Cp4.1LG19g08670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCAAAGAGTTTATGTTGTATATGGGGAGAAAATGTGGGTTGACCAAATAATTGTAGGGAGAGGAGAAGAAGTAGGAGGAAATCAAATAAACTCAGGTTTGTAATCACTGTGTTGCCCAAGTAGGACCAAATCACAAAGAGAAAAACACTACAACCGCTCTTGGCCAAGTGATCACTGTCTTTCCTTGTATCTCTCCAACATGTGGCTTATCAATTTCTTTAACCTATCATAAATCAATAGCTACCTATGTTCGATCATCATACTCAACTTGCTATCGTTCTCTTTTCACTTGTGATACTCGTACGATAAGAACAAGAACAAGAACAAGAACAAGAACAAGATGAAGAAGATGCATCACATACCAGCTAAAAGCAATCTCGTTGATTCAAGTCCTGAAACTGACCATAATGCCCCCCCTCTTTGCCCTAAGCCCCGCCGCCTCCGTCCCGCCATCCCTAGTTTCCTCGCCCCGTTTCGATGCGCCCATCGCATTCATAGGTCATTCTCGATAAAATTTTATGTTCTGACTTTATATGTTGATATTCTTCAAGCGTATGTATGGCTTAATTTACTCTTGTCTTTCACCAGCCAATCTAGTAGTGATCCGAGAAGTGCAATCCTCAATATCATTGCGGGAAAGGTAAGGAAGTTGATTTCTCGGTTTCTCGATTCCTCGATTCCCTGATTTGTGAATGAGTTATGAGAAAACTATGAATGTTTGTGTTTGTAGGGTGTTGAAGGGAGAGATTGTTTGTGCTTGAATTGTTACCCGTCGTGTTATTCGGGATCTCCGCCAGGAAGAACAGGGAATCCGCTGGTTCAAGACGTGTATTTTCTTCATCAAGTGGAGATTCAATCGCCATTTTCGAGAACCTAAGCTCTCTTAGAAGTTCAGTTTGACCTCTGTTTCCCCCCACGTGAACGAAAGAACAAAGACGTCATTGAAGAAGTGAACAGGGATATACTGGTTGTTGTTTTATGTAGCTTTGTTAGTGAGTTTACTTACTTGTACAATCTTGATTTTCTTCAATTGTGCATCTTCGT ATCCAAAGAGTTTATGTTGTATATGGGGAGAAAATGTGGGTTGACCAAATAATTGTAGGGAGAGGAGAAGAAGTAGGAGGAAATCAAATAAACTCAGGTTTGTAATCACTGTGTTGCCCAAGTAGGACCAAATCACAAAGAGAAAAACACTACAACCGCTCTTGGCCAAGTGATCACTGTCTTTCCTTGTATCTCTCCAACATGTGGCTTATCAATTTCTTTAACCTATCATAAATCAATAGCTACCTATGTTCGATCATCATACTCAACTTGCTATCGTTCTCTTTTCACTTGTGATACTCGTACGATAAGAACAAGAACAAGAACAAGAACAAGAACAAGATGAAGAAGATGCATCACATACCAGCTAAAAGCAATCTCGTTGATTCAAGTCCTGAAACTGACCATAATGCCCCCCCTCTTTGCCCTAAGCCCCGCCGCCTCCGTCCCGCCATCCCTAGTTTCCTCGCCCCGTTTCGATGCGCCCATCGCATTCATAGCCAATCTAGTAGTGATCCGAGAAGTGCAATCCTCAATATCATTGCGGGAAAGGGTGTTGAAGGGAGAGATTGTTTGTGCTTGAATTGTTACCCGTCGTGTTATTCGGGATCTCCGCCAGGAAGAACAGGGAATCCGCTGGTTCAAGACGTGTATTTTCTTCATCAAGTGGAGATTCAATCGCCATTTTCGAGAACCTAAGCTCTCTTAGAAGTTCAGTTTGACCTCTGTTTCCCCCCACGTGAACGAAAGAACAAAGACGTCATTGAAGAAGTGAACAGGGATATACTGGTTGTTGTTTTATGTAGCTTTGTTAGTGAGTTTACTTACTTGTACAATCTTGATTTTCTTCAATTGTGCATCTTCGT ATGAAGAAGATGCATCACATACCAGCTAAAAGCAATCTCGTTGATTCAAGTCCTGAAACTGACCATAATGCCCCCCCTCTTTGCCCTAAGCCCCGCCGCCTCCGTCCCGCCATCCCTAGTTTCCTCGCCCCGTTTCGATGCGCCCATCGCATTCATAGCCAATCTAGTAGTGATCCGAGAAGTGCAATCCTCAATATCATTGCGGGAAAGGGTGTTGAAGGGAGAGATTGTTTGTGCTTGAATTGTTACCCGTCGTGTTATTCGGGATCTCCGCCAGGAAGAACAGGGAATCCGCTGGTTCAAGACGTGTATTTTCTTCATCAAGTGGAGATTCAATCGCCATTTTCGAGAACCTAA MKKMHHIPAKSNLVDSSPETDHNAPPLCPKPRRLRPAIPSFLAPFRCAHRIHSQSSSDPRSAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLVQDVYFLHQVEIQSPFSRT Homology
BLAST of Cp4.1LG19g08670 vs. NCBI nr
Match: XP_023518149.1 (uncharacterized protein LOC111781694 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 252 bits (643), Expect = 1.37e-84 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. NCBI nr
Match: KAG6594753.1 (hypothetical protein SDJN03_11306, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 247 bits (630), Expect = 1.32e-82 Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. NCBI nr
Match: KAG7026720.1 (hypothetical protein SDJN02_10724, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 246 bits (628), Expect = 2.66e-82 Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. NCBI nr
Match: XP_038881848.1 (uncharacterized protein LOC120073212 [Benincasa hispida]) HSP 1 Score: 188 bits (477), Expect = 2.23e-58 Identity = 91/123 (73.98%), Postives = 98/123 (79.67%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. NCBI nr
Match: XP_022133306.1 (uncharacterized protein LOC111005918 [Momordica charantia]) HSP 1 Score: 181 bits (459), Expect = 2.56e-56 Identity = 87/115 (75.65%), Postives = 94/115 (81.74%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. ExPASy TrEMBL
Match: A0A6J1BUP6 (uncharacterized protein LOC111005918 OS=Momordica charantia OX=3673 GN=LOC111005918 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 1.24e-56 Identity = 87/115 (75.65%), Postives = 94/115 (81.74%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. ExPASy TrEMBL
Match: A0A0A0KHD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507270 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 1.32e-56 Identity = 90/121 (74.38%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. ExPASy TrEMBL
Match: A0A5D3CKV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00940 PE=4 SV=1) HSP 1 Score: 178 bits (452), Expect = 1.54e-55 Identity = 87/121 (71.90%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. ExPASy TrEMBL
Match: A0A6P5YNC3 (uncharacterized protein LOC111293295 OS=Durio zibethinus OX=66656 GN=LOC111293295 PE=4 SV=1) HSP 1 Score: 146 bits (368), Expect = 3.68e-42 Identity = 70/120 (58.33%), Postives = 86/120 (71.67%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. ExPASy TrEMBL
Match: A0A1R3ILH6 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_22487 PE=4 SV=1) HSP 1 Score: 144 bits (363), Expect = 5.26e-42 Identity = 68/122 (55.74%), Postives = 84/122 (68.85%), Query Frame = 0
BLAST of Cp4.1LG19g08670 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 3.8e-07 Identity = 42/128 (32.81%), Postives = 59/128 (46.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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