Cp4.1LG19g10810 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g10810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor DIVARICATA-like
Location	Cp4.1LG19: 5362216 .. 5363279 (-)
RNA-Seq Expression	Cp4.1LG19g10810
Synteny	Cp4.1LG19g10810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCCCCTCCCCCTTCAAATTCCCATCCCTCCCGAGTTCCCTTTCTCGGAATTCTGCTGCCCCTCCTTTCTGTCAGCCCCGCGACGAGGAGGCCAATGGAAGCCCCTTCTTCTTCCTTCGGCCTTCTCGACCATTATTGGAGCCCCACCACTTCAATTCCTTCTCCCACTCCCTGGACTCGCCACCAGGACAAGATTTTCGAGCACGCTCTCGTCATGGTGCCGGAGAATTCTCCCAACCGTTGGATGAAGATCGCCGGTCTTGTTCCTGGTAAATCAGCGGCCGAGGTTAGAGACCATTACGACGCCTTGGTCTCTGACGTACAGAAGATCGACTCTGGACGAGTTGAACTACCGAACTATGCCGATGAGTCGTTGTCGAGTTCGCCGGAGAGGGAATCGCCGTGTCAGCTGCCGGAGAAAGCGTCTGAGAGGAAGAAGGGGAAACCCTGGACCAAAAAAGAACACCAGTAGGTTCATTTCCTATACATAAAGCCTCTCCAACATGCTTCATGTCAAATTTTCACTGTCGGATCACGAAAATCACACCTTTATTAGAATTTATACTCAAACTTGATAATATTATATGACGTAGAGAGTCGTATTGATCTAACATAGTATCAAAATATACTTTGATTATAAACTCATAATTATTCCCTAAATTAAAATACGGCTGGACTTTCATCATCCAACGTTATTATTATACTAAAAAAAGTTATAAAATTGGCAGGCTGTTTTTATTGGGGCTGAAGAAATTTGGAAAGGGCGATTGGAGAAGTATTTCCAGAAACGTGGTGATTACGAGAACGCCAACTCAAGTAGCTAGCCATGCCCAGAAGTATTTTCTACGCCAAGAGTCGGCAAAGAAAGACCGGAAGAGATCCAGCATACATGACATCACCACCGTAGAAGGCAATTTAGTAACGGCGGTGGCTGCAACCAGTCAAGGTCAATTGAGTATTTTTTCATTAACTCACTCGCCGTCGCCGTCATTCCCGCTGCCGCTGCCACACCAATTTTCACCTGCAAGCTATTTTCCAAACCAGAGAAGCTTGCTAGATTAC

mRNA sequence

TACCCCCCTCCCCCTTCAAATTCCCATCCCTCCCGAGTTCCCTTTCTCGGAATTCTGCTGCCCCTCCTTTCTGTCAGCCCCGCGACGAGGAGGCCAATGGAAGCCCCTTCTTCTTCCTTCGGCCTTCTCGACCATTATTGGAGCCCCACCACTTCAATTCCTTCTCCCACTCCCTGGACTCGCCACCAGGACAAGATTTTCGAGCACGCTCTCGTCATGGTGCCGGAGAATTCTCCCAACCGTTGGATGAAGATCGCCGGTCTTGTTCCTGGTAAATCAGCGGCCGAGGTTAGAGACCATTACGACGCCTTGGTCTCTGACGTACAGAAGATCGACTCTGGACGAGTTGAACTACCGAACTATGCCGATGAGTCGTTGTCGAGTTCGCCGGAGAGGGAATCGCCGTGTCAGCTGCCGGAGAAAGCGTCTGAGAGGAAGAAGGGGAAACCCTGGACCAAAAAAGAACACCAAAACGTGGTGATTACGAGAACGCCAACTCAAGTAGCTAGCCATGCCCAGAAGTATTTTCTACGCCAAGAGTCGGCAAAGAAAGACCGGAAGAGATCCAGCATACATGACATCACCACCGTAGAAGGCAATTTAGTAACGGCGGTGGCTGCAACCAGTCAAGGTCAATTGAGTATTTTTTCATTAACTCACTCGCCGTCGCCGTCATTCCCGCTGCCGCTGCCACACCAATTTTCACCTGCAAGCTATTTTCCAAACCAGAGAAGCTTGCTAGATTAC

Coding sequence (CDS)

ATGGAAGCCCCTTCTTCTTCCTTCGGCCTTCTCGACCATTATTGGAGCCCCACCACTTCAATTCCTTCTCCCACTCCCTGGACTCGCCACCAGGACAAGATTTTCGAGCACGCTCTCGTCATGGTGCCGGAGAATTCTCCCAACCGTTGGATGAAGATCGCCGGTCTTGTTCCTGGTAAATCAGCGGCCGAGGTTAGAGACCATTACGACGCCTTGGTCTCTGACGTACAGAAGATCGACTCTGGACGAGTTGAACTACCGAACTATGCCGATGAGTCGTTGTCGAGTTCGCCGGAGAGGGAATCGCCGTGTCAGCTGCCGGAGAAAGCGTCTGAGAGGAAGAAGGGGAAACCCTGGACCAAAAAAGAACACCAAAACGTGGTGATTACGAGAACGCCAACTCAAGTAGCTAGCCATGCCCAGAAGTATTTTCTACGCCAAGAGTCGGCAAAGAAAGACCGGAAGAGATCCAGCATACATGACATCACCACCGTAGAAGGCAATTTAGTAACGGCGGTGGCTGCAACCAGTCAAGGTCAATTGAGTATTTTTTCATTAACTCACTCGCCGTCGCCGTCATTCCCGCTGCCGCTGCCACACCAATTTTCACCTGCAAGCTATTTTCCAAACCAGAGAAGCTTGCTAGATTAC

Protein sequence

MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWTKKEHQNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY

Homology

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BLAST of Cp4.1LG19g10810 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.2e-28
Identity = 81/199 (40.70%), Postives = 106/199 (53.27%), Query Frame = 0


Query: 3   APSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSA 62
           APSS F     +   +    S T WT  ++K FE+AL +  EN+PNRW ++A  VPGK+ 
Sbjct: 5   APSSYFSSSSWFLEESR---STTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTV 64

Query: 63  AEVRDHYDALVSDVQKIDSGRVELPNYADES-----------------LSSSPERESPCQ 122
            +V   Y  L  DV  I++G V +P Y+  S                    +  R+S   
Sbjct: 65  GDVMRQYKELEDDVSSIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSG 124

Query: 123 LPEKASERKKGKPWTKKEH-------------------QNVVITRTPTQVASHAQKYFLR 166
            P +  ERKKG PWT++EH                   +N VITRTPTQVASHAQKYF+R
Sbjct: 125 RPSE-QERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIR 184

[Close]

BLAST of Cp4.1LG19g10810 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27
Identity = 82/191 (42.93%), Postives = 102/191 (53.40%), Query Frame = 0


Query: 27  WTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAAEVRDHYDALVSDVQKIDSGRVEL 86
           W+R  D  FE AL    + S  RW KIA  VPGKS  ++++HY+ LV DV +I+SG V L
Sbjct: 12  WSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPL 71

Query: 87  PNY----------ADESLSSSPERESPCQLPEKA------SERKKGKPWTKKEH------ 146
           P Y           DE  SS     S      +A       ER+KG  WT+ EH      
Sbjct: 72  PAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTEDEHRLFLLG 131

Query: 147 -------------QNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVT 183
                        +N V+TRTPTQVASHAQKYF+R  S  KDR+RSSIHDIT+V GN   
Sbjct: 132 LDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV-GN--- 191

[Close]

BLAST of Cp4.1LG19g10810 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-25
Identity = 85/227 (37.44%), Postives = 109/227 (48.02%), Query Frame = 0


Query: 18  TTSIPSPTPWTRHQDKIFEHALVMVPENSP-------NRWM-KIAGLVPG-KSAAEVRDH 77
           TT+  +   WTR  DK FE+AL       P       + W   +A  VPG +SA EVR H
Sbjct: 9   TTTAAAAAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRH 68

Query: 78  YDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEK------------------- 137
           Y+ALV DV  ID+GRV LP YA E  ++ P+         K                   
Sbjct: 69  YEALVEDVAAIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGGYDGG 128

Query: 138 ------ASERKKGKPWTKKEH-------------------QNVVITRTPTQVASHAQKYF 192
                   ER+KG PWT++EH                   +N VI+RTPTQVASHAQKYF
Sbjct: 129 KSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF 188

[Close]

BLAST of Cp4.1LG19g10810 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-25
Identity = 85/227 (37.44%), Postives = 109/227 (48.02%), Query Frame = 0


Query: 18  TTSIPSPTPWTRHQDKIFEHALVMVPENSP-------NRWM-KIAGLVPG-KSAAEVRDH 77
           TT+  +   WTR  DK FE+AL       P       + W   +A  VPG +SA EVR H
Sbjct: 9   TTTAAAAAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRH 68

Query: 78  YDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEK------------------- 137
           Y+ALV DV  ID+GRV LP YA E  ++ P+         K                   
Sbjct: 69  YEALVEDVAAIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGGYDGG 128

Query: 138 ------ASERKKGKPWTKKEH-------------------QNVVITRTPTQVASHAQKYF 192
                   ER+KG PWT++EH                   +N VI+RTPTQVASHAQKYF
Sbjct: 129 KSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF 188

[Close]

BLAST of Cp4.1LG19g10810 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.4e-13
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 18 TTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAAEVRDHYDALVSDVQ 77
          + S+ S   WTR ++K+FE AL    +++P+RW  +A  V GKSA EVR HY+ L+ DV 
Sbjct: 3  SNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVN 62

Query: 78 KIDSGRVELPNY 90
           I+SGR   PNY
Sbjct: 63 DIESGRYPHPNY 74

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BLAST of Cp4.1LG19g10810 vs. NCBI nr
Match: XP_023518498.1 (transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423 bits (1088), Expect = 6.70e-149
Identity = 217/236 (91.95%), Postives = 217/236 (91.95%), Query Frame = 0


Query: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60
           MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120
           SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT
Sbjct: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120

Query: 121 KKEHQ-------------------NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180
           KKEHQ                   NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD
Sbjct: 121 KKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180

Query: 181 ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY 217
           ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY
Sbjct: 181 ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY 236

[Close]

BLAST of Cp4.1LG19g10810 vs. NCBI nr
Match: XP_022963148.1 (transcription factor DIVARICATA-like [Cucurbita moschata])

HSP 1 Score: 420 bits (1080), Expect = 1.11e-147
Identity = 216/236 (91.53%), Postives = 216/236 (91.53%), Query Frame = 0


Query: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60
           MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120
           SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT
Sbjct: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120

Query: 121 KKEHQ-------------------NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180
           KKEHQ                   NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD
Sbjct: 121 KKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180

Query: 181 ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY 217
           ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPL HQFSPASYFPNQRSLLDY
Sbjct: 181 ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLTHQFSPASYFPNQRSLLDY 236

[Close]

BLAST of Cp4.1LG19g10810 vs. NCBI nr
Match: XP_023003417.1 (transcription factor DIVARICATA-like [Cucurbita maxima])

HSP 1 Score: 410 bits (1053), Expect = 1.45e-143
Identity = 212/236 (89.83%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60
           MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120
           SAAEVRDHYDALVSDVQ IDSGRVELPNYADESL SSPERESP QLPEKASERKKGKPWT
Sbjct: 61  SAAEVRDHYDALVSDVQNIDSGRVELPNYADESLLSSPERESPGQLPEKASERKKGKPWT 120

Query: 121 KKEHQ-------------------NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180
           KKEHQ                   NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD
Sbjct: 121 KKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180

Query: 181 ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY 217
           ITTVE NLVTAVAATS+GQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY
Sbjct: 181 ITTVECNLVTAVAATSEGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY 236

[Close]

BLAST of Cp4.1LG19g10810 vs. NCBI nr
Match: KAG7026935.1 (Protein RADIALIS-like 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377 bits (968), Expect = 3.14e-131
Identity = 194/217 (89.40%), Postives = 194/217 (89.40%), Query Frame = 0


Query: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60
           MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120
           SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKA          
Sbjct: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKA---------- 120

Query: 121 KKEHQNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVTAVAATSQGQ 180
                      TPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVTAVAA SQGQ
Sbjct: 121 -----------TPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVTAVAAASQGQ 180

Query: 181 LSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY 217
           LSIFSLTHSPSPSFPLPL HQFSPASYFPNQRSLLDY
Sbjct: 181 LSIFSLTHSPSPSFPLPLSHQFSPASYFPNQRSLLDY 196

[Close]

BLAST of Cp4.1LG19g10810 vs. NCBI nr
Match: KAG6594977.1 (Adenylyl-sulfate kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347 bits (891), Expect = 5.81e-115
Identity = 183/212 (86.32%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60
           MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120
           SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT
Sbjct: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120

Query: 121 KKEHQ-------------------NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180
           KKEHQ                   NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD
Sbjct: 121 KKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180

Query: 181 ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPS 193
           ITTVEGNLVTAVAATSQG   I   T S + S
Sbjct: 181 ITTVEGNLVTAVAATSQGGCPIVYETTSATSS 212

[Close]

BLAST of Cp4.1LG19g10810 vs. ExPASy TrEMBL
Match: A0A6J1HGW8 (transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC111463444 PE=4 SV=1)

HSP 1 Score: 420 bits (1080), Expect = 5.38e-148
Identity = 216/236 (91.53%), Postives = 216/236 (91.53%), Query Frame = 0


Query: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60
           MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120
           SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT
Sbjct: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120

Query: 121 KKEHQ-------------------NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180
           KKEHQ                   NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD
Sbjct: 121 KKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180

Query: 181 ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY 217
           ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPL HQFSPASYFPNQRSLLDY
Sbjct: 181 ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLTHQFSPASYFPNQRSLLDY 236

[Close]

BLAST of Cp4.1LG19g10810 vs. ExPASy TrEMBL
Match: A0A6J1KMG9 (transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033 PE=4 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 7.02e-144
Identity = 212/236 (89.83%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60
           MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWT 120
           SAAEVRDHYDALVSDVQ IDSGRVELPNYADESL SSPERESP QLPEKASERKKGKPWT
Sbjct: 61  SAAEVRDHYDALVSDVQNIDSGRVELPNYADESLLSSPERESPGQLPEKASERKKGKPWT 120

Query: 121 KKEHQ-------------------NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180
           KKEHQ                   NVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD
Sbjct: 121 KKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 180

Query: 181 ITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY 217
           ITTVE NLVTAVAATS+GQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY
Sbjct: 181 ITTVECNLVTAVAATSEGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRSLLDY 236

[Close]

BLAST of Cp4.1LG19g10810 vs. ExPASy TrEMBL
Match: A0A6J1BVC4 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111005863 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 7.87e-92
Identity = 162/243 (66.67%), Postives = 178/243 (73.25%), Query Frame = 0


Query: 4   PSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAA 63
           PS SF + D YWSP T+  SP PWTRHQDKIFEHALVMVPENSPNRW++IAGL+PGKS A
Sbjct: 5   PSPSFRVSDDYWSPKTAPSSPAPWTRHQDKIFEHALVMVPENSPNRWLRIAGLIPGKSPA 64

Query: 64  EVRDHYDALVSDVQKIDSGRVELPNYA-DESLSSSPERESPC-QLPEKAS-------ERK 123
           EV  HYDALVSD+  IDSGRVELP+YA D+S++S PE E+P   L EK S       ERK
Sbjct: 65  EVSYHYDALVSDLLDIDSGRVELPSYAEDDSVASLPETEAPPPNLSEKPSKSRPNETERK 124

Query: 124 KGKPWTKKEHQ-------------------NVVITRTPTQVASHAQKYFLRQESAKKDRK 183
           KGKPWTKKEHQ                   NVVI+RTPTQVASHAQKYFLRQESAKKDRK
Sbjct: 125 KGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVISRTPTQVASHAQKYFLRQESAKKDRK 184

Query: 184 RSSIHDITTVEGNLVTAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFP-NQRSL 217
           RSSIHDITTVEG+LV A AAT   QLS       P P +PL LPHQF+ ASYFP + RSL
Sbjct: 185 RSSIHDITTVEGSLVAA-AATDHCQLSTVPTIIQPPPPWPL-LPHQFASASYFPPDHRSL 244

[Close]

BLAST of Cp4.1LG19g10810 vs. ExPASy TrEMBL
Match: A0A0A0KJP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495660 PE=4 SV=1)

HSP 1 Score: 271 bits (694), Expect = 3.50e-89
Identity = 157/244 (64.34%), Postives = 176/244 (72.13%), Query Frame = 0


Query: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60
           ME  S SFGL      P  S+ SPTPWTRHQD +FEHALV+VP+NSP+RW+KIA LVPGK
Sbjct: 1   MEPHSPSFGLF-----PVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGK 60

Query: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADE-SLSSSPERE----SPCQLPEKAS--ER 120
           SAA+VR HYD LVSDV  IDSGRVELPNYAD+ +++ S ERE    SP  + EK S  ER
Sbjct: 61  SAADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTER 120

Query: 121 KKGKPWTKKEHQ-------------------NVVITRTPTQVASHAQKYFLRQESAKKDR 180
           KKGKPWTKKEHQ                   N VITRTPTQVASHAQKYFLRQESAKKDR
Sbjct: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDR 180

Query: 181 KRSSIHDITTVEGNLVT-AVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRS 217
           KRSSIHDITTVEG+LVT +  A  Q Q SI S+T   S SFPL + HQF+ + YFP +RS
Sbjct: 181 KRSSIHDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRS 239

[Close]

BLAST of Cp4.1LG19g10810 vs. ExPASy TrEMBL
Match: A0A1S3B1M9 (transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103484855 PE=4 SV=1)

HSP 1 Score: 268 bits (686), Expect = 1.77e-87
Identity = 155/237 (65.40%), Postives = 173/237 (73.00%), Query Frame = 0


Query: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60
           MEA SSS GLL     P TS  SPTPWTRHQD +FE ALV+VP+NSP+RW+KIA LVPGK
Sbjct: 1   MEAHSSSVGLL-----PITSFSSPTPWTRHQDDLFERALVLVPDNSPDRWIKIAALVPGK 60

Query: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADE-SLSSSPERES--PCQLPEKAS--ERKK 120
           SAA+VR HYD LVSDV  IDSGRVELPNYAD+ + + SPERE   P  + EKAS  ERKK
Sbjct: 61  SAADVRYHYDVLVSDVLNIDSGRVELPNYADDLTAARSPEREKSPPHPISEKASSSERKK 120

Query: 121 GKPWTKKEHQ-------------------NVVITRTPTQVASHAQKYFLRQESAKKDRKR 180
           GKPWTKKEHQ                   N VITRTPTQVASHAQKYFLRQESAKKDRKR
Sbjct: 121 GKPWTKKEHQLFLLGLRKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKR 180

Query: 181 SSIHDITTVEGNLV-TAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQR 212
           SSIHDITTVEGNLV T+    +Q Q +IF +T   S SFPL +PHQF+ + YFP +R
Sbjct: 181 SSIHDITTVEGNLVMTSTTVINQSQPNIFPVTQPLSSSFPLHMPHQFASSGYFPYRR 232

[Close]

BLAST of Cp4.1LG19g10810 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-40
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 0


Query: 27  WTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAAEVRDHYDALVSDVQKIDSGRVEL 86
           WTR +DK+FE ALV+ PE SPNRW +IA  +  KSA EVR+HY+ LV DV +IDSGRV++
Sbjct: 6   WTRSEDKMFEQALVLFPEGSPNRWERIADQL-HKSAGEVREHYEVLVHDVFEIDSGRVDV 65

Query: 87  PNYADESLSSSPERESPCQL----PEKASERKKGKPWTKKEH------------------ 146
           P+Y D+S +++   +S  Q+        SERK+G PWT+ EH                  
Sbjct: 66  PDYMDDSAAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSI 125

Query: 147 -QNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNL 170
            +NVV+TRTPTQVASHAQKYFLRQ S KK+RKRSSIHDITTV+  L
Sbjct: 126 SRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDATL 170

[Close]

BLAST of Cp4.1LG19g10810 vs. TAIR 10
Match: AT3G11280.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-29
Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 27  WTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAAEVRDHYDALVSDVQKIDSGRVEL 86
           WT+ ++K+FE AL +  E+SP+RW K+A ++PGK+  +V   Y  L  DV  I++GRV +
Sbjct: 33  WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPI 92

Query: 87  PNYADES----LSSSPERESPCQLPEKASERKKGKPWTKKEH------------------ 146
           P Y   S      +   R+ P        +RKKG PWT++EH                  
Sbjct: 93  PGYPAASSPLGFDTDMCRKRPSGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNI 152

Query: 147 -QNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVTA 173
            +N V+++TPTQVASHAQKY+ RQ S  KD++R SIHDITT  GNL+ A
Sbjct: 153 SRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT--GNLLNA 199

[Close]

BLAST of Cp4.1LG19g10810 vs. TAIR 10
Match: AT3G11280.2 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-29
Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 27  WTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAAEVRDHYDALVSDVQKIDSGRVEL 86
           WT+ ++K+FE AL +  E+SP+RW K+A ++PGK+  +V   Y  L  DV  I++GRV +
Sbjct: 33  WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPI 92

Query: 87  PNYADES----LSSSPERESPCQLPEKASERKKGKPWTKKEH------------------ 146
           P Y   S      +   R+ P        +RKKG PWT++EH                  
Sbjct: 93  PGYPAASSPLGFDTDMCRKRPSGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNI 152

Query: 147 -QNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVTA 173
            +N V+++TPTQVASHAQKY+ RQ S  KD++R SIHDITT  GNL+ A
Sbjct: 153 SRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT--GNLLNA 199

[Close]

BLAST of Cp4.1LG19g10810 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28
Identity = 82/191 (42.93%), Postives = 102/191 (53.40%), Query Frame = 0


Query: 27  WTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAAEVRDHYDALVSDVQKIDSGRVEL 86
           W+R  D  FE AL    + S  RW KIA  VPGKS  ++++HY+ LV DV +I+SG V L
Sbjct: 12  WSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPL 71

Query: 87  PNY----------ADESLSSSPERESPCQLPEKA------SERKKGKPWTKKEH------ 146
           P Y           DE  SS     S      +A       ER+KG  WT+ EH      
Sbjct: 72  PAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTEDEHRLFLLG 131

Query: 147 -------------QNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVT 183
                        +N V+TRTPTQVASHAQKYF+R  S  KDR+RSSIHDIT+V GN   
Sbjct: 132 LDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV-GN--- 191

[Close]

BLAST of Cp4.1LG19g10810 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-28
Identity = 77/208 (37.02%), Postives = 111/208 (53.37%), Query Frame = 0


Query: 27  WTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAAEVRDHYDALVSDVQKIDSGRVEL 86
           WT  ++K FE+AL +  +N+P+RW K+A ++PGK+ ++V   Y+ L +DV  I++G + +
Sbjct: 34  WTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPV 93

Query: 87  PNYADESLSSSP-----------------------ERESPCQLPEKASERKKGKPWTKKE 146
           P Y    ++S P                       +R    + PE   ERKKG PWT++E
Sbjct: 94  PGY----ITSPPFTLDWAGGGGGCNGFKPGHQVCNKRSQAGRSPE--LERKKGVPWTEEE 153

Query: 147 H-------------------QNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITT 185
           H                   +N VITRTPTQVASHAQKYF+RQ S  KD++R+SIHDITT
Sbjct: 154 HKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITT 213

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g10810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9H7	9.2e-28	40.70	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q9FNN6	2.7e-27	42.93	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
B8A9B2	1.9e-25	37.44	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	1.9e-25	37.44	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q6NNN0	8.4e-13	47.22	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]

BLAST of Cp4.1LG19g10810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518498.1	6.70e-149	91.95	transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963148.1	1.11e-147	91.53	transcription factor DIVARICATA-like [Cucurbita moschata]	[more]
XP_023003417.1	1.45e-143	89.83	transcription factor DIVARICATA-like [Cucurbita maxima]	[more]
KAG7026935.1	3.14e-131	89.40	Protein RADIALIS-like 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6594977.1	5.81e-115	86.32	Adenylyl-sulfate kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Cp4.1LG19g10810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGW8	5.38e-148	91.53	transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]
A0A6J1KMG9	7.02e-144	89.83	transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033...	[more]
A0A6J1BVC4	7.87e-92	66.67	transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A0A0KJP9	3.50e-89	64.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495660 PE=4 SV=1	[more]
A0A1S3B1M9	1.77e-87	65.40	transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103484855 PE=...	[more]

BLAST of Cp4.1LG19g10810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04760.1	2.2e-40	54.22	Duplicated homeodomain-like superfamily protein	[more]
AT3G11280.1	1.7e-29	42.01	Duplicated homeodomain-like superfamily protein	[more]
AT3G11280.2	1.7e-29	42.01	Duplicated homeodomain-like superfamily protein	[more]
AT5G08520.1	1.9e-28	42.93	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	7.2e-28	37.02	Homeodomain-like transcriptional regulator	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 23..75 e-value: 2.7E-6 score: 36.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 26..73 score: 6.341778
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 26..69 e-value: 9.41625E-6 score: 39.481
None	No IPR available	GENE3D	1.10.10.60		coord: 22..86 e-value: 5.6E-20 score: 72.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..122
None	No IPR available	PANTHER	PTHR44042:SF15	SYRINGOLIDE-INDUCED PROTEIN 1-3-1B	coord: 125..176 coord: 24..126
IPR043363	Transcription factor DIVARICATA-like	PANTHER	PTHR44042	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 125..176 coord: 24..126
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 25..81
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 113..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g10810.1	Cp4.1LG19g10810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding