Cp4.1LG19g10410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g10410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor MYB36-like
Location	Cp4.1LG19: 5482234 .. 5483409 (-)
RNA-Seq Expression	Cp4.1LG19g10410
Synteny	Cp4.1LG19g10410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACCATTATCTTGGTATTACCAAACAAATAGCTCAGACCTCAAAAGAGAAAGAACATGGGAAGAGCTCCGTGTTGTGACAAAGCCAACGTCAAAAAAGGACCTTGGTCGCCTGAGGAAGATGCCAAACTCAAAGCTTATATTGAGCAATTCGGCACCGGCGGCAACTGGATTGCCTTGCCTCAGAAAATAGGTACCAAATTTTGATTTACATCAACCCCATCAAAATGCTTTTTTTTATATCCTTAATTTTGAACTCACCAAATTGAGATTCTTAGGCCTTAAGCGATGCGGGAAGAGTTGCCGATTGAGATGGCTGAATTATCTCCGCCCCAACATCAAACATGGAGGGTTCTCAGAGGAAGAAGATAACATCATTTGTAGTCTCTACATAAGCATAGGAAGCAGGTAAATTTAGTACCTTTCTTGAAAATTCATAATTAATGAATCAATTTGAGCTGAATTTATGAGATGGGTTTTGTTTAGATGGTCCATAATTGCAGCTCAACTACCGGGAAGAACCGATAACGACATAAAAAACTACTGGAACACGAGATTAAAGAAGAAGCTTCTGGGAAAACAGCAACGTGAACAAGCAACTCTGGCTAGACGAATTCATACCCTAAACCAACCTCATACTCATACTACAACACTAAAAAGGGATGATATTGAAAAGAATTTCAATGTTATTCATCCTGATGGAGCTTCTTCAATGAATTTCAATCAAACCCCATATTTTCCAAATCCCAACACAAGCAGCCAAGAATTTAGGGATTTGATCATGAAAATGGGTGGCAGGTTTTGTTGTTCTGATCCTCCATTTCAATTGACCCAAATGGAGAATAGCATTTCACAACCCCATCAAAATCCATTACTGTTTGAAAGTTCAAATCTTGGTGAATTCTCAGCAGAGTACATGCAATTTGGAGTGGAGGATCCGACAGCAGGAATGTTCCATGGAGTTGTTGAATTTGGAGATCCATTGCAGAATAGATTTGAAAATGGGATGGAGGGTTTGTATGGGATGGGAAGTAGTTCAGCTGAAAGTAGTAGCTCTTTGGTTTATCCTCCTCCGCTTGTTTCTTCAGATTTTGAAGCTTCCCAACAAAGCTTGCCTCACAATCATGACACTCATGTTGCTGCTTTTGGTGAGTCTACGCACTATTGCCTTCTATGA

mRNA sequence

TAACCATTATCTTGGTATTACCAAACAAATAGCTCAGACCTCAAAAGAGAAAGAACATGGGAAGAGCTCCGTGTTGTGACAAAGCCAACGTCAAAAAAGGACCTTGGTCGCCTGAGGAAGATGCCAAACTCAAAGCTTATATTGAGCAATTCGGCACCGGCGGCAACTGGATTGCCTTGCCTCAGAAAATAGCAGAGTACATGCAATTTGGAGTGGAGGATCCGACAGCAGGAATGTTCCATGGAGTTGTTGAATTTGGAGATCCATTGCAGAATAGATTTGAAAATGGGATGGAGGGTTTGTATGGGATGGGAAGTAGTTCAGCTGAAAGTAGTAGCTCTTTGGTTTATCCTCCTCCGCTTGTTTCTTCAGATTTTGAAGCTTCCCAACAAAGCTTGCCTCACAATCATGACACTCATGTTGCTGCTTTTGGTGAGTCTACGCACTATTGCCTTCTATGA

Coding sequence (CDS)

ATGGGAAGAGCTCCGTGTTGTGACAAAGCCAACGTCAAAAAAGGACCTTGGTCGCCTGAGGAAGATGCCAAACTCAAAGCTTATATTGAGCAATTCGGCACCGGCGGCAACTGGATTGCCTTGCCTCAGAAAATAGCAGAGTACATGCAATTTGGAGTGGAGGATCCGACAGCAGGAATGTTCCATGGAGTTGTTGAATTTGGAGATCCATTGCAGAATAGATTTGAAAATGGGATGGAGGGTTTGTATGGGATGGGAAGTAGTTCAGCTGAAAGTAGTAGCTCTTTGGTTTATCCTCCTCCGCTTGTTTCTTCAGATTTTGAAGCTTCCCAACAAAGCTTGCCTCACAATCATGACACTCATGTTGCTGCTTTTGGTGAGTCTACGCACTATTGCCTTCTATGA

Protein sequence

MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIAEYMQFGVEDPTAGMFHGVVEFGDPLQNRFENGMEGLYGMGSSSAESSSSLVYPPPLVSSDFEASQQSLPHNHDTHVAAFGESTHYCLL

Homology

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-19
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI 46
          MGRAPCCDKANVKKGPWSPEEDAKLK+YIE  GTGGNWIALPQKI
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKI 45

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.7e-19
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI 46
          MGRAPCCDKANVKKGPWSPEED KLK YI+++GTGGNWIALPQKI
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKI 45

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.0e-18
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQK 45
          MGRAPCCDKANVK+GPWSPEEDAKLK YIE+ GTGGNWIALP K
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHK 44

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-15
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI 46
          MGRAPCCDK  VKKGPWS EEDA LK+YIE+ GTG NWI+LPQ+I
Sbjct: 1  MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRI 45

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.2e-15
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQK 45
          MGRAPCCDK  VK+GPWSPEED+KL+ YIE++G GGNWI+ P K
Sbjct: 1  MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLK 44

[Close]

BLAST of Cp4.1LG19g10410 vs. NCBI nr
Match: XP_023518735.1 (transcription factor RAX2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 207 bits (526), Expect = 9.89e-64
Identity = 134/318 (42.14%), Postives = 134/318 (42.14%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI--------------- 60
           MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI               
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 ------------------------------------------------------------ 134
                                                                       
Sbjct: 121 QQREQATLARRIHTLNQPHTHTTTLKRDDIEKNFNVIHPDGASSMNFNQTPYFPNPNTSS 180

[Close]

BLAST of Cp4.1LG19g10410 vs. NCBI nr
Match: XP_022963203.1 (transcription factor RAX2-like [Cucurbita moschata])

HSP 1 Score: 207 bits (526), Expect = 9.89e-64
Identity = 134/318 (42.14%), Postives = 134/318 (42.14%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI--------------- 60
           MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI               
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 ------------------------------------------------------------ 134
                                                                       
Sbjct: 121 QQREQAALARRIHTLNQPHTHTTTLKRDDIEKNFNVIHPDGASSMNFNQTPYFPNPNTSG 180

[Close]

BLAST of Cp4.1LG19g10410 vs. NCBI nr
Match: KAG6594948.1 (Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205 bits (522), Expect = 3.98e-63
Identity = 133/318 (41.82%), Postives = 134/318 (42.14%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI--------------- 60
           MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI               
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 ------------------------------------------------------------ 134
                                                                       
Sbjct: 121 QQREQAALARRIHTLNQPHTHTTTLKRDDIEKNFNVIHPDGASSMNFNQTPYFPNPNTSG 180

[Close]

BLAST of Cp4.1LG19g10410 vs. NCBI nr
Match: XP_023002997.1 (transcription factor MYB36-like [Cucurbita maxima])

HSP 1 Score: 199 bits (505), Expect = 1.35e-60
Identity = 132/316 (41.77%), Postives = 133/316 (42.09%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI--------------- 60
           MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI               
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 ------------------------------------------------------------ 134
                                                                       
Sbjct: 121 QQREQAALARRIHTLNQPHTTTLKRDDIEKNFNVIHPDGASSMNFNQTPYFPNPNTSGQE 180

[Close]

BLAST of Cp4.1LG19g10410 vs. NCBI nr
Match: KAG7026909.1 (Transcription factor RAX3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187 bits (475), Expect = 1.28e-55
Identity = 125/309 (40.45%), Postives = 125/309 (40.45%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI--------------- 60
           MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI               
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 ------------------------------------------------------------ 125
                                                                       
Sbjct: 121 QQREQAALARRIHTLNQPHTHTTTLKRDDIEKNFNVIHPDGASSMNFNQTPYFPNPNTSG 180

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy TrEMBL
Match: A0A6J1HH30 (transcription factor RAX2-like OS=Cucurbita moschata OX=3662 GN=LOC111463486 PE=4 SV=1)

HSP 1 Score: 207 bits (526), Expect = 4.79e-64
Identity = 134/318 (42.14%), Postives = 134/318 (42.14%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI--------------- 60
           MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI               
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 ------------------------------------------------------------ 134
                                                                       
Sbjct: 121 QQREQAALARRIHTLNQPHTHTTTLKRDDIEKNFNVIHPDGASSMNFNQTPYFPNPNTSG 180

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy TrEMBL
Match: A0A6J1KL63 (transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111496741 PE=4 SV=1)

HSP 1 Score: 199 bits (505), Expect = 6.52e-61
Identity = 132/316 (41.77%), Postives = 133/316 (42.09%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI--------------- 60
           MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI               
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 120

Query: 121 ------------------------------------------------------------ 134
                                                                       
Sbjct: 121 QQREQAALARRIHTLNQPHTTTLKRDDIEKNFNVIHPDGASSMNFNQTPYFPNPNTSGQE 180

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy TrEMBL
Match: A0A0A0KIL5 (DNA binding / transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G496960 PE=4 SV=1)

HSP 1 Score: 104 bits (259), Expect = 6.40e-27
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIAEY 48
          MGRAPCCDKANVKKGPWSPEEDAKLKAYI+QFGTGGNWIALPQKI  +
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIDQFGTGGNWIALPQKIGNF 48

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy TrEMBL
Match: A0A5K1BX32 (HTH myb-type domain-containing protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS15899 PE=4 SV=1)

HSP 1 Score: 103 bits (256), Expect = 1.45e-26
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI 45
          MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQ+GTGGNWIALPQKI
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQYGTGGNWIALPQKI 45

[Close]

BLAST of Cp4.1LG19g10410 vs. ExPASy TrEMBL
Match: A0A7J6I503 (Myb-like domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_017600 PE=4 SV=1)

HSP 1 Score: 100 bits (249), Expect = 2.53e-25
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKIAEYM 49
          MGRAPCCDKANVKKGPWSPEEDA LKAYIEQ GTGGNWIALPQKI  Y+
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDATLKAYIEQNGTGGNWIALPQKIGIYI 49

[Close]

BLAST of Cp4.1LG19g10410 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 97.4 bits (241), Expect = 9.0e-21
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI 46
          MGRAPCCDKANVKKGPWSPEEDAKLK+YIE  GTGGNWIALPQKI
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKI 45

[Close]

BLAST of Cp4.1LG19g10410 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-20
Identity = 42/45 (93.33%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI 46
          MGRAPCCDKANVKKGPWSPEEDAKLK YIE  GTGGNWIALPQKI
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKI 45

[Close]

BLAST of Cp4.1LG19g10410 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 95.9 bits (237), Expect = 2.6e-20
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI 46
          MGRAPCCDKANVKKGPWSPEED KLK YI+++GTGGNWIALPQKI
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKI 45

[Close]

BLAST of Cp4.1LG19g10410 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 4.9e-19
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQK 45
          MGRAPCCDKANVK+GPWSPEEDAKLK YIE+ GTGGNWIALP K
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHK 44

[Close]

BLAST of Cp4.1LG19g10410 vs. TAIR 10
Match: AT4G37780.1 (myb domain protein 87 )

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-16
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQFGTGGNWIALPQKI 46
          MGRAPCCDK  VKKGPWS EEDA LK+YIE+ GTG NWI+LPQ+I
Sbjct: 1  MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRI 45

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g10410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2Y9	1.3e-19	93.33	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9FKL2	3.7e-19	88.89	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
Q9SJL7	7.0e-18	88.64	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
F4JSU0	3.2e-15	77.78	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]
Q9FG68	4.2e-15	72.73	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]

BLAST of Cp4.1LG19g10410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518735.1	9.89e-64	42.14	transcription factor RAX2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963203.1	9.89e-64	42.14	transcription factor RAX2-like [Cucurbita moschata]	[more]
KAG6594948.1	3.98e-63	41.82	Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023002997.1	1.35e-60	41.77	transcription factor MYB36-like [Cucurbita maxima]	[more]
KAG7026909.1	1.28e-55	40.45	Transcription factor RAX3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG19g10410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HH30	4.79e-64	42.14	transcription factor RAX2-like OS=Cucurbita moschata OX=3662 GN=LOC111463486 PE=...	[more]
A0A6J1KL63	6.52e-61	41.77	transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111496741 PE=4...	[more]
A0A0A0KIL5	6.40e-27	91.67	DNA binding / transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G496960 PE...	[more]
A0A5K1BX32	1.45e-26	97.78	HTH myb-type domain-containing protein (Fragment) OS=Nymphaea colorata OX=210225...	[more]
A0A7J6I503	2.53e-25	89.80	Myb-like domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_017600 PE...	[more]

BLAST of Cp4.1LG19g10410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49690.1	9.0e-21	93.33	myb domain protein 84	[more]
AT5G65790.1	2.0e-20	93.33	myb domain protein 68	[more]
AT5G57620.1	2.6e-20	88.89	myb domain protein 36	[more]
AT2G36890.1	4.9e-19	88.64	Duplicated homeodomain-like superfamily protein	[more]
AT4G37780.1	2.3e-16	77.78	myb domain protein 87	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..50 e-value: 1.9E-5 score: 24.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..35 score: 9.917485
None	No IPR available	GENE3D	1.10.10.60		coord: 11..77 e-value: 4.0E-8 score: 35.1
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 1..45
None	No IPR available	PANTHER	PTHR48000:SF26	MYB DNA-BINDING DOMAIN SUPERFAMILY PROTEIN-RELATED	coord: 1..45
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..45 score: 6.748212
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..49 e-value: 4.78258E-6 score: 39.0958
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 9..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g10410.1	Cp4.1LG19g10410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding