Cp4.1LG19g08990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g08990
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	thioredoxin H-type
Location	Cp4.1LG19: 6208021 .. 6210325 (-)
RNA-Seq Expression	Cp4.1LG19g08990
Synteny	Cp4.1LG19g08990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCGTTTCGTGCGTCGGTTTTCTCAGAGATTCGTAAAAAGTAAGGGAATAATGGCAGCCGCAGCAGAGGGACGAGTCATTCGCTGTAACACCATTGATTCATGGAACCATCAAATTCAGAAGGGCAATGCCTCTGAGGAGCTGGTAAGCACCGTTTCAATTCTATTCGATAATATGCTCCTCATTTCAATTGGATATATGATCATAATTGATTGTCTTTTCGGCTGAACAATGGCGGAGTTTTCCTGTTTTTGCATTACTTGATTTGATCTGGAGTCTGTTGTGATTCTAAATGATATACATATGCGCGATGAACTTAAGTTTTTCATTCTTTGATCTTTTTTTCTTTGCTTTTGTGATATGGTAGAAAAAGTAGTGTTTCGAATCTTTCGTGCTTCGCTTTTCTTTATTCAACAATCAATCTCATTGTTGTCTCCCACTTATTGCTTTCCACAGCGAACAATTTGGATACATGTTTTAGTAGATTTTAGATCATTATACGAAGCCACCCAACCCAATCCAATCCTTGACTACATTTCGCCACCAATCATTTTCTCGCCAGAATAGTTCCTATTTTAATGTAGTAGGGACTAAACCAATTATTGAGTTCTTGACACTTGAACTTAGTTACTGTTCGTGTCATATAGTTCGATTTTGCTCATGAGTGCTGAAACTGATGCAGATAGTTGTGGATTTCTCTGCATCATGGTGCGGTCCATGTCGGTTCATTGAACCTTTTCTAAACCAGCTTGCTCAAAAATTTCCCACTGTCACATTTCTAAAGGTTGATGTGGATGATCTCGAGGTACTGTAGATTATAATTTATGAGTACCTCTCCTGCTTTCTCTTGTAAAACTCTGTTGATTGGTGCAGTCTGTAGCTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTCATGTTCCTGAAAGAGGGAAGAATTGTGGACAAAGTGGTTGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATGTCTGCTACTGCTTCTGCTTGATACTCAATCATGGACGATTGGGCTCTGTAGTAGGATATAAAGGACTTACTATACTAGGAAACCGCCATAATTTTCAATTCTTGGTTACCAACTCCTATCCGCTTGCTTTGTTGTTACTAGTGAACATGGTGTATTCTCCCTTTAGAAGTGGCTTTTATTGCTTGTCTTTTCTTCTTCCTTGTAAGTGAAAAACATTGTCATTTTTGCATTACTTTAATTGGGATTTGGAATCTGATATTCAGTGAGCCATTGCTTGGACTCGTGAGCACTAATTTTCTCCATAAAGCTGAAAGGAAAAGAAATTGATTTCTTTAGGAGGAAGATTTGTTTAACATATCTTATTAGATTGTTCTGAATTTGCACCCTTTGTTAAATTCGATTAGACAGTAAAGTCGTGCATTCTGGAATGAAATTATACCCTACTCCATAACTGGAGGAATCTGAACCTTTGGATCTTATCATATCCTATGCAAAAAGGTTCCACTCAAACAAAAGGAAACGGATCCTAAGTGGGGTTGATTTTTTTTCCCAATATAACAAACTGAAATAAATTACAGGATATAATAAATTAACTATTTTTTTCTCAAGACCCATTTCCAGTAAAAATGCCAGGAATGGGAATTGAAACACAACCTCAGGGCCTTAGATTGCAGAACCCCGGGGATTACAAACTTTACGACCTATACCTAAGAATCTATTGCCTTCGGCACCACACACATCCATGAAGAAAAATCGACTCAAAATGAAAATCAAATCATCAGACACAACTTGAAAAGGTACTCCTGTACCCATCATCCTTCTGCTTGCTCTTGTTACAGGTAGTTGGTAGTTTAAGTCACTGAATGCGACCCTTCATAGGCAGCTAAATCCTCCTCTTTTCAGCCAACTCAATCAACCCTTCCAATTGGTTTCTGCAGCAGTAGTTATTGGAGCACATACAGCTTCGACCGATAGTCGCTTCAACACGTTTGGGCATGGATCTTTCCCAAAGTTAGTATTGGATATGGTAACGGCACATCTTTGCTTCCCTATGCACCTCTGTAGAAAGAGATGAAAATATGAGGTGGGATTTATATACAGACAATGAAACAACAAGCAAAAATGGATCTTAGTTTTCGCACCTTCTCTAGAGTGTCGTACGACATAGGAGCATGGCAAGTTCCTTGCTGGTAGCTCCCGCAGGTTCCTAATGGTGTTCCAAAGCTTGCAAATTTGATTGAGGTTATGGAATAACCTACAGAACACTTGAGATGAACTTTGGGCCGATGTAAATCCTCCGACTTT

mRNA sequence

AATCCGTTTCGTGCGTCGGTTTTCTCAGAGATTCGTAAAAAGTAAGGGAATAATGGCAGCCGCAGCAGAGGGACGAGTCATTCGCTGTAACACCATTGATTCATGGAACCATCAAATTCAGAAGGGCAATGCCTCTGAGGAGCTGATAGTTGTGGATTTCTCTGCATCATGGTGCGGTCCATGTCGGTTCATTGAACCTTTTCTAAACCAGCTTGCTCAAAAATTTCCCACTGTCACATTTCTAAAGGTTGATGTGGATGATCTCGAGTCTGTAGCTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTCATGTTCCTGAAAGAGGGAAGAATTGTGGACAAAGTGGTTGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATGTCTGCTACTGCTTCTGCTTGATACTCAATCATGGACGATTGGGCTCTGTAGTAGGATATAAAGGACTTACTATACTAGGAAACCGCCATAATTTTCAATTCTTGGTTACCAACTCCTATCCGCTTGCTTTGTTGTTACTAGTGAACATGGTGTATTCTCCCTTTAGAAGTGGCTTTTATTGCTTGTCTTTTCTTCTTCCTTGTAAGTGAAAAACATTGTCATTTTTGCATTACTTTAATTGGGATTTGGAATCTGATATTCAGTGAGCCATTGCTTGGACTCGTGAGCACTAATTTTCTCCATAAAGCTGAAAGGAAAAGAAATTGATTTCTTTAGGAGGAAGATTTGTTTAACATATCTTATTAGATTGTTCTGAATTTGCACCCTTTGTTAAATTCGATTAGACAGTAAAGTCGTGCATTCTGGAATGAAATTATACCCTACTCCATAACTGGAGGAATCTGAACCTTTGGATCTTATCATATCCTATGCAAAAAGGTTCCACTCAAACAAAAGGAAACGGATCCTAAGTGGGGTTGATTTTTTTTCCCAATATAACAAACTGAAATAAATTACAGGATATAATAAATTAACTATTTTTTTCTCAAGACCCATTTCCAGTAAAAATGCCAGGAATGGGAATTGAAACACAACCTCAGGGCCTTAGATTGCAGAACCCCGGGGATTACAAACTTTACGACCTATACCTAAGAATCTATTGCCTTCGGCACCACACACATCCATGAAGAAAAATCGACTCAAAATGAAAATCAAATCATCAGACACAACTTGAAAAGGTACTCCTGTACCCATCATCCTTCTGCTTGCTCTTGTTACAGGTAGTTGGTAGTTTAAGTCACTGAATGCGACCCTTCATAGGCAGCTAAATCCTCCTCTTTTCAGCCAACTCAATCAACCCTTCCAATTGGTTTCTGCAGCAGTAGTTATTGGAGCACATACAGCTTCGACCGATAGTCGCTTCAACACGTTTGGGCATGGATCTTTCCCAAAGTTAGTATTGGATATGGTAACGGCACATCTTTGCTTCCCTATGCACCTCTGTAGAAAGAGATGAAAATATGAGGTGGGATTTATATACAGACAATGAAACAACAAGCAAAAATGGATCTTAGTTTTCGCACCTTCTCTAGAGTGTCGTACGACATAGGAGCATGGCAAGTTCCTTGCTGGTAGCTCCCGCAGGTTCCTAATGGTGTTCCAAAGCTTGCAAATTTGATTGAGGTTATGGAATAACCTACAGAACACTTGAGATGAACTTTGGGCCGATGTAAATCCTCCGACTTT

Coding sequence (CDS)

ATGGCAGCCGCAGCAGAGGGACGAGTCATTCGCTGTAACACCATTGATTCATGGAACCATCAAATTCAGAAGGGCAATGCCTCTGAGGAGCTGATAGTTGTGGATTTCTCTGCATCATGGTGCGGTCCATGTCGGTTCATTGAACCTTTTCTAAACCAGCTTGCTCAAAAATTTCCCACTGTCACATTTCTAAAGGTTGATGTGGATGATCTCGAGTCTGTAGCTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTCATGTTCCTGAAAGAGGGAAGAATTGTGGACAAAGTGGTTGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATGTCTGCTACTGCTTCTGCTTGA

Protein sequence

MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA

Homology

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.5e-45
Identity = 84/117 (71.79%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62
           AA EG+VI C+T+++WN Q+QKGN ++ LIVVDF+ASWCGPCRFI PFL +LA+K P VT
Sbjct: 2   AAEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATAS 120
           FLKVDVD+L++VA +W VE+MPTFMFLKEG+I+DKVVGAKK+ELQQT+ KHM ATAS
Sbjct: 62  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHM-ATAS 117

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-43
Identity = 81/117 (69.23%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 4   AAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVTF 63
           A EG+VI  +T+D+WN  +QKG   ++LIVVDF+ASWCGPC+FI  F  +LA+K PTVTF
Sbjct: 2   AEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTF 61

Query: 64  LKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 121
           LKVDVD+L+SVA DW VEAMPTFMFLKEG+IVDKVVGAKK+ELQQT+ KH+S+T++A
Sbjct: 62  LKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISSTSTA 118

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.1e-42
Identity = 74/113 (65.49%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62
           A+ EG+VI C+T+++WN Q+QK N S+ L+VVDF+ASWCGPCRFI PF   LA+K P V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMS 116
           FLKVD D+L+SVA DW ++AMPTFMFLKEG+I+DKVVGAKK+ELQ T+ KH++
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-36
Identity = 68/119 (57.14%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62
           ++ EG+V  C+ ++ WN   +KG  +++L+VVDF+ASWCGPCRFI P L  +A+K P V 
Sbjct: 8   SSEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVI 67

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMS-ATASA 121
           FLKVDVD+L++V+ +W VEAMPTF+F+K+G+ VD+VVGAKKEELQQT+ KH + AT +A
Sbjct: 68  FLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPATVTA 126

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.1e-34
Identity = 62/117 (52.99%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 4   AAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVTF 63
           A EG VI C+T++ WN +++  N S++LIV+DF+ASWC PCRFI P   ++A+KF  V F
Sbjct: 2   AGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVF 61

Query: 64  LKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 121
            K+DVD+L++VA+++ VEAMPTF+F+KEG I+D+VVGA K+E+ + + KH    ASA
Sbjct: 62  FKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118

[Close]

BLAST of Cp4.1LG19g08990 vs. NCBI nr
Match: XP_023517738.1 (thioredoxin H-type [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246 bits (628), Expect = 3.09e-82
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60
           MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT
Sbjct: 1   MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120
           VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA
Sbjct: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Cp4.1LG19g08990 vs. NCBI nr
Match: XP_022962966.1 (thioredoxin H-type [Cucurbita moschata])

HSP 1 Score: 243 bits (620), Expect = 5.13e-81
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60
           MAAAAEGRVIRCNTIDSWN QIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT
Sbjct: 1   MAAAAEGRVIRCNTIDSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120
           VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA
Sbjct: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Cp4.1LG19g08990 vs. NCBI nr
Match: KAG6594798.1 (hypothetical protein SDJN03_11351, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026767.1 hypothetical protein SDJN02_10773 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241 bits (616), Expect = 2.09e-80
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60
           MAAAAEGRVIRCNTIDSWN QIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT
Sbjct: 1   MAAAAEGRVIRCNTIDSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120
           VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSAT SA
Sbjct: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATVSA 120

[Close]

BLAST of Cp4.1LG19g08990 vs. NCBI nr
Match: XP_023003079.1 (thioredoxin H-type-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 240 bits (613), Expect = 6.00e-80
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60
           MAAAAEGRVIRCNTI SWN QIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT
Sbjct: 1   MAAAAEGRVIRCNTIGSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120
           VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA
Sbjct: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Cp4.1LG19g08990 vs. NCBI nr
Match: KAG6603933.1 (hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034113.1 hypothetical protein SDJN02_03840, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (585), Expect = 1.09e-75
Identity = 109/118 (92.37%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62
           A AEGRVIRCNTIDSWNHQIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+VT
Sbjct: 2   AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHM+AT+SA
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy TrEMBL
Match: A0A6J1HER7 (thioredoxin H-type OS=Cucurbita moschata OX=3662 GN=LOC111463317 PE=4 SV=1)

HSP 1 Score: 243 bits (620), Expect = 2.49e-81
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60
           MAAAAEGRVIRCNTIDSWN QIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT
Sbjct: 1   MAAAAEGRVIRCNTIDSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120
           VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA
Sbjct: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy TrEMBL
Match: A0A6J1KSA6 (thioredoxin H-type-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496792 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 2.91e-80
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60
           MAAAAEGRVIRCNTI SWN QIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT
Sbjct: 1   MAAAAEGRVIRCNTIGSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120
           VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA
Sbjct: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy TrEMBL
Match: A0A6J1GE02 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1)

HSP 1 Score: 228 bits (582), Expect = 1.51e-75
Identity = 108/118 (91.53%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62
           A AEGRVIRCNTIDSWNHQIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+VT
Sbjct: 2   AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA+KEELQQTVFKHM+AT+SA
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGARKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy TrEMBL
Match: A0A6J1IQD5 (thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1)

HSP 1 Score: 228 bits (581), Expect = 2.14e-75
Identity = 108/117 (92.31%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62
           A AEGRVIRCNTIDSWNHQIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+VT
Sbjct: 2   AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATAS 119
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHM+AT+S
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of Cp4.1LG19g08990 vs. ExPASy TrEMBL
Match: A0A6J1BTW6 (thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1)

HSP 1 Score: 218 bits (555), Expect = 1.98e-71
Identity = 103/117 (88.03%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62
           AA+EGRVIRCNT+D+WN QIQKGN S+ELIVVDF+ASWCGPCRFI PFL++LA K P+VT
Sbjct: 2   AASEGRVIRCNTVDAWNQQIQKGNGSQELIVVDFTASWCGPCRFIGPFLDELAHKCPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATAS 119
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHM+ATAS
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 118

[Close]

BLAST of Cp4.1LG19g08990 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-43
Identity = 74/113 (65.49%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62
           A+ EG+VI C+T+++WN Q+QK N S+ L+VVDF+ASWCGPCRFI PF   LA+K P V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMS 116
           FLKVD D+L+SVA DW ++AMPTFMFLKEG+I+DKVVGAKK+ELQ T+ KH++
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Cp4.1LG19g08990 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35
Identity = 62/117 (52.99%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 4   AAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVTF 63
           A EG VI C+T++ WN +++  N S++LIV+DF+ASWC PCRFI P   ++A+KF  V F
Sbjct: 2   AGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVF 61

Query: 64  LKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 121
            K+DVD+L++VA+++ VEAMPTF+F+KEG I+D+VVGA K+E+ + + KH    ASA
Sbjct: 62  FKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118

[Close]

BLAST of Cp4.1LG19g08990 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 5.8e-35
Identity = 67/118 (56.78%), Postives = 86/118 (72.88%), Query Frame = 0


Query: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKF-PTV 62
           AA EG+VI C+T D W  Q+ K   S +LIV+DF+ASWC PCR I P  N LA+KF  + 
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 63  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATAS 120
            F KVDVD+L+SVAK++GVEAMPTF+F+K G +VDK+VGA KE+LQ  + KH   T +
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119

[Close]

BLAST of Cp4.1LG19g08990 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-31
Identity = 60/117 (51.28%), Postives = 85/117 (72.65%), Query Frame = 0


Query: 4   AAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVTF 63
           AAEG VI C+T++ W  +++  N S++LIV+DF+A+WC PCRFI P    LA+K   V F
Sbjct: 2   AAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVF 61

Query: 64  LKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 121
            KVDVD+L +VA+++ V+AMPTF+F+KEG I + VVGA KEE+   + KH +  A+A
Sbjct: 62  FKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

[Close]

BLAST of Cp4.1LG19g08990 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-26
Identity = 50/105 (47.62%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 8   RVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVTFLKVD 67
           RV++ ++   W     +   S +L+VVDFSASWCGPCR IEP ++ +A KF  V F+K+D
Sbjct: 26  RVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLD 85

Query: 68  VDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFK 113
           VD+L  VAK++ V AMPTF+ +K G+ +++++GAKK+EL++ V K
Sbjct: 86  VDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g08990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	3.5e-45	71.79	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
Q07090	1.5e-43	69.23	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
P29448	2.1e-42	65.49	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
P29449	1.3e-36	57.14	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q39241	2.1e-34	52.99	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]

BLAST of Cp4.1LG19g08990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517738.1	3.09e-82	100.00	thioredoxin H-type [Cucurbita pepo subsp. pepo]	[more]
XP_022962966.1	5.13e-81	99.17	thioredoxin H-type [Cucurbita moschata]	[more]
KAG6594798.1	2.09e-80	98.33	hypothetical protein SDJN03_11351, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023003079.1	6.00e-80	98.33	thioredoxin H-type-like isoform X2 [Cucurbita maxima]	[more]
KAG6603933.1	1.09e-75	92.37	hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG19g08990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HER7	2.49e-81	99.17	thioredoxin H-type OS=Cucurbita moschata OX=3662 GN=LOC111463317 PE=4 SV=1	[more]
A0A6J1KSA6	2.91e-80	98.33	thioredoxin H-type-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496792 P...	[more]
A0A6J1GE02	1.51e-75	91.53	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1	[more]
A0A6J1IQD5	2.14e-75	92.31	thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1	[more]
A0A6J1BTW6	1.98e-71	88.03	thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1	[more]

BLAST of Cp4.1LG19g08990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	1.5e-43	65.49	thioredoxin H-type 1	[more]
AT1G45145.1	1.5e-35	52.99	thioredoxin H-type 5	[more]
AT1G19730.1	5.8e-35	56.78	Thioredoxin superfamily protein	[more]
AT5G42980.1	1.0e-31	51.28	thioredoxin 3	[more]
AT5G39950.1	2.2e-26	47.62	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 32..40 score: 53.4 coord: 40..49 score: 60.5 coord: 79..90 score: 40.28
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..119 e-value: 5.5E-38 score: 131.7
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 4..116
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 4..116
None	No IPR available	CDD	cd02947	TRX_family	coord: 27..110 e-value: 7.3328E-35 score: 113.807
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 14..110 e-value: 3.2E-29 score: 100.9
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..115 score: 14.361625
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 33..51
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 7..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g08990.1	Cp4.1LG19g08990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity