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Cp4.1LG19g10550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCATGATCTGCTGCTGCTCGTACAAAGTCCAAGTAGCACCTCCTCAAGTTCACACGCTTGCCCATTCTCCCCCTCTCTCTCTTTCCCCTTTTATATACAACTCCTTTCCTTCCCATCCCTTTATACACTCACTTCCACAACCACGCATGGCTTCTAAATTCATCACCTTTCTCTCCCTAATCTCCCTCCTCCTCCTCCTCCTCTCCAACAGCCCGTCTGCCTACGCTGCCCGCCCCGTTCCCACCGTTTCATCCGACGCACCAGCTACCCAAATCCCAAATCAGGTTCGTTAAGAAATTTATCAATAACTTATCAACTTAAACTTTTTAGTTCTGGTAAACAATTACGAACCGATATTGACATGTTTTTTAATTGGGTTTTTATAGGGATTGGAAACAGATCAAAGTGATAGTGAGATGATGGATGAGAGGTGCCATGGAGTTGGGGAAGAAGAGTGCTTGATCAGAAGAACTCTAGCTGCCCACTTAGATTATGTGTATACTCAAAAGCATAAGCCATAGTCAAAATTCATACTTGCCTAACCATTGGCTTATATATAAACTTCTATCCATTGGCTATCTATTGGCTTATAGGGTTGAATTAATAATATTCTCTCAACTCTACCATAATTGCCACCTTTC GTCCATGATCTGCTGCTGCTCGTACAAAGTCCAAGTAGCACCTCCTCAAGTTCACACGCTTGCCCATTCTCCCCCTCTCTCTCTTTCCCCTTTTATATACAACTCCTTTCCTTCCCATCCCTTTATACACTCACTTCCACAACCACGCATGGCTTCTAAATTCATCACCTTTCTCTCCCTAATCTCCCTCCTCCTCCTCCTCCTCTCCAACAGCCCGTCTGCCTACGCTGCCCGCCCCGTTCCCACCGTTTCATCCGACGCACCAGCTACCCAAATCCCAAATCAGGGATTGGAAACAGATCAAAGTGATAGTGAGATGATGGATGAGAGGTGCCATGGAGTTGGGGAAGAAGAGTGCTTGATCAGAAGAACTCTAGCTGCCCACTTAGATTATGTGTATACTCAAAAGCATAAGCCATAGTCAAAATTCATACTTGCCTAACCATTGGCTTATATATAAACTTCTATCCATTGGCTATCTATTGGCTTATAGGGTTGAATTAATAATATTCTCTCAACTCTACCATAATTGCCACCTTTC ATGATCTGCTGCTGCTCGTACAAAGTCCAAGTAGCACCTCCTCAAGTTCACACGCTTGCCCATTCTCCCCCTCTCTCTCTTTCCCCTTTTATATACAACTCCTTTCCTTCCCATCCCTTTATACACTCACTTCCACAACCACGCATGGCTTCTAAATTCATCACCTTTCTCTCCCTAATCTCCCTCCTCCTCCTCCTCCTCTCCAACAGCCCGTCTGCCTACGCTGCCCGCCCCGTTCCCACCGTTTCATCCGACGCACCAGCTACCCAAATCCCAAATCAGGGATTGGAAACAGATCAAAGTGATAGTGAGATGATGGATGAGAGGTGCCATGGAGTTGGGGAAGAAGAGTGCTTGATCAGAAGAACTCTAGCTGCCCACTTAGATTATGTGTATACTCAAAAGCATAAGCCATAG MICCCSYKVQVAPPQVHTLAHSPPLSLSPFIYNSFPSHPFIHSLPQPRMASKFITFLSLISLLLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP Homology
BLAST of Cp4.1LG19g10550 vs. ExPASy Swiss-Prot
Match: Q9FS10 (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.2e-10 Identity = 41/90 (45.56%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. ExPASy Swiss-Prot
Match: Q9M2Y0 (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 3.6e-09 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. ExPASy Swiss-Prot
Match: Q9AR88 (Phytosulfokines 4 OS=Oryza sativa subsp. japonica OX=39947 GN=PSK4 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.2e-08 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. ExPASy Swiss-Prot
Match: Q9FEB4 (Phytosulfokines 5 OS=Arabidopsis thaliana OX=3702 GN=PSK5 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06 Identity = 37/88 (42.05%), Postives = 44/88 (50.00%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. ExPASy Swiss-Prot
Match: O81003 (Phytosulfokines 2 OS=Arabidopsis thaliana OX=3702 GN=PSK2 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06 Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. NCBI nr
Match: XP_023518620.1 (phytosulfokines-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175 bits (443), Expect = 4.00e-54 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. NCBI nr
Match: KAG6594959.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 165 bits (418), Expect = 2.50e-50 Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. NCBI nr
Match: KAG7026920.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 164 bits (414), Expect = 9.88e-50 Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. NCBI nr
Match: XP_023003386.1 (phytosulfokines-like [Cucurbita maxima]) HSP 1 Score: 162 bits (410), Expect = 4.14e-49 Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. NCBI nr
Match: XP_022963144.1 (phytosulfokines 3-like [Cucurbita moschata]) HSP 1 Score: 157 bits (396), Expect = 5.62e-47 Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. ExPASy TrEMBL
Match: A0A6J1KP44 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111497011 PE=3 SV=1) HSP 1 Score: 162 bits (410), Expect = 2.01e-49 Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. ExPASy TrEMBL
Match: A0A6J1HJ90 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111463441 PE=3 SV=1) HSP 1 Score: 157 bits (396), Expect = 2.72e-47 Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. ExPASy TrEMBL
Match: A0A6J1ILJ9 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111478122 PE=3 SV=1) HSP 1 Score: 105 bits (261), Expect = 8.22e-27 Identity = 59/91 (64.84%), Postives = 67/91 (73.63%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. ExPASy TrEMBL
Match: A0A5A7T4W2 (Phytosulfokine-beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003840 PE=3 SV=1) HSP 1 Score: 102 bits (253), Expect = 1.34e-25 Identity = 61/92 (66.30%), Postives = 66/92 (71.74%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. ExPASy TrEMBL
Match: A0A0A0KLK0 (Phytosulfokine-beta OS=Cucumis sativus OX=3659 GN=Csa_6G495850 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 6.43e-24 Identity = 61/93 (65.59%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. TAIR 10
Match: AT3G49780.1 (phytosulfokine 4 precursor ) HSP 1 Score: 62.8 bits (151), Expect = 2.5e-10 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. TAIR 10
Match: AT5G65870.1 (phytosulfokine 5 precursor ) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07 Identity = 37/88 (42.05%), Postives = 44/88 (50.00%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. TAIR 10
Match: AT2G22860.1 (phytosulfokine 2 precursor ) HSP 1 Score: 53.5 bits (127), Expect = 1.5e-07 Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. TAIR 10
Match: AT4G37720.1 (phytosulfokine 6 precursor ) HSP 1 Score: 48.1 bits (113), Expect = 6.5e-06 Identity = 30/81 (37.04%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of Cp4.1LG19g10550 vs. TAIR 10
Match: AT1G13590.1 (phytosulfokine 1 precursor ) HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04 Identity = 28/82 (34.15%), Postives = 42/82 (51.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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