLG-NQEIGWPSSRTLDTRVMRRPVSSPSWQINP 229

Query: 184 GPTTCRPLLRSINTLSENTGGERNKMVYYRFRVGVSESDCALSLLSSSQQAADNGSSGH 237
                +  +    T   +      K+  Y+   G+ +S+CALSLLS+  Q  DN ++ +
Sbjct: 230 MNVFSQGSVGGGGTSFSSPEIMDTKLESYK---GIGDSNCALSLLSNPHQPHDNNNNNN 267

[Close]

BLAST of Cp4.1LG20g02930 vs. TAIR 10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 113.2 bits (282), Expect = 3.7e-25
Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 9   SKRARGAHSGAIQPVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQRFCQQ 68
           SK++R ++  +  P+ C V GC+ DLS+ +DYH+RH+VCE HSKT  V + GL QRFCQQ
Sbjct: 109 SKKSRASNLCSQNPL-CQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQ 168

Query: 69  ---FHSLEEFDEGKRSCRKRLDGHNRRRRKPQTDLLP 103
              FH L EFD+GKRSCR+RL GHN RRRKP    LP
Sbjct: 169 CSRFHFLSEFDDGKRSCRRRLAGHNERRRKPAFYFLP 204

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g02930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	3.1e-45	40.97	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	3.1e-45	40.97	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q49I55	5.9e-36	41.11	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q49I57	7.6e-36	40.94	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
Q6YZE8	1.7e-35	33.78	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Cp4.1LG20g02930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519233.1	3.91e-226	99.04	squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo]	[more]
XP_022923707.1	1.78e-222	97.75	squamosa promoter-binding-like protein 13A [Cucurbita moschata] >XP_022923708.1 ...	[more]
KAG7019750.1	1.25e-220	97.44	Squamosa promoter-binding-like protein 13B [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6584159.1	3.58e-220	97.12	Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subs...	[more]
XP_023001168.1	3.72e-217	96.14	squamosa promoter-binding-like protein 13A [Cucurbita maxima] >XP_023001169.1 sq...	[more]

BLAST of Cp4.1LG20g02930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAD8	8.64e-223	97.75	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KPQ7	1.80e-217	96.14	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1JZ22	1.00e-160	73.94	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GVH8	2.63e-158	72.16	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5A7UP61	4.60e-135	63.66	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Cp4.1LG20g02930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	2.2e-46	40.97	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	2.2e-46	40.97	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	2.2e-46	40.97	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT2G42200.1	3.3e-26	36.40	squamosa promoter binding protein-like 9	[more]
AT1G69170.1	3.7e-25	57.73	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 25..95 e-value: 3.7E-26 score: 91.2
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 22..96 score: 27.965755
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 16..83 e-value: 1.2E-30 score: 107.4
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 23..101
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 17..95 e-value: 2.1E-33 score: 112.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..308
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 1..308
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 1..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g02930.1	Cp4.1LG20g02930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding