Cp4.1LG19g06650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g06650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Dof zinc finger protein
Location	Cp4.1LG19: 7305124 .. 7305633 (-)
RNA-Seq Expression	Cp4.1LG19g06650
Synteny	Cp4.1LG19g06650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGGTTCACTGTAGCAACACTGGTGGAATTAAGCTCTTTGGCACCGTCATCAATTTACAGACCAGAAGCATCAAGGAGGAGCCGGAGAAGGGTGGTGGGGGTGGCGATCAACCAGAGATGAAGAGGCCGGAGAAAATAATTCCATGTCCTAGATGTAAGAGCATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCAGGTGGGGCGCTACGGAACGTGCCCATCGGAGCCGGCCGCCGGAGAGCCAAGCCGCCGCTGCCGAATTGTCGAATCCTTTCCGGAGAGCTTCCCGAGGATTATGGGCAGCTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGATGCGGTGGAGGGGTGGCATTTCACGGTGGCGGAACAGGATTTCGCCCAAGTTTTTCCTCTCAAACGCCAGAAGATTATCGGTCAACACGGTCAAACGTCTTGA

mRNA sequence

ATGGCTGAGGTTCACTGTAGCAACACTGGTGGAATTAAGCTCTTTGGCACCGTCATCAATTTACAGACCAGAAGCATCAAGGAGGAGCCGGAGAAGGGTGGTGGGGGTGGCGATCAACCAGAGATGAAGAGGCCGGAGAAAATAATTCCATGTCCTAGATGTAAGAGCATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCAGGTGGGGCGCTACGGAACGTGCCCATCGGAGCCGGCCGCCGGAGAGCCAAGCCGCCGCTGCCGAATTGTCGAATCCTTTCCGGAGAGCTTCCCGAGGATTATGGGCAGCTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGATGCGGTGGAGGGGTGGCATTTCACGGTGGCGGAACAGGATTTCGCCCAAGTTTTTCCTCTCAAACGCCAGAAGATTATCGGTCAACACGGTCAAACGTCTTGA

Coding sequence (CDS)

ATGGCTGAGGTTCACTGTAGCAACACTGGTGGAATTAAGCTCTTTGGCACCGTCATCAATTTACAGACCAGAAGCATCAAGGAGGAGCCGGAGAAGGGTGGTGGGGGTGGCGATCAACCAGAGATGAAGAGGCCGGAGAAAATAATTCCATGTCCTAGATGTAAGAGCATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCAGGTGGGGCGCTACGGAACGTGCCCATCGGAGCCGGCCGCCGGAGAGCCAAGCCGCCGCTGCCGAATTGTCGAATCCTTTCCGGAGAGCTTCCCGAGGATTATGGGCAGCTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGATGCGGTGGAGGGGTGGCATTTCACGGTGGCGGAACAGGATTTCGCCCAAGTTTTTCCTCTCAAACGCCAGAAGATTATCGGTCAACACGGTCAAACGTCTTGA

Protein sequence

MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGGDQPEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYGQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS

Homology

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-39
Identity = 90/170 (52.94%), Postives = 109/170 (64.12%), Query Frame = 0


Query: 11  GIKLFGTVINLQ---TRSIKEEPEKGGGGGDQPEM----------------KRPEKIIPC 70
           GIKLFG  I      T++IK+E ++      QPE+                KRP+KIIPC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQ---QQQQPELQATTAVRSPSSDLTAEKRPDKIIPC 67

Query: 71  PRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRIL 130
           PRCKSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRR++KPP       
Sbjct: 68  PRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPP------- 127

Query: 131 SGELPEDYGQLYDAASGIIHQLELDA--VEGWH-FTVAEQDFAQVFPLKR 159
            G +   + +L  AA+G + Q+ELDA  VE W   T +   F   FP+KR
Sbjct: 128 -GRV-GGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKR 165

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.9e-37
Identity = 85/165 (51.52%), Postives = 98/165 (59.39%), Query Frame = 0


Query: 11  GIKLFGTVINLQTRSIKEEPE------------KGGGGGDQPEMKRPEKIIPCPRCKSMD 70
           GIKLFG  I   TR+IK E E            +     D    KRP+KII CPRCKSM+
Sbjct: 8   GIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSME 67

Query: 71  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 130
           TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRR++KPP    R++ G L + 
Sbjct: 68  TKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPP---GRVVVGMLGDG 127

Query: 131 YGQLYDAASGIIHQLELD---AVEGWHF--TVAEQDFAQVFPLKR 159
            G         + Q+EL     VE W      A   F   FP+KR
Sbjct: 128 NG---------VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKR 160

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 2.2e-29
Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 23  TRSIKEEPEKGGGGGDQP-EMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQR 82
           T++ K   E GG    Q  ++K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQR
Sbjct: 111 TKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQR 170

Query: 83  YWTAGGALRNVPIGAGRRRAKPP 105
           YWTAGG +RNVP+GAGRR+ K P
Sbjct: 171 YWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-28
Identity = 63/125 (50.40%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 12  IKLFGTVIN----LQTRSIKEEPEKGGGGGDQPE----MKRPEKIIPCPRCKSMDTKFCY 71
           IKLFG  I     L+    +EE  +     DQ E    +K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 72  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYGQLY 129
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRR+ K   P        + E  G + 
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISETNGPVL 128

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-27
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 38  DQPEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAG 97
           D   +K+P KI+PCPRCKSM+TKFCY+NNYN+NQPRHFCK CQRYWTAGG +RNVP+GAG
Sbjct: 99  DGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 158

Query: 98  RRRAK 103
           RR+ K
Sbjct: 159 RRKNK 163

[Close]

BLAST of Cp4.1LG19g06650 vs. NCBI nr
Match: XP_023517358.1 (dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367 bits (941), Expect = 2.23e-128
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGGDQPEMKRPEKIIPCPRCKSMDTK 60
           MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGGDQPEMKRPEKIIPCPRCKSMDTK
Sbjct: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGGDQPEMKRPEKIIPCPRCKSMDTK 60

Query: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYG 120
           FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYG
Sbjct: 61  FCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYG 120

Query: 121 QLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           QLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 121 QLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169

[Close]

BLAST of Cp4.1LG19g06650 vs. NCBI nr
Match: XP_022926650.1 (dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita moschata] >KAG6594548.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026525.1 Dof zinc finger protein DOF1.5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357 bits (916), Expect = 1.56e-124
Identity = 167/171 (97.66%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGG--GGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSNTGGIKLFGTVI LQTRSIKEEPEKGG  GGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120

Query: 121 YGQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           YGQLYDAASGIIHQLELDAVEGWH TVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 171

[Close]

BLAST of Cp4.1LG19g06650 vs. NCBI nr
Match: XP_022926649.1 (dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 357 bits (916), Expect = 9.46e-124
Identity = 167/171 (97.66%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGG--GGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSNTGGIKLFGTVI LQTRSIKEEPEKGG  GGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 52  MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 111

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 112 TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 171

Query: 121 YGQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           YGQLYDAASGIIHQLELDAVEGWH TVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 172 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 222

[Close]

BLAST of Cp4.1LG19g06650 vs. NCBI nr
Match: XP_023003300.1 (dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 347 bits (889), Expect = 1.84e-120
Identity = 164/170 (96.47%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGG-DQPEMKRPEKIIPCPRCKSMDT 60
           MAEVHCSN GGIKLFGTVI LQTRSIKEEPEKGGGGG DQPEMKRPEKIIPCPRCKSMDT
Sbjct: 1   MAEVHCSNAGGIKLFGTVITLQTRSIKEEPEKGGGGGGDQPEMKRPEKIIPCPRCKSMDT 60

Query: 61  KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY 120
           KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY
Sbjct: 61  KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY 120

Query: 121 GQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           GQLYDAASGIIHQLELDAVEGWH TVAEQDFAQVFPLKRQKI  QHGQTS
Sbjct: 121 GQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI--QHGQTS 168

[Close]

BLAST of Cp4.1LG19g06650 vs. NCBI nr
Match: XP_023003299.1 (dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 347 bits (889), Expect = 1.28e-119
Identity = 164/170 (96.47%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGG-DQPEMKRPEKIIPCPRCKSMDT 60
           MAEVHCSN GGIKLFGTVI LQTRSIKEEPEKGGGGG DQPEMKRPEKIIPCPRCKSMDT
Sbjct: 56  MAEVHCSNAGGIKLFGTVITLQTRSIKEEPEKGGGGGGDQPEMKRPEKIIPCPRCKSMDT 115

Query: 61  KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY 120
           KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY
Sbjct: 116 KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY 175

Query: 121 GQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           GQLYDAASGIIHQLELDAVEGWH TVAEQDFAQVFPLKRQKI  QHGQTS
Sbjct: 176 GQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI--QHGQTS 223

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy TrEMBL
Match: A0A6J1ELQ8 (dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433719 PE=4 SV=1)

HSP 1 Score: 357 bits (916), Expect = 7.56e-125
Identity = 167/171 (97.66%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGG--GGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSNTGGIKLFGTVI LQTRSIKEEPEKGG  GGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120

Query: 121 YGQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           YGQLYDAASGIIHQLELDAVEGWH TVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 171

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy TrEMBL
Match: A0A6J1EFS0 (dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433719 PE=4 SV=1)

HSP 1 Score: 357 bits (916), Expect = 4.58e-124
Identity = 167/171 (97.66%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGG--GGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSNTGGIKLFGTVI LQTRSIKEEPEKGG  GGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 52  MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 111

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 112 TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 171

Query: 121 YGQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           YGQLYDAASGIIHQLELDAVEGWH TVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 172 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 222

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy TrEMBL
Match: A0A6J1KRE2 (dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496951 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 8.93e-121
Identity = 164/170 (96.47%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGG-DQPEMKRPEKIIPCPRCKSMDT 60
           MAEVHCSN GGIKLFGTVI LQTRSIKEEPEKGGGGG DQPEMKRPEKIIPCPRCKSMDT
Sbjct: 1   MAEVHCSNAGGIKLFGTVITLQTRSIKEEPEKGGGGGGDQPEMKRPEKIIPCPRCKSMDT 60

Query: 61  KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY 120
           KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY
Sbjct: 61  KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY 120

Query: 121 GQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           GQLYDAASGIIHQLELDAVEGWH TVAEQDFAQVFPLKRQKI  QHGQTS
Sbjct: 121 GQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI--QHGQTS 168

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy TrEMBL
Match: A0A6J1KSX6 (dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496951 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 6.19e-120
Identity = 164/170 (96.47%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGG-DQPEMKRPEKIIPCPRCKSMDT 60
           MAEVHCSN GGIKLFGTVI LQTRSIKEEPEKGGGGG DQPEMKRPEKIIPCPRCKSMDT
Sbjct: 56  MAEVHCSNAGGIKLFGTVITLQTRSIKEEPEKGGGGGGDQPEMKRPEKIIPCPRCKSMDT 115

Query: 61  KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY 120
           KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY
Sbjct: 116 KFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDY 175

Query: 121 GQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           GQLYDAASGIIHQLELDAVEGWH TVAEQDFAQVFPLKRQKI  QHGQTS
Sbjct: 176 GQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI--QHGQTS 223

[Close]

BLAST of Cp4.1LG19g06650 vs. ExPASy TrEMBL
Match: A0A6J1ILZ6 (dof zinc finger protein DOF1.5-like OS=Cucurbita maxima OX=3661 GN=LOC111478624 PE=4 SV=1)

HSP 1 Score: 323 bits (827), Expect = 1.56e-110
Identity = 151/174 (86.78%), Postives = 159/174 (91.38%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKGGGGG-----DQPEMKRPEKIIPCPRCK 60
           MA+VH S TGGIKLFGT+I LQTR +K++PEKGGGGG     DQ EMKRPEKIIPCPRCK
Sbjct: 48  MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 107

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGEL 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP PNCR LSGE+
Sbjct: 108 SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP-PNCRTLSGEM 167

Query: 121 PEDYGQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169
           P+DYGQLYDAASGIIHQLELDAVEGWH  VAEQDF QVFPLKRQKIIGQ+GQTS
Sbjct: 168 PDDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 220

[Close]

BLAST of Cp4.1LG19g06650 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-40
Identity = 90/170 (52.94%), Postives = 109/170 (64.12%), Query Frame = 0


Query: 11  GIKLFGTVINLQ---TRSIKEEPEKGGGGGDQPEM----------------KRPEKIIPC 70
           GIKLFG  I      T++IK+E ++      QPE+                KRP+KIIPC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQ---QQQQPELQATTAVRSPSSDLTAEKRPDKIIPC 67

Query: 71  PRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRIL 130
           PRCKSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRR++KPP       
Sbjct: 68  PRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPP------- 127

Query: 131 SGELPEDYGQLYDAASGIIHQLELDA--VEGWH-FTVAEQDFAQVFPLKR 159
            G +   + +L  AA+G + Q+ELDA  VE W   T +   F   FP+KR
Sbjct: 128 -GRV-GGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKR 165

[Close]

BLAST of Cp4.1LG19g06650 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-38
Identity = 85/165 (51.52%), Postives = 98/165 (59.39%), Query Frame = 0


Query: 11  GIKLFGTVINLQTRSIKEEPE------------KGGGGGDQPEMKRPEKIIPCPRCKSMD 70
           GIKLFG  I   TR+IK E E            +     D    KRP+KII CPRCKSM+
Sbjct: 8   GIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSME 67

Query: 71  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 130
           TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRR++KPP    R++ G L + 
Sbjct: 68  TKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPP---GRVVVGMLGDG 127

Query: 131 YGQLYDAASGIIHQLELD---AVEGWHF--TVAEQDFAQVFPLKR 159
            G         + Q+EL     VE W      A   F   FP+KR
Sbjct: 128 NG---------VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKR 160

[Close]

BLAST of Cp4.1LG19g06650 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-30
Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 23  TRSIKEEPEKGGGGGDQP-EMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQR 82
           T++ K   E GG    Q  ++K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQR
Sbjct: 111 TKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQR 170

Query: 83  YWTAGGALRNVPIGAGRRRAKPP 105
           YWTAGG +RNVP+GAGRR+ K P
Sbjct: 171 YWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of Cp4.1LG19g06650 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-30
Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 23  TRSIKEEPEKGGGGGDQP-EMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQR 82
           T++ K   E GG    Q  ++K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQR
Sbjct: 111 TKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQR 170

Query: 83  YWTAGGALRNVPIGAGRRRAKPP 105
           YWTAGG +RNVP+GAGRR+ K P
Sbjct: 171 YWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of Cp4.1LG19g06650 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-29
Identity = 63/125 (50.40%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 12  IKLFGTVIN----LQTRSIKEEPEKGGGGGDQPE----MKRPEKIIPCPRCKSMDTKFCY 71
           IKLFG  I     L+    +EE  +     DQ E    +K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 72  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYGQLY 129
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRR+ K   P        + E  G + 
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISETNGPVL 128

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g06650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	1.8e-39	52.94	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	2.9e-37	51.52	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q93ZL5	2.2e-29	66.27	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8W1E3	3.2e-28	50.40	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q8LFV3	1.2e-27	75.38	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of Cp4.1LG19g06650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517358.1	2.23e-128	100.00	dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926650.1	1.56e-124	97.66	dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita moschata] >KAG6594548....	[more]
XP_022926649.1	9.46e-124	97.66	dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita moschata]	[more]
XP_023003300.1	1.84e-120	96.47	dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita maxima]	[more]
XP_023003299.1	1.28e-119	96.47	dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG19g06650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ELQ8	7.56e-125	97.66	dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1EFS0	4.58e-124	97.66	dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KRE2	8.93e-121	96.47	dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1KSX6	6.19e-120	96.47	dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1ILZ6	1.56e-110	86.78	dof zinc finger protein DOF1.5-like OS=Cucurbita maxima OX=3661 GN=LOC111478624 ...	[more]

BLAST of Cp4.1LG19g06650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	1.3e-40	52.94	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	2.1e-38	51.52	Dof-type zinc finger DNA-binding family protein	[more]
AT5G39660.1	1.6e-30	66.27	cycling DOF factor 2	[more]
AT5G39660.2	1.6e-30	66.27	cycling DOF factor 2	[more]
AT5G62430.1	2.3e-29	50.40	cycling DOF factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 47..102 e-value: 1.1E-31 score: 108.7
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 51..87
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 49..103 score: 28.238934
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..45
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 8..162
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 8..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g06650.1	Cp4.1LG19g06650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity