Cp4.1LG20g01090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g01090
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cleavage stimulating factor 64
Location	Cp4.1LG20: 667866 .. 672285 (+)
RNA-Seq Expression	Cp4.1LG20g01090
Synteny	Cp4.1LG20g01090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTGCAATTTTCTGTCGCCCGAGCCTGAGGGAATCTCTAAACTTCCAGACGAGCAAACGCTACGCTGGGTCTTCAGAGAAACGCCCATTAACTACATACGAACCAAGTTTCGCTGCGCTGTTGGCGAGAAATTGCGAAGGAACAATCTCAGTCCCAATTGGCGTTGGAACGTAGAACATGGCTGGAAAGCAAGTTACCGGCACCGGTCTGCCGGAGAGCATCGCGGGAATGTCGAAGAACCAACTATATGAAATCATGTCTCAAATGAAGGTACTTATCTTTTCTCTCGCTGTCGGAATCTATATTGGTCTGTCCCCCCTCTTCGTCCGCTTTCTGAGTTCGATCTTTGTCTCTGAGCAATGTCCGGATATCGGAGGAATGATTACTGCACTGTTTATTATTATGCAGACACTGATCGAACAGAACCAGCAGCAGGCGAAACAAATCCTTATCCAAAACCCGCTATTGACCAAAGCTCTTTTCCAGGTTTCAATTTTTAGGTTTTTCGTGTCTTGAGAAAAGTTCATTTCATTTACCATTTAGAGCTAGCCAGTTAATCTTCTCTTGGCCAAGTTTTAACAAATAGGGCTGTACGTGAACCGGATTTTGAATAATCGCTAGTGCTTCGAGGAAATTGAATGTGTTTTAGTAATGTGCACACTTGTATAATCTCTTGCGAGGATTAATTTTAATATCTTTTGAAGTAAACCTGTTGGTGGGTCATATTCTTGAAGGAATGGATTTATCTATTCTGGGTGAAATCAAGCAAGTTTTTTAGCATCTCTCTATCTTTCCCAATTGCATTCAAGGACGTGTATTCTTGAAGACGACGAAAGTAGTCTGGAGCACGAGTTTTCTTCTTATTACCCCCTTGGAGACAGCATTGACTGTCAAATGTTTGTATGGCCTACTACAAGCGTCAAGTTTGAGCACTAGATTGTGTAGGCATTTGTTTGTTCAGAATCATTTTTAACAACTAGGCGTGACTGCAAATGTTATTTATAATATTAATTTATGCTCTAGGGTACACTGAGTTATGTGGTTAATAGTCTGGACCCTTTTTACTTGTTAATCAGCACATTTAGAGGTTTTACCTTTAATTCCTCTTTTGATTACTGAAAGTATTATTGATTCTACTGTTTTATCTACCAGGCGCAGATCATGCTTGGAATGGTACGACCGCCTCAGGTAGCGTGCCATTGTTATTCTACTATTTTTCTTTTTCTTTTTTCTGCATTTTCAATCAGCTTATAGGTATACATCTAAGTTATTCTTCTGTTTAGATTCCAAGCGTTCATCCTTCTGCCTCACAGCATTCTCAACCATCAACTCACACAACTCAACAATCAAATATTCAGCCTACTCAAACATCAGCTGCTCAAATAAATTTGCAAGAACAGACAAGTACACCACCTTTGGCCCCTCCTAGAAAACAATATCAGAACCAACCATCAATGCCCGTCTCATCAACTACTCTTCCTACCACTAACATTCAGCCCCGGTCAGCACCTCTGATTCCCCTACAGACACCACAGCATCCCAAGGGATTTGATATGCCCCAGGCAAATCCCAATTCTGCGCCACAACCCTCTCAAATTCCAAATGTACCTCCAATTCTTCCCTCTGCTGCTCAGCCACCTCTACTTCATCAACCCCAGATTTCAACTGCTTCCATCCAGCTGCAGCAGCCATTACAAACAGCTGAGATTCCCCACCTGCCTCCACCGGCACCATTGCCCTCACATTCCAGAGCACCTACGGGTCCAAATTTCCATCAGCACTACCCCCCTCAAATGGGCCACAATATGAATTACCAACCTCCTGGCATCCCACAGCATGTTTCTCAGCCCATATTTCATGTAAGTCGGAGTTTTAGTTTTCAAGCTAAAATTCTCTTTTGGATTTACAGTACACAAATCTCCAAGTGAAAATGATTTCTCAACCTCTCTAATCTATTTTTTAAATGTTCTAGTCAGGTACCAAACTCCCTCCTGGCATGGGAAACTCATTTCCCCCAGGACAGTCGGCACTCCCTAGTCAGCCACCCCCTCAATCAATGTATCAGGTACTTTTTTTTCTTTTTTCTTTTTTACTTGATTACAATGTGTTTATCCTGGAAAATATTGTATAGTAAATATGTCTATCTATGGAATATTTATTGTTTTCAACATTTATAATATTATTCATTTAGTAAGCCATACATGTGGAATTTGCTGTGGGAATGGCAGTTTGGTGGTGGAGTTCTTTTGGGGTTATTGGGGCTTGGAATAGGTTTGGGGGAGGTGGTTTTGCACTCCCCTTTTAGCGAGAAGGGTATAGTGGTGTGGCAAGCAAGCTTCTTTGCCATTTTGTCGGGTAATTGGTTGGAGTGTAATGGTAGGATTTTTAGGGATATGGAGAATTCTAGAGAATAGGTTTAGGAGTTGGTGAGGTTTAATTGTTCCATTTAGACTTAGTTCACTAGAACATTATGTAATTATGATATTGGTCGTGTTCTTTTGGACTAGAGTCATTTTTATAGTTAATGTGTGTTTTTTAGGACTTCTTTTTTGTTCACCTTTGTATTTTTCGTGAAAGTTTGGTTTCCTTCCAAAAAAAAGTTATAGGTTTTTGGTAGAAATTGTTCGTGTTTGCATTTGTCTGATATAGACACAGTTATGCTTTTAATTTTCGGCATAACTAGTTCACTATACCCTTGTGTAACTATGATATCAGTCTGGTTCTTTTAGATTAGAATCATTTTTATAATTAGTGCTTGTTTTTCGAGGGCTTCTTTTTTGTTCACCCTTGTATTCATCATGAAAGTTCGGCTTCTTACCAGAAAAATTGTAAGTTCTTGGTAGAAATTGTTCATGTTTGCATTTGTCATGTGTAGACACAGTTATGCGTTTAATTTTTGGCGTAACCCCTTTAAGACATTAGATGGTGGAACTTGGGTTACCTGAAAGAAAACTATTGTAGCAGTCATAATGTTTGTTCTCTTCTAATCTTTTGGATGTCATAGATAGTCTTGTTAGGTCCTATCTAATGAGAAAGAGGAAGGGGTTTGATATTCTTTGATCTTGCACGGTTCTCTATTGAGTTTCCATTTGTGGATTTGGTACGTGTTAGGCGAGTAAGTATTCTGCATTTTGGATATTACGGAGGACAAACACTTCAAAAGTTTAGTATGAGTGGCATTTGTTGTTTAATTATTCAAAAGTTTTCAACAGGGTTTGCGTATGCAAACTGGTCTTGAGAATGCCATCTACTTGTAGACCAAATTATTTAAGCCATTACAAACAATGTCAAATAACCACAGTATTAGCTGTTTAATGTCTCGTTTGGTGCATATTTCTCTCAGGCTGGAGGTTCTAAATTAGGTACAGAATTCATGAATCAAGTTGGAAGTTCAAAGCCTGCTGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAAAATCCTACACATCCACAGCAACTCGCCGGACCACCACCAATACCATCAGTCCTTGGTCAGATGGCCCCTGGCAATCAGCCTCGTGCTGCACCACCGGTACTTTTCTAATTACTTTCTTTTTTCTGTTTTGAACGACAAGTTTTTCTAATTACTTTCTTTTTTCGACAAGTTCTTCTTTTTCATTTTGTTATTGACCTTTGTCTCTCCCCTCCCTTTTCACCCGATTTTGGTTCAGTTGAGTCAGGAGATGGAGAAGATGTTACTTCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTCCTGCCTCCAGAGCAAAGGAATCAAGTGCTTCAGCTACAGAAGATACTGCGGCAATGAACAATGTTCTTCGGGCAGGATTCTCTTGATTTTCTCCCCTCCCCCTTTGTTAACTCAAAATGGTTTTTAGGCTGCTAGGGGAAGTCTTGTTACTATTGTATTTTTTTGACTTATGCAGATTTGATGTATTACAATTTCAACTTTTTCCGGAGTGTAGACAAACTTTATAAATCAAACTAAAATGTAGAAACTTTGATTTGAGAAGAATTTGTAATGCTTAGAACTATATTGTTAAATTGTCAACATACATTTTTTTTCTTTTTTCTTATTCTTTTTCTTTCTGTGGGCTGTTAGCTTAACAGTTACCGCTGGAAGATTAAAACTCTAACAAATGAAGCGAATTCTGCCCAATTGTTCAGAATAAATAAGAATTCCTATACGAAAATGTATGGACTCAATCTAAATAACATGTACACTTGTATCAGAATCTCCAAATGCATATGCCGAGTCATGATTTGTACAGCAAACTGGTAAGGTCGAGAAGTCTGATGGATCCGATTATTATCCAAATGATCTTCTACTTGAGGAAGGGGATGAGTTGAGAAACTCCTGACCAAGTTCCTTGATCTTGTTTATTAGAAGCATCTGTTCAGTTTCAAGCTGTGCCATATACTCCTCTT

mRNA sequence

ATTTCTGCAATTTTCTGTCGCCCGAGCCTGAGGGAATCTCTAAACTTCCAGACGAGCAAACGCTACGCTGGGTCTTCAGAGAAACGCCCATTAACTACATACGAACCAAGTTTCGCTGCGCTGTTGGCGAGAAATTGCGAAGGAACAATCTCAGTCCCAATTGGCGTTGGAACGTAGAACATGGCTGGAAAGCAAGTTACCGGCACCGGTCTGCCGGAGAGCATCGCGGGAATGTCGAAGAACCAACTATATGAAATCATGTCTCAAATGAAGACACTGATCGAACAGAACCAGCAGCAGGCGAAACAAATCCTTATCCAAAACCCGCTATTGACCAAAGCTCTTTTCCAGGCGCAGATCATGCTTGGAATGGTACGACCGCCTCAGATTCCAAGCGTTCATCCTTCTGCCTCACAGCATTCTCAACCATCAACTCACACAACTCAACAATCAAATATTCAGCCTACTCAAACATCAGCTGCTCAAATAAATTTGCAAGAACAGACAAGTACACCACCTTTGGCCCCTCCTAGAAAACAATATCAGAACCAACCATCAATGCCCGTCTCATCAACTACTCTTCCTACCACTAACATTCAGCCCCGGTCAGCACCTCTGATTCCCCTACAGACACCACAGCATCCCAAGGGATTTGATATGCCCCAGGCAAATCCCAATTCTGCGCCACAACCCTCTCAAATTCCAAATGTACCTCCAATTCTTCCCTCTGCTGCTCAGCCACCTCTACTTCATCAACCCCAGATTTCAACTGCTTCCATCCAGCTGCAGCAGCCATTACAAACAGCTGAGATTCCCCACCTGCCTCCACCGGCACCATTGCCCTCACATTCCAGAGCACCTACGGGTCCAAATTTCCATCAGCACTACCCCCCTCAAATGGGCCACAATATGAATTACCAACCTCCTGGCATCCCACAGCATGTTTCTCAGCCCATATTTCATTCAGGTACCAAACTCCCTCCTGGCATGGGAAACTCATTTCCCCCAGGACAGTCGGCACTCCCTAGTCAGCCACCCCCTCAATCAATGTATCAGGCTGGAGGTTCTAAATTAGGTACAGAATTCATGAATCAAGTTGGAAGTTCAAAGCCTGCTGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAAAATCCTACACATCCACAGCAACTCGCCGGACCACCACCAATACCATCAGTCCTTGGTCAGATGGCCCCTGGCAATCAGCCTCGTGCTGCACCACCGTTGAGTCAGGAGATGGAGAAGATGTTACTTCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTCCTGCCTCCAGAGCAAAGGAATCAAGTGCTTCAGCTACAGAAGATACTGCGGCAATGAACAATGTTCTTCGGGCAGGATTCTCTTGATTTTCTCCCCTCCCCCTTTGTTAACTCAAAATGGTTTTTAGGCTGCTAGGGGAAGTCTTGTTACTATTGTATTTTTTTGACTTATGCAGATTTGATGTATTACAATTTCAACTTTTTCCGGAGTGTAGACAAACTTTATAAATCAAACTAAAATGTAGAAACTTTGATTTGAGAAGAATTTGTAATGCTTAGAACTATATTGTTAAATTGTCAACATACATTTTTTTTCTTTTTTCTTATTCTTTTTCTTTCTGTGGGCTGTTAGCTTAACAGTTACCGCTGGAAGATTAAAACTCTAACAAATGAAGCGAATTCTGCCCAATTGTTCAGAATAAATAAGAATTCCTATACGAAAATGTATGGACTCAATCTAAATAACATGTACACTTGTATCAGAATCTCCAAATGCATATGCCGAGTCATGATTTGTACAGCAAACTGGTAAGGTCGAGAAGTCTGATGGATCCGATTATTATCCAAATGATCTTCTACTTGAGGAAGGGGATGAGTTGAGAAACTCCTGACCAAGTTCCTTGATCTTGTTTATTAGAAGCATCTGTTCAGTTTCAAGCTGTGCCATATACTCCTCTT

Coding sequence (CDS)

ATGGCTGGAAAGCAAGTTACCGGCACCGGTCTGCCGGAGAGCATCGCGGGAATGTCGAAGAACCAACTATATGAAATCATGTCTCAAATGAAGACACTGATCGAACAGAACCAGCAGCAGGCGAAACAAATCCTTATCCAAAACCCGCTATTGACCAAAGCTCTTTTCCAGGCGCAGATCATGCTTGGAATGGTACGACCGCCTCAGATTCCAAGCGTTCATCCTTCTGCCTCACAGCATTCTCAACCATCAACTCACACAACTCAACAATCAAATATTCAGCCTACTCAAACATCAGCTGCTCAAATAAATTTGCAAGAACAGACAAGTACACCACCTTTGGCCCCTCCTAGAAAACAATATCAGAACCAACCATCAATGCCCGTCTCATCAACTACTCTTCCTACCACTAACATTCAGCCCCGGTCAGCACCTCTGATTCCCCTACAGACACCACAGCATCCCAAGGGATTTGATATGCCCCAGGCAAATCCCAATTCTGCGCCACAACCCTCTCAAATTCCAAATGTACCTCCAATTCTTCCCTCTGCTGCTCAGCCACCTCTACTTCATCAACCCCAGATTTCAACTGCTTCCATCCAGCTGCAGCAGCCATTACAAACAGCTGAGATTCCCCACCTGCCTCCACCGGCACCATTGCCCTCACATTCCAGAGCACCTACGGGTCCAAATTTCCATCAGCACTACCCCCCTCAAATGGGCCACAATATGAATTACCAACCTCCTGGCATCCCACAGCATGTTTCTCAGCCCATATTTCATTCAGGTACCAAACTCCCTCCTGGCATGGGAAACTCATTTCCCCCAGGACAGTCGGCACTCCCTAGTCAGCCACCCCCTCAATCAATGTATCAGGCTGGAGGTTCTAAATTAGGTACAGAATTCATGAATCAAGTTGGAAGTTCAAAGCCTGCTGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAAAATCCTACACATCCACAGCAACTCGCCGGACCACCACCAATACCATCAGTCCTTGGTCAGATGGCCCCTGGCAATCAGCCTCGTGCTGCACCACCGTTGAGTCAGGAGATGGAGAAGATGTTACTTCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTCCTGCCTCCAGAGCAAAGGAATCAAGTGCTTCAGCTACAGAAGATACTGCGGCAATGA

Protein sequence

MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQYQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPILPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGTEFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

Homology

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BLAST of Cp4.1LG20g01090 vs. ExPASy Swiss-Prot
Match: Q9M9G6 (Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.7e-08
Identity = 105/385 (27.27%), Postives = 151/385 (39.22%), Query Frame = 0


Query: 15  IAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVH 74
           +A MS++QL EI+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V P  + S  
Sbjct: 171 LAKMSRSQLTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQS-- 230

Query: 75  PSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQYQNQPSMPVSSTTL 134
                  Q  +H T  S+IQ  Q S        Q   PPLA   +Q    P         
Sbjct: 231 ---PNIVQAPSHMT-GSSIQDAQLSG-------QNLLPPLAQRSQQLSRAPH-------- 290

Query: 135 PTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQP-SQIPN-VPPILPSAAQPPLLHQ 194
                             Q+P           S+ QP SQIP  V    PS+  PP   Q
Sbjct: 291 -----------------SQYPV--------QQSSKQPFSQIPQLVAQPGPSSVNPPPRSQ 350

Query: 195 PQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQMGHNMNYQPP-GI 254
            ++  A  Q QQ +  +                                 N+ Y     +
Sbjct: 351 VKVENAPFQRQQVVPAST--------------------------------NIGYSSQNSV 410

Query: 255 PQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGTEFMNQVGSSKP 314
           P +  QP                    S +P Q  P S+ Q GG  +   F  ++    P
Sbjct: 411 PNNAIQP--------------------SQVPHQALPNSVMQQGGQTVSLNFGKRINEGPP 454

Query: 315 ADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEMEKMLLQQVMSL 374
                 M  P +      +     P   V   M P         +S +++  LLQQVM+L
Sbjct: 471 HQS---MNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQAQAPQTHISPDVQSTLLQQVMNL 454

Query: 375 TPEQINLLPPEQRNQVLQLQKILRQ 397
           TPEQ+ LL PEQ+ +VL+LQ+ L+Q
Sbjct: 531 TPEQLRLLTPEQQQEVLKLQQALKQ 454

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BLAST of Cp4.1LG20g01090 vs. NCBI nr
Match: XP_023519984.1 (cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 760 bits (1962), Expect = 2.11e-276
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI
Sbjct: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGT 300
           GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGT
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGT 300

Query: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEM 360
           EFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEM
Sbjct: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

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BLAST of Cp4.1LG20g01090 vs. NCBI nr
Match: XP_022924107.1 (proline-rich protein 36-like [Cucurbita moschata])

HSP 1 Score: 746 bits (1925), Expect = 9.20e-271
Identity = 388/396 (97.98%), Postives = 393/396 (99.24%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVTGTGLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQIPSVHPSASQHSQP THTTQQSNIQPTQTSAAQI+LQEQTSTPPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPPTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANP+SAPQPSQIPNVPPI
Sbjct: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPSSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQ+
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQI 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGT 300
           GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQP PQSMYQAGGSKLGT
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPAPQSMYQAGGSKLGT 300

Query: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEM 360
           EFMNQVGSSKPADRGPWMPGPPENPTHPQQL+GPPPIPSVLGQM PGNQPRAAPPLSQEM
Sbjct: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of Cp4.1LG20g01090 vs. NCBI nr
Match: XP_023000957.1 (cleavage stimulating factor 64 [Cucurbita maxima])

HSP 1 Score: 742 bits (1915), Expect = 3.08e-269
Identity = 387/396 (97.73%), Postives = 391/396 (98.74%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQI+LQEQTSTPPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMPVSS+TLPTTNIQPRSAPLIPLQTPQHPKGFDMPQ NP+SAPQPSQIPNVPPI
Sbjct: 121 YQNQPSMPVSSSTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQTNPSSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASIQLQQPLQTAEI HLPPPAPLPSHSRAPTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEISHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGT 300
           GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSF PGQSALPSQPPPQSMYQAGGSKLGT
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFAPGQSALPSQPPPQSMYQAGGSKLGT 300

Query: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEM 360
           EFMNQV SSKPADRGPWMPGPPENPTHPQQL+GPPPIPSVLGQM PGNQPRAAPPLSQEM
Sbjct: 301 EFMNQVASSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of Cp4.1LG20g01090 vs. NCBI nr
Match: KAG7019946.1 (Cleavage stimulating factor 64 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 738 bits (1904), Expect = 1.35e-267
Identity = 386/396 (97.47%), Postives = 392/396 (98.99%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVTGTGLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQIPSVHPSASQHSQP THTTQQSNIQPTQTSAAQI+LQEQTSTPPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPPTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANP+SAPQPSQIPNVPPI
Sbjct: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPSSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQ+
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQI 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGT 300
           GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQS+  AGGSKLGT
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSL--AGGSKLGT 300

Query: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEM 360
           EFMNQVGSSKPADRGPWMPGPPENPTHPQQL+GPPPIPSVLGQM PGNQPRAAPPLSQEM
Sbjct: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 394

[Close]

BLAST of Cp4.1LG20g01090 vs. NCBI nr
Match: XP_008458086.1 (PREDICTED: extensin [Cucumis melo])

HSP 1 Score: 679 bits (1753), Expect = 1.59e-244
Identity = 358/398 (89.95%), Postives = 373/398 (93.72%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV+G GLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQ+PS+ PSASQHSQPST  TQQSN+QPTQTSA QI+LQEQTS PPLAPPRKQ
Sbjct: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMP+SSTTLPT NIQPR  PLIPLQTPQHPKGFD+PQANP S PQPSQIP+V PI
Sbjct: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTAS+QLQQPLQTAE+ HLPP APLP HSR PTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPP-QSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQP+FHSGTKLPPG+GNSFP GQS LPSQPPP QSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300

Query: 301 TEFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLG-QMAPGNQPRAAPPLSQ 360
           TEFMNQVG+SKPADRGPWMPGPPENPT PQQL+GPPPIPSV G QM P NQPR APPLSQ
Sbjct: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of Cp4.1LG20g01090 vs. ExPASy TrEMBL
Match: A0A6J1E818 (proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111431641 PE=4 SV=1)

HSP 1 Score: 746 bits (1925), Expect = 4.46e-271
Identity = 388/396 (97.98%), Postives = 393/396 (99.24%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVTGTGLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQIPSVHPSASQHSQP THTTQQSNIQPTQTSAAQI+LQEQTSTPPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPPTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANP+SAPQPSQIPNVPPI
Sbjct: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPSSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQ+
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQI 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGT 300
           GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQP PQSMYQAGGSKLGT
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPAPQSMYQAGGSKLGT 300

Query: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEM 360
           EFMNQVGSSKPADRGPWMPGPPENPTHPQQL+GPPPIPSVLGQM PGNQPRAAPPLSQEM
Sbjct: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of Cp4.1LG20g01090 vs. ExPASy TrEMBL
Match: A0A6J1KF43 (cleavage stimulating factor 64 OS=Cucurbita maxima OX=3661 GN=LOC111495242 PE=4 SV=1)

HSP 1 Score: 742 bits (1915), Expect = 1.49e-269
Identity = 387/396 (97.73%), Postives = 391/396 (98.74%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQI+LQEQTSTPPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMPVSS+TLPTTNIQPRSAPLIPLQTPQHPKGFDMPQ NP+SAPQPSQIPNVPPI
Sbjct: 121 YQNQPSMPVSSSTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQTNPSSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASIQLQQPLQTAEI HLPPPAPLPSHSRAPTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEISHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGT 300
           GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSF PGQSALPSQPPPQSMYQAGGSKLGT
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFAPGQSALPSQPPPQSMYQAGGSKLGT 300

Query: 301 EFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEM 360
           EFMNQV SSKPADRGPWMPGPPENPTHPQQL+GPPPIPSVLGQM PGNQPRAAPPLSQEM
Sbjct: 301 EFMNQVASSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of Cp4.1LG20g01090 vs. ExPASy TrEMBL
Match: A0A1S3C700 (extensin OS=Cucumis melo OX=3656 GN=LOC103497597 PE=4 SV=1)

HSP 1 Score: 679 bits (1753), Expect = 7.72e-245
Identity = 358/398 (89.95%), Postives = 373/398 (93.72%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV+G GLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQ+PS+ PSASQHSQPST  TQQSN+QPTQTSA QI+LQEQTS PPLAPPRKQ
Sbjct: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMP+SSTTLPT NIQPR  PLIPLQTPQHPKGFD+PQANP S PQPSQIP+V PI
Sbjct: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTAS+QLQQPLQTAE+ HLPP APLP HSR PTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPP-QSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQP+FHSGTKLPPG+GNSFP GQS LPSQPPP QSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300

Query: 301 TEFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLG-QMAPGNQPRAAPPLSQ 360
           TEFMNQVG+SKPADRGPWMPGPPENPT PQQL+GPPPIPSV G QM P NQPR APPLSQ
Sbjct: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of Cp4.1LG20g01090 vs. ExPASy TrEMBL
Match: A0A0A0LQD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042320 PE=4 SV=1)

HSP 1 Score: 674 bits (1738), Expect = 1.49e-242
Identity = 357/398 (89.70%), Postives = 371/398 (93.22%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV+G GLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQ+PS+ PSASQHSQPST  TQQSN+QPTQTSA QI+LQEQTS PPLAP RKQ
Sbjct: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPSRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMP+SSTTLPT NIQPR  PLIPLQTPQHPKGFD+PQANP S PQPSQIP+V PI
Sbjct: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDIPQANPISVPQPSQIPSVSPI 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTAS+QLQQPLQTAEI HLPP A LP HSR PTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEIHHLPPQAQLPPHSRPPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPP-QSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQP+FHSGTKLPPG+GNSFP GQS LPSQPPP QSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300

Query: 301 TEFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLG-QMAPGNQPRAAPPLSQ 360
           TEFMNQVG+SKPADRGPWMPGPPENPT PQQL+GPPPIPSV G QM P NQPR APPLSQ
Sbjct: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of Cp4.1LG20g01090 vs. ExPASy TrEMBL
Match: A0A6J1C742 (RNA-binding protein 33 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008603 PE=4 SV=1)

HSP 1 Score: 671 bits (1731), Expect = 1.55e-241
Identity = 353/397 (88.92%), Postives = 371/397 (93.45%), Query Frame = 0


Query: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV GTGLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120
           MLGMVRPPQIPS+ PS S HSQPSTHTT QSNIQPTQT A QI+LQEQT+ PPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSIQPSTSHHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRKQ 120

Query: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180
           YQNQPSMP+SSTTLPT N+QP+SAPLIPLQTPQHPKGF+M QANP S PQPSQ+P+VPP+
Sbjct: 121 YQNQPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPV 180

Query: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTAS+QLQQPLQTAEIPHLP  APLP  SRAPTGPNFHQHYP Q+
Sbjct: 181 LPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQV 240

Query: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPP-GQSALPSQPPPQSMYQAGGSKLG 300
           GHNMNYQP GIPQHVSQP+FHSGTKLPPG+GNSFPP GQSA+PSQPPPQSMYQAGGSKLG
Sbjct: 241 GHNMNYQPAGIPQHVSQPMFHSGTKLPPGIGNSFPPQGQSAVPSQPPPQSMYQAGGSKLG 300

Query: 301 TEFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQE 360
           TEFMNQVG+SKPADRGPWMPGPPENPT PQQL+GPPP  SV GQM PGNQPR APPLSQE
Sbjct: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPP--SVPGQMGPGNQPRPAPPLSQE 360

Query: 361 MEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396
           MEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Sbjct: 361 MEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 395

[Close]

BLAST of Cp4.1LG20g01090 vs. TAIR 10
Match: AT1G73840.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 237.3 bits (604), Expect = 2.2e-62
Identity = 199/410 (48.54%), Postives = 240/410 (58.54%), Query Frame = 0


Query: 1   MAGKQVTGT-GLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQ 60
           MAGKQ+ G  GLP ++AGM+K+QLY+IMSQMKTLI+QN QQA++ILI+NPLLTKALFQAQ
Sbjct: 1   MAGKQIGGDGGLPANLAGMTKSQLYDIMSQMKTLIDQNHQQAREILIRNPLLTKALFQAQ 60

Query: 61  IMLGMVRPPQI-PSVHPSASQHSQPSTHT-TQQSNIQPTQTS-AAQINLQEQTST-PPLA 120
           IMLGMV+PPQ+ P V P A Q  Q S  +   + N+Q   +S     ++ E  +T  P A
Sbjct: 61  IMLGMVQPPQVTPKVEPQAVQQPQQSHQSIPPKPNVQAHMSSFQGGGSVHEPANTMQPQA 120

Query: 121 PPRKQYQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIP 180
           P RK    QP MP+     P  ++   SA   P  +    +G   P     S PQ SQ+ 
Sbjct: 121 PIRKHPTPQP-MPMPP---PPPSVSANSAQSQPRFSHPQRQGHLNPAVTSMSHPQSSQVQ 180

Query: 181 NVPPIL---PSAAQPPLLHQPQISTASIQL-QQPLQTAEIPHLPPPAPLPSHSRAPTGPN 240
           N PP     P++ QPP  H   I  +S QL QQP+ +   PH+      P H        
Sbjct: 181 NAPPPASHHPTSQQPP-FHHLDIPASSTQLQQQPMHSGGGPHVAQQQSRPYH-------- 240

Query: 241 FHQHYPPQMGHNMNYQPPGIP-QHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSM 300
            HQ+   Q G N  +Q  G P QH+SQP++HSG + P   G  FP GQ  LPSQP     
Sbjct: 241 -HQYGQAQTGPNTGFQHHGAPTQHLSQPMYHSGNRPPASGGPQFPQGQPHLPSQP----T 300

Query: 301 YQAGGSKLGTEFMNQVGSSKPADRGP-WMPGPPE--NPTHPQQLAGPPPIPSVLGQMAPG 360
           YQ GG   G    NQ+      DRGP WM G  E  N TH   L GP P PS   Q+ PG
Sbjct: 301 YQGGGQYRGDYNNNQLAGLMAQDRGPSWMAGQSESSNITHLPGL-GPVPPPS---QVGPG 360

Query: 361 NQPRAAP-PLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 397
             P   P P+S EMEK LLQQVMSLTPEQINLLPPEQRNQVLQLQ+ILRQ
Sbjct: 361 GGPPPRPAPISAEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQILRQ 388

[Close]

BLAST of Cp4.1LG20g01090 vs. TAIR 10
Match: AT1G71800.1 (cleavage stimulating factor 64 )

HSP 1 Score: 59.7 bits (143), Expect = 6.2e-09
Identity = 105/385 (27.27%), Postives = 151/385 (39.22%), Query Frame = 0


Query: 15  IAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIPSVH 74
           +A MS++QL EI+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V P  + S  
Sbjct: 171 LAKMSRSQLTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQS-- 230

Query: 75  PSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQYQNQPSMPVSSTTL 134
                  Q  +H T  S+IQ  Q S        Q   PPLA   +Q    P         
Sbjct: 231 ---PNIVQAPSHMT-GSSIQDAQLSG-------QNLLPPLAQRSQQLSRAPH-------- 290

Query: 135 PTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQP-SQIPN-VPPILPSAAQPPLLHQ 194
                             Q+P           S+ QP SQIP  V    PS+  PP   Q
Sbjct: 291 -----------------SQYPV--------QQSSKQPFSQIPQLVAQPGPSSVNPPPRSQ 350

Query: 195 PQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQMGHNMNYQPP-GI 254
            ++  A  Q QQ +  +                                 N+ Y     +
Sbjct: 351 VKVENAPFQRQQVVPAST--------------------------------NIGYSSQNSV 410

Query: 255 PQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPPQSMYQAGGSKLGTEFMNQVGSSKP 314
           P +  QP                    S +P Q  P S+ Q GG  +   F  ++    P
Sbjct: 411 PNNAIQP--------------------SQVPHQALPNSVMQQGGQTVSLNFGKRINEGPP 454

Query: 315 ADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQEMEKMLLQQVMSL 374
                 M  P +      +     P   V   M P         +S +++  LLQQVM+L
Sbjct: 471 HQS---MNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQAQAPQTHISPDVQSTLLQQVMNL 454

Query: 375 TPEQINLLPPEQRNQVLQLQKILRQ 397
           TPEQ+ LL PEQ+ +VL+LQ+ L+Q
Sbjct: 531 TPEQLRLLTPEQQQEVLKLQQALKQ 454

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g01090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9G6	8.7e-08	27.27	Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV...	[more]

BLAST of Cp4.1LG20g01090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519984.1	2.11e-276	100.00	cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]	[more]
XP_022924107.1	9.20e-271	97.98	proline-rich protein 36-like [Cucurbita moschata]	[more]
XP_023000957.1	3.08e-269	97.73	cleavage stimulating factor 64 [Cucurbita maxima]	[more]
KAG7019946.1	1.35e-267	97.47	Cleavage stimulating factor 64 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008458086.1	1.59e-244	89.95	PREDICTED: extensin [Cucumis melo]	[more]

BLAST of Cp4.1LG20g01090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E818	4.46e-271	97.98	proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111431641 PE=4 ...	[more]
A0A6J1KF43	1.49e-269	97.73	cleavage stimulating factor 64 OS=Cucurbita maxima OX=3661 GN=LOC111495242 PE=4 ...	[more]
A0A1S3C700	7.72e-245	89.95	extensin OS=Cucumis melo OX=3656 GN=LOC103497597 PE=4 SV=1	[more]
A0A0A0LQD8	1.49e-242	89.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042320 PE=4 SV=1	[more]
A0A6J1C742	1.55e-241	88.92	RNA-binding protein 33 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008603...	[more]

BLAST of Cp4.1LG20g01090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73840.1	2.2e-62	48.54	hydroxyproline-rich glycoprotein family protein	[more]
AT1G71800.1	6.2e-09	27.27	cleavage stimulating factor 64	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025742	Cleavage stimulation factor subunit 2, hinge domain	PFAM	PF14327	CSTF2_hinge	coord: 15..72 e-value: 3.8E-16 score: 59.3
None	No IPR available	GENE3D	1.25.40.630		coord: 5..73 e-value: 1.2E-5 score: 27.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..147
None	No IPR available	PANTHER	PTHR47866	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 1..396
IPR038192	Transcription termination and cleavage factor, C-terminal domain superfamily	GENE3D	1.10.20.70		coord: 356..396 e-value: 2.2E-12 score: 48.2
IPR026896	Transcription termination and cleavage factor, C-terminal domain	PFAM	PF14304	CSTF_C	coord: 364..393 e-value: 4.8E-9 score: 35.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g01090.1	Cp4.1LG20g01090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031124	mRNA 3'-end processing
biological_process	GO:0035194	post-transcriptional gene silencing by RNA
biological_process	GO:0009749	response to glucose
cellular_component	GO:0005634	nucleus