Cp4.1LG19g11640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g11640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	geranylgeranyl pyrophosphate synthase, chloroplastic
Location	Cp4.1LG19: 4810988 .. 4812106 (-)
RNA-Seq Expression	Cp4.1LG19g11640
Synteny	Cp4.1LG19g11640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCTGTGAGTTTCGCGAATCCATTGATTCAGAGCAACTCTGTTTTCAACAATTCTCAGAAATTCAATCCAAAATCCTTTTCTTTTCTTCATCCATGGAACCCTTTGTCGTCTTTTTCCTCCAAATCCATTAAAAAACCTTCCTTTAACCTCCGCATATCGGCGGCGCAAACCAGAGTAGAAACAGAGCTCCGCCCGGTTGTTGAACAAAATGACCAAAAAGGGGTCTTCAGTTTCAAAGACTACATGGTGCAGAAGGCTAATTTGGTAAATCAAGCTTTGAACGACGCCGTTTCCCTGCGGGACCCACTGAAGATTCACGAGGCCATGCGTTACTCTCTCCTCGCCGGCGGGAAGCGTGTACGGCCAGTGCTCTGTCTCGCTGCCTGCGAGCTCGTCGGTGGTTCTGAGTCTGCCGCTATGCCAGCCGCTTGCGCCACTGAAATGATCCACACCATGTCTTTAATCCACGATGATCTTCCATGCATGGACAACGACGACCTCCGGCGAGGAAAGCCGACGAGCCACCGTATGTTTGGTGAGGACATAGCCATCCTCGCCGGTGACGCTCTTTTAGCCTTCGCATTTGAGCACATCGCAGTGGCGACAGAGGCGGGGGTATCGCCGGAGAGAGTGGTCCAAGCAATTGGAGAATTGGCAAAAGCCACCGGAACATCAGGGTTAGTCGCCGGGCAAGTGGTGGACATAGACTCCGAAGGGTCTAACGACGTCGGATTAGAACTCCTCGAGTACATCCACGTACACAAAACGGCAGCGCTTCTGGAAGCCGCCGCCGTCATGGGAGCAATCCTAGGCGGCGGAAGCAACACCGAAGTGGAGAAGGTGAGGAAATTCGCCCGACAGATCGGATTACTGTTCCAAGTGGTAGACGACATTCTAGATGTAACAAAGTCGTCGGAGGAATTGGGGAAGACGGCCGGAAAAGACCTGGCGGCGGACAAAGCGACGTATCCAAAATTACTCGGAATCGAAAAATCAAAGGAATTTGCAGAGACGCTAAAGAGAGAAGCCGGAGAAGCGCTGGCCGGATTTGATCCGGCGAAGGCGGAGCCGTTAATTGCCCTGTCGAATTACATAGCCTATAGGCAAAATTGA

mRNA sequence

ATGAGCTCTGTGAGTTTCGCGAATCCATTGATTCAGAGCAACTCTGTTTTCAACAATTCTCAGAAATTCAATCCAAAATCCTTTTCTTTTCTTCATCCATGGAACCCTTTGTCGTCTTTTTCCTCCAAATCCATTAAAAAACCTTCCTTTAACCTCCGCATATCGGCGGCGCAAACCAGAGTAGAAACAGAGCTCCGCCCGGTTGTTGAACAAAATGACCAAAAAGGGGTCTTCAGTTTCAAAGACTACATGGTGCAGAAGGCTAATTTGGTAAATCAAGCTTTGAACGACGCCGTTTCCCTGCGGGACCCACTGAAGATTCACGAGGCCATGCGTTACTCTCTCCTCGCCGGCGGGAAGCGTGTACGGCCAGTGCTCTGTCTCGCTGCCTGCGAGCTCGTCGGTGGTTCTGAGTCTGCCGCTATGCCAGCCGCTTGCGCCACTGAAATGATCCACACCATGTCTTTAATCCACGATGATCTTCCATGCATGGACAACGACGACCTCCGGCGAGGAAAGCCGACGAGCCACCGTATGTTTGGTGAGGACATAGCCATCCTCGCCGGTGACGCTCTTTTAGCCTTCGCATTTGAGCACATCGCAGTGGCGACAGAGGCGGGGGTATCGCCGGAGAGAGTGGTCCAAGCAATTGGAGAATTGGCAAAAGCCACCGGAACATCAGGGTTAGTCGCCGGGCAAGTGGTGGACATAGACTCCGAAGGGTCTAACGACGTCGGATTAGAACTCCTCGAGTACATCCACGTACACAAAACGGCAGCGCTTCTGGAAGCCGCCGCCGTCATGGGAGCAATCCTAGGCGGCGGAAGCAACACCGAAGTGGAGAAGGTGAGGAAATTCGCCCGACAGATCGGATTACTGTTCCAAGTGGTAGACGACATTCTAGATGTAACAAAGTCGTCGGAGGAATTGGGGAAGACGGCCGGAAAAGACCTGGCGGCGGACAAAGCGACGTATCCAAAATTACTCGGAATCGAAAAATCAAAGGAATTTGCAGAGACGCTAAAGAGAGAAGCCGGAGAAGCGCTGGCCGGATTTGATCCGGCGAAGGCGGAGCCGTTAATTGCCCTGTCGAATTACATAGCCTATAGGCAAAATTGA

Coding sequence (CDS)

ATGAGCTCTGTGAGTTTCGCGAATCCATTGATTCAGAGCAACTCTGTTTTCAACAATTCTCAGAAATTCAATCCAAAATCCTTTTCTTTTCTTCATCCATGGAACCCTTTGTCGTCTTTTTCCTCCAAATCCATTAAAAAACCTTCCTTTAACCTCCGCATATCGGCGGCGCAAACCAGAGTAGAAACAGAGCTCCGCCCGGTTGTTGAACAAAATGACCAAAAAGGGGTCTTCAGTTTCAAAGACTACATGGTGCAGAAGGCTAATTTGGTAAATCAAGCTTTGAACGACGCCGTTTCCCTGCGGGACCCACTGAAGATTCACGAGGCCATGCGTTACTCTCTCCTCGCCGGCGGGAAGCGTGTACGGCCAGTGCTCTGTCTCGCTGCCTGCGAGCTCGTCGGTGGTTCTGAGTCTGCCGCTATGCCAGCCGCTTGCGCCACTGAAATGATCCACACCATGTCTTTAATCCACGATGATCTTCCATGCATGGACAACGACGACCTCCGGCGAGGAAAGCCGACGAGCCACCGTATGTTTGGTGAGGACATAGCCATCCTCGCCGGTGACGCTCTTTTAGCCTTCGCATTTGAGCACATCGCAGTGGCGACAGAGGCGGGGGTATCGCCGGAGAGAGTGGTCCAAGCAATTGGAGAATTGGCAAAAGCCACCGGAACATCAGGGTTAGTCGCCGGGCAAGTGGTGGACATAGACTCCGAAGGGTCTAACGACGTCGGATTAGAACTCCTCGAGTACATCCACGTACACAAAACGGCAGCGCTTCTGGAAGCCGCCGCCGTCATGGGAGCAATCCTAGGCGGCGGAAGCAACACCGAAGTGGAGAAGGTGAGGAAATTCGCCCGACAGATCGGATTACTGTTCCAAGTGGTAGACGACATTCTAGATGTAACAAAGTCGTCGGAGGAATTGGGGAAGACGGCCGGAAAAGACCTGGCGGCGGACAAAGCGACGTATCCAAAATTACTCGGAATCGAAAAATCAAAGGAATTTGCAGAGACGCTAAAGAGAGAAGCCGGAGAAGCGCTGGCCGGATTTGATCCGGCGAAGGCGGAGCCGTTAATTGCCCTGTCGAATTACATAGCCTATAGGCAAAATTGA

Protein sequence

MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTRVETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMFGEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSEGSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDILDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPLIALSNYIAYRQN

Homology

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.5e-131
Identity = 254/376 (67.55%), Postives = 302/376 (80.32%), Query Frame = 0


Query: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLS----SFSSKSIKKPSFNLRISA 60
           MSSV+  +  + ++ V N + +   KS SF  P+NPL     SF+ +  ++P  +  +SA
Sbjct: 1   MSSVNLGS-WVHTSYVLNQATRSRSKSKSFSLPFNPLKSLAISFAYRKSERPISS--VSA 60

Query: 61  AQTRVETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLL 120
             T+ E  L+   EQN+    F FK YM+QK N +NQAL  A+ L++P KIHE+MRYSLL
Sbjct: 61  IITKEEETLQE--EQNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLL 120

Query: 121 AGGKRVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTS 180
           AGGKRVRP LCLAACELVGG++S AMPAACA EMIHTMSLIHDDLPCMDNDDLRRGKPT+
Sbjct: 121 AGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180

Query: 181 HRMFGEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVD 240
           H +FGED+A+LAGDALLAFAFEHIAV+T   VS  R+V+A+GELAKA G  GLVAGQVVD
Sbjct: 181 HIVFGEDVAVLAGDALLAFAFEHIAVST-LNVSSARIVRAVGELAKAIGAEGLVAGQVVD 240

Query: 241 IDSEGSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQV 300
           I+SEGS++V LE LE+IH+HKTA LLE A V+GAILGGG++ EVEK+RK+AR IGLLFQV
Sbjct: 241 INSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQV 300

Query: 301 VDDILDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAK 360
           VDDILDVTKSS+ELGKTAGKDL ADK TYPKLLGIEKS+EFAE L +EA E LAGFDP K
Sbjct: 301 VDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEK 360

Query: 361 AEPLIALSNYIAYRQN 373
           A PLIAL+NYIA+RQN
Sbjct: 361 AAPLIALANYIAHRQN 370

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy Swiss-Prot
Match: Q42698 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus OX=4058 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 2.3e-127
Identity = 241/347 (69.45%), Postives = 284/347 (81.84%), Query Frame = 0


Query: 36  PLSSFSSKSIKKPSFN---LRISAAQTRVETELRPVVEQNDQKGV-------FSFKDYMV 95
           P+S F S +I+KP F+   L ISA  T+ +T+     E   +K V       F FK YM+
Sbjct: 14  PISFFLSGTIRKPIFSCSRLSISAIITKEQTQEES--ESKSKKEVAFSSSSSFDFKAYMI 73

Query: 96  QKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACELVGGSESAAMPAA 155
            KAN VN+AL DAV +R+PLKIHE+MRYSLLAGGKRVRP+LC+AACEL GG+ES AMP+A
Sbjct: 74  GKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSA 133

Query: 156 CATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMFGEDIAILAGDALLAFAFEHIAVATE 215
           CA EMIHTMSL+HDDLPCMDNDDLRRGKPT+H++FGED+A+LAGDALLAFAFEHIA AT+
Sbjct: 134 CAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATK 193

Query: 216 AGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSEGSNDVGLELLEYIHVHKTAALLEAA 275
            GVS ER+V+ +GELAK  G+ GLVAGQVVD+ SEG  DVGLE LE+IH+HKTAALLE +
Sbjct: 194 -GVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGS 253

Query: 276 AVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDILDVTKSSEELGKTAGKDLAADKATY 335
            V+GAI+GG ++ ++ K+RKFAR IGLLFQVVDDILDVTKSS+ELGKTAGKDL ADK TY
Sbjct: 254 VVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTY 313

Query: 336 PKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPLIALSNYIAYRQN 373
           PKLLGI+KS+EFAE L REA E LA FDP KA PLIAL+NYIAYR N
Sbjct: 314 PKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 357

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 452.2 bits (1162), Expect = 5.6e-126
Identity = 240/337 (71.22%), Postives = 278/337 (82.49%), Query Frame = 0


Query: 39  SFSSKSIKKPSFNLRISAAQTRVETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDA 98
           SF SK     S ++  S+  T+ E  LR       +   F F  Y++ KA LVN+AL+ A
Sbjct: 41  SFRSKRTVSSSSSIVSSSVVTK-EDNLR-----QSEPSSFDFMSYIITKAELVNKALDSA 100

Query: 99  VSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIH 158
           V LR+PLKIHEAMRYSLLAGGKRVRPVLC+AACELVGG ES AMPAACA EMIHTMSLIH
Sbjct: 101 VPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIH 160

Query: 159 DDLPCMDNDDLRRGKPTSHRMFGEDIAILAGDALLAFAFEHIAVATEAG-VSPERVVQAI 218
           DDLPCMDNDDLRRGKPT+H++FGED+A+LAGDALL+FAFEH+A AT +  VSP RVV+A+
Sbjct: 161 DDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAV 220

Query: 219 GELAKATGTSGLVAGQVVDIDSEG--SNDVGLELLEYIHVHKTAALLEAAAVMGAILGGG 278
           GELAKA GT GLVAGQVVDI SEG   NDVGLE LE+IH+HKTAALLEA+AV+GAI+GGG
Sbjct: 221 GELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGG 280

Query: 279 SNTEVEKVRKFARQIGLLFQVVDDILDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSK 338
           S+ E+E++RKFAR IGLLFQVVDDILDVTKSS+ELGKTAGKDL ADK TYPK++G+EKS+
Sbjct: 281 SDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSR 340

Query: 339 EFAETLKREAGEALAGFDPAKAEPLIALSNYIAYRQN 373
           EFAE L REA + L GFD  K  PL+AL+NYIAYRQN
Sbjct: 341 EFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy Swiss-Prot
Match: Q43133 (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.8e-122
Identity = 237/367 (64.58%), Postives = 283/367 (77.11%), Query Frame = 0


Query: 14  NSVFNNSQKFNPKSFSFLHPWN------PLSSFSSKSIKKPSFNLRISAAQTRVETELRP 73
           +++   S+  +P S   L P +        SS SS  I K   NL+ S++          
Sbjct: 19  STILTQSRSRSPPSLITLKPISLTPKRTVSSSSSSSLITKEDNNLKSSSSS--------- 78

Query: 74  VVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLC 133
                     F F  Y+++KA+ VN+AL+ AV LR+PLKIHEAMRYSLLAGGKRVRPVLC
Sbjct: 79  ----------FDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLC 138

Query: 134 LAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMFGEDIAIL 193
           +AACELVGG ES AMPA CA EMIHTMSLIHDDLPCMDNDDLRRGKPT+H+++GED+A+L
Sbjct: 139 IAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVL 198

Query: 194 AGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSEG--SNDV 253
           AGDALL+FAFEH+A AT + VSP RVV+A+GELAKA GT GLVAGQVVDI SEG   N+V
Sbjct: 199 AGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNV 258

Query: 254 GLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDILDVTK 313
           GLE L++IH+HKTAALLEA+AV+G I+GGGS+ E+E++RKFAR IGLLFQVVDDILDVTK
Sbjct: 259 GLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTK 318

Query: 314 SSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPLIALSN 373
           SS+ELGKTAGKDL ADK TYPKL+G+EKS+EFAE L  EA + L GFD  K  PL+AL+N
Sbjct: 319 SSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALAN 366

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy Swiss-Prot
Match: Q9ZU77 (Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18620 PE=2 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 4.9e-122
Identity = 223/297 (75.08%), Postives = 260/297 (87.54%), Query Frame = 0


Query: 78  FSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACELVGGS 137
           F F  YM+ KAN VN+AL+ AVSLR+P+KIHEA+RYSLLA GKRVRPVLC+AACELVGG 
Sbjct: 53  FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGE 112

Query: 138 ESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMFGEDIAILAGDALLAFAF 197
           ES A+PAACA EMIHTMSLIHDDLPCMDNDDLRRGKPT+H++FGED+A+LAGDAL++FAF
Sbjct: 113 ESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAF 172

Query: 198 EHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSEG--SNDVGLELLEYIHV 257
           EH+A +T   VSP RVV+AIGELAKA G+ GLVAGQVVD+ S G   NDVGLE+LE+IHV
Sbjct: 173 EHLATST--AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHV 232

Query: 258 HKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDILDVTKSSEELGKTAG 317
           HKTA LLEAA V+GAI+GGGS+ EVEK+R+FAR IGLLFQVVDDILDVTKSSEELGKTAG
Sbjct: 233 HKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAG 292

Query: 318 KDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPLIALSNYIAYRQN 373
           KDL ADK TYPKL+G+EKSK+FA+ L  +A E L GFD ++ +PL+AL+NYIA RQN
Sbjct: 293 KDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347

[Close]

BLAST of Cp4.1LG19g11640 vs. NCBI nr
Match: XP_023518151.1 (geranylgeranyl pyrophosphate synthase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 712 bits (1839), Expect = 1.82e-258
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0


Query: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60
           MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR
Sbjct: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60

Query: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120
           VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK
Sbjct: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120

Query: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180
           RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF
Sbjct: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180

Query: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240
           GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE
Sbjct: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240

Query: 241 GSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300
           GSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI
Sbjct: 241 GSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300

Query: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360
           LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL
Sbjct: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360

Query: 361 IALSNYIAYRQN 372
           IALSNYIAYRQN
Sbjct: 361 IALSNYIAYRQN 372

[Close]

BLAST of Cp4.1LG19g11640 vs. NCBI nr
Match: XP_022962891.1 (geranylgeranyl pyrophosphate synthase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 706 bits (1823), Expect = 4.99e-256
Identity = 369/372 (99.19%), Postives = 370/372 (99.46%), Query Frame = 0


Query: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60
           MSSVSFANPLIQSNSV NNSQKFN KSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR
Sbjct: 1   MSSVSFANPLIQSNSVLNNSQKFNQKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60

Query: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120
           VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK
Sbjct: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120

Query: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180
           RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF
Sbjct: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180

Query: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240
           GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE
Sbjct: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240

Query: 241 GSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300
           GSNDVGLELLEYIHVHKTAALLEAAAVMGAI+GGGSNTEVEKVRKFARQIGLLFQVVDDI
Sbjct: 241 GSNDVGLELLEYIHVHKTAALLEAAAVMGAIIGGGSNTEVEKVRKFARQIGLLFQVVDDI 300

Query: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360
           LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL
Sbjct: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360

Query: 361 IALSNYIAYRQN 372
           IALSNYIAYRQN
Sbjct: 361 IALSNYIAYRQN 372

[Close]

BLAST of Cp4.1LG19g11640 vs. NCBI nr
Match: XP_023004074.1 (geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 706 bits (1822), Expect = 7.08e-256
Identity = 367/372 (98.66%), Postives = 371/372 (99.73%), Query Frame = 0


Query: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60
           MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR
Sbjct: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60

Query: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120
           VETELRPVVE+NDQKG+FSFK YMVQKA+LVNQALNDAVSLRDPLKIHEAMRYSLLAGGK
Sbjct: 61  VETELRPVVEENDQKGIFSFKHYMVQKADLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120

Query: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180
           RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF
Sbjct: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180

Query: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240
           GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE
Sbjct: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240

Query: 241 GSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300
           GSNDVGLELLEYIH+HKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI
Sbjct: 241 GSNDVGLELLEYIHIHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300

Query: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360
           LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL
Sbjct: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360

Query: 361 IALSNYIAYRQN 372
           IALSNYIAYRQN
Sbjct: 361 IALSNYIAYRQN 372

[Close]

BLAST of Cp4.1LG19g11640 vs. NCBI nr
Match: KAG7027100.1 (Geranylgeranyl pyrophosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 705 bits (1819), Expect = 2.03e-255
Identity = 369/372 (99.19%), Postives = 369/372 (99.19%), Query Frame = 0


Query: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60
           MSSVSFANPLIQSNSV NNSQKFN KSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR
Sbjct: 1   MSSVSFANPLIQSNSVLNNSQKFNQKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60

Query: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120
           VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK
Sbjct: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120

Query: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180
           RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF
Sbjct: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180

Query: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240
           GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE
Sbjct: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240

Query: 241 GSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300
           GS DVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI
Sbjct: 241 GSTDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300

Query: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360
           LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL
Sbjct: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360

Query: 361 IALSNYIAYRQN 372
           IALSNYIAYRQN
Sbjct: 361 IALSNYIAYRQN 372

[Close]

BLAST of Cp4.1LG19g11640 vs. NCBI nr
Match: XP_038883208.1 (geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 564 bits (1453), Expect = 1.22e-199
Identity = 294/370 (79.46%), Postives = 329/370 (88.92%), Query Frame = 0


Query: 3   SVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTRVE 62
           SV+FANPLIQS+SVFNNS K  P SF  LHP N  SS SSK IK P  +  +SA  T  +
Sbjct: 4   SVNFANPLIQSSSVFNNSHKLKPNSFFVLHPLNSPSSVSSKFIKNPFSHRPLSAVLTGEQ 63

Query: 63  TELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRV 122
           T+L+  V +NDQK    F+DYM+QKANLVNQALNDAV LRDPLKIHEAMRYSLLAGGKRV
Sbjct: 64  TDLQSEVGKNDQKAPIRFRDYMLQKANLVNQALNDAVLLRDPLKIHEAMRYSLLAGGKRV 123

Query: 123 RPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMFGE 182
           RPVLCLAAC+LVGGSESAA+PAAC+ EMIHTMSLIHDDLPCMDNDDLRRG+PT+HR+FGE
Sbjct: 124 RPVLCLAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGRPTNHRIFGE 183

Query: 183 DIAILAGDALLAFAFEHIAVA-TEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSEG 242
           D+A+LAGDALL+FAFEH+A A T A VSPERVV+AIGELAKATGT GLVAGQVVDIDSEG
Sbjct: 184 DVAVLAGDALLSFAFEHLAAAATAAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEG 243

Query: 243 SNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDIL 302
           +NDVGLELLE+IHVHKTAALLEAAAV+GAI+GGGS  EVEK+RKFAR++GLLFQVVDDIL
Sbjct: 244 ANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFARRVGLLFQVVDDIL 303

Query: 303 DVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPLI 362
           DVTKS+EELGKTAGKD+AA+KATYPKL+GIEKSKEFAE L++EA E LAGFDP KA PLI
Sbjct: 304 DVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAVPLI 363

Query: 363 ALSNYIAYRQ 371
           AL+NYIAYRQ
Sbjct: 364 ALTNYIAYRQ 373

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy TrEMBL
Match: A0A6J1HEJ9 (geranylgeranyl pyrophosphate synthase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463257 PE=3 SV=1)

HSP 1 Score: 706 bits (1823), Expect = 2.41e-256
Identity = 369/372 (99.19%), Postives = 370/372 (99.46%), Query Frame = 0


Query: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60
           MSSVSFANPLIQSNSV NNSQKFN KSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR
Sbjct: 1   MSSVSFANPLIQSNSVLNNSQKFNQKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60

Query: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120
           VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK
Sbjct: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120

Query: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180
           RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF
Sbjct: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180

Query: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240
           GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE
Sbjct: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240

Query: 241 GSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300
           GSNDVGLELLEYIHVHKTAALLEAAAVMGAI+GGGSNTEVEKVRKFARQIGLLFQVVDDI
Sbjct: 241 GSNDVGLELLEYIHVHKTAALLEAAAVMGAIIGGGSNTEVEKVRKFARQIGLLFQVVDDI 300

Query: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360
           LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL
Sbjct: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360

Query: 361 IALSNYIAYRQN 372
           IALSNYIAYRQN
Sbjct: 361 IALSNYIAYRQN 372

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy TrEMBL
Match: A0A6J1KV66 (geranylgeranyl pyrophosphate synthase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111497495 PE=3 SV=1)

HSP 1 Score: 706 bits (1822), Expect = 3.43e-256
Identity = 367/372 (98.66%), Postives = 371/372 (99.73%), Query Frame = 0


Query: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60
           MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR
Sbjct: 1   MSSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTR 60

Query: 61  VETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120
           VETELRPVVE+NDQKG+FSFK YMVQKA+LVNQALNDAVSLRDPLKIHEAMRYSLLAGGK
Sbjct: 61  VETELRPVVEENDQKGIFSFKHYMVQKADLVNQALNDAVSLRDPLKIHEAMRYSLLAGGK 120

Query: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180
           RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF
Sbjct: 121 RVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMF 180

Query: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240
           GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE
Sbjct: 181 GEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSE 240

Query: 241 GSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300
           GSNDVGLELLEYIH+HKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI
Sbjct: 241 GSNDVGLELLEYIHIHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDI 300

Query: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360
           LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL
Sbjct: 301 LDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPL 360

Query: 361 IALSNYIAYRQN 372
           IALSNYIAYRQN
Sbjct: 361 IALSNYIAYRQN 372

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy TrEMBL
Match: A0A5D3CM11 (Geranylgeranyl pyrophosphate synthase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005490 PE=3 SV=1)

HSP 1 Score: 557 bits (1436), Expect = 2.55e-197
Identity = 298/374 (79.68%), Postives = 330/374 (88.24%), Query Frame = 0


Query: 2   SSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPW-NPLSSF-SSKSIKKPSFNLRISAAQT 61
           SS +F NPLI S+SVF NS K   KS   LHP  +P+S    SKSIK PS    +SA  T
Sbjct: 3   SSFNFTNPLIHSSSVFTNSHKSKSKSSFLLHPLTSPISLLIPSKSIKTPSSRRPLSAVLT 62

Query: 62  RVETELRPVVEQND-QKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAG 121
             +TEL+P +EQND Q   F FKDYM+QKANLVNQALNDAVSL+DPLKIHEAMRYSLLAG
Sbjct: 63  TEQTELQPKLEQNDDQNPSFRFKDYMIQKANLVNQALNDAVSLQDPLKIHEAMRYSLLAG 122

Query: 122 GKRVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHR 181
           GKRVRPVLCLAAC+LVGG ESAA+PAAC+ EMIHTMSLIHDDLPCMDNDDLRRGKPT+HR
Sbjct: 123 GKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHR 182

Query: 182 MFGEDIAILAGDALLAFAFEHIAVA-TEAGVSPERVVQAIGELAKATGTSGLVAGQVVDI 241
           MFGED+A+LAGDALL+FAFEH+A A T AGVSPERVV+AIGELAKATG+ GLVAGQVVDI
Sbjct: 183 MFGEDVAVLAGDALLSFAFEHMAAAVTAAGVSPERVVRAIGELAKATGSGGLVAGQVVDI 242

Query: 242 DSEGSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVV 301
           +SEG+NDVGLELLEYIHVHKTAALLEAAAV+GAI+GGGS  E+EK+R FAR+IGLLFQVV
Sbjct: 243 ESEGANDVGLELLEYIHVHKTAALLEAAAVIGAIVGGGSEEEIEKLRIFARRIGLLFQVV 302

Query: 302 DDILDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKA 361
           DDILDVTKS+EELGKTAGKD+AA+KATYPKL+GIEKSKEFAETL+ EA EALAGFDP KA
Sbjct: 303 DDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAETLREEAVEALAGFDPVKA 362

Query: 362 EPLIALSNYIAYRQ 371
           EPLIALSNYIAYRQ
Sbjct: 363 EPLIALSNYIAYRQ 376

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy TrEMBL
Match: A0A1S3B016 (geranylgeranyl pyrophosphate synthase 7, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103484704 PE=3 SV=1)

HSP 1 Score: 557 bits (1436), Expect = 2.55e-197
Identity = 298/374 (79.68%), Postives = 330/374 (88.24%), Query Frame = 0


Query: 2   SSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPW-NPLSSF-SSKSIKKPSFNLRISAAQT 61
           SS +F NPLI S+SVF NS K   KS   LHP  +P+S    SKSIK PS    +SA  T
Sbjct: 3   SSFNFTNPLIHSSSVFTNSHKSKSKSSFLLHPLTSPISLLIPSKSIKTPSSRRPLSAVLT 62

Query: 62  RVETELRPVVEQND-QKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAG 121
             +TEL+P +EQND Q   F FKDYM+QKANLVNQALNDAVSL+DPLKIHEAMRYSLLAG
Sbjct: 63  TEQTELQPKLEQNDDQNPSFRFKDYMIQKANLVNQALNDAVSLQDPLKIHEAMRYSLLAG 122

Query: 122 GKRVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHR 181
           GKRVRPVLCLAAC+LVGG ESAA+PAAC+ EMIHTMSLIHDDLPCMDNDDLRRGKPT+HR
Sbjct: 123 GKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHR 182

Query: 182 MFGEDIAILAGDALLAFAFEHIAVA-TEAGVSPERVVQAIGELAKATGTSGLVAGQVVDI 241
           MFGED+A+LAGDALL+FAFEH+A A T AGVSPERVV+AIGELAKATG+ GLVAGQVVDI
Sbjct: 183 MFGEDVAVLAGDALLSFAFEHMAAAVTAAGVSPERVVRAIGELAKATGSGGLVAGQVVDI 242

Query: 242 DSEGSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVV 301
           +SEG+NDVGLELLEYIHVHKTAALLEAAAV+GAI+GGGS  E+EK+R FAR+IGLLFQVV
Sbjct: 243 ESEGANDVGLELLEYIHVHKTAALLEAAAVIGAIVGGGSEEEIEKLRIFARRIGLLFQVV 302

Query: 302 DDILDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKA 361
           DDILDVTKS+EELGKTAGKD+AA+KATYPKL+GIEKSKEFAETL+ EA EALAGFDP KA
Sbjct: 303 DDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAETLREEAVEALAGFDPVKA 362

Query: 362 EPLIALSNYIAYRQ 371
           EPLIALSNYIAYRQ
Sbjct: 363 EPLIALSNYIAYRQ 376

[Close]

BLAST of Cp4.1LG19g11640 vs. ExPASy TrEMBL
Match: A0A0A0KFZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487640 PE=3 SV=1)

HSP 1 Score: 556 bits (1432), Expect = 9.64e-197
Identity = 297/373 (79.62%), Postives = 331/373 (88.74%), Query Frame = 0


Query: 2   SSVSFANPLIQSNSVFNNSQKFNPKSFSFLHPW-NPLSSF-SSKSIKKPSFNLRISAAQT 61
           SS++F NPLIQS+SVF NS KF    F  LHP  +P+S   SSKS K  S    ISAA T
Sbjct: 3   SSLNFTNPLIQSSSVFTNSHKFKSNPFFLLHPLTSPISLLISSKSTKNSSSRRPISAALT 62

Query: 62  RVETELRPVVEQND-QKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAG 121
             +TEL P +EQND Q   F F+DYM+QK+NLVNQAL++AVSL+DPLKIHEAMRYSLLAG
Sbjct: 63  TEQTELHPQLEQNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAG 122

Query: 122 GKRVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHR 181
           GKRVRPVLCLAAC+LVGGSESAA+PAAC+ EMIHTMSLIHDDLPCMDNDDLRRGKPT+HR
Sbjct: 123 GKRVRPVLCLAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHR 182

Query: 182 MFGEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDID 241
           MFGED+A+LAGDALL+FAFEH+A AT+A VSPERVV+AIGELAKATGT GLVAGQVVDID
Sbjct: 183 MFGEDVAVLAGDALLSFAFEHMA-ATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDID 242

Query: 242 SEGSNDVGLELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVD 301
           SEG++DVGLELLEYIHVHKTAALLEAAAVMGAI+GGGS  E+EK+R FAR+IGLLFQVVD
Sbjct: 243 SEGADDVGLELLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVD 302

Query: 302 DILDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAE 361
           DILDVTKS+EELGKTAGKD+AA+KATYPKL+GIEKSKEFAE L+ EA EALAGFDP KAE
Sbjct: 303 DILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAE 362

Query: 362 PLIALSNYIAYRQ 371
           PLIALSNYIAYRQ
Sbjct: 363 PLIALSNYIAYRQ 374

[Close]

BLAST of Cp4.1LG19g11640 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 452.2 bits (1162), Expect = 4.0e-127
Identity = 240/337 (71.22%), Postives = 278/337 (82.49%), Query Frame = 0


Query: 39  SFSSKSIKKPSFNLRISAAQTRVETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDA 98
           SF SK     S ++  S+  T+ E  LR       +   F F  Y++ KA LVN+AL+ A
Sbjct: 41  SFRSKRTVSSSSSIVSSSVVTK-EDNLR-----QSEPSSFDFMSYIITKAELVNKALDSA 100

Query: 99  VSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIH 158
           V LR+PLKIHEAMRYSLLAGGKRVRPVLC+AACELVGG ES AMPAACA EMIHTMSLIH
Sbjct: 101 VPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIH 160

Query: 159 DDLPCMDNDDLRRGKPTSHRMFGEDIAILAGDALLAFAFEHIAVATEAG-VSPERVVQAI 218
           DDLPCMDNDDLRRGKPT+H++FGED+A+LAGDALL+FAFEH+A AT +  VSP RVV+A+
Sbjct: 161 DDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAV 220

Query: 219 GELAKATGTSGLVAGQVVDIDSEG--SNDVGLELLEYIHVHKTAALLEAAAVMGAILGGG 278
           GELAKA GT GLVAGQVVDI SEG   NDVGLE LE+IH+HKTAALLEA+AV+GAI+GGG
Sbjct: 221 GELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGG 280

Query: 279 SNTEVEKVRKFARQIGLLFQVVDDILDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSK 338
           S+ E+E++RKFAR IGLLFQVVDDILDVTKSS+ELGKTAGKDL ADK TYPK++G+EKS+
Sbjct: 281 SDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSR 340

Query: 339 EFAETLKREAGEALAGFDPAKAEPLIALSNYIAYRQN 373
           EFAE L REA + L GFD  K  PL+AL+NYIAYRQN
Sbjct: 341 EFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371

[Close]

BLAST of Cp4.1LG19g11640 vs. TAIR 10
Match: AT2G18620.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 439.1 bits (1128), Expect = 3.5e-123
Identity = 223/297 (75.08%), Postives = 260/297 (87.54%), Query Frame = 0


Query: 78  FSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACELVGGS 137
           F F  YM+ KAN VN+AL+ AVSLR+P+KIHEA+RYSLLA GKRVRPVLC+AACELVGG 
Sbjct: 53  FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGE 112

Query: 138 ESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMFGEDIAILAGDALLAFAF 197
           ES A+PAACA EMIHTMSLIHDDLPCMDNDDLRRGKPT+H++FGED+A+LAGDAL++FAF
Sbjct: 113 ESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAF 172

Query: 198 EHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSEG--SNDVGLELLEYIHV 257
           EH+A +T   VSP RVV+AIGELAKA G+ GLVAGQVVD+ S G   NDVGLE+LE+IHV
Sbjct: 173 EHLATST--AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHV 232

Query: 258 HKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDILDVTKSSEELGKTAG 317
           HKTA LLEAA V+GAI+GGGS+ EVEK+R+FAR IGLLFQVVDDILDVTKSSEELGKTAG
Sbjct: 233 HKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAG 292

Query: 318 KDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPLIALSNYIAYRQN 373
           KDL ADK TYPKL+G+EKSK+FA+ L  +A E L GFD ++ +PL+AL+NYIA RQN
Sbjct: 293 KDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347

[Close]

BLAST of Cp4.1LG19g11640 vs. TAIR 10
Match: AT3G29430.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 410.2 bits (1053), Expect = 1.7e-114
Identity = 214/341 (62.76%), Postives = 270/341 (79.18%), Query Frame = 0


Query: 34  WNPLSSFSSKSIKKPSFNLRISAAQTRVETELRPVVEQNDQKGVFSFKDYMVQKANLVNQ 93
           +N LSSF+  +++K +      A  ++    + P  + ND+   F FK YM++KA  V+ 
Sbjct: 19  YNSLSSFN--NLQKRTVLSLSCALSSQGGDMIPPEGKSNDRNSAFDFKSYMIRKAESVSA 78

Query: 94  ALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACELVGGSESAAMPAACATEMIHT 153
           ALN +V L++PL I EA+RYSLLAGGKRVRP+LC+AACELVGG E+ AM AACA EMIHT
Sbjct: 79  ALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHT 138

Query: 154 MSLIHDDLPCMDNDDLRRGKPTSHRMFGEDIAILAGDALLAFAFEHIAVATEAGVSPERV 213
            SLIHDDLPCMD+ DLRRGKPT+H+ FGED+A+LAGDALLA AFEH+   +   V+PER+
Sbjct: 139 SSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLVAPERM 198

Query: 214 VQAIGELAKATGTSGLVAGQVVDIDSEGSN--DVGLELLEYIHVHKTAALLEAAAVMGAI 273
           ++A+ ELAKA GT GLVAGQV D+ S+G N  DVGLE LE+IH+HKTAALLEAAAV+GAI
Sbjct: 199 IRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAAVLGAI 258

Query: 274 LGGGSNTEVEKVRKFARQIGLLFQVVDDILDVTKSSEELGKTAGKDLAADKATYPKLLGI 333
           +GGG+  E+EK+RK+AR IGLLFQVVDDILDVT+S++ELGKTAGKD+ A K TYP+L+G+
Sbjct: 259 MGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIGL 318

Query: 334 EKSKEFAETLKREAGEALAGFDPAKAEPLIALSNYIAYRQN 373
           E+S+E AE L+REA E L GFD  KA PL+AL++YIA R N
Sbjct: 319 ERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACRHN 357

[Close]

BLAST of Cp4.1LG19g11640 vs. TAIR 10
Match: AT3G14550.1 (geranylgeranyl pyrophosphate synthase 3 )

HSP 1 Score: 408.3 bits (1048), Expect = 6.6e-114
Identity = 215/336 (63.99%), Postives = 267/336 (79.46%), Query Frame = 0


Query: 41  SSKSIKKPSFNLRISAAQTRV--ETELRPVVEQNDQKGVFSFKDYMVQKANLVNQALNDA 100
           S KS+KK +  L  S+A T       + P  + ND    F FK YM++KA  VN AL+ +
Sbjct: 26  SVKSLKKRT-GLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKLYMIRKAESVNAALDVS 85

Query: 101 VSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACELVGGSESAAMPAACATEMIHTMSLIH 160
           V LR+PL + EA+RYSLLAGGKRVRP+LC+A CELVGG E+ AM AACA EMIHT SLIH
Sbjct: 86  VPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIH 145

Query: 161 DDLPCMDNDDLRRGKPTSHRMFGEDIAILAGDALLAFAFEHIAVATEAGVSPERVVQAIG 220
           DDLPCMDN DLRRGKPT+H+++GED+A+LAGDALLA AFEH+   +   V+PER+++A+ 
Sbjct: 146 DDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSGLVAPERMIRAVV 205

Query: 221 ELAKATGTSGLVAGQVVDIDSEGSN--DVGLELLEYIHVHKTAALLEAAAVMGAILGGGS 280
           ELA+A GT+GLVAGQ++D+ SE  N   VGLE LE+IH+HKTAALLEAAAV+G I+GGG+
Sbjct: 206 ELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGT 265

Query: 281 NTEVEKVRKFARQIGLLFQVVDDILDVTKSSEELGKTAGKDLAADKATYPKLLGIEKSKE 340
             E+EK+RK+AR IGLLFQVVDDILDVTKS+EELGKTAGKD+ A K TYP+L+G+E+SKE
Sbjct: 266 EEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKE 325

Query: 341 FAETLKREAGEALAGFDPAKAEPLIALSNYIAYRQN 373
            AE L+REA E L GFDP+KA PL+AL++YIA R N
Sbjct: 326 VAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360

[Close]

BLAST of Cp4.1LG19g11640 vs. TAIR 10
Match: AT3G14530.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 407.9 bits (1047), Expect = 8.7e-114
Identity = 220/366 (60.11%), Postives = 280/366 (76.50%), Query Frame = 0


Query: 11  IQSNSVFNNSQKFNPKSFSFLHPWNPLSSFSSKSIKKPSFNLRISAAQTRVET--ELRPV 70
           + S+S+F+ S+     S S           S KS++K +  L +S+A T  +    ++P 
Sbjct: 7   LSSSSLFSQSRGRRDNSIS-----------SVKSLRKRTV-LSLSSALTSQDAGHMIQPE 66

Query: 71  VEQNDQKGVFSFKDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCL 130
            + ND    F FK YM++KA  VN AL+ +V L  PL I EA+RYSLLAGGKRVRP+LC+
Sbjct: 67  GKSNDNNSAFDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCI 126

Query: 131 AACELVGGSESAAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTSHRMFGEDIAILA 190
           AACELVGG E+ AM AACA EMIHT SLIHDDLPCMDN DLRRGKPT+H+++GED+A+LA
Sbjct: 127 AACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLA 186

Query: 191 GDALLAFAFEHIAVATEAGVSPERVVQAIGELAKATGTSGLVAGQVVDIDSEGSN--DVG 250
           GDALLA AFEH+ V +   V+PE++++A+ ELA+A GT+GLVAGQ++D+ SE  N   VG
Sbjct: 187 GDALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVG 246

Query: 251 LELLEYIHVHKTAALLEAAAVMGAILGGGSNTEVEKVRKFARQIGLLFQVVDDILDVTKS 310
           LE LE+IH+HKTAALLEAAAV+G I+GGG+  E+EK+RK+AR IGLLFQVVDDILDVTKS
Sbjct: 247 LEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKS 306

Query: 311 SEELGKTAGKDLAADKATYPKLLGIEKSKEFAETLKREAGEALAGFDPAKAEPLIALSNY 370
           +EELGKTAGKD+ A K TYP+L+G+E S+E AE L+REA E L GFDP+KA PL+AL++Y
Sbjct: 307 TEELGKTAGKDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASY 360

Query: 371 IAYRQN 373
           IA R N
Sbjct: 367 IACRHN 360

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g11640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94ID7	1.5e-131	67.55	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]
Q42698	2.3e-127	69.45	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus OX=4...	[more]
P34802	5.6e-126	71.22	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
Q43133	3.8e-122	64.58	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]
Q9ZU77	4.9e-122	75.08	Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Cp4.1LG19g11640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518151.1	1.82e-258	100.00	geranylgeranyl pyrophosphate synthase, chloroplastic [Cucurbita pepo subsp. pepo...	[more]
XP_022962891.1	4.99e-256	99.19	geranylgeranyl pyrophosphate synthase, chloroplastic [Cucurbita moschata]	[more]
XP_023004074.1	7.08e-256	98.66	geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucurbita maxima]	[more]
KAG7027100.1	2.03e-255	99.19	Geranylgeranyl pyrophosphate synthase, chloroplastic, partial [Cucurbita argyros...	[more]
XP_038883208.1	1.22e-199	79.46	geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG19g11640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEJ9	2.41e-256	99.19	geranylgeranyl pyrophosphate synthase, chloroplastic OS=Cucurbita moschata OX=36...	[more]
A0A6J1KV66	3.43e-256	98.66	geranylgeranyl pyrophosphate synthase, chloroplastic-like OS=Cucurbita maxima OX...	[more]
A0A5D3CM11	2.55e-197	79.68	Geranylgeranyl pyrophosphate synthase 7 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3B016	2.55e-197	79.68	geranylgeranyl pyrophosphate synthase 7, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A0A0KFZ6	9.64e-197	79.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487640 PE=3 SV=1	[more]

BLAST of Cp4.1LG19g11640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36810.1	4.0e-127	71.22	geranylgeranyl pyrophosphate synthase 1	[more]
AT2G18620.1	3.5e-123	75.08	Terpenoid synthases superfamily protein	[more]
AT3G29430.1	1.7e-114	62.76	Terpenoid synthases superfamily protein	[more]
AT3G14550.1	6.6e-114	63.99	geranylgeranyl pyrophosphate synthase 3	[more]
AT3G14530.1	8.7e-114	60.11	Terpenoid synthases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 107..343 e-value: 1.0E-57 score: 195.2
IPR000092	Polyprenyl synthetase	CDD	cd00685	Trans_IPPS_HT	coord: 107..370 e-value: 3.83895E-94 score: 280.206
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 72..372 e-value: 2.0E-107 score: 360.7
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 80..352
None	No IPR available	SFLD	SFLDS00005	Isoprenoid_Synthase_Type_I	coord: 83..370 e-value: 0.0 score: 289.9
None	No IPR available	SFLD	SFLDG01017	Polyprenyl_Transferase_Like	coord: 83..370 e-value: 0.0 score: 289.9
None	No IPR available	PANTHER	PTHR43281:SF21	GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE	coord: 1..372
None	No IPR available	PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	coord: 1..372
IPR033749	Polyprenyl synthetase, conserved site	PROSITE	PS00723	POLYPRENYL_SYNTHASE_1	coord: 156..172
IPR033749	Polyprenyl synthetase, conserved site	PROSITE	PS00444	POLYPRENYL_SYNTHASE_2	coord: 290..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g11640.1	Cp4.1LG19g11640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
molecular_function	GO:0004311	farnesyltranstransferase activity