Cp4.1LG19g11710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g11710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	50S ribosomal protein L13
Location	Cp4.1LG19: 4828980 .. 4834216 (-)
RNA-Seq Expression	Cp4.1LG19g11710
Synteny	Cp4.1LG19g11710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTAAGCTACAGAAACGAAGCAAGTTTGTCTCTGGGATTGTCGTATTTCACAGGTTTGCTTTCTATAGTCTTTATTCCGGATTCTAGTGAATTATTTCGTTTGTTAATTGTTAAGAATTGAGTGAACTGATAAATTTCTTCGTGGAACAGTGAAGAAGCTAGGAATTTGAGAAATGGCAAGCCAAGTAGCTAGTACTTTCAATGGCAACATGAAGGCAATGCTCCTTTACTTTTACTCTAGTGCTTATTAATCATTGGAATGATTGTGTGATGCATATTGTAGTTCCTTACGTATTAGAAATTGGCTTCTTATTTGCTGCACGCCAAGTGTATGTAGAATTTATTTGTGGATTTTCTTTTCGTTTCTGTTGCAATCTATTGATGAGTTTGTGAAATTTGTTTATTTTTTTCGTTTGGAGTGTCATTAAGTTGTGGTTGTGATTATGTGTGTTATTGTATAGTTGGTTTTGAAAATGATACAGTGTCTAGTAGTTCTTGTTACATAATCTCATGCCACTGTTAGAGGAAATGTTTATTTGGAAACTCAGGTACACCTGTCTGTGTACTTTAATTGATAAGGGACGTTGAATTAATAAATTATGGACACTCAGAAGTCTTGTAGGCAATTTATTGTAGTTTGGACGACATGCTTTGAAATTTTAGGTTAATATGGTCAATATTTTGTTTTGTGTTTGATGTGTTATGTGCTGTGTTTAATTGACAAGTTATTTTATCTTGGACAAGTGGGATTTTGGCATGGCAACATCATAAAAAGGAGTAGGACACCCCTCCGAGTGGGCTAGAGATTCTATAGTGGACTATTTGGTATTCCATTTTTAAGAACAATTACGGGTTTTCAATTTGGATGATTCATGAAGGAAAGTTTATATAGTAGCTGAAGAAGCATTTGGGTTCAATTACTTCAATTATGTTTTTCTAATAAGAAACAAAACTTTTCATTGAAAAAATGAAAAGAGACTTGTGCTTAAAAGATACAAACTATAAAAGGGAGCGAAAAAAGGAAATAAAAGTTACAATGGATGCTGCAAAACCAAATGAGGCAAAAAATCTTGAAAAAATATCCAGCCAGTAGATTGGAAAGAGCATACTAAGTAGAGGCGAACAAACAAATTGAGCCAAACCAAACTATAAGCATAAATTGAGCCAGAAAGCATGAACAACAAAAGAGCATTGAAAGGACTGATGATTGCCAAAATGCTAAGAGGACGAAGAAGAATAAACCAACTACAATGAAAGGCTGAGATCCCCTCTACTTCAATAGAAAAATGCTAAAACAAGGGACATTCCAAAATAAAATCTTCGACCAATGACCAAATGCAAAGCAACTAAAATCTTGCCAATGGCAGCAACAAGAAAACCCGCCAACCACTTTCAAAGTCCATAAGAACTTAATAAATGTAGCATCAAGATTAAATCTTAACTTGAGGAGACAAAGGATGAATTTCTTTCATCTACAATCCAATACCTTTATTGAAGATGAAAACTTGGGAGGAACTGAACTGATCCTTGCAACTGGTGTTAAAGATTGATTACAGAATGTTCTTGGCTCTACACTGCTCAAACTAATTTCAGATTCATCTTCAGAATCAATATCATTCATACAAGAATGGAGGACAATATCCTTTGGACGAGATTCGCCTTTAATTTAGTTATCATTGGACCCTCGAGGGGAAATTATTGATTGGCTGAATGAATTAGAAGAACAAGGCATCTGTTGGTTCAGCTGCTTATCATGAGGCAATAATTCCTGATTAGTAGGAATGAGCAGCCTTACACAAAATTCTTCAAAAATATTAGCATTAAGATTTGAATATTCTTTAGAGAGAGAAGGGGCCTTCATCCGAGAATAATAAAAGAGGAAATGAGTCTTTAAAAATAGAAAGCTTATGAGATTCCTTAGAAACTCAAGGGACAACTTGGGAGGGCTGAGTGGAAATATCATCAACATTTACTTCATCCTTAGGGGTTACCTTATTATCATCCTTAAAGATAGAGAGTTGACTGATCAGACACTTCATTAGTTATGACAAACCGGCATTAGTGGGATGATGATTGGTCGTACTAATAATTTTTACGACATTCTAATTTTCTGGTTGGGCAATAGAGTCAGTTGACTTACGAAATGCTAGTGATTCAAGAGTTGGGGCCTTTGAAATGCAATTCTCGTTTAATCAACCTCCTCAACATGCAGTCAAGGAGTATTACATATTAAATACAATCTCTCTTGAGTGATTAATAGGTGTTCCAACCCTGAACAAAAGAAGTCTCTTTAATACCTGATGTTTCTGGAACAGATTCCAAAACGTATGATTCTACTTCCAAACCATGCTAATAAGTCACATTAATAGCTACATCCTCTATCCTTTTAAATGCTTCTTCGCTTGAATTGGTATCGGATTCACACCCTTATCAAATGGTTCATTAGGTAATACTTCAACCTCGTCTTCTGGTGAAAGTAATGCGCACTGCCAACGCAACTTTTTCATCTTCTATTACGGATTGAACTCGGAAAAAGTCAAATGGAATCCTATAGTCACAAAGATCCAAATTTCTTTAAAATGGAATCGAAATTGAGGGTGAATCAATAGTTACAATATTCCCAAAATTAAGAGAAGTGTCGCTCCTTACCTTGCCTTGAATTTTGATCATCGCTGGAACGAAGCCACATGAATTTTTCTTTACTTCAATATATGCCGCTTCATAATCTATCATATTAAGAGTTTTGGATAGATTCCAATCAGTCCACCAAAATACACCCTAATTGCTTCAAAGGTGGCTCTGTTCCAGTATTGCAAAGGTAGTTCAATATCTTTCATCTATAACCCCACCCTAAATTTTAGCTTTTTGAAAGACCAATATTCAAACTTCATTTGAAGTGGATATATATTTATCCATTTACCTTCTGTCCCAAGATCACCCCTAAAAGTCTGTCATCCTACATTTGCAAAAGAGCCTTATCAGCCATGAACGGATTTATCACAAAAGTAGCCTAAAAAACTGTTCAATTTCCTTTTCCATATCTTCCATCTATCATGGGATTCAGACGTGAAGTTGTCAATAAAAGCACTCAAATCAAGGCTTGCCACGTTTTCTTCTTTCACCCCAAAACTCATTTCTACTAAGAGGTGAAGATCTTGTAGAAACTGGTAACCTCGTAGAGACTGCTTCCTCTATTCTCTGCTTCCCATCCGAGATCTTACTCACAAAATTTGCATAAGCGACGTTCAATTTATGATTATCATTCATGATGGCATAAACACTGCATACAAAGTTCAACGGACTTGTTAATTTGAGTTGTTGCTATATGCATACATTGTGTAAAAGGAGAAGTGAAGACTTAAAATTCTATATTGTGTTCATGTACTTCTAAACACTTTCCAATGATCGAAGGATCATGTTTTCATGGTTGAAAAAGTTGTTTAGGGATATGGGGGGTTTATTTTGGCACTTCGGTTTCCTGATGTTATGTGGTATATTTGATTGGAAAGAAAGAAACTTTTTATTTGGTCGAAAGTTCATCACCCAGGAACTTTGGTAAGAATGAAATAGGAAGGCTGTTGTAGCGGAGGATTTATTTTCTCTTATTTTTGGGGGTTTTTACAAATAAGTTTTTTTTTATAATAGCCTCTGCTTAGTGTTCTTTGGATAAATACTTCTGTTACTTATGGGTACACAAGCATTAATATTGTTATGCCCTAATAATTTTCCAGAGAGCACTTGCTGGAATAAAACGCATCAATTTGGAAGGTCTGAGGTGGAGAGTGTTTGACGCCAAAGGCCAGGTTAGAATGCAATGTTGATCACTTAACGTTTGGTTTTGCAGATTATGAGATAGTATGTCCAATGGTAGTGATATTTGCCATAAACAGAAACAGCTATTCTAATTCTTTCTACCAGGTTCTTGGAAGATTGGCATCTCAAATATCTACCGTGATTCAAGGCAAGGATAAGCCAACATACGCACCAAATCGGGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCTATGTCTCAGGAAGAAAGCCCACTGATAAAATTTATTACTGGCATACTGGGTAAGTACTCTATTTTGTTGGTCATGGACATGAAATCATAAGTTTGTTTGTTAGTTCTTTATCTTCATAAAGATTAGAACAACATTTGTTTTGGTGAATTTGAGCTGCCGGTTGAATCTAAATGGCTCAATTTCTAGCTGCCAAAAAGTAGAGGAAGGGGATCATTTTAATGTTGATTTGGTAATAATTTGTTATGCACTGTGTTTCGTGCTTTGTTTTGAACTATGCGTGGCTTGTAGGTATGTTGGCCATGTCAAGGAAAGAAGTTTGAAAGATCAGATGGCCAAAGACCCTACCGAAGTCATACGTAAAGCTGTATTGCGCATGCTGCCACGAAACAAACTGCGTGATGTCAGTTCTTAAATTCATTTAGTGTTTCACAATTTCTGATACCTAATGAATTAACTACAGTTCTTGATAAAATCTGCATTCTTTTAGTTAGTCATTGTTCAGGTATCTTATATTTGAAGCTTTATTTATTCTATTACATTACATGGATGTAGGATAGAGATCGAAAACTGAGAATTTTTGCTGGAGATGAACACCCATTTGGCGACCGACCACTCGAGCCATATATCATGCCACCTCGTAATGTAAGAGAGATGCGTCCACGTGCAAGACGAGCCATGATTCGAGCACAAAAAAAGGCAGAACAACAACAAAATGGCGACAATCATTCCAAGAAAAATCGAAAGAAGGAAGAAAAGGTAGAAGAAGTGATTGCATAAACAGGACCTAATTTCTTCCATCCCAGTGGAGTTTGTTTGGATCATATAATCAGCCATGGCATAGCTGAAGTAGTCTGGAACTCACTCATTTAGTTGCATCAAAGCTGGCTTTAAATTTGGTTGTAGCTTTGGATTTGATATCATTTGTAAAGTTATGATGTCATGTTTTCTTCAATGCCTGAATTTCCATGGGAGCTTGTTTTATTTTCTTTGAGATTCATATCTTTTGCTTGAATGCAATGGATCAGTTATCTATTATCGTTATAAATTAATAATCACTCCAAATTAGGCTTTCTCAAATTTGAGTCAAATATAAATTTATTCTCTGAATTTTTATCTTTGCATAATAGGTTTTGAATTTTAAATTTTTAAACAAAATCCCTAAACCCAAACTATTTTCCAGTTTTGACCTTAAAATGT

mRNA sequence

ATGTCTACAGAAACGAAGCAAGTTTGTCTCTGGGATTGTCGTATTTCACAGAGAGCACTTGCTGGAATAAAACGCATCAATTTGGAAGGTCTGAGGTGGAGAGTGTTTGACGCCAAAGGCCAGGTTCTTGGAAGATTGGCATCTCAAATATCTACCGTGATTCAAGGCAAGGATAAGCCAACATACGCACCAAATCGGGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCTATGTCTCAGGAAGAAAGCCCACTGATAAAATTTATTACTGGCATACTGGGTATGTTGGCCATGTCAAGGAAAGAAGTTTGAAAGATCAGATGGCCAAAGACCCTACCGAAGTCATACGTAAAGCTGTATTGCGCATGCTGCCACGAAACAAACTGCGTGATGATAGAGATCGAAAACTGAGAATTTTTGCTGGAGATGAACACCCATTTGGCGACCGACCACTCGAGCCATATATCATGCCACCTCGTAATGTAAGAGAGATGCGTCCACGTGCAAGACGAGCCATGATTCGAGCACAAAAAAAGGCAGAACAACAACAAAATGGCGACAATCATTCCAAGAAAAATCGAAAGAAGGAAGAAAAGGTAGAAGAAGTGATTGCATAAACAGGACCTAATTTCTTCCATCCCAGTGGAGTTTGTTTGGATCATATAATCAGCCATGGCATAGCTGAAGTAGTCTGGAACTCACTCATTTAGTTGCATCAAAGCTGGCTTTAAATTTGGTTGTAGCTTTGGATTTGATATCATTTGTAAAGTTATGATGTCATGTTTTCTTCAATGCCTGAATTTCCATGGGAGCTTGTTTTATTTTCTTTGAGATTCATATCTTTTGCTTGAATGCAATGGATCAGTTATCTATTATCGTTATAAATTAATAATCACTCCAAATTAGGCTTTCTCAAATTTGAGTCAAATATAAATTTATTCTCTGAATTTTTATCTTTGCATAATAGGTTTTGAATTTTAAATTTTTAAACAAAATCCCTAAACCCAAACTATTTTCCAGTTTTGACCTTAAAATGT

Coding sequence (CDS)

ATGTCTACAGAAACGAAGCAAGTTTGTCTCTGGGATTGTCGTATTTCACAGAGAGCACTTGCTGGAATAAAACGCATCAATTTGGAAGGTCTGAGGTGGAGAGTGTTTGACGCCAAAGGCCAGGTTCTTGGAAGATTGGCATCTCAAATATCTACCGTGATTCAAGGCAAGGATAAGCCAACATACGCACCAAATCGGGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCTATGTCTCAGGAAGAAAGCCCACTGATAAAATTTATTACTGGCATACTGGGTATGTTGGCCATGTCAAGGAAAGAAGTTTGAAAGATCAGATGGCCAAAGACCCTACCGAAGTCATACGTAAAGCTGTATTGCGCATGCTGCCACGAAACAAACTGCGTGATGATAGAGATCGAAAACTGAGAATTTTTGCTGGAGATGAACACCCATTTGGCGACCGACCACTCGAGCCATATATCATGCCACCTCGTAATGTAAGAGAGATGCGTCCACGTGCAAGACGAGCCATGATTCGAGCACAAAAAAAGGCAGAACAACAACAAAATGGCGACAATCATTCCAAGAAAAATCGAAAGAAGGAAGAAAAGGTAGAAGAAGTGATTGCATAA

Protein sequence

MSTETKQVCLWDCRISQRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKNRKKEEKVEEVIA

Homology

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy Swiss-Prot
Match: A9WH96 (50S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) OX=324602 GN=rplM PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-31
Identity = 66/127 (51.97%), Postives = 87/127 (68.50%), Query Frame = 0


Query: 33  WRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIYVSGRKPTDKIY 92
           W V DA G+VLGRLA+QIST+++GK KPT+ P+ D GD  IV+NA+ I ++GRKP  KIY
Sbjct: 15  WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPDQKIY 74

Query: 93  YWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGDEHPFGD 152
           Y HTGY G +K    K  +AK P  ++R AV RMLP+N++      KLRI+AG  HP   
Sbjct: 75  YRHTGYPGGIKATPYKMMLAKHPDRILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHPHAA 134

Query: 153 RPLEPYI 160
           +  +PYI
Sbjct: 135 QQPKPYI 141

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy Swiss-Prot
Match: B9LJG2 (50S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) OX=480224 GN=rplM PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-31
Identity = 66/127 (51.97%), Postives = 87/127 (68.50%), Query Frame = 0


Query: 33  WRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIYVSGRKPTDKIY 92
           W V DA G+VLGRLA+QIST+++GK KPT+ P+ D GD  IV+NA+ I ++GRKP  KIY
Sbjct: 15  WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPDQKIY 74

Query: 93  YWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGDEHPFGD 152
           Y HTGY G +K    K  +AK P  ++R AV RMLP+N++      KLRI+AG  HP   
Sbjct: 75  YRHTGYPGGIKATPYKMMLAKHPDRILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHPHAA 134

Query: 153 RPLEPYI 160
           +  +PYI
Sbjct: 135 QQPKPYI 141

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy Swiss-Prot
Match: B8G6P5 (50S ribosomal protein L13 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) OX=326427 GN=rplM PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.5e-31
Identity = 66/127 (51.97%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 33  WRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIYVSGRKPTDKIY 92
           W V DA G+VLGRLA+QIST+++GK KPT+ P+ D GD  IV+NA+ I ++GRKP  KIY
Sbjct: 15  WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPEQKIY 74

Query: 93  YWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGDEHPFGD 152
           Y H+GY G +KE   K  +AK P  ++R AV RMLP+N++      KLRI+AG  HP   
Sbjct: 75  YRHSGYPGGLKEIPYKMMLAKHPERILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHPHAA 134

Query: 153 RPLEPYI 160
           +  +PYI
Sbjct: 135 QQPKPYI 141

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy Swiss-Prot
Match: Q1AU63 (50S ribosomal protein L13 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=rplM PE=3 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 60/127 (47.24%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 32  RWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIYVSGRKPTDKI 91
           +W V DA+G+ LGRLA++IS +++GK+KP Y P+ D GD  +V+NA  + V+GRK   K+
Sbjct: 14  KWYVIDAEGKTLGRLAAEISRLLRGKNKPQYTPHVDVGDFVVVVNADKVEVTGRKAEQKV 73

Query: 92  YYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGDEHPFG 151
           Y WHTGY G ++ERS +  + K P E++R+AV  M+P+ +L   + +KLRI+AG EHP  
Sbjct: 74  YRWHTGYPGGLRERSYRQMLRKRPEEILRQAVRGMMPKTRLARRQLKKLRIYAGPEHPHA 133

Query: 152 DRPLEPY 159
            +  EPY
Sbjct: 134 GQTPEPY 140

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy Swiss-Prot
Match: Q18CJ1 (50S ribosomal protein L13 OS=Clostridioides difficile (strain 630) OX=272563 GN=rplM PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.6e-29
Identity = 62/117 (52.99%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 32  RWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIYVSGRKPTDKI 91
           +W + DA+G+ LGRLA++I+TV++GK KPT+ P+ D GD  +V+NA+ I +SG+K   K 
Sbjct: 14  KWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKY 73

Query: 92  YYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGDEH 149
           Y +HTGYVG +KE S +D M K P EVI  AV  MLP+NKLR     +LR+FAG EH
Sbjct: 74  YRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEH 130

[Close]

BLAST of Cp4.1LG19g11710 vs. NCBI nr
Match: XP_023518866.1 (uncharacterized protein LOC111782260 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379 bits (973), Expect = 5.20e-132
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           +RALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN
Sbjct: 14  KRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 73

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR
Sbjct: 74  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 133

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN
Sbjct: 134 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 193

Query: 197 RKKEEKVEEVIA 208
           RKKEEKVEEVIA
Sbjct: 194 RKKEEKVEEVIA 205

[Close]

BLAST of Cp4.1LG19g11710 vs. NCBI nr
Match: KAG6595080.1 (hypothetical protein SDJN03_11633, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 375 bits (962), Expect = 1.61e-130
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           +RALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN
Sbjct: 2   KRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 61

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDIYVSGRKP DKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR
Sbjct: 62  AKDIYVSGRKPNDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 121

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQN DNHSKKN
Sbjct: 122 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNNDNHSKKN 181

Query: 197 RKKEEKVEEVIA 208
           RKKEEKVEEVIA
Sbjct: 182 RKKEEKVEEVIA 193

[Close]

BLAST of Cp4.1LG19g11710 vs. NCBI nr
Match: XP_022963327.1 (uncharacterized protein LOC111463568 [Cucurbita moschata])

HSP 1 Score: 375 bits (963), Expect = 1.74e-130
Identity = 189/192 (98.44%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           +RALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN
Sbjct: 14  KRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 73

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDIYVSGRKP+DKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR
Sbjct: 74  AKDIYVSGRKPSDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 133

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQN DNHSKKN
Sbjct: 134 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNNDNHSKKN 193

Query: 197 RKKEEKVEEVIA 208
           RKKEEKVEEVIA
Sbjct: 194 RKKEEKVEEVIA 205

[Close]

BLAST of Cp4.1LG19g11710 vs. NCBI nr
Match: XP_023003668.1 (uncharacterized protein LOC111497191 [Cucurbita maxima])

HSP 1 Score: 367 bits (941), Expect = 3.79e-127
Identity = 187/192 (97.40%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           +RALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN
Sbjct: 14  KRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 73

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDIYVSGRKPTDKIYYWHTGYVG++KERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR
Sbjct: 74  AKDIYVSGRKPTDKIYYWHTGYVGNLKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 133

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQN DNHSKKN
Sbjct: 134 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNDDNHSKKN 193

Query: 197 RKKEEKVEEVIA 208
           RKKEEKV EVIA
Sbjct: 194 RKKEEKV-EVIA 204

[Close]

BLAST of Cp4.1LG19g11710 vs. NCBI nr
Match: XP_022139365.1 (uncharacterized protein LOC111010318 [Momordica charantia])

HSP 1 Score: 338 bits (867), Expect = 7.16e-116
Identity = 170/192 (88.54%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           ++ALAG++RINLEGLRWRVFDAKGQVLGRLASQISTV+QGKDKPTYAPNRDDGDMCIVLN
Sbjct: 14  KKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVVQGKDKPTYAPNRDDGDMCIVLN 73

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDI V+GRK TDK Y+WHTGYVG++KERSLKDQ+AKDPTEVIRKAVLRMLPRN+LRDDR
Sbjct: 74  AKDICVTGRKLTDKFYHWHTGYVGNLKERSLKDQLAKDPTEVIRKAVLRMLPRNELRDDR 133

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVRE+RPR RRAMIRAQKKAEQQ NG+N S+K+
Sbjct: 134 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVRELRPRVRRAMIRAQKKAEQQTNGNNESRKS 193

Query: 197 RKKEEKVEEVIA 208
           RKKEEKV EVIA
Sbjct: 194 RKKEEKV-EVIA 204

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy TrEMBL
Match: A0A6J1HEZ9 (uncharacterized protein LOC111463568 OS=Cucurbita moschata OX=3662 GN=LOC111463568 PE=3 SV=1)

HSP 1 Score: 375 bits (963), Expect = 8.42e-131
Identity = 189/192 (98.44%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           +RALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN
Sbjct: 14  KRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 73

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDIYVSGRKP+DKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR
Sbjct: 74  AKDIYVSGRKPSDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 133

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQN DNHSKKN
Sbjct: 134 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNNDNHSKKN 193

Query: 197 RKKEEKVEEVIA 208
           RKKEEKVEEVIA
Sbjct: 194 RKKEEKVEEVIA 205

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy TrEMBL
Match: A0A6J1KX97 (uncharacterized protein LOC111497191 OS=Cucurbita maxima OX=3661 GN=LOC111497191 PE=3 SV=1)

HSP 1 Score: 367 bits (941), Expect = 1.83e-127
Identity = 187/192 (97.40%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           +RALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN
Sbjct: 14  KRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 73

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDIYVSGRKPTDKIYYWHTGYVG++KERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR
Sbjct: 74  AKDIYVSGRKPTDKIYYWHTGYVGNLKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 133

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQN DNHSKKN
Sbjct: 134 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNDDNHSKKN 193

Query: 197 RKKEEKVEEVIA 208
           RKKEEKV EVIA
Sbjct: 194 RKKEEKV-EVIA 204

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy TrEMBL
Match: A0A6J1CC45 (uncharacterized protein LOC111010318 OS=Momordica charantia OX=3673 GN=LOC111010318 PE=3 SV=1)

HSP 1 Score: 338 bits (867), Expect = 3.47e-116
Identity = 170/192 (88.54%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           ++ALAG++RINLEGLRWRVFDAKGQVLGRLASQISTV+QGKDKPTYAPNRDDGDMCIVLN
Sbjct: 14  KKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVVQGKDKPTYAPNRDDGDMCIVLN 73

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDI V+GRK TDK Y+WHTGYVG++KERSLKDQ+AKDPTEVIRKAVLRMLPRN+LRDDR
Sbjct: 74  AKDICVTGRKLTDKFYHWHTGYVGNLKERSLKDQLAKDPTEVIRKAVLRMLPRNELRDDR 133

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVRE+RPR RRAMIRAQKKAEQQ NG+N S+K+
Sbjct: 134 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVRELRPRVRRAMIRAQKKAEQQTNGNNESRKS 193

Query: 197 RKKEEKVEEVIA 208
           RKKEEKV EVIA
Sbjct: 194 RKKEEKV-EVIA 204

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy TrEMBL
Match: A0A6J1BUX0 (uncharacterized protein LOC111005959 OS=Momordica charantia OX=3673 GN=LOC111005959 PE=3 SV=1)

HSP 1 Score: 338 bits (866), Expect = 4.92e-116
Identity = 170/192 (88.54%), Postives = 183/192 (95.31%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           ++ALAG++RINLEGLRWRVFDAKGQVLGRLASQISTV+QGKDKPTY PNRDDGDMCIVLN
Sbjct: 14  KKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVVQGKDKPTYTPNRDDGDMCIVLN 73

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDI V+GRK TDK Y+WHTGYVG++KERSLKDQ+AKDPTEVIRKAVLRMLPRNKLRDDR
Sbjct: 74  AKDICVTGRKLTDKFYHWHTGYVGNLKERSLKDQLAKDPTEVIRKAVLRMLPRNKLRDDR 133

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVRE+RPR RRAMIRAQKKAEQQ NG N S+K+
Sbjct: 134 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVRELRPRVRRAMIRAQKKAEQQTNGSNESRKS 193

Query: 197 RKKEEKVEEVIA 208
           RKKEEKV EVIA
Sbjct: 194 RKKEEKV-EVIA 204

[Close]

BLAST of Cp4.1LG19g11710 vs. ExPASy TrEMBL
Match: A0A0A0KL19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487720 PE=3 SV=1)

HSP 1 Score: 328 bits (841), Expect = 3.17e-112
Identity = 163/188 (86.70%), Postives = 178/188 (94.68%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           ++ALAG+KRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN
Sbjct: 14  KKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 73

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AKDI V+GRK T K+YYWHTGYVG++KER+L++QM +DPTEVIRKAVLRMLP+NKLRDDR
Sbjct: 74  AKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDR 133

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRP+ RRAMIRAQK AEQQQN  N  K++
Sbjct: 134 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMAEQQQNNKNEGKES 193

Query: 197 RKKEEKVE 204
           RKKEEKVE
Sbjct: 194 RKKEEKVE 201

[Close]

BLAST of Cp4.1LG19g11710 vs. TAIR 10
Match: AT3G01790.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 298.9 bits (764), Expect = 3.2e-81
Identity = 146/183 (79.78%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           ++A+AGIKRINL+GLRWRVFDA+GQVLGRLASQISTV+Q KDKPTY PNRDDGD+CIVLN
Sbjct: 16  KKAVAGIKRINLDGLRWRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLN 75

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AK+I  +GRK TDK Y WHTGY+GH+KERSLKDQMAKDPTEVIRKAV RMLP N LRDDR
Sbjct: 76  AKEIGFTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDR 135

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIF G EHPFGD+PLEP++MPPR VREMRPRARRAMIRAQKKAEQ +N     KK 
Sbjct: 136 DRKLRIFEGGEHPFGDKPLEPFVMPPRRVREMRPRARRAMIRAQKKAEQAENEGTEVKKG 195

Query: 197 RKK 200
           +K+
Sbjct: 196 KKR 198

[Close]

BLAST of Cp4.1LG19g11710 vs. TAIR 10
Match: AT3G01790.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 298.9 bits (764), Expect = 3.2e-81
Identity = 146/183 (79.78%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 17  QRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLN 76
           ++A+AGIKRINL+GLRWRVFDA+GQVLGRLASQISTV+Q KDKPTY PNRDDGD+CIVLN
Sbjct: 16  KKAVAGIKRINLDGLRWRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLN 75

Query: 77  AKDIYVSGRKPTDKIYYWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDR 136
           AK+I  +GRK TDK Y WHTGY+GH+KERSLKDQMAKDPTEVIRKAV RMLP N LRDDR
Sbjct: 76  AKEIGFTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDR 135

Query: 137 DRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKAEQQQNGDNHSKKN 196
           DRKLRIF G EHPFGD+PLEP++MPPR VREMRPRARRAMIRAQKKAEQ +N     KK 
Sbjct: 136 DRKLRIFEGGEHPFGDKPLEPFVMPPRRVREMRPRARRAMIRAQKKAEQAENEGTEVKKG 195

Query: 197 RKK 200
           +K+
Sbjct: 196 KKR 198

[Close]

BLAST of Cp4.1LG19g11710 vs. TAIR 10
Match: AT1G78630.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-16
Identity = 47/135 (34.81%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 33  WRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIYVSGRKPTDKIY 92
           W V DA  ++LGRLAS I+  I+GK+  +Y P+ D G   IV+NA+ + VSG+K   K+Y
Sbjct: 105 WFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 164

Query: 93  YWHTGYVGHVKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGDEHPF-G 152
             H+G  G +   +      + P  ++  AV  MLP+ +L       L+++ G +HP   
Sbjct: 165 RRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEA 224

Query: 153 DRPLEPYIMPPRNVR 167
            +PL+   +P R+ R
Sbjct: 225 QKPLD---LPIRDKR 236

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g11710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A9WH96	3.8e-31	51.97	50S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 6...	[more]
B9LJG2	3.8e-31	51.97	50S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 6...	[more]
B8G6P5	6.5e-31	51.97	50S ribosomal protein L13 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) OX...	[more]
Q1AU63	1.1e-30	47.24	50S ribosomal protein L13 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16...	[more]
Q18CJ1	3.6e-29	52.99	50S ribosomal protein L13 OS=Clostridioides difficile (strain 630) OX=272563 GN=...	[more]

BLAST of Cp4.1LG19g11710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518866.1	5.20e-132	99.48	uncharacterized protein LOC111782260 [Cucurbita pepo subsp. pepo]	[more]
KAG6595080.1	1.61e-130	98.44	hypothetical protein SDJN03_11633, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022963327.1	1.74e-130	98.44	uncharacterized protein LOC111463568 [Cucurbita moschata]	[more]
XP_023003668.1	3.79e-127	97.40	uncharacterized protein LOC111497191 [Cucurbita maxima]	[more]
XP_022139365.1	7.16e-116	88.54	uncharacterized protein LOC111010318 [Momordica charantia]	[more]

BLAST of Cp4.1LG19g11710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEZ9	8.42e-131	98.44	uncharacterized protein LOC111463568 OS=Cucurbita moschata OX=3662 GN=LOC1114635...	[more]
A0A6J1KX97	1.83e-127	97.40	uncharacterized protein LOC111497191 OS=Cucurbita maxima OX=3661 GN=LOC111497191...	[more]
A0A6J1CC45	3.47e-116	88.54	uncharacterized protein LOC111010318 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1BUX0	4.92e-116	88.54	uncharacterized protein LOC111005959 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A0A0KL19	3.17e-112	86.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487720 PE=3 SV=1	[more]

BLAST of Cp4.1LG19g11710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01790.1	3.2e-81	79.78	Ribosomal protein L13 family protein	[more]
AT3G01790.2	3.2e-81	79.78	Ribosomal protein L13 family protein	[more]
AT1G78630.1	2.1e-16	34.81	Ribosomal protein L13 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005822	Ribosomal protein L13	PFAM	PF00572	Ribosomal_L13	coord: 32..149 e-value: 5.6E-43 score: 145.8
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 10..187
IPR005822	Ribosomal protein L13	HAMAP	MF_01366	Ribosomal_L13	coord: 33..156 score: 25.498758
IPR005822	Ribosomal protein L13	CDD	cd00392	Ribosomal_L13	coord: 33..146 e-value: 2.28411E-52 score: 162.289
IPR036899	Ribosomal protein L13 superfamily	GENE3D	3.90.1180.10	Ribosomal protein L13	coord: 30..169 e-value: 8.0E-58 score: 196.6
IPR036899	Ribosomal protein L13 superfamily	SUPERFAMILY	52161	Ribosomal protein L13	coord: 32..154
IPR005823	Ribosomal protein L13, bacterial-type	TIGRFAM	TIGR01066	TIGR01066	coord: 32..150 e-value: 1.3E-43 score: 146.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..208
None	No IPR available	PANTHER	PTHR11545:SF2	39S RIBOSOMAL PROTEIN L13, MITOCHONDRIAL	coord: 10..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g11710.1	Cp4.1LG19g11710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome