Cp4.1LG19g07610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGTGAAAGAACGTGAGATAGAAATTGGGTACCCGATGGATGTGAAGCATGTATCTCATATCGGGTTGGATAGTACGTCTCCATCCGGTTCGAATCCGAGCTGGGTATGTTTTTTCTCTCTTCAAAACCTTTTTAAATTTGGTGTTTTGTTTATTCTTGTTGTTTGAAAAAACGCAGATGAATGAATTTAGAACCGGCGATGTGAGTGAGAGAAGAGATTCCAGTTCAACCGCCATAACTGCTCTCACTCATTGGTCCACTCATTCCCAAGGTCTGTTCTCAATCTAATTTTTCACATAATCCCAGATAATGGGAATATCAAATTTAACAAGCATTTCTACGTTGGATCTGCTGTGAAGCAGAATTCGATGTTTCAATAGGTTACCAATCGGCATCCGACATGTCGATGGAGCTTCAGCAGCCACAACTTCCAAAGAAACCAAAGAAAAAAAGGAATTGCAAGAACAACAAAGTCAAAAGCTTCCTGCAATAA ATGATAATAGAAATTGGGTACCCGATGGATGTGAAGCATGTATCTCATATCGGGTTGGATAGTACGTCTCCATCCGGTTCGAATCCGAGCTGGATGAATGAATTTAGAACCGGCGATGTGAGTGAGAGAAGAGATTCCAGTTCAACCGCCATAACTGCTCTCACTCATTGGTCCACTCATTCCCAAGAATTCGATGTTTCAATAGGTTACCAATCGGCATCCGACATGTCGATGGAGCTTCAGCAGCCACAACTTCCAAAGAAACCAAAGAAAAAAAGGAATTGCAAGAACAACAAAGTCAAAAGCTTCCTGCAATAA ATGATAATAGAAATTGGGTACCCGATGGATGTGAAGCATGTATCTCATATCGGGTTGGATAGTACGTCTCCATCCGGTTCGAATCCGAGCTGGATGAATGAATTTAGAACCGGCGATGTGAGTGAGAGAAGAGATTCCAGTTCAACCGCCATAACTGCTCTCACTCATTGGTCCACTCATTCCCAAGAATTCGATGTTTCAATAGGTTACCAATCGGCATCCGACATGTCGATGGAGCTTCAGCAGCCACAACTTCCAAAGAAACCAAAGAAAAAAAGGAATTGCAAGAACAACAAAGTCAAAAGCTTCCTGCAATAA MIIEIGYPMDVKHVSHIGLDSTSPSGSNPSWMNEFRTGDVSERRDSSSTAITALTHWSTHSQEFDVSIGYQSASDMSMELQQPQLPKKPKKKRNCKNNKVKSFLQ Homology
BLAST of Cp4.1LG19g07610 vs. ExPASy Swiss-Prot
Match: Q1G3Y0 (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana OX=3702 GN=RIC9 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 6.3e-06 Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.2e-06 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.3e-05 Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.5e-04 Identity = 35/99 (35.35%), Postives = 49/99 (49.49%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. ExPASy Swiss-Prot
Match: Q0WL69 (CRIB domain-containing protein RIC11 OS=Arabidopsis thaliana OX=3702 GN=RIC11 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.9e-04 Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. NCBI nr
Match: XP_022926406.1 (CRIB domain-containing protein RIC10-like [Cucurbita moschata]) HSP 1 Score: 203 bits (516), Expect = 1.51e-65 Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. NCBI nr
Match: XP_023003960.1 (CRIB domain-containing protein RIC10-like [Cucurbita maxima]) HSP 1 Score: 199 bits (507), Expect = 3.57e-64 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. NCBI nr
Match: XP_023518156.1 (CRIB domain-containing protein RIC10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 195 bits (495), Expect = 1.74e-61 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. NCBI nr
Match: KAG7026620.1 (hypothetical protein SDJN02_10622, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196 bits (498), Expect = 6.22e-57 Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. NCBI nr
Match: KAG6594652.1 (hypothetical protein SDJN03_11205, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 186 bits (473), Expect = 1.02e-52 Identity = 95/103 (92.23%), Postives = 96/103 (93.20%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. ExPASy TrEMBL
Match: A0A6J1EEU3 (CRIB domain-containing protein RIC10-like OS=Cucurbita moschata OX=3662 GN=LOC111433570 PE=4 SV=1) HSP 1 Score: 203 bits (516), Expect = 7.32e-66 Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. ExPASy TrEMBL
Match: A0A6J1KT87 (CRIB domain-containing protein RIC10-like OS=Cucurbita maxima OX=3661 GN=LOC111497406 PE=4 SV=1) HSP 1 Score: 199 bits (507), Expect = 1.73e-64 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. ExPASy TrEMBL
Match: A0A6J1IMV0 (CRIB domain-containing protein RIC10-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478834 PE=4 SV=1) HSP 1 Score: 154 bits (388), Expect = 4.92e-46 Identity = 73/95 (76.84%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. ExPASy TrEMBL
Match: A0A5D3CMM6 (CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006630 PE=4 SV=1) HSP 1 Score: 149 bits (377), Expect = 3.17e-44 Identity = 74/100 (74.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. ExPASy TrEMBL
Match: A0A1S3B0N0 (CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484596 PE=4 SV=1) HSP 1 Score: 149 bits (377), Expect = 3.17e-44 Identity = 74/100 (74.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. TAIR 10
Match: AT1G61795.1 (PAK-box/P21-Rho-binding family protein ) HSP 1 Score: 51.6 bits (122), Expect = 4.4e-07 Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. TAIR 10
Match: AT4G04900.1 (ROP-interactive CRIB motif-containing protein 10 ) HSP 1 Score: 51.2 bits (121), Expect = 5.8e-07 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. TAIR 10
Match: AT2G33460.1 (ROP-interactive CRIB motif-containing protein 1 ) HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06 Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. TAIR 10
Match: AT4G28556.1 (PAK-box/P21-Rho-binding family protein ) HSP 1 Score: 45.4 bits (106), Expect = 3.2e-05 Identity = 35/99 (35.35%), Postives = 49/99 (49.49%), Query Frame = 0
BLAST of Cp4.1LG19g07610 vs. TAIR 10
Match: AT4G21745.1 (PAK-box/P21-Rho-binding family protein ) HSP 1 Score: 45.1 bits (105), Expect = 4.2e-05 Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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