Cp4.1LG19g09300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g09300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	replication factor C subunit 5-like
Location	Cp4.1LG19: 6100226 .. 6104027 (+)
RNA-Seq Expression	Cp4.1LG19g09300
Synteny	Cp4.1LG19g09300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAGACTAAGCATCGTAGCGGCACACTCTTCGGAACATGCAGTGTTTGGACTGGAGCAGCAGAAGCGAAGAACACCCAATGAACGCCTGAAGTGAAAGAAAATTTCAGAGTTATCCCGCGTTCATCAGCGATGGCCGCCATTATTTCCGTTCACAATTCTTTCATCAATACTCAAAACTCTTTGCCATATTTCACATTCTACAGTCGCGGCCACCATGGCCAAGGAGAATAAAGACAATCTCTGGAGAGGATCGGCAAAGACAAGGCCTAATTACTTATTTTCTCAAAAACCAGCTTAGATATTTCAGGTAAACCACTCCAGATTTGAGAGCTGTATGTAATCACGCACCAGTTTCCCTATTTTGTTTTATTCGGTTCAAAGAATTATTGTCATCGTCGCCATCGATGAAATCTCCCTCGTGTTCATCAATTTCTTGGAATTTAGCATCCATCCAAATTTCTTTTGAAGGAATCGTATTAGTTCCTCTAATCTTTTTCTTAATATTTTATCGTTTATCGCATTGACGATCCAGCGGCAAGGGATTCTTATATTTCCCAATAGTTCTGAAACCTTTCCCCTCAACTGATTGTTCGATGAAGACCGTCGCTCTGAATTAGGGCTTCGGAACGATCATCGCAACTCGACAGAGTCCAATGTGTCCAGCTCTGAATCTAATGAAGCAGAGGAAGGATGGATATGAACCGTCTGATACGGAGACAGAATGGCAAGAGAGCCCTTGGAATGACCCTAAGGCGAAGAAACTTGTGCTGGATTACAATAACCGACGAGCAGATTCGGCAGCATCGAAGAAGTTCAGTACTGCAGCGAATATTTCTCCTCCTGGTTCGAGAAGAAACAATGGCAAAACGCCTCACAGGCCGGCCAAAGACGACAGTGTTCTAGTTATGCATCAGAGAAACATCAGCCCCTTGTCGAGAGCAGAAAGAAGAAGACACAAATCTCCTTTTAAAGCTGGAGCAGAGGAAATTGGAAGCTCTAGCATGAGGTCAAGAAAAGAGGAGAAGTTGACTTATTCTCATGGGGGTAACAGAATAAGTCAAAAGCCAAACCACAGTAGAAGATCAGTGACTGCTCCAAGGTTGAGAACGAGAGATGAACATATGAGTGCTGTTAACGATTTATCTCAAAGGAGAGACAGAGCTGCTCCATCCTTGCAGGTCAACTCCATCCTGCACCAGTCAAAGGAGGTTTCTCAAGTGAACTCTCTTTCTGTTGGTGAAATGAACGAGATGATTGCAGATGGAAGGGTCCATAGAGGTTCGATTTTTAATGAACCGATGGTTGAAAGCACGGGGTCGATCTCGCCGGGGGACATATTCTTTTCGCGTGATGGCTTGGCTATTGGAATGAATAACAATGTCACAGGGAAGAGAAATGCGTTCAAGAATTATATAAGTCCAAGGCCTAACTTTGTGTCCAAAAAGAATGATGATACTTATAATCAAGTTGAAGTAAATGCTAATGGTAGAGGAGTTACTTCTGCTGGAACAGGTTTGTCAACGACCACAACCAATAGTGCTGCTGTAAGTAGAGAAAATAGTAGTAGAATTAGCACTGAAAGTAGTAAGATCAGTGATGTGAGTGGAAGAACAAGTGAAAGTACAAGAAGGTTTATAGCCAGTAGACGAAAGAAGAAGAACGAGATGTGGTTTTCTTGTATGAGGAATGGGCCCTGCAGGACGACGAAATCGCCCGAAAAGCGGGAGTTTGATGAAGCTACATTCATTGAAAGAGCAAATGTTGTTGAATACTTGAAACCCTTTTGGGCAGATAAGCATCGACCGGTGTCCTTAAGTGGATTCGCTTTCCATAAGCCTGAGGCGCAAACTCTCAAGCAATTAGTAAGTGTTTTCAGGTACTCTTGCATTACTTGTGCAGTTTATTGCATAGTCTTGTTGATATCCATTTCATTGAATTATTAGGTTTTACAAGACAGTTTTCCCCACATCCTGTTCAAGGGTCCGCGCGGATCTGGCAAACGAGTGCTCATTATGGCTCTTCTGCGCGAGATATATGGCGATTCGTGTTGGAATGTATGTCTTTGAGCAACTGATGCAGTAACATTAAAATTCTTCTTTCTTTGGTATGAGCTTGCTTGAATTGGTTGCCTTGTTGTGTATCGTTTCAGGTTTCTCATGATTTGCGACGTTTCCAGATTCAGGTAACTGCAAATATATGGTAAAATATTAGAAATGTTCTTTCTTGTACTAATATGAGCAGAGAGTTTAAACACATAACAAGTCTTGGAGCTCATCCTGATATCATAACAGGAAAGAAAACTAACGCAAGTCTTTGTTCCATTGACGTCAAGTGCTCACCATGTGGAACTAAATTTAAGCTCAGAAGCAAATGCTAAGTATGCTCTACTGGGATTGGCTAAAGAAATAGGCAGTGAATATTCCATTAATGTGGAAGCAAGAAATCTTAATCCGAAGGCTAGTTTCAAAGGTCCGATTTCGAAAAGATTTCTATGGTAAAAAAAAAAAACTTATAAACCTTACGCTAATCTGATTTTGTGCTCTTAATTCCAGTGGTAATCCTTTTAGATGTAGACAAAGCTGTAGAGGATATTCAACATTTGCTTAGGTGGATTATGGATGGCTATAAGGATGCCTGCAAAGTAGTACTCTGTTGTGACAACGACACAGGCATCCTTGACTCAGTGATAAGCCGCTGCAAAGTTATCAAAATTAACCCTCCAGTAACTCATGAAGTAAACACTATCTTGTTTATGTTTTTTCGATACGACTTTTATACCGAGACCGCTATTTGGGTATTATCATGCTAAACTTTTTTGTTTTTCGGTTAATCTCCAACTTCCCAGATCATAGATGTACTTATCCAAATAGCAAAGAAGGAGGAATTTGACCTGCCTATGAACTTTGCTTCTAAGATTGCTGCTAAAGCAAAGCAGAACCTGAGAAAAGCAATCATGGCGCTTGAAGCATGCAAGGCACACAAGTTAAGACATTAGCATTTAGATACTCAAATTTACTTTTACATAATCCACAAGAGCTAAAAAGTTTTCCCTTTTGCAGTTATCCATTTTCTGATGACCAGCCAATCCCCATTGGATGGGAAGAGGCCGTGGTAGAACTCGCAGCTCATATCCTCGAAGACCCGACGAATCCAAGGTAAAACTCCATGTTTCCTATTATATGTCTGGTCAAGATAGATGAAACAAGCACAATATTCTAAGAGAACAATTTCGAGCAGAGTTTCGAGATTCTTATCGACTATACTCCTGATTTGAGTATCGTCATTTCTTTTATGTTCTTATCAGATTACACCTAGTAAAAGAAAAAATTCAGAAGCTTCTAGTTGATTCTGTTCATCCAAAACTAATCCTCCAGGTACGGCATTTAAAGTTAGGACACTATTAGTTCATGAAAAAGACTCATAAAGTTGTGTCCTCCATGTGCAGAAGCTCGTGGAAGAATTTCTGAAAAGAATTGAGCTGAGGTCAAGGAGGGAACTTTACTACTGGCATGCTTATTATGTTAGTTCTCTTTTTCCCGTTTTCTTTTCCAATTCAAGGCATTGTTAGGCAAGTTTGGTAACTGGGAGCTTTATCATTTGCAGAACAAGAGACTCCCAACTGAAACTGGAACAGGCGCCTTACCCAAATTGGAAGGTACAAAACAAATTGTTGTCCAACTTACTTACTTACATACATAATCTCACAAAAATCATACGAATTTCTTCTTTTGCAGAATTCGTGGCGAAGTTCATGAGCATGTACAGGAAGAGCTCCACCAACCTCGTTTATGATCGATAA

mRNA sequence

GGAAAGACTAAGCATCGTAGCGGCACACTCTTCGGAACATGCAGTGTTTGGACTGGAGCAGCAGAAGCGAAGAACACCCAATGAACGCCTGAAGTGAAAGAAAATTTCAGAGTTATCCCGCGTTCATCAGCGATGGCCGCCATTATTTCCGTTCACAATTCTTTCATCAATACTCAAAACTCTTTGCCATATTTCACATTCTACAGTCGCGGCCACCATGGCCAAGGAGAATAAAGACAATCTCTGGAGAGGATCGGCAAAGACAAGGCCTAATTACTTATTTTCTCAAAAACCAGCTTAGATATTTCAGGTAAACCACTCCAGATTTGAGAGCTGTATGTAATCACGCACCAGTTTCCCTATTTTGTTTTATTCGGTTCAAAGAATTATTGTCATCGTCGCCATCGATGAAATCTCCCTCGTGTTCATCAATTTCTTGGAATTTAGCATCCATCCAAATTTCTTTTGAAGGAATCGTATTAGTTCCTCTAATCTTTTTCTTAATATTTTATCGTTTATCGCATTGACGATCCAGCGGCAAGGGATTCTTATATTTCCCAATAGTTCTGAAACCTTTCCCCTCAACTGATTGTTCGATGAAGACCGTCGCTCTGAATTAGGGCTTCGGAACGATCATCGCAACTCGACAGAGTCCAATGTGTCCAGCTCTGAATCTAATGAAGCAGAGGAAGGATGGATATGAACCGTCTGATACGGAGACAGAATGGCAAGAGAGCCCTTGGAATGACCCTAAGGCGAAGAAACTTGTGCTGGATTACAATAACCGACGAGCAGATTCGGCAGCATCGAAGAAGTTCAGTACTGCAGCGAATATTTCTCCTCCTGGTTCGAGAAGAAACAATGGCAAAACGCCTCACAGGCCGGCCAAAGACGACAGTGTTCTAGTTATGCATCAGAGAAACATCAGCCCCTTGTCGAGAGCAGAAAGAAGAAGACACAAATCTCCTTTTAAAGCTGGAGCAGAGGAAATTGGAAGCTCTAGCATGAGGTCAAGAAAAGAGGAGAAGTTGACTTATTCTCATGGGGGTAACAGAATAAGTCAAAAGCCAAACCACAGTAGAAGATCAGTGACTGCTCCAAGGTTGAGAACGAGAGATGAACATATGAGTGCTGTTAACGATTTATCTCAAAGGAGAGACAGAGCTGCTCCATCCTTGCAGGTCAACTCCATCCTGCACCAGTCAAAGGAGGTTTCTCAAGTGAACTCTCTTTCTGTTGGTGAAATGAACGAGATGATTGCAGATGGAAGGGTCCATAGAGGTTCGATTTTTAATGAACCGATGGTTGAAAGCACGGGGTCGATCTCGCCGGGGGACATATTCTTTTCGCGTGATGGCTTGGCTATTGGAATGAATAACAATGTCACAGGGAAGAGAAATGCGTTCAAGAATTATATAAGTCCAAGGCCTAACTTTGTGTCCAAAAAGAATGATGATACTTATAATCAAGTTGAAGTAAATGCTAATGGTAGAGGAGTTACTTCTGCTGGAACAGGTTTGTCAACGACCACAACCAATAGTGCTGCTGTAAGTAGAGAAAATAGTAGTAGAATTAGCACTGAAAGTAGTAAGATCAGTGATGTGAGTGGAAGAACAAGTGAAAGTACAAGAAGGTTTATAGCCAGTAGACGAAAGAAGAAGAACGAGATGTGGTTTTCTTGTATGAGGAATGGGCCCTGCAGGACGACGAAATCGCCCGAAAAGCGGGAGTTTGATGAAGCTACATTCATTGAAAGAGCAAATGTTGTTGAATACTTGAAACCCTTTTGGGCAGATAAGCATCGACCGGTGTCCTTAAGTGGATTCGCTTTCCATAAGCCTGAGGCGCAAACTCTCAAGCAATTAGTTTTACAAGACAGTTTTCCCCACATCCTGTTCAAGGGTCCGCGCGGATCTGGCAAACGAGTGCTCATTATGGCTCTTCTGCGCGAGATATATGGCGATTCGTGTTGGAATGTTTCTCATGATTTGCGACGTTTCCAGATTCAGGAAAGAAAACTAACGCAAGTCTTTGTTCCATTGACGTCAAGTGCTCACCATGTGGAACTAAATTTAAGCTCAGAAGCAAATGCTAAGTATGCTCTACTGGGATTGGCTAAAGAAATAGGCAGTGAATATTCCATTAATGTGGAAGCAAGAAATCTTAATCCGAAGGCTAGTTTCAAAGTGGTAATCCTTTTAGATGTAGACAAAGCTGTAGAGGATATTCAACATTTGCTTAGGTGGATTATGGATGGCTATAAGGATGCCTGCAAAGTAGTACTCTGTTGTGACAACGACACAGGCATCCTTGACTCAGTGATAAGCCGCTGCAAAGTTATCAAAATTAACCCTCCAGTAACTCATGAAATCATAGATGTACTTATCCAAATAGCAAAGAAGGAGGAATTTGACCTGCCTATGAACTTTGCTTCTAAGATTGCTGCTAAAGCAAAGCAGAACCTGAGAAAAGCAATCATGGCGCTTGAAGCATGCAAGGCACACAATTATCCATTTTCTGATGACCAGCCAATCCCCATTGGATGGGAAGAGGCCGTGGTAGAACTCGCAGCTCATATCCTCGAAGACCCGACGAATCCAAGATTACACCTAGTAAAAGAAAAAATTCAGAAGCTTCTAGTTGATTCTGTTCATCCAAAACTAATCCTCCAGAAGCTCGTGGAAGAATTTCTGAAAAGAATTGAGCTGAGGTCAAGGAGGGAACTTTACTACTGGCATGCTTATTATAACAAGAGACTCCCAACTGAAACTGGAACAGGCGCCTTACCCAAATTGGAAGAATTCGTGGCGAAGTTCATGAGCATGTACAGGAAGAGCTCCACCAACCTCGTTTATGATCGATAA

Coding sequence (CDS)

ATGTGTCCAGCTCTGAATCTAATGAAGCAGAGGAAGGATGGATATGAACCGTCTGATACGGAGACAGAATGGCAAGAGAGCCCTTGGAATGACCCTAAGGCGAAGAAACTTGTGCTGGATTACAATAACCGACGAGCAGATTCGGCAGCATCGAAGAAGTTCAGTACTGCAGCGAATATTTCTCCTCCTGGTTCGAGAAGAAACAATGGCAAAACGCCTCACAGGCCGGCCAAAGACGACAGTGTTCTAGTTATGCATCAGAGAAACATCAGCCCCTTGTCGAGAGCAGAAAGAAGAAGACACAAATCTCCTTTTAAAGCTGGAGCAGAGGAAATTGGAAGCTCTAGCATGAGGTCAAGAAAAGAGGAGAAGTTGACTTATTCTCATGGGGGTAACAGAATAAGTCAAAAGCCAAACCACAGTAGAAGATCAGTGACTGCTCCAAGGTTGAGAACGAGAGATGAACATATGAGTGCTGTTAACGATTTATCTCAAAGGAGAGACAGAGCTGCTCCATCCTTGCAGGTCAACTCCATCCTGCACCAGTCAAAGGAGGTTTCTCAAGTGAACTCTCTTTCTGTTGGTGAAATGAACGAGATGATTGCAGATGGAAGGGTCCATAGAGGTTCGATTTTTAATGAACCGATGGTTGAAAGCACGGGGTCGATCTCGCCGGGGGACATATTCTTTTCGCGTGATGGCTTGGCTATTGGAATGAATAACAATGTCACAGGGAAGAGAAATGCGTTCAAGAATTATATAAGTCCAAGGCCTAACTTTGTGTCCAAAAAGAATGATGATACTTATAATCAAGTTGAAGTAAATGCTAATGGTAGAGGAGTTACTTCTGCTGGAACAGGTTTGTCAACGACCACAACCAATAGTGCTGCTGTAAGTAGAGAAAATAGTAGTAGAATTAGCACTGAAAGTAGTAAGATCAGTGATGTGAGTGGAAGAACAAGTGAAAGTACAAGAAGGTTTATAGCCAGTAGACGAAAGAAGAAGAACGAGATGTGGTTTTCTTGTATGAGGAATGGGCCCTGCAGGACGACGAAATCGCCCGAAAAGCGGGAGTTTGATGAAGCTACATTCATTGAAAGAGCAAATGTTGTTGAATACTTGAAACCCTTTTGGGCAGATAAGCATCGACCGGTGTCCTTAAGTGGATTCGCTTTCCATAAGCCTGAGGCGCAAACTCTCAAGCAATTAGTTTTACAAGACAGTTTTCCCCACATCCTGTTCAAGGGTCCGCGCGGATCTGGCAAACGAGTGCTCATTATGGCTCTTCTGCGCGAGATATATGGCGATTCGTGTTGGAATGTTTCTCATGATTTGCGACGTTTCCAGATTCAGGAAAGAAAACTAACGCAAGTCTTTGTTCCATTGACGTCAAGTGCTCACCATGTGGAACTAAATTTAAGCTCAGAAGCAAATGCTAAGTATGCTCTACTGGGATTGGCTAAAGAAATAGGCAGTGAATATTCCATTAATGTGGAAGCAAGAAATCTTAATCCGAAGGCTAGTTTCAAAGTGGTAATCCTTTTAGATGTAGACAAAGCTGTAGAGGATATTCAACATTTGCTTAGGTGGATTATGGATGGCTATAAGGATGCCTGCAAAGTAGTACTCTGTTGTGACAACGACACAGGCATCCTTGACTCAGTGATAAGCCGCTGCAAAGTTATCAAAATTAACCCTCCAGTAACTCATGAAATCATAGATGTACTTATCCAAATAGCAAAGAAGGAGGAATTTGACCTGCCTATGAACTTTGCTTCTAAGATTGCTGCTAAAGCAAAGCAGAACCTGAGAAAAGCAATCATGGCGCTTGAAGCATGCAAGGCACACAATTATCCATTTTCTGATGACCAGCCAATCCCCATTGGATGGGAAGAGGCCGTGGTAGAACTCGCAGCTCATATCCTCGAAGACCCGACGAATCCAAGATTACACCTAGTAAAAGAAAAAATTCAGAAGCTTCTAGTTGATTCTGTTCATCCAAAACTAATCCTCCAGAAGCTCGTGGAAGAATTTCTGAAAAGAATTGAGCTGAGGTCAAGGAGGGAACTTTACTACTGGCATGCTTATTATAACAAGAGACTCCCAACTGAAACTGGAACAGGCGCCTTACCCAAATTGGAAGAATTCGTGGCGAAGTTCATGAGCATGTACAGGAAGAGCTCCACCAACCTCGTTTATGATCGATAA

Protein sequence

MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANISPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSRKEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSILHQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMNNNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSRENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFDEATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRKSSTNLVYDR

Homology

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy Swiss-Prot
Match: Q8VXX4 (Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.5e-66
Identity = 136/351 (38.75%), Postives = 218/351 (62.11%), Query Frame = 0


Query: 378 WADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIMALLREIYGDS 437
           W DK+RP SL     H+  AQ LK+LV +   PH+LF GP GSGK+ LIMALL++IYG S
Sbjct: 3   WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGAS 62

Query: 438 CWNVSHDLRRFQIQERKLT-QVFVPLTSSAHHVELNLSSEA-NAKYALLGLAKEIGSEYS 497
              V  + R +++     T  + +   SS +HVEL  S      +Y +  + KE+     
Sbjct: 63  AEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRP 122

Query: 498 INVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDNDTGILDSV 557
           I+ +      K  +KV++L +VDK   + QH LR  M+ Y  +C+++LCC++ + + +++
Sbjct: 123 IDTKG-----KKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAI 182

Query: 558 ISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAIMALEACKA 617
            SRC  ++IN P   EI+ VL  +AKKE   LP  FA++IA K+ ++LR+AI++LE C+ 
Sbjct: 183 KSRCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRV 242

Query: 618 HNYPFSDDQPI-PIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHPKLILQKL 677
            NYPF+ +Q I P+ WEE V E+A  ++++ +  +L  V+ K+ +LLV+ + P++IL++L
Sbjct: 243 QNYPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRL 302

Query: 678 VEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYR 726
           + E LK+++   + E+ +W AYY  R+    G  A+  +E FVAKFMS+Y+
Sbjct: 303 LHELLKKLDSELKLEVCHWAAYYEHRM--RLGQKAIFHIEAFVAKFMSIYK 346

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy Swiss-Prot
Match: Q852K3 (Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.6e-66
Identity = 132/352 (37.50%), Postives = 219/352 (62.22%), Query Frame = 0


Query: 378 WADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIMALLREIYGDS 437
           W DK+RP +L     H   AQ LK+LV +   PH+LF GP GSGK+ L+MAL+++++G  
Sbjct: 3   WVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLVMALIKQMFGAG 62

Query: 438 CWNVSHDLRRFQIQE-RKLTQVFVPLTSSAHHVELNLSSEA-NAKYALLGLAKEIGSEYS 497
              V  + + ++I    +  ++ + + SSAHHVE+N S      +Y +  + KE+     
Sbjct: 63  ADKVKMENKTWKIDTGSRNIEIELAMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKNRP 122

Query: 498 INVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDNDTGILDSV 557
           I+ +      K +FKV++L +VDK   + QH LR  M+ Y  +C+++LCC++ + + ++V
Sbjct: 123 IDAKG-----KRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAV 182

Query: 558 ISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAIMALEACKA 617
            SRC  +++N P   +I+ VL  I KKE   LP  FA++IAA++ +NLR+AI+  E CK 
Sbjct: 183 RSRCLNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKV 242

Query: 618 HNYPFSDDQPI-PIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHPKLILQKL 677
             YPF+ +Q   P+ WE+ V E+AA I+++ +  RL  V++K  +LLV+ + P+ IL+KL
Sbjct: 243 QQYPFTSNQVAPPLDWEQYVSEIAADIMKEQSPKRLFAVRQKFYELLVNCIPPESILKKL 302

Query: 678 VEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRK 727
           + E LK+++   + E+ +W A+Y  ++    G+ A+  LE FVAKFMS+Y++
Sbjct: 303 LAELLKKLDSDLKHEICHWAAHYEHKM--RLGSKAIFHLEAFVAKFMSIYKE 347

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy Swiss-Prot
Match: P40938 (Replication factor C subunit 3 OS=Homo sapiens OX=9606 GN=RFC3 PE=1 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 1.2e-55
Identity = 121/351 (34.47%), Postives = 197/351 (56.13%), Query Frame = 0


Query: 378 WADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIMALLREIYGDS 437
           W DK+RP SL    +HK +A  L+ LV    FPH+L  GP G+GK+  IM +LRE+YG  
Sbjct: 4   WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63

Query: 438 CWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANA-KYALLGLAKEIGSEYSI 497
              +  + +      +K  ++ +   +S +H+E+N S   N+ +  +  + K +     +
Sbjct: 64  VEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQL 123

Query: 498 NVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDNDTGILDSVI 557
                  N +  FKVV+L +VDK  +D QH LR  M+ Y   C+++LCC++ + ++  + 
Sbjct: 124 ET-----NSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIR 183

Query: 558 SRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAIMALEACKAH 617
           SRC  +++  P   +I  VL  + KKE  +LP   A ++A K+ +NLRKA++  EAC+  
Sbjct: 184 SRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQ 243

Query: 618 NYPFSDDQPIP-IGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHPKLILQKLV 677
            YPF+ DQ IP   WE  + E A  I+   T  RL  V+ ++ +LL   + P++I++ L+
Sbjct: 244 QYPFTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLL 303

Query: 678 EEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRK 727
            E L   + + + E+    AYY  RL  + G+ A+  LE FVAKFM++Y+K
Sbjct: 304 SELLHNCDGQLKGEVAQMAAYYEHRL--QLGSKAIYHLEAFVAKFMALYKK 345

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy Swiss-Prot
Match: Q2TBV1 (Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.5e-55
Identity = 120/351 (34.19%), Postives = 197/351 (56.13%), Query Frame = 0


Query: 378 WADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIMALLREIYGDS 437
           W DK+RP SL    +HK +A  L+ LV    FPH+L  GP G+GK+  IM +LRE+YG  
Sbjct: 4   WVDKYRPCSLGQLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63

Query: 438 CWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANA-KYALLGLAKEIGSEYSI 497
              +  + +      +K  ++ +   +S +H+E+N S   N+ +  +  + K +     +
Sbjct: 64  VEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQL 123

Query: 498 NVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDNDTGILDSVI 557
              ++       FKVV+L +VDK  +D QH LR  M+ Y   C+++LCC++ + ++  + 
Sbjct: 124 ETSSQK-----DFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIR 183

Query: 558 SRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAIMALEACKAH 617
           SRC  +++  P   +I  VL  + KKE  +LP   A ++A K+ +NLRKA++  EAC+  
Sbjct: 184 SRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQ 243

Query: 618 NYPFSDDQPIP-IGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHPKLILQKLV 677
            YPF+ DQ IP   WE  + E A  I+   T  RL  V+ ++ +LL   + P++I++ L+
Sbjct: 244 QYPFTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLL 303

Query: 678 EEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRK 727
            E L   + + + E+    AYY  RL  + G+ A+  LE FVAKFM++Y+K
Sbjct: 304 SELLHNCDGQLKGEVAQMAAYYEHRL--QLGSKAIYHLEAFVAKFMALYKK 345

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy Swiss-Prot
Match: Q8R323 (Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.5e-55
Identity = 119/351 (33.90%), Postives = 198/351 (56.41%), Query Frame = 0


Query: 378 WADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIMALLREIYGDS 437
           W DK+RP SL+   +HK +A  L+ LV    FPH+L  GP G+GK+  IM +LRE+YG  
Sbjct: 4   WVDKYRPSSLARLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGIG 63

Query: 438 CWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANA-KYALLGLAKEIGSEYSI 497
              +  + +      +K  ++ +   +S +H+E+N S   N+ +  +  + K +     +
Sbjct: 64  VEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQL 123

Query: 498 NVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDNDTGILDSVI 557
              ++       FKVV+L +VDK  +D QH LR  M+ Y   C+++LCC++ + ++  + 
Sbjct: 124 ETSSQR-----DFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIR 183

Query: 558 SRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAIMALEACKAH 617
           SRC  +++  P   +I  VL  + +KE   LP   A ++A K+ +NLRKA++  EAC+  
Sbjct: 184 SRCLAVRVPAPSIEDICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQ 243

Query: 618 NYPFSDDQPIP-IGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHPKLILQKLV 677
            YPF++DQ IP   WE  + E A  I+   T  RL  V+ ++ +LL   + P++I++ L+
Sbjct: 244 QYPFTEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLL 303

Query: 678 EEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRK 727
            E L   + + + E+    AYY  RL  + G+ A+  LE FVAKFM++Y+K
Sbjct: 304 SELLHNCDGQLKGEVAQMAAYYEHRL--QLGSKAIYHLEAFVAKFMALYKK 345

[Close]

BLAST of Cp4.1LG19g09300 vs. NCBI nr
Match: XP_023517446.1 (uncharacterized protein LOC111781207 [Cucurbita pepo subsp. pepo] >XP_023517447.1 uncharacterized protein LOC111781207 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1433 bits (3709), Expect = 0.0
Identity = 735/735 (100.00%), Postives = 735/735 (100.00%), Query Frame = 0


Query: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60
           MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI
Sbjct: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60

Query: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120
           SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR
Sbjct: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120

Query: 121 KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180
           KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL
Sbjct: 121 KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180

Query: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN 240
           HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN
Sbjct: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN 240

Query: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300
           NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR
Sbjct: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300

Query: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360
           ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD
Sbjct: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360

Query: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420
           EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS
Sbjct: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420

Query: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480
           GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK
Sbjct: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480

Query: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540
           YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK
Sbjct: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540

Query: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAK 600
           VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAK
Sbjct: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAK 600

Query: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660
           QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL
Sbjct: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660

Query: 661 LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720
           LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF
Sbjct: 661 LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720

Query: 721 MSMYRKSSTNLVYDR 735
           MSMYRKSSTNLVYDR
Sbjct: 721 MSMYRKSSTNLVYDR 735

[Close]

BLAST of Cp4.1LG19g09300 vs. NCBI nr
Match: KAG6594820.1 (Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1424 bits (3686), Expect = 0.0
Identity = 729/735 (99.18%), Postives = 732/735 (99.59%), Query Frame = 0


Query: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60
           MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI
Sbjct: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60

Query: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120
           SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR
Sbjct: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120

Query: 121 KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180
           KEEKLTYSHG NRISQKPNH+RRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL
Sbjct: 121 KEEKLTYSHGSNRISQKPNHNRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180

Query: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN 240
           HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDG+AIGMN
Sbjct: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGMAIGMN 240

Query: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300
           NNVTGKRNAFKNYISPRPNFVSKKNDDTYN+VEVNANGRGVTSAG GLSTTTTNSAAVSR
Sbjct: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNEVEVNANGRGVTSAGAGLSTTTTNSAAVSR 300

Query: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360
           ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD
Sbjct: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360

Query: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420
           EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS
Sbjct: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420

Query: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480
           GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK
Sbjct: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480

Query: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540
           YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK
Sbjct: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540

Query: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAK 600
           VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIA KAK
Sbjct: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIATKAK 600

Query: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660
           QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL
Sbjct: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660

Query: 661 LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720
           LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF
Sbjct: 661 LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720

Query: 721 MSMYRKSSTNLVYDR 735
           MSMYRKSSTNLVYDR
Sbjct: 721 MSMYRKSSTNLVYDR 735

[Close]

BLAST of Cp4.1LG19g09300 vs. NCBI nr
Match: XP_022963157.1 (uncharacterized protein LOC111463451 [Cucurbita moschata] >XP_022963158.1 uncharacterized protein LOC111463451 [Cucurbita moschata])

HSP 1 Score: 1423 bits (3683), Expect = 0.0
Identity = 728/735 (99.05%), Postives = 732/735 (99.59%), Query Frame = 0


Query: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60
           MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI
Sbjct: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60

Query: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120
           SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR
Sbjct: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120

Query: 121 KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180
           KEEKLTYSHG NRISQKPNH+RRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL
Sbjct: 121 KEEKLTYSHGSNRISQKPNHNRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180

Query: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN 240
           HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDG+AIGMN
Sbjct: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGMAIGMN 240

Query: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300
           NN TGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR
Sbjct: 241 NNATGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300

Query: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360
           ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD
Sbjct: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360

Query: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420
           EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS
Sbjct: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420

Query: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480
           GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK
Sbjct: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480

Query: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540
           YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK
Sbjct: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540

Query: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAK 600
           VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFD+PMNFASKIA KAK
Sbjct: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDVPMNFASKIATKAK 600

Query: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660
           QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL
Sbjct: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660

Query: 661 LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720
           LV+SVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF
Sbjct: 661 LVESVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720

Query: 721 MSMYRKSSTNLVYDR 735
           MSMYRKSSTNLVYDR
Sbjct: 721 MSMYRKSSTNLVYDR 735

[Close]

BLAST of Cp4.1LG19g09300 vs. NCBI nr
Match: KAG7026786.1 (Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1401 bits (3626), Expect = 0.0
Identity = 719/740 (97.16%), Postives = 725/740 (97.97%), Query Frame = 0


Query: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60
           MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI
Sbjct: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60

Query: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120
           SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR
Sbjct: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120

Query: 121 KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180
           KEEKLTYSHG NRISQKPNH+RRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL
Sbjct: 121 KEEKLTYSHGSNRISQKPNHNRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180

Query: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN 240
           HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDG+AIGMN
Sbjct: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGMAIGMN 240

Query: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300
           NNVTGKRNAFKNYISPRPNFVSKKNDDTYN+VEVNANGRGVTSAG GLSTTTTNSAAVSR
Sbjct: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNEVEVNANGRGVTSAGAGLSTTTTNSAAVSR 300

Query: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360
           ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD
Sbjct: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360

Query: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420
           EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS
Sbjct: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420

Query: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480
           GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK
Sbjct: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480

Query: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540
           YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK
Sbjct: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540

Query: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAK-----KEEFDLPMNFASKI 600
           VVLCCDNDTGILDSVISRCKVIKINPPVTHE+  +L    +     KEEFDLPMNFASKI
Sbjct: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEVNTILFMFFRYDFYTKEEFDLPMNFASKI 600

Query: 601 AAKAKQNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKE 660
           A KAKQNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKE
Sbjct: 601 ATKAKQNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKE 660

Query: 661 KIQKLLVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEE 720
           KIQKLLVDSVHPKLILQKLVEEFLKRIEL SRRELYYWHAYYNKRLPTETGTGALPKLEE
Sbjct: 661 KIQKLLVDSVHPKLILQKLVEEFLKRIELMSRRELYYWHAYYNKRLPTETGTGALPKLEE 720

Query: 721 FVAKFMSMYRKSSTNLVYDR 735
           FVAKFMSMYRKSSTNLVYDR
Sbjct: 721 FVAKFMSMYRKSSTNLVYDR 740

[Close]

BLAST of Cp4.1LG19g09300 vs. NCBI nr
Match: XP_023003996.1 (uncharacterized protein LOC111497446 [Cucurbita maxima] >XP_023003997.1 uncharacterized protein LOC111497446 [Cucurbita maxima])

HSP 1 Score: 1400 bits (3624), Expect = 0.0
Identity = 720/727 (99.04%), Postives = 722/727 (99.31%), Query Frame = 0


Query: 8   MKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANISPPGSRR 67
           MKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANISPPGSRR
Sbjct: 1   MKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANISPPGSRR 60

Query: 68  NNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSRKEEKLTY 127
           NNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSRKEEKLTY
Sbjct: 61  NNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSRKEEKLTY 120

Query: 128 SHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSILHQSKEVS 187
           SHG NRISQKPNH+RRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSILHQSKEVS
Sbjct: 121 SHGSNRISQKPNHNRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSILHQSKEVS 180

Query: 188 QVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMNNNVTGKR 247
           QVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIG+NNNVTGKR
Sbjct: 181 QVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGINNNVTGKR 240

Query: 248 NAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSRENSSRIS 307
           NAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAG GLSTTTTNSAAVSRENSSRIS
Sbjct: 241 NAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGAGLSTTTTNSAAVSRENSSRIS 300

Query: 308 TESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFDEATFIER 367
           TESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFDEATFIER
Sbjct: 301 TESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFDEATFIER 360

Query: 368 ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIM 427
           ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGP GSGKRVLIM
Sbjct: 361 ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPCGSGKRVLIM 420

Query: 428 ALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLA 487
           ALLREIYGDSCWNVSHDLR FQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLA
Sbjct: 421 ALLREIYGDSCWNVSHDLRCFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLA 480

Query: 488 KEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDN 547
           KEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDN
Sbjct: 481 KEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDN 540

Query: 548 DTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAI 607
           DTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIA KAKQNLRKAI
Sbjct: 541 DTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIATKAKQNLRKAI 600

Query: 608 MALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHP 667
           MALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHP
Sbjct: 601 MALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHP 660

Query: 668 KLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRKS 727
           KLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRKS
Sbjct: 661 KLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRKS 720

Query: 728 STNLVYD 734
           STNLVYD
Sbjct: 721 STNLVYD 727

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy TrEMBL
Match: A0A6J1HGX7 (uncharacterized protein LOC111463451 OS=Cucurbita moschata OX=3662 GN=LOC111463451 PE=4 SV=1)

HSP 1 Score: 1423 bits (3683), Expect = 0.0
Identity = 728/735 (99.05%), Postives = 732/735 (99.59%), Query Frame = 0


Query: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60
           MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI
Sbjct: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60

Query: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120
           SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR
Sbjct: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120

Query: 121 KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180
           KEEKLTYSHG NRISQKPNH+RRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL
Sbjct: 121 KEEKLTYSHGSNRISQKPNHNRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180

Query: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN 240
           HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDG+AIGMN
Sbjct: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGMAIGMN 240

Query: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300
           NN TGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR
Sbjct: 241 NNATGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300

Query: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360
           ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD
Sbjct: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360

Query: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420
           EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS
Sbjct: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420

Query: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480
           GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK
Sbjct: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480

Query: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540
           YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK
Sbjct: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540

Query: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAK 600
           VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFD+PMNFASKIA KAK
Sbjct: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDVPMNFASKIATKAK 600

Query: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660
           QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL
Sbjct: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660

Query: 661 LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720
           LV+SVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF
Sbjct: 661 LVESVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720

Query: 721 MSMYRKSSTNLVYDR 735
           MSMYRKSSTNLVYDR
Sbjct: 721 MSMYRKSSTNLVYDR 735

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy TrEMBL
Match: A0A6J1KQV6 (uncharacterized protein LOC111497446 OS=Cucurbita maxima OX=3661 GN=LOC111497446 PE=4 SV=1)

HSP 1 Score: 1400 bits (3624), Expect = 0.0
Identity = 720/727 (99.04%), Postives = 722/727 (99.31%), Query Frame = 0


Query: 8   MKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANISPPGSRR 67
           MKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANISPPGSRR
Sbjct: 1   MKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANISPPGSRR 60

Query: 68  NNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSRKEEKLTY 127
           NNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSRKEEKLTY
Sbjct: 61  NNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSRKEEKLTY 120

Query: 128 SHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSILHQSKEVS 187
           SHG NRISQKPNH+RRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSILHQSKEVS
Sbjct: 121 SHGSNRISQKPNHNRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSILHQSKEVS 180

Query: 188 QVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMNNNVTGKR 247
           QVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIG+NNNVTGKR
Sbjct: 181 QVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGINNNVTGKR 240

Query: 248 NAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSRENSSRIS 307
           NAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAG GLSTTTTNSAAVSRENSSRIS
Sbjct: 241 NAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGAGLSTTTTNSAAVSRENSSRIS 300

Query: 308 TESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFDEATFIER 367
           TESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFDEATFIER
Sbjct: 301 TESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFDEATFIER 360

Query: 368 ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIM 427
           ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGP GSGKRVLIM
Sbjct: 361 ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPCGSGKRVLIM 420

Query: 428 ALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLA 487
           ALLREIYGDSCWNVSHDLR FQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLA
Sbjct: 421 ALLREIYGDSCWNVSHDLRCFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLA 480

Query: 488 KEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDN 547
           KEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDN
Sbjct: 481 KEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDN 540

Query: 548 DTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAI 607
           DTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIA KAKQNLRKAI
Sbjct: 541 DTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIATKAKQNLRKAI 600

Query: 608 MALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHP 667
           MALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHP
Sbjct: 601 MALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHP 660

Query: 668 KLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRKS 727
           KLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRKS
Sbjct: 661 KLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRKS 720

Query: 728 STNLVYD 734
           STNLVYD
Sbjct: 721 STNLVYD 727

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy TrEMBL
Match: A0A5A7T3Q0 (Putative ATPase family associated with various cellular activities OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00140 PE=4 SV=1)

HSP 1 Score: 1267 bits (3278), Expect = 0.0
Identity = 641/734 (87.33%), Postives = 687/734 (93.60%), Query Frame = 0


Query: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60
           M PALNLMKQRKDGYEPSDTETEWQESPWNDP  KKLVLDYNNRR DSA SKKFS AAN+
Sbjct: 1   MSPALNLMKQRKDGYEPSDTETEWQESPWNDPNEKKLVLDYNNRRTDSAVSKKFSMAANV 60

Query: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120
           SPPG RRN G+TP RPAKDDSVLVM QRNISPLSRAERRRH+SPFKA  EEIGSSSMRSR
Sbjct: 61  SPPGLRRNGGQTPRRPAKDDSVLVMLQRNISPLSRAERRRHESPFKASGEEIGSSSMRSR 120

Query: 121 KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180
           KEEK TYSHG N+ SQKP+HSRRSVTAPRLR RDEHM A NDLSQRR+RAAP+L+V+SIL
Sbjct: 121 KEEKFTYSHGSNKTSQKPSHSRRSVTAPRLRMRDEHMIAANDLSQRRERAAPTLKVSSIL 180

Query: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN 240
            Q KE+S V S S+GEMNEMIADGR++RG  FN+P+VESTGSISPGDIFFSRDGL +GMN
Sbjct: 181 QQPKEISHVKSPSIGEMNEMIADGRINRGLAFNDPVVESTGSISPGDIFFSRDGLPVGMN 240

Query: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300
           NNVT KRNAFKNYISP+P FV+KKNDDTYNQV VNANGR V+S G GLSTTT +SAAVSR
Sbjct: 241 NNVTAKRNAFKNYISPKPTFVTKKNDDTYNQVVVNANGREVSSTGGGLSTTTNSSAAVSR 300

Query: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360
           ENSSRIS E+SKISDVSGRTSEST+RFIA+RRKKKN++WFSCMRNG CRTTKSPEKR FD
Sbjct: 301 ENSSRISMENSKISDVSGRTSESTKRFIANRRKKKNDIWFSCMRNGTCRTTKSPEKRPFD 360

Query: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420
           EAT+IE+ANVVEYLKPFWAD+HRPVSL+GF FHK EAQ LKQLV QDSFPHILFKGPRGS
Sbjct: 361 EATYIEKANVVEYLKPFWADQHRPVSLNGFTFHKHEAQLLKQLVSQDSFPHILFKGPRGS 420

Query: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480
           GKRVL+MALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSE+NAK
Sbjct: 421 GKRVLMMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSESNAK 480

Query: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540
           YALLGLAKEIGSEYSINVEARN+NPKA FKVV+L+DVDKA EDIQHLLRWIMDGYKDACK
Sbjct: 481 YALLGLAKEIGSEYSINVEARNVNPKAIFKVVVLIDVDKAAEDIQHLLRWIMDGYKDACK 540

Query: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAK 600
           VVLCC++D+GIL+SVISRCKVIKINPPVTHEI+DVLI+IA+KEEFDLPMNFASKIA KAK
Sbjct: 541 VVLCCEDDSGILESVISRCKVIKINPPVTHEIMDVLIKIAEKEEFDLPMNFASKIATKAK 600

Query: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660
           QNLR+AIMALEACKAHNYPFSDDQPIPIGWE+AVVELAAHILEDP+NPRLH VKEKIQKL
Sbjct: 601 QNLRRAIMALEACKAHNYPFSDDQPIPIGWEDAVVELAAHILEDPSNPRLHQVKEKIQKL 660

Query: 661 LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720
           LVDSVHPKLILQKLVE+FLKRIE+RSRRELYYWHAYYNKRLP ETG GALPKLEEFVAKF
Sbjct: 661 LVDSVHPKLILQKLVEQFLKRIEMRSRRELYYWHAYYNKRLPIETGVGALPKLEEFVAKF 720

Query: 721 MSMYRKSSTNLVYD 734
           MSMYRKSSTN VYD
Sbjct: 721 MSMYRKSSTNFVYD 734

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy TrEMBL
Match: A0A1S3B2J9 (uncharacterized protein LOC103485060 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485060 PE=4 SV=1)

HSP 1 Score: 1267 bits (3278), Expect = 0.0
Identity = 641/734 (87.33%), Postives = 687/734 (93.60%), Query Frame = 0


Query: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60
           M PALNLMKQRKDGYEPSDTETEWQESPWNDP  KKLVLDYNNRR DSA SKKFS AAN+
Sbjct: 1   MSPALNLMKQRKDGYEPSDTETEWQESPWNDPNEKKLVLDYNNRRTDSAVSKKFSMAANV 60

Query: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120
           SPPG RRN G+TP RPAKDDSVLVM QRNISPLSRAERRRH+SPFKA  EEIGSSSMRSR
Sbjct: 61  SPPGLRRNGGQTPRRPAKDDSVLVMLQRNISPLSRAERRRHESPFKASGEEIGSSSMRSR 120

Query: 121 KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180
           KEEK TYSHG N+ SQKP+HSRRSVTAPRLR RDEHM A NDLSQRR+RAAP+L+V+SIL
Sbjct: 121 KEEKFTYSHGSNKTSQKPSHSRRSVTAPRLRMRDEHMIAANDLSQRRERAAPTLKVSSIL 180

Query: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN 240
            Q KE+S V S S+GEMNEMIADGR++RG  FN+P+VESTGSISPGDIFFSRDGL +GMN
Sbjct: 181 QQPKEISHVKSPSIGEMNEMIADGRINRGLAFNDPVVESTGSISPGDIFFSRDGLPVGMN 240

Query: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300
           NNVT KRNAFKNYISP+P FV+KKNDDTYNQV VNANGR V+S G GLSTTT +SAAVSR
Sbjct: 241 NNVTAKRNAFKNYISPKPTFVTKKNDDTYNQVVVNANGREVSSTGGGLSTTTNSSAAVSR 300

Query: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360
           ENSSRIS E+SKISDVSGRTSEST+RFIA+RRKKKN++WFSCMRNG CRTTKSPEKR FD
Sbjct: 301 ENSSRISMENSKISDVSGRTSESTKRFIANRRKKKNDIWFSCMRNGTCRTTKSPEKRPFD 360

Query: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420
           EAT+IE+ANVVEYLKPFWAD+HRPVSL+GF FHK EAQ LKQLV QDSFPHILFKGPRGS
Sbjct: 361 EATYIEKANVVEYLKPFWADQHRPVSLNGFTFHKHEAQLLKQLVSQDSFPHILFKGPRGS 420

Query: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480
           GKRVL+MALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSE+NAK
Sbjct: 421 GKRVLMMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSESNAK 480

Query: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540
           YALLGLAKEIGSEYSINVEARN+NPKA FKVV+L+DVDKA EDIQHLLRWIMDGYKDACK
Sbjct: 481 YALLGLAKEIGSEYSINVEARNVNPKAIFKVVVLIDVDKAAEDIQHLLRWIMDGYKDACK 540

Query: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAK 600
           VVLCC++D+GIL+SVISRCKVIKINPPVTHEI+DVLI+IA+KEEFDLPMNFASKIA KAK
Sbjct: 541 VVLCCEDDSGILESVISRCKVIKINPPVTHEIMDVLIKIAEKEEFDLPMNFASKIATKAK 600

Query: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660
           QNLR+AIMALEACKAHNYPFSDDQPIPIGWE+AVVELAAHILEDP+NPRLH VKEKIQKL
Sbjct: 601 QNLRRAIMALEACKAHNYPFSDDQPIPIGWEDAVVELAAHILEDPSNPRLHQVKEKIQKL 660

Query: 661 LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720
           LVDSVHPKLILQKLVE+FLKRIE+RSRRELYYWHAYYNKRLP ETG GALPKLEEFVAKF
Sbjct: 661 LVDSVHPKLILQKLVEQFLKRIEMRSRRELYYWHAYYNKRLPIETGVGALPKLEEFVAKF 720

Query: 721 MSMYRKSSTNLVYD 734
           MSMYRKSSTN VYD
Sbjct: 721 MSMYRKSSTNFVYD 734

[Close]

BLAST of Cp4.1LG19g09300 vs. ExPASy TrEMBL
Match: A0A0A0KJ59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502800 PE=4 SV=1)

HSP 1 Score: 1265 bits (3273), Expect = 0.0
Identity = 640/734 (87.19%), Postives = 686/734 (93.46%), Query Frame = 0


Query: 1   MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI 60
           M PALNLMKQRKDGYEPSDTETEWQESPWNDPK KKLVLDYNNRR DSA  KKFS AAN+
Sbjct: 1   MSPALNLMKQRKDGYEPSDTETEWQESPWNDPKEKKLVLDYNNRRTDSAVPKKFSMAANV 60

Query: 61  SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR 120
           SPPG RRN GKTP RPAKDDSVLVM QRNISPLSRAERRRH+SPFKA  EEIGSSSMRSR
Sbjct: 61  SPPGLRRNGGKTPRRPAKDDSVLVMLQRNISPLSRAERRRHESPFKASGEEIGSSSMRSR 120

Query: 121 KEEKLTYSHGGNRISQKPNHSRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL 180
           KEEK TYSHG N+ SQKP++SRRSVTAPRLR +DEHM A NDLSQRR+RAAP+L+V+SIL
Sbjct: 121 KEEKFTYSHGSNKTSQKPSYSRRSVTAPRLRMKDEHMIAANDLSQRRERAAPTLKVSSIL 180

Query: 181 HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGMN 240
            Q KEVS   S S+GEMNE+IADGR++RG   N+P+VESTGSISPGDIFFSRDGL +GMN
Sbjct: 181 QQPKEVSHAKSPSIGEMNELIADGRINRGLALNDPVVESTGSISPGDIFFSRDGLPVGMN 240

Query: 241 NNVTGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR 300
           NNVT KRNAFKNYISP+P FV+KKNDDTYNQVEVNANGRGV+S G GLSTTT +SAAVSR
Sbjct: 241 NNVTAKRNAFKNYISPKPTFVTKKNDDTYNQVEVNANGRGVSSTGGGLSTTTNSSAAVSR 300

Query: 301 ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD 360
           ENSSRIS E+SKISDVSGRTSESTRRFIA+RRKKKN++WFSCMRNG CRTTKSPEKR FD
Sbjct: 301 ENSSRISLENSKISDVSGRTSESTRRFIANRRKKKNDIWFSCMRNGTCRTTKSPEKRPFD 360

Query: 361 EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS 420
           EAT+IE+ANVVEYLKPFWAD+HRPVSL+GF FHK EAQ LKQLV QDSFPHILFKGPRGS
Sbjct: 361 EATYIEKANVVEYLKPFWADQHRPVSLNGFTFHKHEAQLLKQLVSQDSFPHILFKGPRGS 420

Query: 421 GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK 480
           GKRVL+MALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSE+NAK
Sbjct: 421 GKRVLMMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSESNAK 480

Query: 481 YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK 540
           YALLGLAKEIGSEYSINVEARN+NPKA FKVV+LLDVDKA EDIQHLLRWIMDGYKDACK
Sbjct: 481 YALLGLAKEIGSEYSINVEARNVNPKAIFKVVVLLDVDKATEDIQHLLRWIMDGYKDACK 540

Query: 541 VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAK 600
           VVLCC++D+GIL+SVISRCKVIKINPPVTHEI+DVLI+IA+KEEFDLPMNFASKIA KAK
Sbjct: 541 VVLCCEDDSGILESVISRCKVIKINPPVTHEIMDVLIKIAEKEEFDLPMNFASKIATKAK 600

Query: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL 660
           QNLRKAIMALEACKAHNYPFSDDQPIPIGWE+A+VELA+HILEDP+NPRLH VKEKIQKL
Sbjct: 601 QNLRKAIMALEACKAHNYPFSDDQPIPIGWEDALVELASHILEDPSNPRLHQVKEKIQKL 660

Query: 661 LVDSVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF 720
           LVDSVHPKLILQKLVE+FLKRIE+RSRRELYYWHAYYNKRLP ETG GALPKLEEFVAKF
Sbjct: 661 LVDSVHPKLILQKLVEQFLKRIEMRSRRELYYWHAYYNKRLPIETGVGALPKLEEFVAKF 720

Query: 721 MSMYRKSSTNLVYD 734
           MSMYRKSS N VYD
Sbjct: 721 MSMYRKSSNNFVYD 734

[Close]

BLAST of Cp4.1LG19g09300 vs. TAIR 10
Match: AT5G27740.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-67
Identity = 136/351 (38.75%), Postives = 218/351 (62.11%), Query Frame = 0


Query: 378 WADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIMALLREIYGDS 437
           W DK+RP SL     H+  AQ LK+LV +   PH+LF GP GSGK+ LIMALL++IYG S
Sbjct: 3   WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGAS 62

Query: 438 CWNVSHDLRRFQIQERKLT-QVFVPLTSSAHHVELNLSSEA-NAKYALLGLAKEIGSEYS 497
              V  + R +++     T  + +   SS +HVEL  S      +Y +  + KE+     
Sbjct: 63  AEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRP 122

Query: 498 INVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDNDTGILDSV 557
           I+ +      K  +KV++L +VDK   + QH LR  M+ Y  +C+++LCC++ + + +++
Sbjct: 123 IDTKG-----KKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAI 182

Query: 558 ISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAIMALEACKA 617
            SRC  ++IN P   EI+ VL  +AKKE   LP  FA++IA K+ ++LR+AI++LE C+ 
Sbjct: 183 KSRCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRV 242

Query: 618 HNYPFSDDQPI-PIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHPKLILQKL 677
            NYPF+ +Q I P+ WEE V E+A  ++++ +  +L  V+ K+ +LLV+ + P++IL++L
Sbjct: 243 QNYPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRL 302

Query: 678 VEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYR 726
           + E LK+++   + E+ +W AYY  R+    G  A+  +E FVAKFMS+Y+
Sbjct: 303 LHELLKKLDSELKLEVCHWAAYYEHRM--RLGQKAIFHIEAFVAKFMSIYK 346

[Close]

BLAST of Cp4.1LG19g09300 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 77.4 bits (189), Expect = 5.3e-14
Identity = 56/245 (22.86%), Postives = 102/245 (41.63%), Query Frame = 0


Query: 368 ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIM 427
           A V++  +P W +K+RP  +   A  +   + L   +     PH+LF GP G+GK    +
Sbjct: 2   APVLQSSQP-WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 61

Query: 428 ALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLA 487
           A+  +++G    N S D R   +   K+         S H                    
Sbjct: 62  AIAHQLFGVLELNASDD-RGINVVRTKIKDFAAVAVGSNHR------------------- 121

Query: 488 KEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDN 547
                        ++  P  SFK++IL + D   ED Q+ LR  M+ Y    +    C+ 
Sbjct: 122 -------------QSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNY 181

Query: 548 DTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAI 607
            + I++ + SRC   +  P     + + ++ I  +E   L     S +++ ++ +LR+AI
Sbjct: 182 ISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 212

Query: 608 MALEA 613
             L++
Sbjct: 242 TYLQS 212

[Close]

BLAST of Cp4.1LG19g09300 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 75.5 bits (184), Expect = 2.0e-13
Identity = 57/249 (22.89%), Postives = 107/249 (42.97%), Query Frame = 0


Query: 368 ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIM 427
           A V++  +P W +K+RP  +   A  +   + L   +     PH+LF GP G+GK    +
Sbjct: 2   APVLQSSQP-WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 61

Query: 428 ALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGL- 487
           A+  +++G                         P    +  +ELN S +         + 
Sbjct: 62  AIAHQLFG-------------------------PELYKSRVLELNASDDRGINVVRTKIK 121

Query: 488 ---AKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVL 547
              A  +GS +      ++  P  SFK++IL + D   ED Q+ LR  M+ Y    +   
Sbjct: 122 DFAAVAVGSNH-----RQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFF 181

Query: 548 CCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNL 607
            C+  + I++ + SRC   +  P     + + ++ I  +E   L     S +++ ++ +L
Sbjct: 182 ICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDL 219

Query: 608 RKAIMALEA 613
           R+AI  L++
Sbjct: 242 RRAITYLQS 219

[Close]

BLAST of Cp4.1LG19g09300 vs. TAIR 10
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 75.5 bits (184), Expect = 2.0e-13
Identity = 57/249 (22.89%), Postives = 107/249 (42.97%), Query Frame = 0


Query: 368 ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIM 427
           A V++  +P W +K+RP  +   A  +   + L   +     PH+LF GP G+GK    +
Sbjct: 2   APVLQSSQP-WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 61

Query: 428 ALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGL- 487
           A+  +++G                         P    +  +ELN S +         + 
Sbjct: 62  AIAHQLFG-------------------------PELYKSRVLELNASDDRGINVVRTKIK 121

Query: 488 ---AKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVL 547
              A  +GS +      ++  P  SFK++IL + D   ED Q+ LR  M+ Y    +   
Sbjct: 122 DFAAVAVGSNH-----RQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFF 181

Query: 548 CCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNL 607
            C+  + I++ + SRC   +  P     + + ++ I  +E   L     S +++ ++ +L
Sbjct: 182 ICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDL 219

Query: 608 RKAIMALEA 613
           R+AI  L++
Sbjct: 242 RRAITYLQS 219

[Close]

BLAST of Cp4.1LG19g09300 vs. TAIR 10
Match: AT1G77470.1 (replication factor C subunit 3 )

HSP 1 Score: 68.2 bits (165), Expect = 3.2e-11
Identity = 55/255 (21.57%), Postives = 110/255 (43.14%), Query Frame = 0


Query: 378 WADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGSGKRVLIMALLREIYGDS 437
           W +K+RP SL   A H+    T+ +L  ++  PH+L  GP G+GK   I+A+ R++YG  
Sbjct: 41  WVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPK 100

Query: 438 CWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLAKEIGSEYSIN 497
             N+                           +ELN S +         + ++  S  S +
Sbjct: 101 YRNMI--------------------------LELNASDDRGIDVVRQQI-QDFASTQSFS 160

Query: 498 VEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDNDTGILDSVIS 557
           +       K+S K+V+L + D   +D Q  LR +++ Y  + +  L  ++   I+ ++ S
Sbjct: 161 L------GKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQS 220

Query: 558 RCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIAAKAKQNLRKAIMALEACKAHN 617
           RC   +  P     +   L  + + E   +     + +   +  ++RKA+  L++    +
Sbjct: 221 RCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDMRKALNILQSTHMAS 262

Query: 618 YPFSDDQPIPIGWEE 633
              ++++   I  E+
Sbjct: 281 KEITEEESKQITEED 262

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g09300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXX4	1.5e-66	38.75	Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1	[more]
Q852K3	7.6e-66	37.50	Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 ...	[more]
P40938	1.2e-55	34.47	Replication factor C subunit 3 OS=Homo sapiens OX=9606 GN=RFC3 PE=1 SV=2	[more]
Q2TBV1	3.5e-55	34.19	Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1	[more]
Q8R323	3.5e-55	33.90	Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1	[more]

BLAST of Cp4.1LG19g09300 vs. NCBI nr


Match Name	Identity	Description
XP_023517446.1	100.00	uncharacterized protein LOC111781207 [Cucurbita pepo subsp. pepo] >XP_023517447....	[more]
KAG6594820.1	99.18	Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022963157.1	99.05	uncharacterized protein LOC111463451 [Cucurbita moschata] >XP_022963158.1 unchar...	[more]
KAG7026786.1	97.16	Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023003996.1	99.04	uncharacterized protein LOC111497446 [Cucurbita maxima] >XP_023003997.1 uncharac...	[more]

BLAST of Cp4.1LG19g09300 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1HGX7	99.05	uncharacterized protein LOC111463451 OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]
A0A6J1KQV6	99.04	uncharacterized protein LOC111497446 OS=Cucurbita maxima OX=3661 GN=LOC111497446...	[more]
A0A5A7T3Q0	87.33	Putative ATPase family associated with various cellular activities OS=Cucumis me...	[more]
A0A1S3B2J9	87.33	uncharacterized protein LOC103485060 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KJ59	87.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502800 PE=4 SV=1	[more]

BLAST of Cp4.1LG19g09300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27740.1	1.1e-67	38.75	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	5.3e-14	22.86	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.1	2.0e-13	22.89	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.3	2.0e-13	22.89	ATPase family associated with various cellular activities (AAA)	[more]
AT1G77470.1	3.2e-11	21.57	replication factor C subunit 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 376..567 e-value: 6.6E-35 score: 122.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 369..613
None	No IPR available	GENE3D	1.20.272.10		coord: 629..724 e-value: 5.8E-20 score: 73.3
None	No IPR available	GENE3D	1.10.8.60		coord: 569..626 e-value: 1.8E-12 score: 48.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..80
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 184..730
None	No IPR available	PANTHER	PTHR11669:SF25	OS02G0704966 PROTEIN	coord: 184..730
None	No IPR available	CDD	cd00009	AAA	coord: 396..562 e-value: 1.6123E-4 score: 40.5923
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 629..724

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g09300.1	Cp4.1LG19g09300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity