Cp4.1LG19g09720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g09720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ethylene-responsive transcription factor ERF060-like
Location	Cp4.1LG19: 5882460 .. 5883470 (-)
RNA-Seq Expression	Cp4.1LG19g09720
Synteny	Cp4.1LG19g09720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCAGCTTTAGATTTTTGCACTGGAATTTCTGCGCCGGTTTACTCTTCGGATCCTTTTTGCGAAGAGTTAATGAAAGCACTTCAACCTTTTATGAAAAGTGCTGTTTCATCCTCTTCTTCTTCTTCTTCTTCTTCTGTTTCTTATCAGCCTAATGTGAACCCTGATTTTTGCTCCCCGTCGAGCATCCGCTTGTTTCCTCAAGCGTGTTCGGGAATTGAACAAATGGGTCTCGAGCAATCGGGTCCAATCGGGCTAAACAATCCCACCCCTTCACAAGTTCTCCAAATTCAAGCTCAAATCCAACTACCCTCACAAACTCTGTCTTCCTTCCCTTCTTCTTTTTCATTCCAGTCTCGAGTTTCGTCCCAATACCATAGCGTCCTTGCCCCCAAATCCATTCCGATGAAGTACACCGGCTCTCCGACTAAGCCCACTAGAATCTACAGGGGAATCCGGCAGCGCCACTGGGGAAAATGGGTCGCCGAAATTAGACTCCCCAAGAACCGAACCAGACTCTGGCTTGGCACTTTTGACACGGCCGAGGAGGCGGCTTTAGCCTATGACAAAGCTGCTTACAAACTCCGTGGCGACTTGGCTCGCCTCAATTTTCCACATCTCAAACACAAATTCGGGGACTTCGAGCCTCTTCACTCTTCTGTGGACGCGAAACTTCAAGCAATTTGTCAAAGCTTGAAACAGGGGGAAACAGAGAAGCCACCGAGCGCTCCACCTCCATCTGAATCAAACTCAGTGGTTAACAATTTTAAGGAAGCGGAATTGAAAATCGAAGCGGAGACTTCATCTTCATCTTCATCTTCATGGTCATCTCCTTCGCTGTGTGAAGATTTCTCCACCGGGTCCTCCCCTGAGTCGAGTATTAGCTTCTTGGATTTCTCAGATTCGCAATGGGGTGAAGGAGAAGCATTCTGTTTGGAAAAGTATCCTTCCGTTGAAATTGATTGGGCAGCTCTGAATCAGCTGGGCGAATCAGAGTGTTTAATTTAG

mRNA sequence

ATGGCAGCAGCTTTAGATTTTTGCACTGGAATTTCTGCGCCGGTTTACTCTTCGGATCCTTTTTGCGAAGAGTTAATGAAAGCACTTCAACCTTTTATGAAAAGTGCTGTTTCATCCTCTTCTTCTTCTTCTTCTTCTTCTGTTTCTTATCAGCCTAATGTGAACCCTGATTTTTGCTCCCCGTCGAGCATCCGCTTGTTTCCTCAAGCGTGTTCGGGAATTGAACAAATGGGTCTCGAGCAATCGGGTCCAATCGGGCTAAACAATCCCACCCCTTCACAAGGGGAAACAGAGAAGCCACCGAGCGCTCCACCTCCATCTGAATCAAACTCAGTGGTTAACAATTTTAAGGAAGCGGAATTGAAAATCGAAGCGGAGACTTCATCTTCATCTTCATCTTCATGGTCATCTCCTTCGCTGTGTGAAGATTTCTCCACCGGGTCCTCCCCTGAGTCGAGTATTAGCTTCTTGGATTTCTCAGATTCGCAATGGGGTGAAGGAGAAGCATTCTGTTTGGAAAAGTATCCTTCCGTTGAAATTGATTGGGCAGCTCTGAATCAGCTGGGCGAATCAGAGTGTTTAATTTAG

Coding sequence (CDS)

ATGGCAGCAGCTTTAGATTTTTGCACTGGAATTTCTGCGCCGGTTTACTCTTCGGATCCTTTTTGCGAAGAGTTAATGAAAGCACTTCAACCTTTTATGAAAAGTGCTGTTTCATCCTCTTCTTCTTCTTCTTCTTCTTCTGTTTCTTATCAGCCTAATGTGAACCCTGATTTTTGCTCCCCGTCGAGCATCCGCTTGTTTCCTCAAGCGTGTTCGGGAATTGAACAAATGGGTCTCGAGCAATCGGGTCCAATCGGGCTAAACAATCCCACCCCTTCACAAGGGGAAACAGAGAAGCCACCGAGCGCTCCACCTCCATCTGAATCAAACTCAGTGGTTAACAATTTTAAGGAAGCGGAATTGAAAATCGAAGCGGAGACTTCATCTTCATCTTCATCTTCATGGTCATCTCCTTCGCTGTGTGAAGATTTCTCCACCGGGTCCTCCCCTGAGTCGAGTATTAGCTTCTTGGATTTCTCAGATTCGCAATGGGGTGAAGGAGAAGCATTCTGTTTGGAAAAGTATCCTTCCGTTGAAATTGATTGGGCAGCTCTGAATCAGCTGGGCGAATCAGAGTGTTTAATTTAG

Protein sequence

MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCSPSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQGETEKPPSAPPPSESNSVVNNFKEAELKIEAETSSSSSSSWSSPSLCEDFSTGSSPESSISFLDFSDSQWGEGEAFCLEKYPSVEIDWAALNQLGESECLI

Homology

[Close]

BLAST of Cp4.1LG19g09720 vs. ExPASy Swiss-Prot
Match: O65665 (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana OX=3702 GN=ERF060 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 130 SSSSSWSSPSLCEDFSTGSSPESSI-SFLDFSDSQWGEGEAFCLEKYPSVEIDWAALNQL 189
           S  +S+S  S  E     SSPES I +FLDFSDS + E  +F LEK+PSVEIDW A+++L
Sbjct: 214 SDENSFSDESHVE----SSSPESGITTFLDFSDSGFDEIGSFGLEKFPSVEIDWDAISKL 272

Query: 190 GES 192
            ES
Sbjct: 274 SES 272

[Close]

BLAST of Cp4.1LG19g09720 vs. ExPASy Swiss-Prot
Match: Q9FJQ2 (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana OX=3702 GN=ERF057 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.9e-04
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0


Query: 146 TGSSPESSISFLDFSDSQWGEGEAFC--LEKYPSVEIDWAALNQL 189
           +GSSPES I+ LDFS     E E+F   L KYPS+EIDW A+ +L
Sbjct: 232 SGSSPESDITLLDFSSDCVKEDESFLMGLHKYPSLEIDWDAIEKL 276

[Close]

BLAST of Cp4.1LG19g09720 vs. NCBI nr
Match: XP_023517236.1 (ethylene-responsive transcription factor RAP2-13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320 bits (819), Expect = 7.84e-107
Identity = 195/336 (58.04%), Postives = 195/336 (58.04%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCS 60
           MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCS
Sbjct: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCS 60

Query: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ-------------------------- 120
           PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ                          
Sbjct: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQVLQIQAQIQLPSQTLSSFPSSFSFQS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RVSSQYHSVLAPKSIPMKYTGSPTKPTRIYRGIRQRHWGKWVAEIRLPKNRTRLWLGTFD 180

Query: 181 -------------------------------------------------------GETEK 195
                                                                  GETEK
Sbjct: 181 TAEEAALAYDKAAYKLRGDLARLNFPHLKHKFGDFEPLHSSVDAKLQAICQSLKQGETEK 240

[Close]

BLAST of Cp4.1LG19g09720 vs. NCBI nr
Match: KAG6594870.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312 bits (799), Expect = 1.01e-103
Identity = 192/336 (57.14%), Postives = 193/336 (57.44%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCS 60
           MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPN+NPDFCS
Sbjct: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNLNPDFCS 60

Query: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ-------------------------- 120
           PSSIRLFPQACSGIEQ GLEQSGPIGLNNPTPSQ                          
Sbjct: 61  PSSIRLFPQACSGIEQTGLEQSGPIGLNNPTPSQVLQIQAQIQLPSQTMSSFPSSFSFRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RVSSQYHSVLAPKSIPMKHTGSPTKPTRVYRGIRQRHWGKWVAEIRLPKNRTRLWLGTFD 180

Query: 181 -------------------------------------------------------GETEK 195
                                                                  GETEK
Sbjct: 181 TAEEAALAYDKAAYKLRGDLARLNFPHLKHQFGDFEPLHSSVDAKLQAICQSLKQGETEK 240

[Close]

BLAST of Cp4.1LG19g09720 vs. NCBI nr
Match: KAG7026835.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310 bits (793), Expect = 7.42e-103
Identity = 191/336 (56.85%), Postives = 192/336 (57.14%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCS 60
           MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVS+SSSSS   VSYQPNVNPDFCS
Sbjct: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSTSSSSS---VSYQPNVNPDFCS 60

Query: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ-------------------------- 120
           PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ                          
Sbjct: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQVLQIQAQIQLPSQTMSSFPSSFSFRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RVSSQYHSVLAPKSISMKHTGSPTKPTRVYRGIRQRHWGKWVAEIRLPKNRTRLWLGTFD 180

Query: 181 -------------------------------------------------------GETEK 195
                                                                  GETEK
Sbjct: 181 TAEEAALAYDKAAYKLRGDLARLNFPHLKHQFGDFEPLHSSVDAKLQAICQSLKQGETEK 240

[Close]

BLAST of Cp4.1LG19g09720 vs. NCBI nr
Match: XP_022963399.1 (ethylene-responsive transcription factor ERF060-like [Cucurbita moschata])

HSP 1 Score: 297 bits (760), Expect = 6.86e-98
Identity = 187/335 (55.82%), Postives = 189/335 (56.42%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCS 60
           MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVS+SSSSS   VSYQPNVNPDFCS
Sbjct: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSTSSSSS---VSYQPNVNPDFCS 60

Query: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ-------------------------- 120
           PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ                          
Sbjct: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQVLQIQAQIQLPSQTMSSFPSSFSFQS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RVSSQYHSVLAPKSIPMKHTGSPTKPTRVYRGIRQRHWGKWVAEIRLPKNRTRLWLGTFD 180

Query: 181 -------------------------------------------------------GETEK 192
                                                                  GETEK
Sbjct: 181 TAEEAALAYDKAAYKLRGDLARLNFPHLKHQFGDFEPLHSSVDAKLQAICQSLKQGETEK 240

[Close]

BLAST of Cp4.1LG19g09720 vs. NCBI nr
Match: XP_023004027.1 (ethylene-responsive transcription factor ERF060-like [Cucurbita maxima])

HSP 1 Score: 276 bits (707), Expect = 9.93e-90
Identity = 182/342 (53.22%), Postives = 186/342 (54.39%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCS 60
           MAAALDF TGISAPVYSSDPF EELMKAL+PFMKSAVSSSSSSS   VSYQPNVNPDF S
Sbjct: 1   MAAALDFYTGISAPVYSSDPFFEELMKALKPFMKSAVSSSSSSS---VSYQPNVNPDFRS 60

Query: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ-------------------------- 120
           PS+IRLFPQACSGIEQ+GLEQSGPIGLNNPTPSQ                          
Sbjct: 61  PSTIRLFPQACSGIEQVGLEQSGPIGLNNPTPSQVLQIQAQIQLPSQTMSSFPSSFSFQS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RVSSQYHSILAPKSIPMKHTGSPTKPTRVYRGIRQRHWGKWVAEIRLPKNRTRLWLGTFD 180

Query: 181 -------------------------------------------------------GETEK 195
                                                                  GETEK
Sbjct: 181 TAEEAALAYDKAAYKLRGDLARLNFPHLKHQFGDFEPLHSSVDAKLQAICQSLKQGETEK 240

[Close]

BLAST of Cp4.1LG19g09720 vs. ExPASy TrEMBL
Match: A0A6J1HK00 (ethylene-responsive transcription factor ERF060-like OS=Cucurbita moschata OX=3662 GN=LOC111463614 PE=4 SV=1)

HSP 1 Score: 297 bits (760), Expect = 3.32e-98
Identity = 187/335 (55.82%), Postives = 189/335 (56.42%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCS 60
           MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVS+SSSSS   VSYQPNVNPDFCS
Sbjct: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSTSSSSS---VSYQPNVNPDFCS 60

Query: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ-------------------------- 120
           PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ                          
Sbjct: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQVLQIQAQIQLPSQTMSSFPSSFSFQS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RVSSQYHSVLAPKSIPMKHTGSPTKPTRVYRGIRQRHWGKWVAEIRLPKNRTRLWLGTFD 180

Query: 181 -------------------------------------------------------GETEK 192
                                                                  GETEK
Sbjct: 181 TAEEAALAYDKAAYKLRGDLARLNFPHLKHQFGDFEPLHSSVDAKLQAICQSLKQGETEK 240

[Close]

BLAST of Cp4.1LG19g09720 vs. ExPASy TrEMBL
Match: A0A6J1KP93 (ethylene-responsive transcription factor ERF060-like OS=Cucurbita maxima OX=3661 GN=LOC111497459 PE=4 SV=1)

HSP 1 Score: 276 bits (707), Expect = 4.81e-90
Identity = 182/342 (53.22%), Postives = 186/342 (54.39%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSSVSYQPNVNPDFCS 60
           MAAALDF TGISAPVYSSDPF EELMKAL+PFMKSAVSSSSSSS   VSYQPNVNPDF S
Sbjct: 1   MAAALDFYTGISAPVYSSDPFFEELMKALKPFMKSAVSSSSSSS---VSYQPNVNPDFRS 60

Query: 61  PSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ-------------------------- 120
           PS+IRLFPQACSGIEQ+GLEQSGPIGLNNPTPSQ                          
Sbjct: 61  PSTIRLFPQACSGIEQVGLEQSGPIGLNNPTPSQVLQIQAQIQLPSQTMSSFPSSFSFQS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RVSSQYHSILAPKSIPMKHTGSPTKPTRVYRGIRQRHWGKWVAEIRLPKNRTRLWLGTFD 180

Query: 181 -------------------------------------------------------GETEK 195
                                                                  GETEK
Sbjct: 181 TAEEAALAYDKAAYKLRGDLARLNFPHLKHQFGDFEPLHSSVDAKLQAICQSLKQGETEK 240

[Close]

BLAST of Cp4.1LG19g09720 vs. ExPASy TrEMBL
Match: A0A5A7T4I4 (Ethylene-responsive transcription factor ERF060 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002710 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 3.11e-60
Identity = 153/351 (43.59%), Postives = 165/351 (47.01%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSS----------VSY 60
           MAAA+D  +G S PVY SDPF EELMKALQPFMKSA+S+SSSSSSSS          VS 
Sbjct: 1   MAAAIDVYSGTSTPVYYSDPFSEELMKALQPFMKSAISTSSSSSSSSYSPSPPPHPSVSS 60

Query: 61  QPNVNPDFCSPSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ---------------- 120
           QP + PDFCSPSS RLF Q  SGIEQMG EQSGPIGLNNPTPSQ                
Sbjct: 61  QPRLIPDFCSPSSTRLFSQGFSGIEQMGFEQSGPIGLNNPTPSQILQIQAQIQLPSPTMS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SFSSSSSSFQSQYHNFLTPKSFPMKHIGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTR 180

Query: 181 ------------------------------------------------------------ 193
                                                                       
Sbjct: 181 LWLGTFDTAEEAALAYDQAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQSICQSL 240

[Close]

BLAST of Cp4.1LG19g09720 vs. ExPASy TrEMBL
Match: A0A1S3B297 (ethylene-responsive transcription factor ERF060 OS=Cucumis melo OX=3656 GN=LOC103484983 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 3.11e-60
Identity = 153/351 (43.59%), Postives = 165/351 (47.01%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSSSSSSSSS----------VSY 60
           MAAA+D  +G S PVY SDPF EELMKALQPFMKSA+S+SSSSSSSS          VS 
Sbjct: 1   MAAAIDVYSGTSTPVYYSDPFSEELMKALQPFMKSAISTSSSSSSSSYSPSPPPHPSVSS 60

Query: 61  QPNVNPDFCSPSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ---------------- 120
           QP + PDFCSPSS RLF Q  SGIEQMG EQSGPIGLNNPTPSQ                
Sbjct: 61  QPRLIPDFCSPSSTRLFSQGFSGIEQMGFEQSGPIGLNNPTPSQILQIQAQIQLPSPTMS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SFSSSSSSFQSQYHNFLTPKSFPMKHIGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTR 180

Query: 181 ------------------------------------------------------------ 193
                                                                       
Sbjct: 181 LWLGTFDTAEEAALAYDQAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQSICQSL 240

[Close]

BLAST of Cp4.1LG19g09720 vs. ExPASy TrEMBL
Match: A0A6J1GDE5 (ethylene-responsive transcription factor ERF060-like OS=Cucurbita moschata OX=3662 GN=LOC111453173 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 7.07e-60
Identity = 151/341 (44.28%), Postives = 162/341 (47.51%), Query Frame = 0


Query: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSSS--SSSSSSSVSYQPNVNPDF 60
           MAAA+D  TGIS  VYSSDPF EELMKA QPFMKSAVS+S  SSSSSSSVS QP ++   
Sbjct: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAV 60

Query: 61  CSPSSIRLFPQACSGIEQMGLEQSGPIGLNNPTPSQ------------------------ 120
           CSPSS  LF Q  SGIEQMGLEQSGPIGLNN TPSQ                        
Sbjct: 61  CSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSSSS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT 180

Query: 181 ------------------------------------------------------GETEKP 193
                                                                 G+TEK 
Sbjct: 181 SEEAALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQGKTEKL 240

[Close]

BLAST of Cp4.1LG19g09720 vs. TAIR 10
Match: AT4G39780.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 8.3e-07
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 130 SSSSSWSSPSLCEDFSTGSSPESSI-SFLDFSDSQWGEGEAFCLEKYPSVEIDWAALNQL 189
           S  +S+S  S  E     SSPES I +FLDFSDS + E  +F LEK+PSVEIDW A+++L
Sbjct: 214 SDENSFSDESHVE----SSSPESGITTFLDFSDSGFDEIGSFGLEKFPSVEIDWDAISKL 272

Query: 190 GES 192
            ES
Sbjct: 274 SES 272

[Close]

BLAST of Cp4.1LG19g09720 vs. TAIR 10
Match: AT5G65130.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.0e-05
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0


Query: 146 TGSSPESSISFLDFSDSQWGEGEAFC--LEKYPSVEIDWAALNQL 189
           +GSSPES I+ LDFS     E E+F   L KYPS+EIDW A+ +L
Sbjct: 232 SGSSPESDITLLDFSSDCVKEDESFLMGLHKYPSLEIDWDAIEKL 276

[Close]

BLAST of Cp4.1LG19g09720 vs. TAIR 10
Match: AT2G22200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 6.5e-04
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 130 SSSSSWSSPSLCEDFSTGSSPESSISFLDFSDSQWGEGEAFCLEKYPSVEIDWAALNQLG 189
           S+ S  S  +   D S      S  +FLDFSD+++ E  +F L K+PSVEIDW A+++L 
Sbjct: 200 SNESPRSDETSLLDESQAEYSSSDKTFLDFSDTEFEEIGSFGLRKFPSVEIDWDAISKLA 259

Query: 190 ES 192
            S
Sbjct: 260 NS 261

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g09720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65665	1.2e-05	53.97	Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FJQ2	2.9e-04	55.56	Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cp4.1LG19g09720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517236.1	7.84e-107	58.04	ethylene-responsive transcription factor RAP2-13-like [Cucurbita pepo subsp. pep...	[more]
KAG6594870.1	1.01e-103	57.14	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG7026835.1	7.42e-103	56.85	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022963399.1	6.86e-98	55.82	ethylene-responsive transcription factor ERF060-like [Cucurbita moschata]	[more]
XP_023004027.1	9.93e-90	53.22	ethylene-responsive transcription factor ERF060-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG19g09720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HK00	3.32e-98	55.82	ethylene-responsive transcription factor ERF060-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KP93	4.81e-90	53.22	ethylene-responsive transcription factor ERF060-like OS=Cucurbita maxima OX=3661...	[more]
A0A5A7T4I4	3.11e-60	43.59	Ethylene-responsive transcription factor ERF060 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B297	3.11e-60	43.59	ethylene-responsive transcription factor ERF060 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GDE5	7.07e-60	44.28	ethylene-responsive transcription factor ERF060-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Cp4.1LG19g09720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39780.1	8.3e-07	53.97	Integrase-type DNA-binding superfamily protein	[more]
AT5G65130.1	2.0e-05	55.56	Integrase-type DNA-binding superfamily protein	[more]
AT2G22200.1	6.5e-04	41.94	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..156
None	No IPR available	PANTHER	PTHR31657	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061	coord: 1..94
None	No IPR available	PANTHER	PTHR31657:SF45	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE	coord: 118..187
None	No IPR available	PANTHER	PTHR31657:SF45	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE	coord: 1..94
None	No IPR available	PANTHER	PTHR31657	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061	coord: 118..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g09720.1	Cp4.1LG19g09720.1	mRNA