Cp4.1LG20g01630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g01630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DDE Tnp4 domain-containing protein
Location	Cp4.1LG20: 893854 .. 896117 (+)
RNA-Seq Expression	Cp4.1LG20g01630
Synteny	Cp4.1LG20g01630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGACTCATTGCCTCAATTAGAAGCAGAACAGCTGACAGCACACATTGAGACTCCAACTGTGGACATTGCTTTTGAGACAGAAGAACTAGAGATTACATCACAGTTGAGGGATGCTATTGCAACTGAACTGTGGAGTGACTATATTAACGATATATCGCCCATGTAAATCAAATGTATGTTATCGTAGCGTCCGAGTTAGGTCAGATACTCTTCAGGAACACAAAAAATACACAAATGGGGTCTGATTTTGAAGGTGTATATTGACATTACTATGTTCATATGAAAGGAATATAACAGTGGACATTGTTTTTCTTTTTTTCTTTTAGGAAAGTCAAATTCTTGAGTACTGCTGCCAAGGAAACAACACCAGGTTAGCGTTCTTGATGAGATCTGACTGATATTTGTTTGCATTGAGTTGAATTCTGTTGCACATATCAATCTATTTGGCTGTTGATGCAAGGCATTGGGGATGGATCTGAGCTATCTGAATGTGAATGTTTAATATTTGCTTCTTTTTTACTGCTACGTTCATCTGGCTTCCATCTGAAAGTACCCCAAAGTTCCCTACCTCGTGTATGTGGTGGTGCCCCTTGTATGAGGTATAACCGTGCTAGTCAATAGATATTGTCCTCTTTGAACTTTTTCTTTCAGGCTTTTCTTCGAAGTTTTTAAAATGTGTCGATTAAAGAGAGAGGGGAGTGAGGTTTTGGGGTTTTGTGTTTATTGGATTCTCTGACTTCCTCTGCTTCACTGCTCACTCATCACTCATTTTAGATTACTTTTCTTTCTTCTTCCTCATCACTCATTTTAGATTACTTTTCTTTCTTCTTCCTGTCCTCTCTGTCGTCTTCCTTTCCATCTCTGGAATTTTGGGATCATGGGTTTATCTCGTCTCCTTTGTATCTTTCATAAACGTTTCAAAACTATTATCGATTAGGAATTGGACCGGTGTGGTGGCGACCTACACCAGTATAGGTCTCCAACGCAGATTTTAGGTCTCAATTTCGTGTGTTGGGACATTACTGCCCCATCAAATATTTTTTATGATCCATTTATTTATAGTACTTGTATCTTGTAGTTATTGATAGAAACAAATAGAGTATTTAGAATGAAATGTAATATAATAAGGTGTTGTTTGCTTATTACAATTTTGCCCCTTCTGGGTTATGGAAATTACATATAAATGTGTGGAGAGTAGAAAAGTAAGAAGTGAAAAAGTGGAAGGACAAAATTGAGAATAAATAAAAGAAAACAGACACAAAAAGGCTGCACGCACTAACAAATCATTTCAAAACCCATTTCTATTTTCATCGCTCTGTCTCTCAATTTCTTCTTCTTCTCTTCTCATTCAAATTTCAGTCTCGGTTGCTATACCAAGAGACCTTAAGAGATGTTGAATCCGGCCAACGATCTGTTACCGCCGCCGTCGTCTCCGACCAATTCATCCATTTCCTCCTCCGATCTCGACACTGAGGTGCCCATCCTCGCCGTCTCCCATTTTCTGATTCTCTCTCTGTTTTTCATTTTGGGAATTCAATTTTGTTTTGCAGTCTACAGGTTCGTTCTTCCATGACAGGAGCACCAGCTTGGGGACTCTAATGGGTGTTAGTTTCCCGGCGATTACCTTCCGAGTGCCCTCCCAGAACCGAGACCAACACTCCGCCGCGACCGCCGCCGCTGGTGGCGGTTCCCGCAAGAGTAAGAAGCCAAAAAGAAAAACGACGGCAGCGCCGGCACTGGTCGCAGATCGGAAACGGCGGTGGTGGCGGCTATGCAGGGATGACGGTGTTAAGCCGGCGTCTCTGGGCGAGTTTCTTGAGGTGGAACGGAGATTTGGGGACGGTGCTTTCTTCGGCAACGCGGTGGATCTGGAAGGCGTAGTTTCGGCGGATCAGCAGAGGAATGGCCGGTCTTTGTTCGCCGATGGGAGGGTTCTTCCGCCGGCACAAACGGAGGAAGATACGTCCGCGGCCGGCGCTCTATGCCGATTTTCTGTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAAAATGTGGGATTTGATTTGTGAGGGTATATTTAAAATCTTATATTATATTTAATTAATCAAACCCTTGAATTAAGGTGAAAGAAAAAAAGAAAAAAGAAAAAAAAATGTCACCTTTATCGTGTAGGTGACCCTCTTTTTTTTTTTTTTTTTAATTTCCTTTAATCATCTCACAGGTTACTTCTATCTTCTTTTTTTCTTTTTCAAAATAATAATAATAATAATAAAA

mRNA sequence

ATGGAGGACTCATTGCCTCAATTAGAAGCAGAACAGCTGACAGCACACATTGAGACTCCAACTGTGGACATTGCTTTTGAGACAGAAGAACTAGAGATTACATCACAGTTGAGGGATGCTATTGCAACTGAACTGTGGAGTGACTATATTAACGATATATCGCCCATGAAAGTCAAATTCTTGAGTACTGCTGCCAAGGAAACAACACCAGGCATTGGGGATGGATCTGAGCTATCTGAATGTGAATGTTTAATATTTGCTTCTTTTTTACTGCTACGTTCATCTGGCTTCCATCTGAAATCTACAGGTTCGTTCTTCCATGACAGGAGCACCAGCTTGGGGACTCTAATGGGTGTTAGTTTCCCGGCGATTACCTTCCGAGTGCCCTCCCAGAACCGAGACCAACACTCCGCCGCGACCGCCGCCGCTGGTGGCGGTTCCCGCAAGAGTAAGAAGCCAAAAAGAAAAACGACGGCAGCGCCGGCACTGGTCGCAGATCGGAAACGGCGGTGGTGGCGGCTATGCAGGGATGACGGTGTTAAGCCGGCGTCTCTGGGCGAGTTTCTTGAGGTGGAACGGAGATTTGGGGACGGTGCTTTCTTCGGCAACGCGGTGGATCTGGAAGGCGTAGTTTCGGCGGATCAGCAGAGGAATGGCCGGTCTTTGTTCGCCGATGGGAGGGTTCTTCCGCCGGCACAAACGGAGGAAGATACGTCCGCGGCCGGCGCTCTATGCCGATTTTCTGTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAAAATGTGGGATTTGATTTGTGAGGGTATATTTAAAATCTTATATTATATTTAATTAATCAAACCCTTGAATTAAGGTGAAAGAAAAAAAGAAAAAAGAAAAAAAAATGTCACCTTTATCGTGTAGGTGACCCTCTTTTTTTTTTTTTTTTTAATTTCCTTTAATCATCTCACAGGTTACTTCTATCTTCTTTTTTTCTTTTTCAAAATAATAATAATAATAATAAAA

Coding sequence (CDS)

ATGGAGGACTCATTGCCTCAATTAGAAGCAGAACAGCTGACAGCACACATTGAGACTCCAACTGTGGACATTGCTTTTGAGACAGAAGAACTAGAGATTACATCACAGTTGAGGGATGCTATTGCAACTGAACTGTGGAGTGACTATATTAACGATATATCGCCCATGAAAGTCAAATTCTTGAGTACTGCTGCCAAGGAAACAACACCAGGCATTGGGGATGGATCTGAGCTATCTGAATGTGAATGTTTAATATTTGCTTCTTTTTTACTGCTACGTTCATCTGGCTTCCATCTGAAATCTACAGGTTCGTTCTTCCATGACAGGAGCACCAGCTTGGGGACTCTAATGGGTGTTAGTTTCCCGGCGATTACCTTCCGAGTGCCCTCCCAGAACCGAGACCAACACTCCGCCGCGACCGCCGCCGCTGGTGGCGGTTCCCGCAAGAGTAAGAAGCCAAAAAGAAAAACGACGGCAGCGCCGGCACTGGTCGCAGATCGGAAACGGCGGTGGTGGCGGCTATGCAGGGATGACGGTGTTAAGCCGGCGTCTCTGGGCGAGTTTCTTGAGGTGGAACGGAGATTTGGGGACGGTGCTTTCTTCGGCAACGCGGTGGATCTGGAAGGCGTAGTTTCGGCGGATCAGCAGAGGAATGGCCGGTCTTTGTTCGCCGATGGGAGGGTTCTTCCGCCGGCACAAACGGAGGAAGATACGTCCGCGGCCGGCGCTCTATGCCGATTTTCTGTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAA

Protein sequence

MEDSLPQLEAEQLTAHIETPTVDIAFETEELEITSQLRDAIATELWSDYINDISPMKVKFLSTAAKETTPGIGDGSELSECECLIFASFLLLRSSGFHLKSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG

Homology

[Close]

BLAST of Cp4.1LG20g01630 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.8e-31
Identity = 94/195 (48.21%), Postives = 116/195 (59.49%), Query Frame = 0


Query: 94  SSGFHLKSTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQHSAA-TAAAGGGSRK 153
           SS    +STGSFFHDRS +LGTLMG SF A   + FR  S+     S A + A+   +R+
Sbjct: 17  SSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAISRASSSNARR 76

Query: 154 SKKPKRKTTAAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRF 213
           + + KR  + +      R+R+WWR CRDD       G+       K +SLGE+LEVERRF
Sbjct: 77  NHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSLGEYLEVERRF 136

Query: 214 GDGAFFGNA-VDLEGVVSA---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALC 261
           GD A + +A  +LE  V A   DQQ     R+LFADGRVLPPA  E    E T  A +LC
Sbjct: 137 GDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTGEGTPVATSLC 196

[Close]

BLAST of Cp4.1LG20g01630 vs. NCBI nr
Match: TYJ99038.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 347 bits (890), Expect = 4.27e-112
Identity = 206/337 (61.13%), Postives = 220/337 (65.28%), Query Frame = 0


Query: 1   MEDSLPQLEAEQLTAHIETPTVDIAFETEELEITSQLRDAIATELW---------SDYI- 60
           MEDSLPQLEAEQLTA+IETP VD+AFETEELEI SQLRD+IA E+W         S+++ 
Sbjct: 337 MEDSLPQLEAEQLTANIETPIVDVAFETEELEIASQLRDSIAAEIWRKATGVTCKSNHVF 396

Query: 61  ---------------------------NDISPMKVKFLSTAAKETTPGI------GDGSE 120
                                        I P   K +       TP I      G  + 
Sbjct: 397 LRSQAFAFDLLTTCVDGGVLLRWGGASKRILPTYFKSIRIQLSNETPNIISKINSGWLNS 456

Query: 121 LSECECLIFASFLLL----------------------------------RSSGFHLKSTG 180
              C  + FA   LL                                   SS    +STG
Sbjct: 457 DEMCGGVSFAVLYLLDSLTSSASLRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTG 516

Query: 181 SFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSKKPKRKTTAAPAL 240
           SFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AAT  AGGGSRKSKK KRKTT APAL
Sbjct: 517 SFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTTAPAL 576

Query: 241 VADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLF 260
           VADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV+ADQQRNGRSLF
Sbjct: 577 VADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVTADQQRNGRSLF 636

[Close]

BLAST of Cp4.1LG20g01630 vs. NCBI nr
Match: XP_023520118.1 (uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_023520119.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317 bits (812), Expect = 7.38e-107
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 92  LRSSGFHLKSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSK 151
           + SS    +STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSK
Sbjct: 20  ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSK 79

Query: 152 KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 211
           KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV
Sbjct: 80  KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 139

Query: 212 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 260
           SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Sbjct: 140 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Cp4.1LG20g01630 vs. NCBI nr
Match: XP_022924210.1 (uncharacterized protein At3g17950 [Cucurbita moschata] >XP_022924211.1 uncharacterized protein At3g17950 [Cucurbita moschata])

HSP 1 Score: 316 bits (809), Expect = 2.11e-106
Identity = 161/169 (95.27%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 92  LRSSGFHLKSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSK 151
           + SS    +STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AATAAAGGGSRKSK
Sbjct: 20  ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSK 79

Query: 152 KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 211
           KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV
Sbjct: 80  KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 139

Query: 212 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 260
           SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Sbjct: 140 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Cp4.1LG20g01630 vs. NCBI nr
Match: KAG6584313.1 (hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019905.1 hypothetical protein SDJN02_18872 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315 bits (806), Expect = 6.04e-106
Identity = 160/169 (94.67%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 92  LRSSGFHLKSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSK 151
           + SS    +STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AATAAAGGGSRKSK
Sbjct: 20  ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSK 79

Query: 152 KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 211
           KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV
Sbjct: 80  KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 139

Query: 212 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 260
           SADQQRNGRSLFADGRVLPPAQT+EDTSAAGALCRFSVSLTGICSGGAG
Sbjct: 140 SADQQRNGRSLFADGRVLPPAQTDEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Cp4.1LG20g01630 vs. NCBI nr
Match: XP_023001809.1 (uncharacterized protein At3g17950-like [Cucurbita maxima])

HSP 1 Score: 308 bits (790), Expect = 1.64e-103
Identity = 158/169 (93.49%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 92  LRSSGFHLKSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSK 151
           + SS    +STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AAT AAGGGSRKSK
Sbjct: 20  ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATNAAGGGSRKSK 79

Query: 152 KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 211
           KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFF NAVDLEGVV
Sbjct: 80  KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFDNAVDLEGVV 139

Query: 212 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 260
           SADQQRNGR LFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Sbjct: 140 SADQQRNGRYLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Cp4.1LG20g01630 vs. ExPASy TrEMBL
Match: A0A0A0LQI1 (DDE Tnp4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042870 PE=3 SV=1)

HSP 1 Score: 393 bits (1009), Expect = 2.66e-132
Identity = 223/345 (64.64%), Postives = 232/345 (67.25%), Query Frame = 0


Query: 1   MEDSLPQLEAEQLTAHIETPTVDIAFETEELEITSQLRDAIATELWSDYINDISPMKVKF 60
           MEDSLPQLEAEQLTA+IETP VD+AFETEELEITSQLRD+IA E+WSDYINDISPMKV+F
Sbjct: 173 MEDSLPQLEAEQLTANIETPIVDVAFETEELEITSQLRDSIAAEIWSDYINDISPMKVQF 232

Query: 61  LSTAAKETTPGIGDGSELSECECLI---------FASFLLLRSSGFHLK----------- 120
             TAAKE  PG   G         +         F SFLLL S GFHLK           
Sbjct: 233 SRTAAKEALPGKATGVTCKSNHVFLRSRAVFFSTFVSFLLLHSFGFHLKAPQNSIPPVVC 292

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 293 FRSVDNVCHGGCGGVSFAVLYLLDSLTSSASLRERKEMLNPANDLLPPPSSPTNSSISSS 352

Query: 181 -----STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSKKPKR 240
                STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AAT  AGGGSRKSKK KR
Sbjct: 353 DLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKR 412

Query: 241 KTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQ 260
           KTT APALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV+ADQ
Sbjct: 413 KTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQ 472

[Close]

BLAST of Cp4.1LG20g01630 vs. ExPASy TrEMBL
Match: A0A5D3BLI7 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002420 PE=3 SV=1)

HSP 1 Score: 347 bits (890), Expect = 2.07e-112
Identity = 206/337 (61.13%), Postives = 220/337 (65.28%), Query Frame = 0


Query: 1   MEDSLPQLEAEQLTAHIETPTVDIAFETEELEITSQLRDAIATELW---------SDYI- 60
           MEDSLPQLEAEQLTA+IETP VD+AFETEELEI SQLRD+IA E+W         S+++ 
Sbjct: 337 MEDSLPQLEAEQLTANIETPIVDVAFETEELEIASQLRDSIAAEIWRKATGVTCKSNHVF 396

Query: 61  ---------------------------NDISPMKVKFLSTAAKETTPGI------GDGSE 120
                                        I P   K +       TP I      G  + 
Sbjct: 397 LRSQAFAFDLLTTCVDGGVLLRWGGASKRILPTYFKSIRIQLSNETPNIISKINSGWLNS 456

Query: 121 LSECECLIFASFLLL----------------------------------RSSGFHLKSTG 180
              C  + FA   LL                                   SS    +STG
Sbjct: 457 DEMCGGVSFAVLYLLDSLTSSASLRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTG 516

Query: 181 SFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSKKPKRKTTAAPAL 240
           SFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AAT  AGGGSRKSKK KRKTT APAL
Sbjct: 517 SFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTTAPAL 576

Query: 241 VADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLF 260
           VADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV+ADQQRNGRSLF
Sbjct: 577 VADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVTADQQRNGRSLF 636

[Close]

BLAST of Cp4.1LG20g01630 vs. ExPASy TrEMBL
Match: A0A6J1E8Y2 (uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 1.02e-106
Identity = 161/169 (95.27%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 92  LRSSGFHLKSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSK 151
           + SS    +STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AATAAAGGGSRKSK
Sbjct: 20  ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAATAAAGGGSRKSK 79

Query: 152 KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 211
           KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV
Sbjct: 80  KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 139

Query: 212 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 260
           SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Sbjct: 140 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Cp4.1LG20g01630 vs. ExPASy TrEMBL
Match: A0A6J1KNQ0 (uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC111495839 PE=4 SV=1)

HSP 1 Score: 308 bits (790), Expect = 7.95e-104
Identity = 158/169 (93.49%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 92  LRSSGFHLKSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSK 151
           + SS    +STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AAT AAGGGSRKSK
Sbjct: 20  ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATNAAGGGSRKSK 79

Query: 152 KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 211
           KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFF NAVDLEGVV
Sbjct: 80  KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFDNAVDLEGVV 139

Query: 212 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 260
           SADQQRNGR LFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG
Sbjct: 140 SADQQRNGRYLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Cp4.1LG20g01630 vs. ExPASy TrEMBL
Match: A0A1S4DUB1 (uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503240 PE=4 SV=1)

HSP 1 Score: 304 bits (779), Expect = 3.75e-102
Identity = 154/169 (91.12%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 92  LRSSGFHLKSTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHSAATAAAGGGSRKSK 151
           + SS    +STGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AAT  AGGGSRKSK
Sbjct: 20  ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSK 79

Query: 152 KPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFFGNAVDLEGVV 211
           K KRKTT APALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAF+GNAVDLEGVV
Sbjct: 80  KTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVV 139

Query: 212 SADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLTGICSGGAG 260
           +ADQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLTGICSGGAG
Sbjct: 140 TADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLTGICSGGAG 188

[Close]

BLAST of Cp4.1LG20g01630 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-32
Identity = 94/195 (48.21%), Postives = 116/195 (59.49%), Query Frame = 0


Query: 94  SSGFHLKSTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNRDQHSAA-TAAAGGGSRK 153
           SS    +STGSFFHDRS +LGTLMG SF A   + FR  S+     S A + A+   +R+
Sbjct: 17  SSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAISRASSSNARR 76

Query: 154 SKKPKRKTTAAPALVADRKRRWWRLCRDD-------GV-------KPASLGEFLEVERRF 213
           + + KR  + +      R+R+WWR CRDD       G+       K +SLGE+LEVERRF
Sbjct: 77  NHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSLGEYLEVERRF 136

Query: 214 GDGAFFGNA-VDLEGVVSA---DQQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALC 261
           GD A + +A  +LE  V A   DQQ     R+LFADGRVLPPA  E    E T  A +LC
Sbjct: 137 GDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTGEGTPVATSLC 196

[Close]

BLAST of Cp4.1LG20g01630 vs. TAIR 10
Match: AT3G17950.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-23
Identity = 78/172 (45.35%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 117 MGVSFPA---ITFRVPSQNRDQHSAA-TAAAGGGSRKSKKPKRKTTAAPALVADRKRRWW 176
           MG SF A   + FR  S+     S A + A+   +R++ + KR  + +      R+R+WW
Sbjct: 1   MGFSFTATMPMPFRASSRRHVSPSVAISRASSSNARRNHQRKRPPSNSAEPEPHRRRKWW 60

Query: 177 RLCRDD-------GV-------KPASLGEFLEVERRFGDGAFFGNA-VDLEGVVSA---D 236
           R CRDD       G+       K +SLGE+LEVERRFGD A + +A  +LE  V A   D
Sbjct: 61  RFCRDDDDDAAGNGIHRGTGDSKRSSLGEYLEVERRFGDEAVYNSAEAELEDAVVARYQD 120

Query: 237 QQ--RNGRSLFADGRVLPPAQTE----EDTSAAGALCRFSVSLTGICSGGAG 261
           QQ     R+LFADGRVLPPA  E    E T  A +LCRF VSLTGICSGG G
Sbjct: 121 QQPVMGERALFADGRVLPPASAEVVTGEGTPVATSLCRFPVSLTGICSGGGG 172

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g01630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DR24	2.8e-31	48.21	Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV...	[more]

BLAST of Cp4.1LG20g01630 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99038.1	4.27e-112	61.13	putative nuclease HARBI1 [Cucumis melo var. makuwa]	[more]
XP_023520118.1	7.38e-107	95.86	uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_02352011...	[more]
XP_022924210.1	2.11e-106	95.27	uncharacterized protein At3g17950 [Cucurbita moschata] >XP_022924211.1 uncharact...	[more]
KAG6584313.1	6.04e-106	94.67	hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023001809.1	1.64e-103	93.49	uncharacterized protein At3g17950-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG20g01630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQI1	2.66e-132	64.64	DDE Tnp4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042870 PE...	[more]
A0A5D3BLI7	2.07e-112	61.13	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1E8Y2	1.02e-106	95.27	uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 ...	[more]
A0A6J1KNQ0	7.95e-104	93.49	uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC1114958...	[more]
A0A1S4DUB1	3.75e-102	91.12	uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]

BLAST of Cp4.1LG20g01630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17950.1	2.0e-32	48.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G17950.2	1.7e-23	45.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..160
None	No IPR available	PANTHER	PTHR33544:SF15	BNAANNG11020D PROTEIN	coord: 93..260
IPR040344	Uncharacterized protein At3g17950-like	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 93..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g01630.1	Cp4.1LG20g01630.1	mRNA