Cp4.1LG19g11700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g11700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	NEDD8-conjugating enzyme Ubc12
Location	Cp4.1LG19: 4804868 .. 4808927 (-)
RNA-Seq Expression	Cp4.1LG19g11700
Synteny	Cp4.1LG19g11700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTTTACTTCTTCCTCATCAGGTTCTTTCTTACGATCTTTTACGGCATTTATTTGTTTATTCAATTCTTTGCTGTTGGTTTGGTTTTGGGAACCTAGGCTGTGGATTGCTCGATAGTGATTAGAAACGTAATTCAAATTTAATTACTCGCGAAATCGCATTGGAAGTATGGTGGCTTTGATTTGTACCACTTTTGTTTTTCGTTTTTTAAATCGGGATTTGGATGTGATTATTTGTTTGGGATGATTTTTAGTGTTGGGACTGTGCATTATGTGAACAGTTTCTTCCATGCGAATGTTTTGTTCGTTGGCTTTGTAGTCTGAATTTCTAAGTGGTGTTCTTTCTAGAGAGGAATTGGAGGATCTGAACCTTATCGTTTGCGTTTTTTGTTTGCCATGGAGACGTAGCTTAGCCTTTTGTTGTTAATTTGGAATTGGCATTCTGTTGGATCTCAGTCACGAGTCCATGATGTTGTTATTTTCTTGAAGAGATTTTGTTGCATCCCCTGCTTCGAGAGAGATGTACATTGCCCTCACAGGCTGTTCTCTAAGTTGTGTTATGATTTTATTTATTTATTTATTTATTTATTGGAGAGGATTGGAAGGGTTTTTCAAGATATGAAGGGGTTTCTGATGGAGGTTTGGAGTGCGATTTATTTGTCTGTCTCTGATTGGATTTCTTATAATTAGTTGTTAGTAAATTCTCTCTCTCTCTCTCTCTCTTACAACATGCAGCTGGGGCTTCTTTTTTTTAGGTGCTACTATGGTATTGCTAACCTATTCTTCGGTGGTCTGACCTTGCTTTTTCGTTGTTATATTCTTGCTAATGAACGCTGGTTTCTTATCCTGGAAGGGAGGAAGGTTTTTGAAAGAACACAATATATTCATGGGGTGTAATTGTTGCATATTCTGCTGCAGGAGATATGATTAAGCTGTTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGGGTACCTATAAAGAAGCAAAGTGCTGGAGAACTACGTCTTCACAAAGGTTTGGCTATGAACAGAGTTTATTTGGTTCTTTATATTCCATTGAGAAGCAATGAGGTGATAGTTTTGATCCCATTAGAGATGATGGTTTTCTTTGGAACTATATCAAATTTGTTTTGTTTACATCGATAATAGATTTTGAGTTGCAACTTTGAAGCTTCTTTTCTGTGGATTGGGTGTAGGAATGCGTGTTAGCTGTGGTTAAATATTGCAAACTTTTAGCATTTTTTTTTTGAAAACCTAAATTTTGATGAAGTAGCTTGAGATTTCATGTATAAATAAGAAGTCTTATATTCAAAGACCATATTTCCCAATGTGCGTTCTATGCACTTATGATAGTATATGATTATTTGAGGTTGTTCTGAGATGCATGAATGTCCTGAGTTTATATAAAGATGGATGGTCAGCGTGTATTTTTTAAGTTTTTGGTAATTTGCTCGGTGCCCCGGCCTACCAGTTAACTGGTATGTTTTAGTGTGTGGATTTCCATGTACTACCCTCCAACTGGGAATTATGTCTGTCAATTTGGTTGCTCATAGTCACATTTTTGTCACTTTCTGCTAGACTACACTTTTATGGAACCTGGAAAATCATGTGGATGCCTGCAAGGCTGGGTGAACCTGCCAGGGTTCAGTACATTGGAAGAAAATTAAGTGAGAGGATGTGTCCTCGTGGGAAGTTACTCATGAAAACTTTTGAGATGCATGGTGCATGAGAATGCCAAGAATTAATAACTTTGCTTGATGTCTGATGATATGGGGAGTGAAAACCCAAAACGACCTTTTCAGTATATAAAAGTTGGTGGTAGCATTAGAAGTTAATTTTGGTTTCTTCCACTAATTTAACCACGAATGATTCTTTCGAACAGTCTCAGTTCAATTGAGTAGCTGATATTAAATTGTTCGACTTAAGTGAGACTGTAAATTTTGCTAATGTTGTGAAAAAAAAGTGTCCCATCCTAAGATGTCATCTGTTTCTTAAATGTCAATGAAGATTATGATCATATATCAGTCTTGTCACATTCAGAAGCGATGGGGGCATTAATGCCCAAAAGAACCTGGATAGTTAAAATTCATGCATTAGAAGCTTGGAGTGACCTATTATTTATTTATTTATTTTAATATTTATTATATAACCTATGACTTATGTTGAGAGGGATGTCCAAATTTCACTGCCTTTGTTATTTACTCGTGGGTTCTTTATTTAGATGATTTCTCCAATTGCATTTGAGACAAGTCACACTCCAGCATATGGCACTGGAAGTCTGTTTATTCAGTTGGAGTTGTTTTTCAACTATTTTTTTTACTTGTATGCCTATTTGAGAGGGATATACCTTGTCGGTTAGTTATTGTTGGTGCCTGATCTGTTGCAGATATTAGTGAGCTGAATCTACCAAAATCATGTAACATAACCTTTCCCAATGGCAAGGATGACCTGATGAACTTTGAAGTGTCAATACGACCAGATGAGGGATATTATTTGTAAGAATTCTCTTTTCTCCAAGATTCATACTCAAGCAATCTGCAATCTTTTTAGCTTAAACTGTTGCCTGCTAGTTGAGGATATTTTCCTCTTTTTGTTAATTTCTTTCACAGTCTAGATGTTAACTCCAAACCAGAAATTGAAATGGAAACTAACACAAAATACTCTTGATATATGGAAAGAGAGTGGGAAGTTTCCGATGCACTTCAGGAGCCTTGTACTCTCCCACAAACTAATTCTAGAAAACTGCTCATCCCAAATTCTCTTCCTCCCATCTGCTTATGCCTTCCACTAACCAACTCCAAATATGCTTTCCTGCCTTCTTAATATCTTAATAGCATTCTTAATATTTACTTGCCAATATTCCTAACTGCTTGCTTTTCTCTATATTACAGAGGAGGCACATTTTTGTTCTCCTTTACAGTTTCCCCCATCTATCCGCATGAAGCCCCGAAGGTCAAGTGCAGGACAAAGGTAAACCTGGATGGCTCCTTACCCTTAGCATTTGATCCTTTCTGAATATAAATGATTTTTTTTTTTTTTTTGTATATACTAACTTGTACTTTATGCAGGTCTACCATCCAAACATCGACTTGGAAGGAAACGTCTGCCTCAACATCTTACGAGAAGATTGGAAACCTGTTCTCAATATTAACACTGTTATTTATGGACTCTACCATCTGTTCACGGTATAAATAAGCTTCATTAGTAAAATGCTTCAGTTTTGGGAACATTTAAAAGTCATAAGTTGTCTTCTTACCCTGTTTTTTAATTTCCAACCAGGAACCAAACGATGAGGATCCTCTGAATCATGATGCTGCTGCAGTTTTAAGAGACAATCCGAAGTTATTCGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTACGTGGGGCCAACCTTTTTCCCACGCTGTATGTAACTCACTCATAATCCTTCCTTCTTGTTCAACTTTTCACTGCCCTGTATGTAGCTAGATTCTGTCTCTCCGTACATTAAGTGCTCATTTAGAGATAATATCACCCACGGTTGTGTTAGTCCAATGGATGGAGTTAGTGATGTTAATGTGTAACACTTCTAAATTGTTAATTAACATGGTTACATTTTGTCCCTTCTTATGGTACACTATTTTGGATGGAAGCCAAAGGCATGCCATGACGGAGGGGGGCAGGCAAGTGTTCGAAGACTGATTTTGTAGAAACTTCCAAATTTGTCTCTCATCCCTATGCCTCGGCCTACTACTGCTTGTGTTTCAGAAGGAACATGCAAGTGGTGAATGCTGAGGTAATCAAAGTTCCTTGTGTGTCCTCCTTGAATGCTTTGGAAGTTGGATCCTATGGTAGAAATCTTGAATGCTTTGGAAAATAAGCTCCCCATCATTTCTCTAATTTTTCTTAGACTTTGAAGATTTTAGTGAAGAACATAATGTCACTTGATCATTTGAGTTTGAGTTGAAGAAGTATTTGTTTTGAAACATTCCAGTTTATTTGTTTTGGACCCAAATTTGAGGGTTCTGAATGTCGGTACAAGCGGCGCTCTTATTCTG

mRNA sequence

ATGCGTTTTACTTCTTCCTCATCAGGAGATATGATTAAGCTGTTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGGGTACCTATAAAGAAGCAAAGTGCTGGAGAACTACGTCTTCACAAAGATATTAGTGAGCTGAATCTACCAAAATCATGTAACATAACCTTTCCCAATGGCAAGGATGACCTGATGAACTTTGAAGTGTCAATACGACCAGATGAGGGATATTATTTAGGAGGCACATTTTTGTTCTCCTTTACAGTTTCCCCCATCTATCCGCATGAAGCCCCGAAGGTCAAGTGCAGGACAAAGGTCTACCATCCAAACATCGACTTGGAAGGAAACGTCTGCCTCAACATCTTACGAGAAGATTGGAAACCTGTTCTCAATATTAACACTGTTATTTATGGACTCTACCATCTGTTCACGGAACCAAACGATGAGGATCCTCTGAATCATGATGCTGCTGCAGTTTTAAGAGACAATCCGAAGTTATTCGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTACGTGGGGCCAACCTTTTTCCCACGCTGTATGTAACTCACTCATAATCCTTCCTTCTTGTTCAACTTTTCACTGCCCTGTATGTAGCTAGATTCTGTCTCTCCGTACATTAAGTGCTCATTTAGAGATAATATCACCCACGGTTGTGTTAGTCCAATGGATGGAGTTAGTGATGTTAATGTGTAACACTTCTAAATTGTTAATTAACATGGTTACATTTTGTCCCTTCTTATGGTACACTATTTTGGATGGAAGCCAAAGGCATGCCATGACGGAGGGGGGCAGGCAAGTGTTCGAAGACTGATTTTGTAGAAACTTCCAAATTTGTCTCTCATCCCTATGCCTCGGCCTACTACTGCTTGTGTTTCAGAAGGAACATGCAAGTGGTGAATGCTGAGGTAATCAAAGTTCCTTGTGTGTCCTCCTTGAATGCTTTGGAAGTTGGATCCTATGGTAGAAATCTTGAATGCTTTGGAAAATAAGCTCCCCATCATTTCTCTAATTTTTCTTAGACTTTGAAGATTTTAGTGAAGAACATAATGTCACTTGATCATTTGAGTTTGAGTTGAAGAAGTATTTGTTTTGAAACATTCCAGTTTATTTGTTTTGGACCCAAATTTGAGGGTTCTGAATGTCGGTACAAGCGGCGCTCTTATTCTG

Coding sequence (CDS)

ATGCGTTTTACTTCTTCCTCATCAGGAGATATGATTAAGCTGTTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGGGTACCTATAAAGAAGCAAAGTGCTGGAGAACTACGTCTTCACAAAGATATTAGTGAGCTGAATCTACCAAAATCATGTAACATAACCTTTCCCAATGGCAAGGATGACCTGATGAACTTTGAAGTGTCAATACGACCAGATGAGGGATATTATTTAGGAGGCACATTTTTGTTCTCCTTTACAGTTTCCCCCATCTATCCGCATGAAGCCCCGAAGGTCAAGTGCAGGACAAAGGTCTACCATCCAAACATCGACTTGGAAGGAAACGTCTGCCTCAACATCTTACGAGAAGATTGGAAACCTGTTCTCAATATTAACACTGTTATTTATGGACTCTACCATCTGTTCACGGAACCAAACGATGAGGATCCTCTGAATCATGATGCTGCTGCAGTTTTAAGAGACAATCCGAAGTTATTCGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTACGTGGGGCCAACCTTTTTCCCACGCTGTATGTAA

Protein sequence

MRFTSSSSGDMIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMNFEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFPRCM

Homology

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy Swiss-Prot
Match: Q9SDY5 (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana OX=3702 GN=RCE1 PE=1 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 8.0e-92
Identity = 157/184 (85.33%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENAS-NGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLM 70
           MI LFKVKEKQRE A+NA+  G  +KKQSAGELRLHKDISELNLP SC+I+FPNGKDDLM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 71  NFEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILRED 130
           NFEVSI+PD+GYY  GTF+F+F VSP+YPHEAPKVKC+TKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 131 WKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFF 190
           WKPVLNINTVIYGL+HLFTEPN EDPLNHDAAAVLRDNPKLFE+NVRRAM GGYVG TFF
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 191 PRCM 194
           PRC+
Sbjct: 181 PRCI 184

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy Swiss-Prot
Match: Q9ZU75 (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana OX=3702 GN=RCE2 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-85
Identity = 151/185 (81.62%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAE--NASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDL 70
           MI LFKVKEKQRE ++  N      +KKQSAGELRLHKDISELNLPKSC I+FPNGK+DL
Sbjct: 1   MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60

Query: 71  MNFEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILRE 130
           MNFEV+I+PDEGYYL G F+FSF VS +YPHEAPKVKC+TKVYHPNIDLEGNVCLNILRE
Sbjct: 61  MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120

Query: 131 DWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTF 190
           DWKPVLNINTVIYGL+HLFTEPN EDPLNH+AAAVLRDNPK FE NVRRAM GG VG T 
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180

Query: 191 FPRCM 194
           FPRCM
Sbjct: 181 FPRCM 185

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy Swiss-Prot
Match: Q6DCZ9 (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis OX=8355 GN=ube2m PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.7e-63
Identity = 113/183 (61.75%), Postives = 141/183 (77.05%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLF +K++++E           KK SA +LR+ KDI+ELNLPK+C I F +  DDL+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDITELNLPKTCEIEF-SDHDDLLN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           F++ I PDEG+Y GG F+FSF V   YPH+ PKVKC T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVL IN++IYGL +LF EPN EDPLN +AA VL++N +LFE NV+R+M GGY+G T+F 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 191 RCM 194
           RC+
Sbjct: 181 RCL 182

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy Swiss-Prot
Match: Q6P8D9 (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis OX=8364 GN=ube2m PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.7e-63
Identity = 113/183 (61.75%), Postives = 141/183 (77.05%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLF +K++++E           KK SA +LR+ KDI+ELNLPK+C I F +  DDL+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCEIEF-SDHDDLLN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           F++ I PDEG+Y GG F+FSF V   YPH+ PKVKC T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVL IN++IYGL +LF EPN EDPLN +AA VL++N +LFE NV+R+M GGY+G T+F 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 191 RCM 194
           RC+
Sbjct: 181 RCL 182

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy Swiss-Prot
Match: A3KN22 (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus OX=9913 GN=UBE2M PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.0e-63
Identity = 112/183 (61.20%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLF +K++++E           KK SA +LR+ KDI+ELNLPK+C+I+F +  DDL+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISF-SDPDDLLN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           F++ I PDEG+Y  G F+FSF V   YPH+ PKVKC T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVL IN++IYGL +LF EPN EDPLN +AA VL++N +LFE NV+R+M GGY+G T+F 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 191 RCM 194
           RC+
Sbjct: 181 RCL 182

[Close]

BLAST of Cp4.1LG19g11700 vs. NCBI nr
Match: KAG7027101.1 (NEDD8-conjugating enzyme Ubc12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386 bits (992), Expect = 2.34e-135
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 9   GDMIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDL 68
           GDMIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDL
Sbjct: 9   GDMIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDL 68

Query: 69  MNFEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILRE 128
           MNFEVSIRPDEGYYLGGTFLFSF VSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILRE
Sbjct: 69  MNFEVSIRPDEGYYLGGTFLFSFAVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILRE 128

Query: 129 DWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTF 188
           DWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTF
Sbjct: 129 DWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTF 188

Query: 189 FPRCM 193
           FPRCM
Sbjct: 189 FPRCM 193

[Close]

BLAST of Cp4.1LG19g11700 vs. NCBI nr
Match: XP_022962896.1 (NEDD8-conjugating enzyme Ubc12 isoform X2 [Cucurbita moschata] >XP_023517115.1 NEDD8-conjugating enzyme Ubc12 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384 bits (985), Expect = 1.91e-134
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 180

Query: 191 RCM 193
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of Cp4.1LG19g11700 vs. NCBI nr
Match: XP_023004086.1 (NEDD8-conjugating enzyme Ubc12 isoform X2 [Cucurbita maxima])

HSP 1 Score: 382 bits (980), Expect = 1.11e-133
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSC+ITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCSITFPNGKDDLMN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 180

Query: 191 RCM 193
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of Cp4.1LG19g11700 vs. NCBI nr
Match: XP_022962895.1 (NEDD8-conjugating enzyme Ubc12 isoform X1 [Cucurbita moschata] >XP_023517114.1 NEDD8-conjugating enzyme Ubc12 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378 bits (971), Expect = 2.90e-132
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 180

[Close]

BLAST of Cp4.1LG19g11700 vs. NCBI nr
Match: KAG6595086.1 (NEDD8-conjugating enzyme Ubc12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 376 bits (966), Expect = 1.68e-131
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           FEVSIRPDEGYYLGGTFLFSF VSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFLFSFAVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 180

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy TrEMBL
Match: A0A6J1HEK4 (NEDD8-conjugating enzyme Ubc12 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463261 PE=3 SV=1)

HSP 1 Score: 384 bits (985), Expect = 9.25e-135
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 180

Query: 191 RCM 193
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy TrEMBL
Match: A0A6J1KR48 (NEDD8-conjugating enzyme Ubc12 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497502 PE=3 SV=1)

HSP 1 Score: 382 bits (980), Expect = 5.36e-134
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSC+ITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCSITFPNGKDDLMN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 180

Query: 191 RCM 193
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy TrEMBL
Match: A0A6J1HGD0 (NEDD8-conjugating enzyme Ubc12 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463261 PE=3 SV=1)

HSP 1 Score: 378 bits (971), Expect = 1.40e-132
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 180

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy TrEMBL
Match: A0A6J1KTL6 (NEDD8-conjugating enzyme Ubc12 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497502 PE=3 SV=1)

HSP 1 Score: 376 bits (966), Expect = 8.13e-132
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSC+ITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCSITFPNGKDDLMN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 180

[Close]

BLAST of Cp4.1LG19g11700 vs. ExPASy TrEMBL
Match: A0A0A0KJ88 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487630 PE=3 SV=1)

HSP 1 Score: 375 bits (964), Expect = 1.48e-131
Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 70
           MIKLFKVKEKQRELAENASNGVP KKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 71  FEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILREDW 130
           FEVSIRPDEGYYLGGTF FSFTVSPIYPHEAPKVKC+TKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 131 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFFP 190
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVG TFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180

Query: 191 RCM 193
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of Cp4.1LG19g11700 vs. TAIR 10
Match: AT4G36800.1 (RUB1 conjugating enzyme 1 )

HSP 1 Score: 337.8 bits (865), Expect = 5.7e-93
Identity = 157/184 (85.33%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENAS-NGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLM 70
           MI LFKVKEKQRE A+NA+  G  +KKQSAGELRLHKDISELNLP SC+I+FPNGKDDLM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 71  NFEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILRED 130
           NFEVSI+PD+GYY  GTF+F+F VSP+YPHEAPKVKC+TKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 131 WKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFF 190
           WKPVLNINTVIYGL+HLFTEPN EDPLNHDAAAVLRDNPKLFE+NVRRAM GGYVG TFF
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 191 PRCM 194
           PRC+
Sbjct: 181 PRCI 184

[Close]

BLAST of Cp4.1LG19g11700 vs. TAIR 10
Match: AT4G36800.2 (RUB1 conjugating enzyme 1 )

HSP 1 Score: 337.8 bits (865), Expect = 5.7e-93
Identity = 157/184 (85.33%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAENAS-NGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLM 70
           MI LFKVKEKQRE A+NA+  G  +KKQSAGELRLHKDISELNLP SC+I+FPNGKDDLM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 71  NFEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILRED 130
           NFEVSI+PD+GYY  GTF+F+F VSP+YPHEAPKVKC+TKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 131 WKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTFF 190
           WKPVLNINTVIYGL+HLFTEPN EDPLNHDAAAVLRDNPKLFE+NVRRAM GGYVG TFF
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 191 PRCM 194
           PRC+
Sbjct: 181 PRCI 184

[Close]

BLAST of Cp4.1LG19g11700 vs. TAIR 10
Match: AT2G18600.1 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 317.0 bits (811), Expect = 1.0e-86
Identity = 151/185 (81.62%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 11  MIKLFKVKEKQRELAE--NASNGVPIKKQSAGELRLHKDISELNLPKSCNITFPNGKDDL 70
           MI LFKVKEKQRE ++  N      +KKQSAGELRLHKDISELNLPKSC I+FPNGK+DL
Sbjct: 1   MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60

Query: 71  MNFEVSIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCRTKVYHPNIDLEGNVCLNILRE 130
           MNFEV+I+PDEGYYL G F+FSF VS +YPHEAPKVKC+TKVYHPNIDLEGNVCLNILRE
Sbjct: 61  MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120

Query: 131 DWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGPTF 190
           DWKPVLNINTVIYGL+HLFTEPN EDPLNH+AAAVLRDNPK FE NVRRAM GG VG T 
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180

Query: 191 FPRCM 194
           FPRCM
Sbjct: 181 FPRCM 185

[Close]

BLAST of Cp4.1LG19g11700 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-23
Identity = 50/135 (37.04%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 43  RLHKDISELNLPKSCNITFPNGKDDLMNFEVSIR-PDEGYYLGGTFLFSFTVSPIYPHEA 102
           R+ K++ +L      N +     +D+ +++ +I  P E  Y GG FL S    P YP + 
Sbjct: 5   RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKP 64

Query: 103 PKVKCRTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAA 162
           PKV  +TKVYHPNI+  G++CL+IL+E W P L I+ V+  +  L T+PN +DPL  + A
Sbjct: 65  PKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124

Query: 163 AVLRDNPKLFESNVR 177
            + + +   +ES  R
Sbjct: 125 HMYKTDRSKYESTAR 139

[Close]

BLAST of Cp4.1LG19g11700 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-23
Identity = 50/135 (37.04%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 43  RLHKDISELNLPKSCNITFPNGKDDLMNFEVSIR-PDEGYYLGGTFLFSFTVSPIYPHEA 102
           R+ K++ +L      N +     +D+ +++ +I  P E  Y GG FL S    P YP + 
Sbjct: 5   RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKP 64

Query: 103 PKVKCRTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAA 162
           PKV  +TKVYHPNI+  G++CL+IL+E W P L I+ V+  +  L T+PN +DPL  + A
Sbjct: 65  PKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124

Query: 163 AVLRDNPKLFESNVR 177
            + + +   +ES  R
Sbjct: 125 HMYKTDRSKYESTAR 139

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g11700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SDY5	8.0e-92	85.33	NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana OX=3702 GN=RCE1 PE=1 SV=1	[more]
Q9ZU75	1.5e-85	81.62	Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q6DCZ9	2.7e-63	61.75	NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis OX=8355 GN=ube2m PE=2 SV=1	[more]
Q6P8D9	2.7e-63	61.75	NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis OX=8364 GN=ube2m PE=2 SV=1	[more]
A3KN22	6.0e-63	61.20	NEDD8-conjugating enzyme Ubc12 OS=Bos taurus OX=9913 GN=UBE2M PE=2 SV=1	[more]

BLAST of Cp4.1LG19g11700 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027101.1	2.34e-135	99.46	NEDD8-conjugating enzyme Ubc12, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022962896.1	1.91e-134	100.00	NEDD8-conjugating enzyme Ubc12 isoform X2 [Cucurbita moschata] >XP_023517115.1 N...	[more]
XP_023004086.1	1.11e-133	99.45	NEDD8-conjugating enzyme Ubc12 isoform X2 [Cucurbita maxima]	[more]
XP_022962895.1	2.90e-132	100.00	NEDD8-conjugating enzyme Ubc12 isoform X1 [Cucurbita moschata] >XP_023517114.1 N...	[more]
KAG6595086.1	1.68e-131	99.45	NEDD8-conjugating enzyme Ubc12, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG19g11700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEK4	9.25e-135	100.00	NEDD8-conjugating enzyme Ubc12 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KR48	5.36e-134	99.45	NEDD8-conjugating enzyme Ubc12 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1HGD0	1.40e-132	100.00	NEDD8-conjugating enzyme Ubc12 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KTL6	8.13e-132	99.45	NEDD8-conjugating enzyme Ubc12 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0KJ88	1.48e-131	97.81	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487630 PE...	[more]

BLAST of Cp4.1LG19g11700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36800.1	5.7e-93	85.33	RUB1 conjugating enzyme 1	[more]
AT4G36800.2	5.7e-93	85.33	RUB1 conjugating enzyme 1	[more]
AT2G18600.1	1.0e-86	81.62	Ubiquitin-conjugating enzyme family protein	[more]
AT3G08690.1	2.8e-23	37.04	ubiquitin-conjugating enzyme 11	[more]
AT3G08690.2	2.8e-23	37.04	ubiquitin-conjugating enzyme 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 42..184 e-value: 1.7E-33 score: 127.2
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 21..183
None	No IPR available	PANTHER	PTHR24068:SF379	SUBFAMILY NOT NAMED	coord: 21..183
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 35..193 e-value: 3.1E-46 score: 158.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 35..191
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 43..178 e-value: 4.2E-37 score: 126.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 39..184 score: 37.653023
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 43..177 e-value: 4.41857E-40 score: 131.556
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 111..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g11700.1	Cp4.1LG19g11700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045116	protein neddylation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016746	acyltransferase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0019788	NEDD8 transferase activity