Cp4.1LG19g06380 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g06380
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG19: 7474105 .. 7477220 (+)
RNA-Seq ExpressionCp4.1LG19g06380
SyntenyCp4.1LG19g06380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCAAAGGAATGTCATTTCTTGGACGACCATAATCGATGGGCTGCTGGAGTTTGGGAGAGTTGAGGTTGCTGAGCGCTTTTTCTGGGAGATGCCCACTAGGGATGTTGCTGCCTGGAATTCCATGGTTCATGGATATTTTAGTAATGGTAGAGTTGAAGATGCCGTTGAGTTGTTTGAGAAAATGCCTTTCCGGAATGTGATTTCGTGGACTTCTGTGATTGGTGGGCTTGACCAGAATGGAAGGAGTTACGAAGCTCTACTTGTTTTCCAGAAAATGTTGGCTTCCTTTATCAAACCCACTTCGAGCACGTTGGCCTGTGCATTGACAGCTTGTGCAAACATACGTACTTTCTTCATAGGTGTACAGATTCATGGTCTAATTGTTAAGACTGGTCACTGCTTTGATGAATACATAGCTGCTTCCCTTATAACATTTTATGCAAACTGCAAGCTAATACAGAATGCTTTCGACATTTTTAACGACGATTTACGGAGAAATGTTGCGGTTTGGACGGCTCTTCTAACGGGATATGGATTGAACTGTAAGCACGACGATGCGTTACGGGTTTTCAAGGGTATGATGAGAATGTGTGTGCTTCCTAATCAATCTTCTCTGACTAGTGCTCTAAATTCATGTTGTGGATTAGAGGCTGTTGATAGAGGCAGGGAAGTTCATAGTGTAGCTTACAAGCTAGGCTTGGAAAATGATATCTTTGTCGGTAATTCTCTCGTGGTTATGTATACTAAATGTGGACAAATTCGTGATGGGGTTGTTGTCTTCACAGGAATGTCTAGAAAGAATGTTGTGTCCTGGAACTCCATCATTGTTGGATGTGCACAACATGGTTTTGGGATGTGGGCTTTGACTCTCTTCGCTCAAATGATTCGTTCAAGGGTGGATCCAGACGAGATTACGCTCATAGGATTACTTTCAGCTTGCAGCCATTCTGGATTGTTAACAAAAGGTAGAAGCTTTTTCAAGCATTTTGGCAAAAACTTGTGTATTGAGATGACAAATGAGCACTATGCTTCTATGGTTGATCTATTAGGCCGATATGGCGAATTGGACGAAGCCGAAGCGCTGATTCATACCATGCCTATCAAAGCTAACTACACGGTGTGGCTTGCACTGCTCAGCAGTTGCTCCAAACACTCTAATGTGGATGTAGCTGAAAGGGCAGCAAAATGTGTGTTGGAACTACAACCAAGCTGTAGTGCTGCTTATACATTACTCTCCAATCTATACGCTTCTAATGGAAAATGGACTGAAGTTTCCAAAATAAGGAAGAAGATGAAAGATGAAGGGATTTTAAAGCAACCTGGAAGTAGCTGGATTACAGTTAAGGGGATCAGGCATGATTTTCTTTCGGGCGATCGGTCGCATCCATCGAGCCGAAAAATATACCAAAAACTAGAATGGCTAAGAGGGAAGTTGAAGGAATTGGGTTATGTACCTGATCCGAAGTTCTCCTTGCATGATGTTGAGTCAGAACAAAAGGAAGAGATGCTGTCAAGTCATAGTGAGAGGCTTGCTATTGGGTTTGGATTAATCAGTACAGTTGAGGGTAGCACCATAACAGTAATGAAAAACCTCCGCATTTGTGGCGATTGTCACAATGCCATCAAGCTTATAGCGAAAGTCGTCGGTCGGGAAATCGTCGTTAGAGACTCTAGCCGCTTTCATCACTTTCGTAGCGGAGCCTGTTCTTGTGGAGATTACTGGTAGTAGCTGTGGTGGTTCAAAATGTGTTCAAATAATGGATTGAACTCCATGATACACCAAAAATCATGCCTACAGGAAGAGGAAAGAAACAATGTTAGCAGCTATAAACCAGTTTGAGAGTACATCTTCATGAAGAACAGGAAGCCAAATTAAACTACCAATATCAAGTTCCTGTGAGAATTTTGGAATTTTGGAATTTTGTGTAGCAAGGCGAGTGGCTAGGTCATGTTCGTTTAAATTCTTGGTTGAATCATACAAAACCCTAATTAACTTAAAGAGTATGTCTAATCACCACTTGGTTAGGTCAATCTCAAATTTTTGGGATAGAAAATATAATTTAATGAAAAAAATTAAGTTCAAATCCACTAACTAAAAAGTAAAATTTACCCGTAAAAATTTAGGCATGGTTTTTAAAGCCCTATATATAGTTGGGTAAGAGATGAATCTTCATGAACTTGATCCCTAGATGAATCTTGAAGATAGTTAGTGGAGATGAATCCAAAGAAGTGAACGGACTCAGAAAATTCAGTTCTGAATCAATTCTTGAGGTTGATTGTTCAAGCCACCATCGGCGATCTTCAATCTTGTACCAGGAAATTCGCAAGATGACGATTACAGAGAGAGAAGAAGACAGAGAAACAGTTACGAACGCGACAATTGAACAAATTAAGGAGAAAGAAGAAGAACAAGAAGAAGAAATTGACCAGACAAAGAAGGAAGAAGATGATGATGAAGAATTAAACCTGGATGCTATGCTGAGTGAGATTGTCAAAGATTCAGAATCAGGGAGTTCAATGAAAGAAATGGAAGAACATGAAGAACAAGTAAGTAAAAGAACAAGAATCGCAGAATCAGGGGAAGCGGAGGTAGCGGAGGAAGCGGAAACAGAACAACTTCGTATTGGATCCGATCCGGCAGTGGATCCTCTGGACATAACCATGGAAATCGTATCGAAATACCACGACTTCGTTGACTTCGCACTTGAGATTTTGGAAGAAGAACAGAAATACGAAGAAGAACAGAAATACGGAGAAGAACAGAAAATCGAAGAGGAAATGAAAACACAGTTATGGAGCGAGGTTTTTGAAAGAGGAAAGCAGCTGGTTGAGAGCCTGAAGCAAAGATTGCAGAGACTGCCTTACGAACTGAATCGCATGAAAAACGATAAGAATTTGCGGGAGAAATACACCACCAGAAAATTTTGTGTTCAACATATCTTACCTCAACTGCGACATTTAAATTCACGAGTCGATACATGTCCTCATATCCGCATTCTTTCAGACGATAACTCTACAGTGCGTGTGTTGCCATTGTACTTCGATGAGCTTCACGATTGCAAGATAGACCTGTTTGCGATGATGGAGCTAATCAGAGATCTGAAGGAATGA

mRNA sequence

ATGCCGCAAAGGAATGTCATTTCTTGGACGACCATAATCGATGGGCTGCTGGAGTTTGGGAGAGTTGAGGTTGCTGAGCGCTTTTTCTGGGAGATGCCCACTAGGGATGTTGCTGCCTGGAATTCCATGGTTCATGGATATTTTAGTAATGGTAGAGTTGAAGATGCCGTTGAGTTGTTTGAGAAAATGCCTTTCCGGAATGTGATTTCGTGGACTTCTGTGATTGGTGGGCTTGACCAGAATGGAAGGAGTTACGAAGCTCTACTTGTTTTCCAGAAAATGTTGGCTTCCTTTATCAAACCCACTTCGAGCACGTTGGCCTGTGCATTGACAGCTTGTGCAAACATACGTACTTTCTTCATAGGTGTACAGATTCATGGTCTAATTGTTAAGACTGGTCACTGCTTTGATGAATACATAGCTGCTTCCCTTATAACATTTTATGCAAACTGCAAGCTAATACAGAATGCTTTCGACATTTTTAACGACGATTTACGGAGAAATGTTGCGGTTTGGACGGCTCTTCTAACGGGATATGGATTGAACTGTAAGCACGACGATGCGTTACGGGTTTTCAAGGTTAGTGGAGATGAATCCAAAGAAGTGAACGGACTCAGAAAATTCAGTTCTGAATCAATTCTTGAGGTTGATTGTTCAAGCCACCATCGGCGATCTTCAATCTTGTACCAGGAAATTCGCAAGATGACGATTACAGAGAGAGAAGAAGACAGAGAAACAGTTACGAACGCGACAATTGAACAAATTAAGGAGAAAGAAGAAGAACAAGAAGAAGAAATTGACCAGACAAAGAAGGAAGAAGATGATGATGAAGAATTAAACCTGGATGCTATGCTGAGTGAGATTGTCAAAGATTCAGAATCAGGGAGTTCAATGAAAGAAATGGAAGAACATGAAGAACAAGTAAGTAAAAGAACAAGAATCGCAGAATCAGGGGAAGCGGAGGTAGCGGAGGAAGCGGAAACAGAACAACTTCGTATTGGATCCGATCCGGCAGTGGATCCTCTGGACATAACCATGGAAATCGTATCGAAATACCACGACTTCGTTGACTTCGCACTTGAGATTTTGGAAGAAGAACAGAAATACGAAGAAGAACAGAAATACGGAGAAGAACAGAAAATCGAAGAGGAAATGAAAACACAGTTATGGAGCGAGGTTTTTGAAAGAGGAAAGCAGCTGGTTGAGAGCCTGAAGCAAAGATTGCAGAGACTGCCTTACGAACTGAATCGCATGAAAAACGATAAGAATTTGCGGGAGAAATACACCACCAGAAAATTTTGTGTTCAACATATCTTACCTCAACTGCGACATTTAAATTCACGAGTCGATACATGTCCTCATATCCGCATTCTTTCAGACGATAACTCTACAGTGCGTGTGTTGCCATTGTACTTCGATGAGCTTCACGATTGCAAGATAGACCTGTTTGCGATGATGGAGCTAATCAGAGATCTGAAGGAATGA

Coding sequence (CDS)

ATGCCGCAAAGGAATGTCATTTCTTGGACGACCATAATCGATGGGCTGCTGGAGTTTGGGAGAGTTGAGGTTGCTGAGCGCTTTTTCTGGGAGATGCCCACTAGGGATGTTGCTGCCTGGAATTCCATGGTTCATGGATATTTTAGTAATGGTAGAGTTGAAGATGCCGTTGAGTTGTTTGAGAAAATGCCTTTCCGGAATGTGATTTCGTGGACTTCTGTGATTGGTGGGCTTGACCAGAATGGAAGGAGTTACGAAGCTCTACTTGTTTTCCAGAAAATGTTGGCTTCCTTTATCAAACCCACTTCGAGCACGTTGGCCTGTGCATTGACAGCTTGTGCAAACATACGTACTTTCTTCATAGGTGTACAGATTCATGGTCTAATTGTTAAGACTGGTCACTGCTTTGATGAATACATAGCTGCTTCCCTTATAACATTTTATGCAAACTGCAAGCTAATACAGAATGCTTTCGACATTTTTAACGACGATTTACGGAGAAATGTTGCGGTTTGGACGGCTCTTCTAACGGGATATGGATTGAACTGTAAGCACGACGATGCGTTACGGGTTTTCAAGGTTAGTGGAGATGAATCCAAAGAAGTGAACGGACTCAGAAAATTCAGTTCTGAATCAATTCTTGAGGTTGATTGTTCAAGCCACCATCGGCGATCTTCAATCTTGTACCAGGAAATTCGCAAGATGACGATTACAGAGAGAGAAGAAGACAGAGAAACAGTTACGAACGCGACAATTGAACAAATTAAGGAGAAAGAAGAAGAACAAGAAGAAGAAATTGACCAGACAAAGAAGGAAGAAGATGATGATGAAGAATTAAACCTGGATGCTATGCTGAGTGAGATTGTCAAAGATTCAGAATCAGGGAGTTCAATGAAAGAAATGGAAGAACATGAAGAACAAGTAAGTAAAAGAACAAGAATCGCAGAATCAGGGGAAGCGGAGGTAGCGGAGGAAGCGGAAACAGAACAACTTCGTATTGGATCCGATCCGGCAGTGGATCCTCTGGACATAACCATGGAAATCGTATCGAAATACCACGACTTCGTTGACTTCGCACTTGAGATTTTGGAAGAAGAACAGAAATACGAAGAAGAACAGAAATACGGAGAAGAACAGAAAATCGAAGAGGAAATGAAAACACAGTTATGGAGCGAGGTTTTTGAAAGAGGAAAGCAGCTGGTTGAGAGCCTGAAGCAAAGATTGCAGAGACTGCCTTACGAACTGAATCGCATGAAAAACGATAAGAATTTGCGGGAGAAATACACCACCAGAAAATTTTGTGTTCAACATATCTTACCTCAACTGCGACATTTAAATTCACGAGTCGATACATGTCCTCATATCCGCATTCTTTCAGACGATAACTCTACAGTGCGTGTGTTGCCATTGTACTTCGATGAGCTTCACGATTGCAAGATAGACCTGTTTGCGATGATGGAGCTAATCAGAGATCTGAAGGAATGA

Protein sequence

MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELFEKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYGLNCKHDDALRVFKVSGDESKEVNGLRKFSSESILEVDCSSHHRRSSILYQEIRKMTITEREEDRETVTNATIEQIKEKEEEQEEEIDQTKKEEDDDEELNLDAMLSEIVKDSESGSSMKEMEEHEEQVSKRTRIAESGEAEVAEEAETEQLRIGSDPAVDPLDITMEIVSKYHDFVDFALEILEEEQKYEEEQKYGEEQKIEEEMKTQLWSEVFERGKQLVESLKQRLQRLPYELNRMKNDKNLREKYTTRKFCVQHILPQLRHLNSRVDTCPHIRILSDDNSTVRVLPLYFDELHDCKIDLFAMMELIRDLKE
Homology
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BLAST of Cp4.1LG19g06380 vs. ExPASy Swiss-Prot
Match: Q9FHF9 (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H49 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-62
Identity = 112/221 (50.68%), Postives = 158/221 (71.49%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MP+R+V+SWT +++G    G+V+ AER F++MP +D AAWNSMVHGY   G+V+DA++LF
Sbjct: 123 MPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLF 182

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           ++MP +NVISWT++I GLDQN RS EAL +F+ ML   IK TS    C +TACAN   F 
Sbjct: 183 KQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFH 242

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           +G+Q+HGLI+K G  ++EY++ASLITFYANCK I ++  +F++ +   VAVWTALL+GY 
Sbjct: 243 MGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS 302

Query: 181 LNCKHDDALRVF------KVSGDESKEVNGLRKFSSESILE 216
           LN KH+DAL +F       +  ++S   +GL   S+   L+
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLD 343

[Close]
BLAST of Cp4.1LG19g06380 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 7.9e-35
Identity = 72/221 (32.58%), Postives = 126/221 (57.01%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MP+RN +SW  ++ G ++  R+E+A+  F  MP R+V+ WN+M+ GY   G++ +A  LF
Sbjct: 307 MPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLF 366

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           +KMP R+ +SW ++I G  Q+G S+EAL +F +M     +   S+ + AL+ CA++    
Sbjct: 367 DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE 426

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           +G Q+HG +VK G+    ++  +L+  Y  C  I+ A D+F +   +++  W  ++ GY 
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486

Query: 181 LNCKHDDALRVFKVSGDESKEVNGLRKFSSESILEVDCSSH 222
            +   + ALR F     ES +  GL+   +  +  +   SH
Sbjct: 487 RHGFGEVALRFF-----ESMKREGLKPDDATMVAVLSACSH 522

[Close]
BLAST of Cp4.1LG19g06380 vs. ExPASy Swiss-Prot
Match: O49399 (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E101 PE=3 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 7.0e-31
Identity = 70/206 (33.98%), Postives = 114/206 (55.34%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MP R+ +SW +++   LE G V+ A   F EM  R+V +WN M+ GY + G V++A E+F
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVF 260

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKML-ASFIKPTSSTLACALTACANIRTF 120
           + MP R+V+SW +++      G   E L VF KML  S  KP   TL   L+ACA++ + 
Sbjct: 261 DSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSL 320

Query: 121 FIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGY 180
             G  +H  I K G   + ++A +L+  Y+ C  I  A ++F    +R+V+ W ++++  
Sbjct: 321 SQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDL 380

Query: 181 GLNCKHDDALRVFKVSGDESKEVNGL 206
            ++    DAL +F     E  + NG+
Sbjct: 381 SVHGLGKDALEIFSEMVYEGFKPNGI 406

[Close]
BLAST of Cp4.1LG19g06380 vs. ExPASy Swiss-Prot
Match: Q9M4P3 (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DYW10 PE=2 SV=3)

HSP 1 Score: 136.3 bits (342), Expect = 9.1e-31
Identity = 66/194 (34.02%), Postives = 109/194 (56.19%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           M ++N +SW  +I G +E G +E A  FF   P R V AW +M+ GY    +VE A  +F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240

Query: 61  EKMPF-RNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTF 120
           + M   +N+++W ++I G  +N R  + L +F+ ML   I+P SS L+ AL  C+ +   
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300

Query: 121 FIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGY 180
            +G QIH ++ K+  C D     SLI+ Y  C  + +A+ +F    +++V  W A+++GY
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360

Query: 181 GLNCKHDDALRVFK 194
             +   D AL +F+
Sbjct: 361 AQHGNADKALCLFR 374

[Close]
BLAST of Cp4.1LG19g06380 vs. ExPASy Swiss-Prot
Match: Q9C8L6 (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E63 PE=2 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 2.0e-30
Identity = 66/205 (32.20%), Postives = 109/205 (53.17%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           M  ++ +SW ++I GL++  ++  A   F +MP +D+ +W  M+ G+   G +   VELF
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELF 395

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
             MP ++ I+WT++I     NG   EAL  F KML   + P S T +  L+A A++    
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLI 455

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
            G+QIHG +VK     D  +  SL++ Y  C    +A+ IF+     N+  +  +++GY 
Sbjct: 456 EGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYS 515

Query: 181 LNCKHDDALRVFKVSGDESKEVNGL 206
            N     AL++F +     KE NG+
Sbjct: 516 YNGFGKKALKLFSMLESSGKEPNGV 540

[Close]
BLAST of Cp4.1LG19g06380 vs. NCBI nr
Match: KAG6594505.1 (hypothetical protein SDJN03_11058, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 447 bits (1149), Expect = 2.42e-153
Identity = 250/260 (96.15%), Postives = 252/260 (96.92%), Query Frame = 0 

Query: 235 MTITEREEDRETVTNATIEQIKEKEEEQEEEIDQTKKEEDDDEELNLDAMLSEIVKDSES 294
           MTITEREEDRETVTNATIE+IKEKEEE+EEEIDQTKKEEDDDEELNLD MLSEIVKDSES
Sbjct: 1   MTITEREEDRETVTNATIEEIKEKEEEEEEEIDQTKKEEDDDEELNLDTMLSEIVKDSES 60

Query: 295 GSSMKEMEEHEEQVSKRTRIAESGEAEVAEEAETEQLRIGSDPAVDPLDITMEIVSKYHD 354
           GSSMKEMEEHEEQ SKRTRIAESG      EAETEQLRIGSDPAVDPLDITMEIVSKYHD
Sbjct: 61  GSSMKEMEEHEEQESKRTRIAESG------EAETEQLRIGSDPAVDPLDITMEIVSKYHD 120

Query: 355 FVDFALEILEEEQKYEEEQKYGEEQKIEEEMKTQLWSEVFERGKQLVESLKQRLQRLPYE 414
           FVDFALEILEEEQKYEEEQKYGEEQKIEEEMKTQLWSEVFERGKQLVESLKQRLQRLPYE
Sbjct: 121 FVDFALEILEEEQKYEEEQKYGEEQKIEEEMKTQLWSEVFERGKQLVESLKQRLQRLPYE 180

Query: 415 LNRMKNDKNLREKYTTRKFCVQHILPQLRHLNSRVDTCPHIRILSDDNSTVRVLPLYFDE 474
           LNRMKNDKNLREKYTTRKFCVQHILPQLRHLNSRVDTCPHIRILSDDNSTVRVLPLYFDE
Sbjct: 181 LNRMKNDKNLREKYTTRKFCVQHILPQLRHLNSRVDTCPHIRILSDDNSTVRVLPLYFDE 240

Query: 475 LHDCKIDLFAMMELIRDLKE 494
           LHDCKIDLFAMMELIRDLKE
Sbjct: 241 LHDCKIDLFAMMELIRDLKE 254

[Close]
BLAST of Cp4.1LG19g06380 vs. NCBI nr
Match: XP_022926452.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 400 bits (1029), Expect = 4.46e-129
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF
Sbjct: 139 MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 198

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF
Sbjct: 199 EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 258

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG
Sbjct: 259 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 318

Query: 181 LNCKHDDALRVFK 193
           LNCKHDDALRVFK
Sbjct: 319 LNCKHDDALRVFK 331

[Close]
BLAST of Cp4.1LG19g06380 vs. NCBI nr
Match: XP_023518896.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023518897.1 pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400 bits (1029), Expect = 4.46e-129
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF
Sbjct: 139 MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 198

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF
Sbjct: 199 EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 258

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG
Sbjct: 259 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 318

Query: 181 LNCKHDDALRVFK 193
           LNCKHDDALRVFK
Sbjct: 319 LNCKHDDALRVFK 331

[Close]
BLAST of Cp4.1LG19g06380 vs. NCBI nr
Match: XP_022926451.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 400 bits (1029), Expect = 9.76e-129
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF
Sbjct: 139 MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 198

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF
Sbjct: 199 EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 258

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG
Sbjct: 259 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 318

Query: 181 LNCKHDDALRVFK 193
           LNCKHDDALRVFK
Sbjct: 319 LNCKHDDALRVFK 331

[Close]
BLAST of Cp4.1LG19g06380 vs. NCBI nr
Match: XP_023518895.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400 bits (1029), Expect = 9.76e-129
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF
Sbjct: 139 MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 198

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF
Sbjct: 199 EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 258

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG
Sbjct: 259 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 318

Query: 181 LNCKHDDALRVFK 193
           LNCKHDDALRVFK
Sbjct: 319 LNCKHDDALRVFK 331

[Close]
BLAST of Cp4.1LG19g06380 vs. ExPASy TrEMBL
Match: A0A6J1EEH2 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433598 PE=3 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 2.16e-129
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF
Sbjct: 139 MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 198

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF
Sbjct: 199 EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 258

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG
Sbjct: 259 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 318

Query: 181 LNCKHDDALRVFK 193
           LNCKHDDALRVFK
Sbjct: 319 LNCKHDDALRVFK 331

[Close]
BLAST of Cp4.1LG19g06380 vs. ExPASy TrEMBL
Match: A0A6J1EEY6 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433598 PE=3 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 4.73e-129
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF
Sbjct: 139 MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 198

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF
Sbjct: 199 EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 258

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG
Sbjct: 259 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 318

Query: 181 LNCKHDDALRVFK 193
           LNCKHDDALRVFK
Sbjct: 319 LNCKHDDALRVFK 331

[Close]
BLAST of Cp4.1LG19g06380 vs. ExPASy TrEMBL
Match: A0A6J1KR12 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111497475 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 9.57e-128
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF
Sbjct: 139 MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 198

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTF 
Sbjct: 199 EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFV 258

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFN+DLRRNVAVWTALLTGYG
Sbjct: 259 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNEDLRRNVAVWTALLTGYG 318

Query: 181 LNCKHDDALRVFK 193
           LNCKHDDALRVFK
Sbjct: 319 LNCKHDDALRVFK 331

[Close]
BLAST of Cp4.1LG19g06380 vs. ExPASy TrEMBL
Match: A0A6J1CKH5 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012276 PE=3 SV=1)

HSP 1 Score: 352 bits (904), Expect = 1.93e-110
Identity = 162/193 (83.94%), Postives = 180/193 (93.26%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MP+RNV+SWTTIIDGLLEFGRVE+AER FWEMPTRDVAAWNSM+HGYFSNGRVEDA ELF
Sbjct: 137 MPERNVVSWTTIIDGLLEFGRVEIAERLFWEMPTRDVAAWNSMIHGYFSNGRVEDAFELF 196

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           EKMP RNVISWTS+IGGL QNG+S+EALL+FQKML SF+KPT STLAC LT CAN+   F
Sbjct: 197 EKMPLRNVISWTSMIGGLGQNGKSFEALLIFQKMLTSFVKPTPSTLACVLTVCANMCALF 256

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           +GVQIHGLIVKTG+CFDEYI+ASLITFYANCKLI+NA DIFND+LRRNV VWTALLTGYG
Sbjct: 257 LGVQIHGLIVKTGYCFDEYISASLITFYANCKLIENASDIFNDNLRRNVVVWTALLTGYG 316

Query: 181 LNCKHDDALRVFK 193
           LNCKH++AL+VFK
Sbjct: 317 LNCKHENALQVFK 329

[Close]
BLAST of Cp4.1LG19g06380 vs. ExPASy TrEMBL
Match: A0A5D3CMS7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008650 PE=3 SV=1)

HSP 1 Score: 334 bits (856), Expect = 2.94e-104
Identity = 156/193 (80.83%), Postives = 178/193 (92.23%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           M +RNV+SWTTII+GLLEFGRVE+AE  F  MPT+DVAAWNSMVHG+FSNGR+EDA+ELF
Sbjct: 53  MSERNVVSWTTIINGLLEFGRVEIAECLFRVMPTKDVAAWNSMVHGFFSNGRIEDAIELF 112

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           EKMP+RNVI+WTSVIGGLD NGRS+EAL+VFQKMLAS+ KP+SSTLACALTACANI   F
Sbjct: 113 EKMPYRNVITWTSVIGGLDHNGRSFEALVVFQKMLASYFKPSSSTLACALTACANICAPF 172

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           IGVQIHGLI KTG+CFDEY++ASLI+FYANCKLI+NA  IFND++RRNV VWTALLTGYG
Sbjct: 173 IGVQIHGLIFKTGYCFDEYVSASLISFYANCKLIENASSIFNDNVRRNVVVWTALLTGYG 232

Query: 181 LNCKHDDALRVFK 193
           LNCKH DAL+VFK
Sbjct: 233 LNCKHTDALQVFK 245

[Close]
BLAST of Cp4.1LG19g06380 vs. TAIR 10
Match: AT5G46460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-63
Identity = 112/221 (50.68%), Postives = 158/221 (71.49%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MP+R+V+SWT +++G    G+V+ AER F++MP +D AAWNSMVHGY   G+V+DA++LF
Sbjct: 123 MPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLF 182

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           ++MP +NVISWT++I GLDQN RS EAL +F+ ML   IK TS    C +TACAN   F 
Sbjct: 183 KQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFH 242

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           +G+Q+HGLI+K G  ++EY++ASLITFYANCK I ++  +F++ +   VAVWTALL+GY 
Sbjct: 243 MGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS 302

Query: 181 LNCKHDDALRVF------KVSGDESKEVNGLRKFSSESILE 216
           LN KH+DAL +F       +  ++S   +GL   S+   L+
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLD 343

[Close]
BLAST of Cp4.1LG19g06380 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 5.6e-36
Identity = 72/221 (32.58%), Postives = 126/221 (57.01%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MP+RN +SW  ++ G ++  R+E+A+  F  MP R+V+ WN+M+ GY   G++ +A  LF
Sbjct: 307 MPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLF 366

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
           +KMP R+ +SW ++I G  Q+G S+EAL +F +M     +   S+ + AL+ CA++    
Sbjct: 367 DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE 426

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
           +G Q+HG +VK G+    ++  +L+  Y  C  I+ A D+F +   +++  W  ++ GY 
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486

Query: 181 LNCKHDDALRVFKVSGDESKEVNGLRKFSSESILEVDCSSH 222
            +   + ALR F     ES +  GL+   +  +  +   SH
Sbjct: 487 RHGFGEVALRFF-----ESMKREGLKPDDATMVAVLSACSH 522

[Close]
BLAST of Cp4.1LG19g06380 vs. TAIR 10
Match: AT4G18840.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 4.9e-32
Identity = 70/206 (33.98%), Postives = 114/206 (55.34%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           MP R+ +SW +++   LE G V+ A   F EM  R+V +WN M+ GY + G V++A E+F
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVF 260

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKML-ASFIKPTSSTLACALTACANIRTF 120
           + MP R+V+SW +++      G   E L VF KML  S  KP   TL   L+ACA++ + 
Sbjct: 261 DSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSL 320

Query: 121 FIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGY 180
             G  +H  I K G   + ++A +L+  Y+ C  I  A ++F    +R+V+ W ++++  
Sbjct: 321 SQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDL 380

Query: 181 GLNCKHDDALRVFKVSGDESKEVNGL 206
            ++    DAL +F     E  + NG+
Sbjct: 381 SVHGLGKDALEIFSEMVYEGFKPNGI 406

[Close]
BLAST of Cp4.1LG19g06380 vs. TAIR 10
Match: AT4G16835.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 6.5e-32
Identity = 66/194 (34.02%), Postives = 109/194 (56.19%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           M ++N +SW  +I G +E G +E A  FF   P R V AW +M+ GY    +VE A  +F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240

Query: 61  EKMPF-RNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTF 120
           + M   +N+++W ++I G  +N R  + L +F+ ML   I+P SS L+ AL  C+ +   
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300

Query: 121 FIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGY 180
            +G QIH ++ K+  C D     SLI+ Y  C  + +A+ +F    +++V  W A+++GY
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360

Query: 181 GLNCKHDDALRVFK 194
             +   D AL +F+
Sbjct: 361 AQHGNADKALCLFR 374

[Close]
BLAST of Cp4.1LG19g06380 vs. TAIR 10
Match: AT1G53600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-31
Identity = 66/205 (32.20%), Postives = 109/205 (53.17%), Query Frame = 0 

Query: 1   MPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELF 60
           M  ++ +SW ++I GL++  ++  A   F +MP +D+ +W  M+ G+   G +   VELF
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELF 395

Query: 61  EKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFF 120
             MP ++ I+WT++I     NG   EAL  F KML   + P S T +  L+A A++    
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLI 455

Query: 121 IGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYG 180
            G+QIHG +VK     D  +  SL++ Y  C    +A+ IF+     N+  +  +++GY 
Sbjct: 456 EGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYS 515

Query: 181 LNCKHDDALRVFKVSGDESKEVNGL 206
            N     AL++F +     KE NG+
Sbjct: 516 YNGFGKKALKLFSMLESSGKEPNGV 540

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g06380 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FHF91.5e-6250.68Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidop... [more]
Q9SY027.9e-3532.58Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
O493997.0e-3133.98Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX... [more]
Q9M4P39.1e-3134.02Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidop... [more]
Q9C8L62.0e-3032.20Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidop... [more]
BLAST of Cp4.1LG19g06380 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594505.12.42e-15396.15hypothetical protein SDJN03_11058, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022926452.14.46e-129100.00pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X2 ... [more]
XP_023518896.14.46e-129100.00pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like isofor... [more]
XP_022926451.19.76e-129100.00pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 ... [more]
XP_023518895.19.76e-129100.00pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like isofor... [more]
BLAST of Cp4.1LG19g06380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EEH22.16e-129100.00pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X2 ... [more]
A0A6J1EEY64.73e-129100.00pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 ... [more]
A0A6J1KR129.57e-12898.96pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Cucurbit... [more]
A0A6J1CKH51.93e-11083.94pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Momordic... [more]
A0A5D3CMS72.94e-10480.83Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Cp4.1LG19g06380 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G46460.11.1e-6350.68Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G02750.15.6e-3632.58Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G18840.14.9e-3233.98Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT4G16835.16.5e-3234.02Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G53600.11.4e-3132.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 401..421
NoneNo IPR availableCOILSCoilCoilcoord: 252..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..334
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 19..193
coord: 65..215
coord: 5..63
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 80..332
e-value: 9.2E-16
score: 60.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..68
e-value: 2.3E-16
score: 61.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 39..66
e-value: 7.7E-8
score: 32.1
coord: 69..95
e-value: 0.034
score: 14.4
coord: 7..36
e-value: 0.0011
score: 19.1
coord: 171..193
e-value: 0.087
score: 13.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 39..66
e-value: 4.4E-7
score: 27.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 5..35
score: 8.867749
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 36..70
score: 11.849223

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g06380.1Cp4.1LG19g06380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding