Cp4.1LG19g08960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g08960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein WUSCHEL-like
Location	Cp4.1LG19: 6310682 .. 6312517 (+)
RNA-Seq Expression	Cp4.1LG19g08960
Synteny	Cp4.1LG19g08960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCACAGATTTGGTGTGTGATTTCACTCCATGTGCCACTCTTTCATTATAAAAACTGTTCCTTTTGGGGTTTTATTATGAGGGTTTTTGAATTTGATATCATCAATGGATCATCAAAAGGCAGCTGCTCAGGGGAGCGAAGAAGGAAGCAACGGCAAAGGGGGGTTTGTGTGCCGGCAAAGCAGCACTCGGTGGACGCCCACGACCGACCAAATTAGAATCTTGAAGGAGCTTTATTACAACAATGGAGTTCGGTCCCCAAGCGCCGATCAAATCCAGAGGATCTCTGCTCGCCTTAGACAGTACGGTAAAATTGAAGGCAAGAACGTTTTTTATTGGTTTCAGAACCATAAGGCTCGTGAAAGACAGAAGAAAAGGTTCACTTCTTCTGCCTCTGATCATCTTCATCATCATCAACAACAACAACAAATTCCTGTTCCTAAACAACAACAACAACAACAACAACAGCTGCAATCTTCCTTAATTTCTTCGAAGCCTGAAGATTCCTCTTCCTCTCCTTTGTTCCACACCAAATACCCTCCAAGTATACCCTTTTTTGGGTCTTGATTCTTCTTCTTGTTCTTCGTTTTGTTTTGTTCGTATGAAGATCTTATGTTTTCTTTTTTTTTGTCTTGTTTTTGTGTTGGTTCTTCTGCAGCTCCATCTTCTTCGGTTATGGTGGCTGTCGGCCATATGGGAAATTACGGATATGGGTCTACCACTTTCGAGAACAGTTTTAGAGTAAGCTCTTTACACTCGAGGAAATAATCATACGTTTATAAGTAAGGAATACGTTAGTTAGCTTTTTTAGTAAGCTCAAAGTAAAGTCACGAGAGCTTACACTCAAAGTTGATAATATTATCACTTAAAAGTCGTAATTCCTAACATTTACGTAACCTGCTAAAATTCATATGATCCGATAATACCCTTCTCTTCAAACCCTCTAAAAATTGAAATTTTGTTGTGTGGAGAGTCGTGATTCCTAAAATTGATATGATCGACAATACCCACCTCTTCAAACTCTCTAAAAATTGAAATTTTGTTATGTGGAGATTCGTGGTTCCTAAAGTTAATATGATAGTTAATACCCACCTCTTCAAACCCTCTAAAAATTGAAATTTTGTTTTGTAGAGAGTTGTGATTCTCATAATTGATATGATCGGCAATACCCGCCTCTTCAAACCCTCTAAAAATTGAAATTTTGTTTCGTGGAGAGTCGTGATTCCTAAAATTGATATGATCGGCAATACCCACCTCTTCAAACCCTCCAAAAATTGATTTTTTTTTCTATGTGTATGTTTAGGAGTGTTCGATATCATCGGGAGGAAGTAGCAGCATGGTGGGGTCTCGTCGGAGCCACCACATGGGGTCGTGGATCGGCGTTGATCCATATTCTTCACCGGCATCCGCGGCGGCGACTGTATTTGAAAAGACTAAATATGTTGAAGAATCCATGGAAGACGAGGAGCAAGAGATAGAAACTCTCCCCCTTTTTCCCATCCATGATGACCGGAGTCTCGGCGGCTTCTGCAGCATGAAGCCGAAATATTCGGACGGCTACTATACTACCACTTGGTACGGCCGCTCCGACGACGGCGCCACCGGTTCGAGGACTTCGCTGGAGCTCAGCCTCAACTCTTACGCTGCCATCTCACCGGATGACGCAATCTGATGAAACCCATAAAGTAATCTTAAATTATGATGTTAATTAATCCCAGCTGAGGAAATGGGTTTGCCTTAATTTCTAATTAATTAGGTACTGAAAAACTGAAATTAAGAATATCTTTGTCTCTTATTATATGATCCCGACCGTGGAAGCCCTGTTTCCCTTGTG

mRNA sequence

TCTCTCACAGATTTGGTGTGTGATTTCACTCCATGTGCCACTCTTTCATTATAAAAACTGTTCCTTTTGGGGTTTTATTATGAGGGTTTTTGAATTTGATATCATCAATGGATCATCAAAAGGCAGCTGCTCAGGGGAGCGAAGAAGGAAGCAACGGCAAAGGGGGGTTTGTGTGCCGGCAAAGCAGCACTCGGTGGACGCCCACGACCGACCAAATTAGAATCTTGAAGGAGCTTTATTACAACAATGGAGTTCGGTCCCCAAGCGCCGATCAAATCCAGAGGATCTCTGCTCGCCTTAGACAGTACGGTAAAATTGAAGGCAAGAACGTTTTTTATTGGTTTCAGAACCATAAGGCTCGTGAAAGACAGAAGAAAAGGTTCACTTCTTCTGCCTCTGATCATCTTCATCATCATCAACAACAACAACAAATTCCTGTTCCTAAACAACAACAACAACAACAACAACAGCTGCAATCTTCCTTAATTTCTTCGAAGCCTGAAGATTCCTCTTCCTCTCCTTTGTTCCACACCAAATACCCTCCAACTCCATCTTCTTCGGTTATGGAGTGTTCGATATCATCGGGAGGAAGTAGCAGCATGGTGGGGTCTCGTCGGAGCCACCACATGGGGTCGTGGATCGGCGTTGATCCATATTCTTCACCGGCATCCGCGGCGGCGACTGTATTTGAAAAGACTAAATATGTTGAAGAATCCATGGAAGACGAGGAGCAAGAGATAGAAACTCTCCCCCTTTTTCCCATCCATGATGACCGGAGTCTCGGCGGCTTCTGCAGCATGAAGCCGAAATATTCGGACGGCTACTATACTACCACTTGGTACGGCCGCTCCGACGACGGCGCCACCGGTTCGAGGACTTCGCTGGAGCTCAGCCTCAACTCTTACGCTGCCATCTCACCGGATGACGCAATCTGATGAAACCCATAAAGTAATCTTAAATTATGATGTTAATTAATCCCAGCTGAGGAAATGGGTTTGCCTTAATTTCTAATTAATTAGGTACTGAAAAACTGAAATTAAGAATATCTTTGTCTCTTATTATATGATCCCGACCGTGGAAGCCCTGTTTCCCTTGTG

Coding sequence (CDS)

ATGGATCATCAAAAGGCAGCTGCTCAGGGGAGCGAAGAAGGAAGCAACGGCAAAGGGGGGTTTGTGTGCCGGCAAAGCAGCACTCGGTGGACGCCCACGACCGACCAAATTAGAATCTTGAAGGAGCTTTATTACAACAATGGAGTTCGGTCCCCAAGCGCCGATCAAATCCAGAGGATCTCTGCTCGCCTTAGACAGTACGGTAAAATTGAAGGCAAGAACGTTTTTTATTGGTTTCAGAACCATAAGGCTCGTGAAAGACAGAAGAAAAGGTTCACTTCTTCTGCCTCTGATCATCTTCATCATCATCAACAACAACAACAAATTCCTGTTCCTAAACAACAACAACAACAACAACAACAGCTGCAATCTTCCTTAATTTCTTCGAAGCCTGAAGATTCCTCTTCCTCTCCTTTGTTCCACACCAAATACCCTCCAACTCCATCTTCTTCGGTTATGGAGTGTTCGATATCATCGGGAGGAAGTAGCAGCATGGTGGGGTCTCGTCGGAGCCACCACATGGGGTCGTGGATCGGCGTTGATCCATATTCTTCACCGGCATCCGCGGCGGCGACTGTATTTGAAAAGACTAAATATGTTGAAGAATCCATGGAAGACGAGGAGCAAGAGATAGAAACTCTCCCCCTTTTTCCCATCCATGATGACCGGAGTCTCGGCGGCTTCTGCAGCATGAAGCCGAAATATTCGGACGGCTACTATACTACCACTTGGTACGGCCGCTCCGACGACGGCGCCACCGGTTCGAGGACTTCGCTGGAGCTCAGCCTCAACTCTTACGCTGCCATCTCACCGGATGACGCAATCTGA

Protein sequence

MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQQLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVMECSISSGGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPIHDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI

Homology

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy Swiss-Prot
Match: Q8LL11 (Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.4e-50
Identity = 138/291 (47.42%), Postives = 170/291 (58.42%), Query Frame = 0


Query: 12  EEGS--NGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGK 71
           E+GS  N    F+CRQ+STRWTPTTDQIRILK+LYYNNGVRSP+A+QIQRISA+LRQYGK
Sbjct: 28  EDGSNKNNSSNFMCRQNSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGK 87

Query: 72  IEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQQLQSSL--- 131
           IEGKNVFYWFQNHKARERQKKR  ++A+             +P Q Q Q+   +SS    
Sbjct: 88  IEGKNVFYWFQNHKARERQKKRLIAAAT--------TDNTNLPMQMQFQRGVWRSSADDP 147

Query: 132 ISSK--------PEDSSSSPLF------HTKYPPTPSSSVMECSISSGGSSSMVGSRRSH 191
           I  K        P  SS   L       H         S  +CSIS G S     S   H
Sbjct: 148 IHHKYTNPGVHCPSASSHGVLAVGQNGNHGYGALAMEKSFRDCSISPGSSM----SHHHH 207

Query: 192 HMGSWIGVDPYSSPASAAATVFEKTKYVE-------ESMEDEEQE----------IETLP 251
              +W GVDPYSS  +      EKTK+ E       E  ++E+QE          IETLP
Sbjct: 208 QNFAWAGVDPYSS--TTTYPFLEKTKHFENETLEADEEQQEEDQENYYYQRTTSAIETLP 267

Query: 252 LFPIHDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSY 267
           LFP+H++ ++  FC++K + S G + T WY R+DD    +R SLELSLNS+
Sbjct: 268 LFPMHEE-NISSFCNLKHQESSGGFYTEWY-RADDNLAAARASLELSLNSF 302

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy Swiss-Prot
Match: Q84VT7 (Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.8e-44
Identity = 122/291 (41.92%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60
           M+HQ     G   G N    F+CRQSS+RWTPT+DQIRILK+LYYNNGVRSP+A+QIQRI
Sbjct: 1   MEHQHNIEDG---GKNSNNSFLCRQSSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRI 60

Query: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ 120
           SA+LRQYGKIEGKNVFYWFQNHKARERQKKR  ++AS   +++    Q+ +P   +    
Sbjct: 61  SAKLRQYGKIEGKNVFYWFQNHKARERQKKRLIAAASATDNNNISSMQM-IPHLWRSPDD 120

Query: 121 QLQSSLISSKPEDSSSSPLFHTKYPPTPS-----------SSVMECSISSGGSSSMVGSR 180
             + +  ++ P     SP  H   P   +            S  ECSIS  G S      
Sbjct: 121 HHKYNTATTNPGVQCPSPSSHGVLPVVQTGNYGYGTLAMEKSFRECSISPPGGS------ 180

Query: 181 RSHHMGSWIGVDPY-----SSPASAAATVFEKTKYVEESMEDEEQE---------IETLP 240
             H   +W+GVDPY     +SPA+         K+ EE++++E++E         +ETL 
Sbjct: 181 -YHQNLTWVGVDPYNNMSTTSPATYPFLEKSNNKHYEETLDEEQEEENYQRGNSALETLS 240

Query: 241 LFPIHDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSY 267
           LFP+H++  +  FC    + S G+Y       SD+    +  +LEL+LNS+
Sbjct: 241 LFPMHEENIISNFCIKHHESSGGWY------HSDN---NNLAALELTLNSF 271

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy Swiss-Prot
Match: Q6YBV1 (Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-42
Identity = 135/288 (46.88%), Postives = 174/288 (60.42%), Query Frame = 0


Query: 3   HQKAAAQGSEEGSNGKGG--FVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 62
           +++  +QG  + +NG GG  F+CRQSSTRWTPTTDQIRILK+LYYNNGVRSP+A+QIQRI
Sbjct: 12  NEQQDSQGIGKINNGSGGSSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRI 71

Query: 63  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ 122
           SA+LRQYGKIEGKNVFYWFQNHKARERQKKRFT   +DH HHH     I     +     
Sbjct: 72  SAKLRQYGKIEGKNVFYWFQNHKARERQKKRFT---ADH-HHHMNVPTIHNHHYKPPPVY 131

Query: 123 QLQSSLIS-SKPEDSSSSPLFHTKYPPTPSS--------------SVMECSISSGGSSSM 182
              S++ S S P  S+ SP F T    TP S              S  EC+ISS   +++
Sbjct: 132 NKFSNMNSGSFPSSSNGSPGFLT----TPGSHVGNYGYGSVAMEKSFRECTISSTTDANV 191

Query: 183 VGSRRSHHMGSWIGV-DPYSSPASAAAT-----VFEKTKYVEESMEDE-EQEIETLPLFP 242
            GS   +   +WIG+ + Y +P +   T      +++T  +EE  E+    EIETLPLFP
Sbjct: 192 GGSMSQNI--AWIGINNEYHNPYTFIDTRKYMNGYDQTLEIEEEAEENYTAEIETLPLFP 251

Query: 243 IHDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSY 267
           +H D        +K   +D Y+     GR ++G    R SLEL+LNS+
Sbjct: 252 MHAD--------IKQDTAD-YFN----GRLENGC--PRASLELTLNSW 274

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy Swiss-Prot
Match: Q9SB92 (Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 2.4e-33
Identity = 111/271 (40.96%), Postives = 145/271 (53.51%), Query Frame = 0


Query: 3   HQKAAAQGSEEGSN------GKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQ 62
           HQ    Q  +E  N      G GG+ CRQ+STRWTPTT+QI+ILKELYYNN +RSP+ADQ
Sbjct: 6   HQHHHHQADQESGNNNNNKSGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQ 65

Query: 63  IQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTS---------------SASDH-- 122
           IQ+I+ARLRQ+GKIEGKNVFYWFQNHKARERQKKRF                 +A+DH  
Sbjct: 66  IQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPSSSPNSVMMAANDHYH 125

Query: 123 --LHHHQQQQQIPVPKQQQQQQQQLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVMECSI 182
             LHHH       VP Q+      ++ +        +   P F+       +SS  EC +
Sbjct: 126 PLLHHHH-----GVPMQRPANSVNVKLNQDHHLYHHNKPYPSFNNG-NLNHASSGTECGV 185

Query: 183 --SSGG--SSSMVGSRR-------SHHMGSWIGVDPYSSPASAAATVFEKTK---YVEES 228
             +S G  SS + GS         ++  G W  +D + S  SA    F++ K    +E  
Sbjct: 186 VNASNGYMSSHVYGSMEQDCSMNYNNVGGGWANMDHHYS--SAPYNFFDRAKPLFGLEGH 245

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy Swiss-Prot
Match: Q7XM13 (WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1 SV=3)

HSP 1 Score: 120.9 bits (302), Expect = 2.2e-26
Identity = 103/300 (34.33%), Postives = 146/300 (48.67%), Query Frame = 0


Query: 1   MDH------QKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSA 60
           MDH      Q+    G EE +   G  VCR S TRWTPTT+QI+IL+ELYY+ G+RSP++
Sbjct: 1   MDHMQQQQRQQVGGGGGEEVAGRGGVPVCRPSGTRWTPTTEQIKILRELYYSCGIRSPNS 60

Query: 61  DQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQ 120
           +QIQRI+A LRQYG+IEGKNVFYWFQNHKARERQKKR T+              +     
Sbjct: 61  EQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQKKRLTT------------LDVTTTTA 120

Query: 121 QQQQQQQLQSSLISSKPEDS-SSSPLFHTKYPPTPSS-SVMECSISSGGSSSMVGSRRSH 180
                     +++S  P  + +++P F   Y     +    + ++ +   ++M   +   
Sbjct: 121 AAADADASHLAVLSLSPTAAGATAPSFPGFYVGNGGAVQTDQANVVNWDCTAMAAEKT-- 180

Query: 181 HMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI--------HDDRS 240
            +  ++GV      A AA T +        +M    +E ETLPLFP+        H    
Sbjct: 181 FLQDYMGVSGVGCAAGAAPTPW--------AMTTTTREPETLPLFPVVFVGGDGAHRHAV 240

Query: 241 LGGFCSMKPKYSDG------------------YYTTTWYGRSDDGATGSRTSLELSLNSY 267
            GGF S   ++                     Y +++    S DG     TSLEL+L+SY
Sbjct: 241 HGGFPSNFQRWGSAAATSNTITVQQHLQQHNFYSSSSSQLHSQDGPAAG-TSLELTLSSY 277

[Close]

BLAST of Cp4.1LG19g08960 vs. NCBI nr
Match: XP_023518147.1 (protein WUSCHEL [Cucurbita pepo subsp. pepo])

HSP 1 Score: 524 bits (1350), Expect = 7.26e-187
Identity = 275/296 (92.91%), Postives = 275/296 (92.91%), Query Frame = 0


Query: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60
           MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI
Sbjct: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60

Query: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ 120
           SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ
Sbjct: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ 120

Query: 121 QLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM---------------------ECSISS 180
           QLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM                     ECSISS
Sbjct: 121 QLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISS 180

Query: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240
           GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI
Sbjct: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240

Query: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 275
           HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI
Sbjct: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 296

[Close]

BLAST of Cp4.1LG19g08960 vs. NCBI nr
Match: KAG7026743.1 (Protein WUSCHEL, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 517 bits (1331), Expect = 5.30e-184
Identity = 273/296 (92.23%), Postives = 273/296 (92.23%), Query Frame = 0


Query: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60
           MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI
Sbjct: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60

Query: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ 120
           SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQ 
Sbjct: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQ- 120

Query: 121 QLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM---------------------ECSISS 180
            LQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM                     ECSISS
Sbjct: 121 -LQSSLISSKPEDSSSSPLFHTKYPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISS 180

Query: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240
           GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI
Sbjct: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240

Query: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 275
           HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI
Sbjct: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 294

[Close]

BLAST of Cp4.1LG19g08960 vs. NCBI nr
Match: XP_022926877.1 (protein WUSCHEL-like [Cucurbita moschata] >KAG6594778.1 Protein WUSCHEL, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 515 bits (1326), Expect = 3.07e-183
Identity = 272/296 (91.89%), Postives = 272/296 (91.89%), Query Frame = 0


Query: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60
           MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI
Sbjct: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60

Query: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ 120
           SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHH QQQQIPVPKQQQQQQ 
Sbjct: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHHQQQQIPVPKQQQQQQ- 120

Query: 121 QLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM---------------------ECSISS 180
            LQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM                     ECSISS
Sbjct: 121 -LQSSLISSKPEDSSSSPLFHTKYPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISS 180

Query: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240
           GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI
Sbjct: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240

Query: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 275
           HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI
Sbjct: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 294

[Close]

BLAST of Cp4.1LG19g08960 vs. NCBI nr
Match: XP_023003921.1 (protein WUSCHEL [Cucurbita maxima])

HSP 1 Score: 499 bits (1284), Expect = 6.90e-177
Identity = 265/296 (89.53%), Postives = 268/296 (90.54%), Query Frame = 0


Query: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60
           MDHQKAAAQG+EEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI
Sbjct: 1   MDHQKAAAQGNEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60

Query: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ 120
           SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDH HHHQQ   IPVPKQQQQQQ 
Sbjct: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHHHHHQQ---IPVPKQQQQQQ- 120

Query: 121 QLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM---------------------ECSISS 180
            LQSSL+SSKPEDSSSSPLFHTK PPTPSSSVM                     ECSISS
Sbjct: 121 -LQSSLVSSKPEDSSSSPLFHTKCPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISS 180

Query: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240
           GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESME+EEQEIETLPLFPI
Sbjct: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEEEEQEIETLPLFPI 240

Query: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 275
           HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI
Sbjct: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 291

[Close]

BLAST of Cp4.1LG19g08960 vs. NCBI nr
Match: XP_038883674.1 (protein WUSCHEL isoform X2 [Benincasa hispida])

HSP 1 Score: 374 bits (960), Expect = 2.23e-127
Identity = 213/304 (70.07%), Postives = 232/304 (76.32%), Query Frame = 0


Query: 3   HQKAAAQGSEEGSN---GKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQR 62
           HQ+      ++GSN   GKGGF+CRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQR
Sbjct: 6   HQQQQQVNDQDGSNNNNGKGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQR 65

Query: 63  ISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTS----SASDHLHHHQQQQQIPVPKQQ 122
           ISARLRQYGKIEGKNVFYWFQNHKARERQKKRFT+    SAS    HH QQ Q P+PK Q
Sbjct: 66  ISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTTTASASASSSPTHHHQQHQFPLPKHQ 125

Query: 123 QQQQQQLQSS--LISSKPEDSSSS-PLFHTKYP------------------PTPSSSVME 182
                 + S+  + + KP DSSSS PLFH K P                  PT  +S  E
Sbjct: 126 H-----ISSTNNINNWKPHDSSSSSPLFHNKAPSSSVMVAVGHMGNYGYGSPTFDNSFRE 185

Query: 183 CSISSGGSSSMVGSRRSHHMGSWIGVDPYSSPASAAAT---VFEKTKYVEESMEDEEQEI 242
           CSISSGG SS+VG  RSH+MGSWIGVDPYSSP +AAA    VFEKTKYVEESMEDE+Q+I
Sbjct: 186 CSISSGGGSSVVG-YRSHNMGSWIGVDPYSSPTAAAAAGANVFEKTKYVEESMEDEDQDI 245

Query: 243 ETLPLFPIHDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISP 275
           ETLPLFPIH DR+LGGFCSMKP+YSD YYTTTWYGRSDDGA  SR SLELSLNSYAAISP
Sbjct: 246 ETLPLFPIHGDRNLGGFCSMKPEYSDSYYTTTWYGRSDDGAASSRASLELSLNSYAAISP 303

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy TrEMBL
Match: A0A6J1EFK3 (protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111433860 PE=3 SV=1)

HSP 1 Score: 515 bits (1326), Expect = 1.48e-183
Identity = 272/296 (91.89%), Postives = 272/296 (91.89%), Query Frame = 0


Query: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60
           MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI
Sbjct: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60

Query: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ 120
           SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHH QQQQIPVPKQQQQQQ 
Sbjct: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHHQQQQIPVPKQQQQQQ- 120

Query: 121 QLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM---------------------ECSISS 180
            LQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM                     ECSISS
Sbjct: 121 -LQSSLISSKPEDSSSSPLFHTKYPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISS 180

Query: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240
           GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI
Sbjct: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240

Query: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 275
           HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI
Sbjct: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 294

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy TrEMBL
Match: A0A6J1KQL8 (protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1)

HSP 1 Score: 499 bits (1284), Expect = 3.34e-177
Identity = 265/296 (89.53%), Postives = 268/296 (90.54%), Query Frame = 0


Query: 1   MDHQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60
           MDHQKAAAQG+EEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI
Sbjct: 1   MDHQKAAAQGNEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRI 60

Query: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQ 120
           SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDH HHHQQ   IPVPKQQQQQQ 
Sbjct: 61  SARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSASDHHHHHQQ---IPVPKQQQQQQ- 120

Query: 121 QLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM---------------------ECSISS 180
            LQSSL+SSKPEDSSSSPLFHTK PPTPSSSVM                     ECSISS
Sbjct: 121 -LQSSLVSSKPEDSSSSPLFHTKCPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISS 180

Query: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEEQEIETLPLFPI 240
           GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESME+EEQEIETLPLFPI
Sbjct: 181 GGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEEEEQEIETLPLFPI 240

Query: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 275
           HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI
Sbjct: 241 HDDRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAISPDDAI 291

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy TrEMBL
Match: A0A0A0KH83 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505860 PE=3 SV=1)

HSP 1 Score: 343 bits (879), Expect = 2.28e-115
Identity = 205/299 (68.56%), Postives = 224/299 (74.92%), Query Frame = 0


Query: 9   QGSEEG--SNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 68
           QG E G  SNGKGGF+CRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 17  QGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 76

Query: 69  YGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQQLQSSL 128
           YGKIEGKNVFYWFQNHKARERQKKRFTS+++  +            K        + S+ 
Sbjct: 77  YGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTTDFK--------ISSTN 136

Query: 129 --ISSKPEDSSSSPLFHTKYPPTPSSSVM---------------------ECSISSGGSS 188
             I+ K ED SSS   H K+PP PSSSVM                     ECSISSGG+S
Sbjct: 137 NNINWKSEDHSSSS--HNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNS 196

Query: 189 SMVGSRRSHHMGSWIGVDPYSSPASAAA----TVFEKTKYVEESMED-EEQEIETLPLFP 248
           S+VG  RSH+MGSWIG+DPYSSPA+AAA     VFEKTKYVEESMED EEQEIETLPLFP
Sbjct: 197 SVVG-YRSHNMGSWIGIDPYSSPAAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPLFP 256

Query: 249 IHDDRS-LGGFCSMKPKYSDGYYTTTWYGRSDD-GATGSRTSLELSLNSYAAISPDDAI 275
           IH DR+ LGGFCSMKP+YS+ YYTTTWYGRSDD GA GSR SLELSLNSYA ISPDD +
Sbjct: 257 IHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM 304

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy TrEMBL
Match: A0A5A7SHQ2 (Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001370 PE=3 SV=1)

HSP 1 Score: 342 bits (876), Expect = 6.28e-115
Identity = 202/305 (66.23%), Postives = 222/305 (72.79%), Query Frame = 0


Query: 9   QGSEEG--SNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 68
           QG E G  SNGK GF+CRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 20  QGGEGGGGSNGKSGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 79

Query: 69  YGKIEGKNVFYWFQNHKARERQKKRFTSSAS----------DHLHHHQQQQQIPVPKQQQ 128
           YGKIEGKNVFYWFQNHKARERQKKRFTS+++          DH        +I       
Sbjct: 80  YGKIEGKNVFYWFQNHKARERQKKRFTSNSNSPITTTTTTTDHF-------KISST---- 139

Query: 129 QQQQQLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVM---------------------EC 188
                  ++ I+ K ED SSS   H K+PP PSSSVM                     EC
Sbjct: 140 -------NNNINWKSEDHSSSS--HNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFREC 199

Query: 189 SISSGGSSSMVGSRRSHHMGSWIGVDPYSSPAS--AAATVFEKTKYVEESMED--EEQEI 248
           SISSGG+SS+VG  RSH+MGSWIG+DPYSS A+  +A  VFEKTKYVEESMED  EEQEI
Sbjct: 200 SISSGGNSSVVG-YRSHNMGSWIGIDPYSSAAAGGSANNVFEKTKYVEESMEDDHEEQEI 259

Query: 249 ETLPLFPIHDDRS-LGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAIS 275
           ETLPLFPIH DR+ LGGFCSMKP+YS+ YYTTTWYGRSDDGA GSR SLELSLNSYA IS
Sbjct: 260 ETLPLFPIHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDDGAAGSRASLELSLNSYATIS 303

[Close]

BLAST of Cp4.1LG19g08960 vs. ExPASy TrEMBL
Match: A0A6J1GEJ9 (protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111453464 PE=3 SV=1)

HSP 1 Score: 338 bits (866), Expect = 1.24e-113
Identity = 207/306 (67.65%), Postives = 224/306 (73.20%), Query Frame = 0


Query: 9   QGSEEGSNGKG--GFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 68
           QG+EEGSNG+G  GF+CRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 5   QGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 64

Query: 69  YGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQQLQSSL 128
           YGKIEGKNVFYWFQNHKARERQKKRFTS  SDH H  +QQQQ P              SL
Sbjct: 65  YGKIEGKNVFYWFQNHKARERQKKRFTS-GSDH-HFSKQQQQHP--------------SL 124

Query: 129 ISS---KPEDSSSSPLFHTKYPPT-------PSSSVM---------------------EC 188
           I S   KP+DSSSS  FH +Y P+       PSS VM                     EC
Sbjct: 125 IPSTLWKPQDSSSS--FHNRYRPSNEYVSIAPSSPVMVAVGHMGNYGYGSSTFDNSFREC 184

Query: 189 SISSGGSSSMVGSRRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEDEE-----QE 248
           SI SGGSSS+VGSR SH+MGSW+GVD  SSPA+    +FEKTKYVEE MEDEE     QE
Sbjct: 185 SILSGGSSSVVGSR-SHNMGSWMGVDRRSSPAT---DIFEKTKYVEEYMEDEEEEEEEQE 244

Query: 249 IETLPLFPIHD-DRSLGGFCSMKPKYSDGYYTTTWYGRSDDGATGSRTSLELSLNSYAAI 275
           IETLPLFPIH  DR+L GFCSM+ +YSD +YTTTWYG SDDGA GSRTSLELSLNSYA I
Sbjct: 245 IETLPLFPIHGGDRNLSGFCSMRQEYSDSFYTTTWYGSSDDGAAGSRTSLELSLNSYATI 288

[Close]

BLAST of Cp4.1LG19g08960 vs. TAIR 10
Match: AT2G17950.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34
Identity = 111/271 (40.96%), Postives = 145/271 (53.51%), Query Frame = 0


Query: 3   HQKAAAQGSEEGSN------GKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQ 62
           HQ    Q  +E  N      G GG+ CRQ+STRWTPTT+QI+ILKELYYNN +RSP+ADQ
Sbjct: 6   HQHHHHQADQESGNNNNNKSGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQ 65

Query: 63  IQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTS---------------SASDH-- 122
           IQ+I+ARLRQ+GKIEGKNVFYWFQNHKARERQKKRF                 +A+DH  
Sbjct: 66  IQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPSSSPNSVMMAANDHYH 125

Query: 123 --LHHHQQQQQIPVPKQQQQQQQQLQSSLISSKPEDSSSSPLFHTKYPPTPSSSVMECSI 182
             LHHH       VP Q+      ++ +        +   P F+       +SS  EC +
Sbjct: 126 PLLHHHH-----GVPMQRPANSVNVKLNQDHHLYHHNKPYPSFNNG-NLNHASSGTECGV 185

Query: 183 --SSGG--SSSMVGSRR-------SHHMGSWIGVDPYSSPASAAATVFEKTK---YVEES 228
             +S G  SS + GS         ++  G W  +D + S  SA    F++ K    +E  
Sbjct: 186 VNASNGYMSSHVYGSMEQDCSMNYNNVGGGWANMDHHYS--SAPYNFFDRAKPLFGLEGH 245

[Close]

BLAST of Cp4.1LG19g08960 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-22
Identity = 48/65 (73.85%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 27  STRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARE 86
           S+RW PT DQ+R+L+EL Y  G R+PSAD IQ+I+A+LR+YGKIEGKNVFYWFQNHKARE
Sbjct: 74  SSRWNPTPDQLRVLEEL-YRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARE 133

Query: 87  RQKKR 92
           RQK+R
Sbjct: 134 RQKRR 137

[Close]

BLAST of Cp4.1LG19g08960 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 99.4 bits (246), Expect = 4.9e-21
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 26 SSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKAR 85
          SS+RW PT DQI +L+ L Y  G+R+PSADQIQ+I+ RLR YG IEGKNVFYWFQNHKAR
Sbjct: 11 SSSRWNPTKDQITLLENL-YKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKAR 70

Query: 86 ERQKKR 92
          +RQK++
Sbjct: 71 QRQKQK 75

[Close]

BLAST of Cp4.1LG19g08960 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-19
Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 3   HQKAAAQGSEEGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 62
           HQ   A   E   + +   +   ++ RW PT +QI  L+EL Y +G R+P+ +QIQ+I++
Sbjct: 35  HQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEEL-YRSGTRTPTTEQIQQIAS 94

Query: 63  RLRQYGKIEGKNVFYWFQNHKARERQKKR 92
           +LR+YG+IEGKNVFYWFQNHKARER K+R
Sbjct: 95  KLRKYGRIEGKNVFYWFQNHKARERLKRR 122

[Close]

BLAST of Cp4.1LG19g08960 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-18
Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 26  SSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKAR 85
           +STRW PT +Q+ IL+E+ Y +G+R+P+A QIQ+I+A L  YG+IEGKNVFYWFQNHKAR
Sbjct: 5   ASTRWCPTPEQLMILEEM-YRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 64

Query: 86  ERQKKRFTSSASDHLHHHQQQQQIPVPKQQQQQQQQLQSSLIS 129
           +RQK R     +  LH  Q Q Q+    Q QQ + +  SS+IS
Sbjct: 65  DRQKLR--KKLAKQLHQQQHQLQL----QLQQIKPKPISSMIS 100

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g08960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LL11	6.4e-50	47.42	Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1	[more]
Q84VT7	1.8e-44	41.92	Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1	[more]
Q6YBV1	4.9e-42	46.88	Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1	[more]
Q9SB92	2.4e-33	40.96	Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2	[more]
Q7XM13	2.2e-26	34.33	WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1...	[more]

BLAST of Cp4.1LG19g08960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518147.1	7.26e-187	92.91	protein WUSCHEL [Cucurbita pepo subsp. pepo]	[more]
KAG7026743.1	5.30e-184	92.23	Protein WUSCHEL, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022926877.1	3.07e-183	91.89	protein WUSCHEL-like [Cucurbita moschata] >KAG6594778.1 Protein WUSCHEL, partial...	[more]
XP_023003921.1	6.90e-177	89.53	protein WUSCHEL [Cucurbita maxima]	[more]
XP_038883674.1	2.23e-127	70.07	protein WUSCHEL isoform X2 [Benincasa hispida]	[more]

BLAST of Cp4.1LG19g08960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFK3	1.48e-183	91.89	protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111433860 PE=3 SV=1	[more]
A0A6J1KQL8	3.34e-177	89.53	protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1	[more]
A0A0A0KH83	2.28e-115	68.56	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505860 PE...	[more]
A0A5A7SHQ2	6.28e-115	66.23	Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0013...	[more]
A0A6J1GEJ9	1.24e-113	67.65	protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111453464 PE=3 SV=1	[more]

BLAST of Cp4.1LG19g08960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17950.1	1.7e-34	40.96	Homeodomain-like superfamily protein	[more]
AT3G18010.1	1.5e-22	73.85	WUSCHEL related homeobox 1	[more]
AT5G59340.1	4.9e-21	69.70	WUSCHEL related homeobox 2	[more]
AT2G01500.1	3.5e-19	50.56	Homeodomain-like superfamily protein	[more]
AT2G28610.1	5.0e-18	53.40	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 25..93 e-value: 1.5E-5 score: 34.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 28..88 e-value: 9.8E-18 score: 63.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 23..89 score: 10.414001
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 28..90 e-value: 1.40583E-7 score: 45.6973
None	No IPR available	GENE3D	1.10.10.60		coord: 27..94 e-value: 6.2E-9 score: 37.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..168
None	No IPR available	PANTHER	PTHR45940:SF2	PROTEIN WUSCHEL	coord: 1..268
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 1..268
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 14..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g08960.1	Cp4.1LG19g08960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity