Cp4.1LG19g06100 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g06100
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Cp4.1LG19: 7643799 .. 7645066 (-)
RNA-Seq Expression	Cp4.1LG19g06100
Synteny	Cp4.1LG19g06100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGCACCGCGAGCTCTGTTCAAGATACAAAATGACAGATTTCTCATTAGCATTTGCAAGAGACGTTTTAGTGATGATGAAAAACTTCCTCAAAAGTTTTAAGATCCAAACCAAATATGGAACAACAGCAGGAGCCACAGCATCGAGTGTCATAATCTCCGGCATTGGTCTCATGTTGATTTATGCCTATACTCAGAGGAAAAAGGAGAAAAAAACCCAGCGTGTTTTCACAAGATCAATGTCCATAGGAGCTCTACATGGCGGCAGAATAGCCATGAAAAGAATGCTTCAATACCATAAAATGCGAGCAAACCAAGAAATTCAACATCATTATTTAGAGACGTTAGAGAACATGACGAACACAGACACTCCTGACTTCCCACATATTCAGGTGAAGCATTTAACTTTTACTATCAAACAAGTTGTGTGGATGCTTATATTGATCGTTTTAATGTGCAAAAGAACGTTCTGGCAAAGATGGAAATGATAGGACAAGAAGACAAAGCTATTGAGATATTAAAAAAAGCAGTAAAAGAAGCCAATGAGAAATCACTGTCATACCATGAATATGAATATCAGATGCTTCTTGTAGAAGCGCTCATTTACAAGGTGTTTCTTACTACAAACTTGTTTCTTAATCGCTCACATTTGATCCAAAAAAATGTGAATCTCAGCCTCCAAATTTGTTTTTTTTTTCTTTTCTATGCATTTCTAGGGAGATATTGAGGAGGCAGCAAAGGCTGAATGCTTGAATCATGATGAGCCTTCAGATGTTCGACGATTATTGTATAAGGTACATAATTGTTCATATATTTCTTGTAGAAAAAGGGTTAAAAACCTTATATTTGTCTGTGTGGCATTTCTTCGAACACTTGGCAGACAATAATTGAACTGCTGCTGAATAACCCCCAAGAGGCAGAAGAAGAATGGGAGAAGTTTAGGGAAATGAGAGAACAATTCTTCTTACCACCTGACATTAAAGACTCTGGTTTTTACAAGCTCGTCAACCATTTCGAGGATTTTAAACGAGTCGTCGACCTGCTCAAACAAGACATTGATCAAAAGAAGAAAACAAAATAAAAAGCAAACAAGCCCCCTCTAACTTTTACTGCAATTATGTAAATAATTTAGGAAACTCCAAATGAAAAGAAAAATAGTGATGAAATAAAATGGAAGGACATTTGAATACCATCTATGCTTCCATTCTTTCTTCCACTTAAATTAATCTTAATGAAAAAAATATATTCATTTTACTTATTCATAATCACT

mRNA sequence

CGGCACCGCGAGCTCTGTTCAAGATACAAAATGACAGATTTCTCATTAGCATTTGCAAGAGACGTTTTAGTGATGATGAAAAACTTCCTCAAAAGTTTTAAGATCCAAACCAAATATGGAACAACAGCAGGAGCCACAGCATCGAGTGTCATAATCTCCGGCATTGGTCTCATGTTGATTTATGCCTATACTCAGAGGAAAAAGGAGAAAAAAACCCAGCGTGTTTTCACAAGATCAATGTCCATAGGAGCTCTACATGGCGGCAGAATAGCCATGAAAAGAATGCTTCAATACCATAAAATGCGAGCAAACCAAGAAATTCAACATCATTATTTAGAGACGTTAGAGAACATGACGAACACAGACACTCCTGACTTCCCACATATTCAGAACGTTCTGGCAAAGATGGAAATGATAGGACAAGAAGACAAAGCTATTGAGATATTAAAAAAAGCAGTAAAAGAAGCCAATGAGAAATCACTGTCATACCATGAATATGAATATCAGATGCTTCTTGTAGAAGCGCTCATTTACAAGGGAGATATTGAGGAGGCAGCAAAGGCTGAATGCTTGAATCATGATGAGCCTTCAGATGTTCGACGATTATTGTATAAGACAATAATTGAACTGCTGCTGAATAACCCCCAAGAGGCAGAAGAAGAATGGGAGAAGTTTAGGGAAATGAGAGAACAATTCTTCTTACCACCTGACATTAAAGACTCTGGTTTTTACAAGCTCGTCAACCATTTCGAGGATTTTAAACGAGTCGTCGACCTGCTCAAACAAGACATTGATCAAAAGAAGAAAACAAAATAAAAAGCAAACAAGCCCCCTCTAACTTTTACTGCAATTATGTAAATAATTTAGGAAACTCCAAATGAAAAGAAAAATAGTGATGAAATAAAATGGAAGGACATTTGAATACCATCTATGCTTCCATTCTTTCTTCCACTTAAATTAATCTTAATGAAAAAAATATATTCATTTTACTTATTCATAATCACT

Coding sequence (CDS)

ATGACAGATTTCTCATTAGCATTTGCAAGAGACGTTTTAGTGATGATGAAAAACTTCCTCAAAAGTTTTAAGATCCAAACCAAATATGGAACAACAGCAGGAGCCACAGCATCGAGTGTCATAATCTCCGGCATTGGTCTCATGTTGATTTATGCCTATACTCAGAGGAAAAAGGAGAAAAAAACCCAGCGTGTTTTCACAAGATCAATGTCCATAGGAGCTCTACATGGCGGCAGAATAGCCATGAAAAGAATGCTTCAATACCATAAAATGCGAGCAAACCAAGAAATTCAACATCATTATTTAGAGACGTTAGAGAACATGACGAACACAGACACTCCTGACTTCCCACATATTCAGAACGTTCTGGCAAAGATGGAAATGATAGGACAAGAAGACAAAGCTATTGAGATATTAAAAAAAGCAGTAAAAGAAGCCAATGAGAAATCACTGTCATACCATGAATATGAATATCAGATGCTTCTTGTAGAAGCGCTCATTTACAAGGGAGATATTGAGGAGGCAGCAAAGGCTGAATGCTTGAATCATGATGAGCCTTCAGATGTTCGACGATTATTGTATAAGACAATAATTGAACTGCTGCTGAATAACCCCCAAGAGGCAGAAGAAGAATGGGAGAAGTTTAGGGAAATGAGAGAACAATTCTTCTTACCACCTGACATTAAAGACTCTGGTTTTTACAAGCTCGTCAACCATTTCGAGGATTTTAAACGAGTCGTCGACCTGCTCAAACAAGACATTGATCAAAAGAAGAAAACAAAATAA

Protein sequence

MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEKKTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQNVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAECLNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDIDQKKKTK

Homology

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BLAST of Cp4.1LG19g06100 vs. NCBI nr
Match: XP_023518384.1 (uncharacterized protein LOC111781887 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510 bits (1313), Expect = 4.97e-182
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK
Sbjct: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
           KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ
Sbjct: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
           NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC
Sbjct: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180

Query: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240
           LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF
Sbjct: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240

Query: 241 EDFKRVVDLLKQDIDQKKKTK 261
           EDFKRVVDLLKQDIDQKKKTK
Sbjct: 241 EDFKRVVDLLKQDIDQKKKTK 261

[Close]

BLAST of Cp4.1LG19g06100 vs. NCBI nr
Match: XP_022926668.1 (uncharacterized protein LOC111433729 [Cucurbita moschata])

HSP 1 Score: 490 bits (1261), Expect = 4.20e-174
Identity = 252/261 (96.55%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M  FSLAFARDV VMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK
Sbjct: 1   MAYFSLAFARDVFVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
           KTQRVFTRSMSIGALHGGRIAMKRMLQYHK+RANQEIQH YLE LENMTNTDTPDFPHIQ
Sbjct: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFPHIQ 120

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
           +VLAKMEMIGQEDKAIEILKKAVKEA EKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC
Sbjct: 121 DVLAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180

Query: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240
           LNHDEPSDVRRLLYKTIIELLLNNPQ+AEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF
Sbjct: 181 LNHDEPSDVRRLLYKTIIELLLNNPQKAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240

Query: 241 EDFKRVVDLLKQDIDQKKKTK 261
           EDFKRVVDLLKQDIDQKKKTK
Sbjct: 241 EDFKRVVDLLKQDIDQKKKTK 261

[Close]

BLAST of Cp4.1LG19g06100 vs. NCBI nr
Match: KAG7026464.1 (hypothetical protein SDJN02_10464, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486 bits (1250), Expect = 2.00e-172
Identity = 250/261 (95.79%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M  FSLAFARDV  MMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK
Sbjct: 1   MAYFSLAFARDVFEMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
           KTQRVFTRSMSIGALHGGRIAMKRMLQYHK+RANQEIQH YLE LEN  NTDTPDFPHIQ
Sbjct: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENTMNTDTPDFPHIQ 120

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
           NV+AKMEMIGQEDKAIEILKKAVKEA EKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC
Sbjct: 121 NVMAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180

Query: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240
           LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF
Sbjct: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240

Query: 241 EDFKRVVDLLKQDIDQKKKTK 261
           EDFKRVVDLLKQDIDQKKKTK
Sbjct: 241 EDFKRVVDLLKQDIDQKKKTK 261

[Close]

BLAST of Cp4.1LG19g06100 vs. NCBI nr
Match: KAG6594466.1 (hypothetical protein SDJN03_11019, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 481 bits (1238), Expect = 1.35e-170
Identity = 247/261 (94.64%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M  FSLAFARDV  MMKNFLKSFKIQTKYGTTAGATASSVIIS IGLMLIYAYTQRKKEK
Sbjct: 1   MAYFSLAFARDVFEMMKNFLKSFKIQTKYGTTAGATASSVIISSIGLMLIYAYTQRKKEK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
           KTQRVFTRSMSIGALHGGRIAMKRMLQYHK+RANQEIQH YLE LENM NTDTPDFPHIQ
Sbjct: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMMNTDTPDFPHIQ 120

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
           NV+AKMEMIGQEDKAIEILKKAVKEA EKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC
Sbjct: 121 NVMAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180

Query: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240
           LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF
Sbjct: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240

Query: 241 EDFKRVVDLLKQDIDQKKKTK 261
           +DFKRVV+LLKQ+IDQKKKTK
Sbjct: 241 DDFKRVVNLLKQEIDQKKKTK 261

[Close]

BLAST of Cp4.1LG19g06100 vs. NCBI nr
Match: XP_023003990.1 (uncharacterized protein LOC111497439 [Cucurbita maxima])

HSP 1 Score: 473 bits (1216), Expect = 3.04e-167
Identity = 243/261 (93.10%), Postives = 249/261 (95.40%), Query Frame = 0


Query: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M DFSLAFARDV +MMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK
Sbjct: 1   MRDFSLAFARDVFLMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
           KTQRVFTRSMSIGALHGGRIAMKRMLQY KMRANQEIQ+ YLE LEN T+TDTPDFPHIQ
Sbjct: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYQKMRANQEIQYDYLEKLENTTSTDTPDFPHIQ 120

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
            VL KMEM GQEDKAIEILKKAVKEA E+SLSYHEYEYQMLLVEALIYKGDIEEAAKAEC
Sbjct: 121 TVLTKMEMRGQEDKAIEILKKAVKEAKEQSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180

Query: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240
           LNHDEPSDVRRLLYKTIIELLLNNPQ+AEEEWEKFREMR  FFLPPDI+DSGFYKLVNHF
Sbjct: 181 LNHDEPSDVRRLLYKTIIELLLNNPQKAEEEWEKFREMRRHFFLPPDIRDSGFYKLVNHF 240

Query: 241 EDFKRVVDLLKQDIDQKKKTK 261
           EDFKRVVDLLKQDIDQKKKTK
Sbjct: 241 EDFKRVVDLLKQDIDQKKKTK 261

[Close]

BLAST of Cp4.1LG19g06100 vs. ExPASy TrEMBL
Match: A0A6J1EIU2 (uncharacterized protein LOC111433729 OS=Cucurbita moschata OX=3662 GN=LOC111433729 PE=4 SV=1)

HSP 1 Score: 490 bits (1261), Expect = 2.03e-174
Identity = 252/261 (96.55%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M  FSLAFARDV VMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK
Sbjct: 1   MAYFSLAFARDVFVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
           KTQRVFTRSMSIGALHGGRIAMKRMLQYHK+RANQEIQH YLE LENMTNTDTPDFPHIQ
Sbjct: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQEIQHDYLEKLENMTNTDTPDFPHIQ 120

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
           +VLAKMEMIGQEDKAIEILKKAVKEA EKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC
Sbjct: 121 DVLAKMEMIGQEDKAIEILKKAVKEAKEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180

Query: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240
           LNHDEPSDVRRLLYKTIIELLLNNPQ+AEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF
Sbjct: 181 LNHDEPSDVRRLLYKTIIELLLNNPQKAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240

Query: 241 EDFKRVVDLLKQDIDQKKKTK 261
           EDFKRVVDLLKQDIDQKKKTK
Sbjct: 241 EDFKRVVDLLKQDIDQKKKTK 261

[Close]

BLAST of Cp4.1LG19g06100 vs. ExPASy TrEMBL
Match: A0A6J1KTB7 (uncharacterized protein LOC111497439 OS=Cucurbita maxima OX=3661 GN=LOC111497439 PE=4 SV=1)

HSP 1 Score: 473 bits (1216), Expect = 1.47e-167
Identity = 243/261 (93.10%), Postives = 249/261 (95.40%), Query Frame = 0


Query: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M DFSLAFARDV +MMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK
Sbjct: 1   MRDFSLAFARDVFLMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
           KTQRVFTRSMSIGALHGGRIAMKRMLQY KMRANQEIQ+ YLE LEN T+TDTPDFPHIQ
Sbjct: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYQKMRANQEIQYDYLEKLENTTSTDTPDFPHIQ 120

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
            VL KMEM GQEDKAIEILKKAVKEA E+SLSYHEYEYQMLLVEALIYKGDIEEAAKAEC
Sbjct: 121 TVLTKMEMRGQEDKAIEILKKAVKEAKEQSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180

Query: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240
           LNHDEPSDVRRLLYKTIIELLLNNPQ+AEEEWEKFREMR  FFLPPDI+DSGFYKLVNHF
Sbjct: 181 LNHDEPSDVRRLLYKTIIELLLNNPQKAEEEWEKFREMRRHFFLPPDIRDSGFYKLVNHF 240

Query: 241 EDFKRVVDLLKQDIDQKKKTK 261
           EDFKRVVDLLKQDIDQKKKTK
Sbjct: 241 EDFKRVVDLLKQDIDQKKKTK 261

[Close]

BLAST of Cp4.1LG19g06100 vs. ExPASy TrEMBL
Match: A0A6J1CZJ5 (uncharacterized protein LOC111015701 OS=Momordica charantia OX=3673 GN=LOC111015701 PE=4 SV=1)

HSP 1 Score: 340 bits (871), Expect = 5.16e-115
Identity = 175/261 (67.05%), Postives = 213/261 (81.61%), Query Frame = 0


Query: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M  FSL  ARD L++M+NFLKSFKIQTKYGT+A A ASSVIISGIGL+LIY YTQRK+EK
Sbjct: 1   MPHFSLDDARDFLLIMRNFLKSFKIQTKYGTSAAAAASSVIISGIGLVLIYVYTQRKREK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
             +RVF RSMSIGALHGG++AMKR+LQY KMRA ++ Q   LE LE M     PDF  +Q
Sbjct: 61  NDRRVFMRSMSIGALHGGKLAMKRLLQYQKMRATEKNQDQVLEKLEKMIKDCAPDFAKLQ 120

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
           +++AK+EM GQEDKAIEILKKA KEA E SL ++EYEYQ+LLVE LIYKG+I EA +A C
Sbjct: 121 SIVAKLEMRGQEDKAIEILKKAAKEAKENSLLHYEYEYQILLVEMLIYKGNIGEAERASC 180

Query: 181 LNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHF 240
           LN +E SDVRR LYK II++LLNNP++A+E+WE+F+EMR +F LPPD+KDS FYKLV  F
Sbjct: 181 LNQEETSDVRRSLYKAIIQVLLNNPKKAKEKWEEFKEMRSRFLLPPDVKDSQFYKLVTEF 240

Query: 241 EDFKRVVDLLKQDIDQKKKTK 261
           E FK+VVDLL +DI+++ K K
Sbjct: 241 EMFKQVVDLLGKDIEERNKEK 261

[Close]

BLAST of Cp4.1LG19g06100 vs. ExPASy TrEMBL
Match: A0A0A0KLZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523380 PE=4 SV=1)

HSP 1 Score: 280 bits (715), Expect = 3.14e-91
Identity = 146/267 (54.68%), Postives = 193/267 (72.28%), Query Frame = 0


Query: 1   MTDFSLAFARDVLVMMKNFLKSFKIQTKYGTTAGATASSVIISGIGLMLIYAYTQRKKEK 60
           M+ FS     D    + NF + F +QTKYG  AGATAS+ I+SG+GL+L+Y  T+  K+K
Sbjct: 1   MSHFSFDSVEDFFQALNNFYQKFNVQTKYGPRAGATASTFIVSGVGLVLVYFVTRILKKK 60

Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDT------P 120
            +QRVFTRS+SIGALHGG+IAMKR+LQ+ KMRAN E +  +++ L++    DT      P
Sbjct: 61  NSQRVFTRSISIGALHGGKIAMKRLLQFQKMRANPENKDKFMKKLDSRIKLDTKIESEHP 120

Query: 121 DFPHIQNVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEE 180
           +F  IQN++ K+EM+GQEDKAIE LK A +EA +KSL  +E+EYQMLLVE  IYKGD+ +
Sbjct: 121 NFTKIQNIVTKLEMLGQEDKAIEKLKNAAEEAKKKSLPLYEHEYQMLLVELYIYKGDLVK 180

Query: 181 AAKAECLNHDEPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFY 240
           A +  CL +D  SDVRR LYK II++L N  QEA +EWE+FREMR  F LPPD+KDS FY
Sbjct: 181 AEELPCLKNDATSDVRRPLYKAIIKVLQNETQEAIKEWEEFREMRSAFLLPPDVKDSHFY 240

Query: 241 KLVNHFEDFKRVVDLLKQDIDQKKKTK 261
            L+  F+ FKRVV +L++DI +K + K
Sbjct: 241 ALLADFDSFKRVVQVLREDIFKKPRAK 267

[Close]

BLAST of Cp4.1LG19g06100 vs. ExPASy TrEMBL
Match: A0A5D3CMZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009020 PE=4 SV=1)

HSP 1 Score: 176 bits (447), Expect = 5.10e-52
Identity = 91/171 (53.22%), Postives = 126/171 (73.68%), Query Frame = 0


Query: 91  MRANQEIQHHYLETLENMTNTDTPDFPHIQNVLAKMEMIGQEDKAIEILKKAVKEANEKS 150
           MRAN E +  YL+ L+    +D PDF  +QN++AK+EM+GQEDK IE LK A ++A EKS
Sbjct: 1   MRANPEKKDKYLKKLDTKIESDLPDFLKLQNIVAKLEMLGQEDKVIEKLKIAAEKA-EKS 60

Query: 151 LSYHEYEYQMLLVEALIYKGDIEEAAKAECLNHDEPSDVRRLLYKTIIELLLNNPQEAEE 210
              +EYEYQMLLVE  IYKG+  +A +  CLN+++ SDVRR L+K II++LLN  QEA +
Sbjct: 61  FPLYEYEYQMLLVELYIYKGEFAKAEELPCLNNNDNSDVRRPLFKAIIKVLLNETQEAIK 120

Query: 211 EWEKFREMREQFFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDIDQKKKTK 261
           EWE+FR++R  + LPPD+KDS FY L+  F+ F+RVV +L++DI +K + K
Sbjct: 121 EWEEFRKLRSDYLLPPDVKDSQFYTLLADFDSFERVVKVLREDIFKKPRAK 170

[Close]

BLAST of Cp4.1LG19g06100 vs. TAIR 10
Match: AT2G34530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34540.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29
Identity = 72/202 (35.64%), Postives = 125/202 (61.88%), Query Frame = 0


Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
           + +R  ++S+S+GA+ GG++A++R+L  H  R +     +     E + + + PDF  +Q
Sbjct: 69  RDERTLSKSVSMGAIRGGKLALQRLLDLHSYRGDTSSLANAELEFEALLSKEKPDFGLLQ 128

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
             + KMEM G+E K  E+LKKA+++A ++   +  YE +MLLVE LIY G++EEA+K +C
Sbjct: 129 RDIVKMEMSGKEAKGAELLKKALEKARKEGKGHEAYEIEMLLVEMLIYLGNMEEASKCKC 188

Query: 181 LNHDEPSDVRRLLYKTIIELLLNNP-QEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNH 240
           L  +  +D RR LY+TII  L  +P ++ EE + +FRE++     P   ++    ++   
Sbjct: 189 LEDEVITDARRPLYQTIIHYLQGHPMKQVEETFNRFREIQIGLQWPGSSEECEIDQVT-- 248

Query: 241 FEDFKRVVDLLKQDIDQKKKTK 262
           F++FK+V++ LK +I+   K K
Sbjct: 249 FDEFKKVMESLKHEIEDGNKRK 268

[Close]

BLAST of Cp4.1LG19g06100 vs. TAIR 10
Match: AT2G34530.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 101.7 bits (252), Expect = 9.3e-22
Identity = 52/135 (38.52%), Postives = 87/135 (64.44%), Query Frame = 0


Query: 61  KTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQEIQHHYLETLENMTNTDTPDFPHIQ 120
           + +R  ++S+S+GA+ GG++A++R+L  H  R +     +     E + + + PDF  +Q
Sbjct: 69  RDERTLSKSVSMGAIRGGKLALQRLLDLHSYRGDTSSLANAELEFEALLSKEKPDFGLLQ 128

Query: 121 NVLAKMEMIGQEDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKAEC 180
             + KMEM G+E K  E+LKKA+++A ++   +  YE +MLLVE LIY G++EEA+K +C
Sbjct: 129 RDIVKMEMSGKEAKGAELLKKALEKARKEGKGHEAYEIEMLLVEMLIYLGNMEEASKCKC 188

Query: 181 LNHDEPSDVRRLLYK 196
           L  +  +D RR LY+
Sbjct: 189 LEDEVITDARRPLYQ 203

[Close]

BLAST of Cp4.1LG19g06100 vs. TAIR 10
Match: AT2G34540.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 5.0e-07
Identity = 43/132 (32.58%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 102 LETLENMTNTDTPDFPHIQNVLAKMEMIGQEDKAIEILKKA-VKEANEKSLSYHEYEYQM 161
           L  L ++ + D  D   ++ V    E  G+ ++A+++L+ A ++  NE   +++    QM
Sbjct: 162 LHKLPSLPSKDDIDSIKMEAVRKMKE--GKCEEAVQLLRDANMRYRNEPEANFN---VQM 221

Query: 162 LLVEALIYKGDIEEAAKAECLNHD--EPSDVRRLLYKTIIELLLNNPQEAEEEWEKFREM 221
            LVE LI     +EAA+  CLN +  + SDVR  LYK II  +L+   EA++ W++FR+ 
Sbjct: 222 ALVEILILLERYQEAAEYSCLNDENAQISDVRIPLYKAIIYTMLDKDTEAKQCWKEFRKS 281

Query: 222 REQFFLPPDIKD 231
             + F P   +D
Sbjct: 282 IGEGFDPFSFED 288

[Close]

BLAST of Cp4.1LG19g06100 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 6.7e-04
Identity = 29/88 (32.95%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 132 EDKAIEILKKAVKEANEKSLSYHEYEYQMLLVEALIYKGDIEEAAKA-ECLNHDEPSDVR 191
           E +  E + +  KE N K L     ++++L+ +  + +G   EA K  E L  +EP D R
Sbjct: 219 EKRIEEAMVRCKKEKNRKDLR----DFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFR 278

Query: 192 RLLYKTIIELLLNNPQEAEEEWEKFREM 219
             L + II  +L    EAE+++EKFR +
Sbjct: 279 PYLCQGIIYTVLKKENEAEKQFEKFRRL 302

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g06100 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG19g06100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518384.1	4.97e-182	100.00	uncharacterized protein LOC111781887 [Cucurbita pepo subsp. pepo]	[more]
XP_022926668.1	4.20e-174	96.55	uncharacterized protein LOC111433729 [Cucurbita moschata]	[more]
KAG7026464.1	2.00e-172	95.79	hypothetical protein SDJN02_10464, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6594466.1	1.35e-170	94.64	hypothetical protein SDJN03_11019, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023003990.1	3.04e-167	93.10	uncharacterized protein LOC111497439 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG19g06100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIU2	2.03e-174	96.55	uncharacterized protein LOC111433729 OS=Cucurbita moschata OX=3662 GN=LOC1114337...	[more]
A0A6J1KTB7	1.47e-167	93.10	uncharacterized protein LOC111497439 OS=Cucurbita maxima OX=3661 GN=LOC111497439...	[more]
A0A6J1CZJ5	5.16e-115	67.05	uncharacterized protein LOC111015701 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A0A0KLZ3	3.14e-91	54.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523380 PE=4 SV=1	[more]
A0A5D3CMZ4	5.10e-52	53.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cp4.1LG19g06100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34530.1	1.2e-29	35.64	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G34530.2	9.3e-22	38.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G34540.2	5.0e-07	32.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G37400.1	6.7e-04	32.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 129..149
None	No IPR available	COILS	Coil	Coil	coord: 247..261
None	No IPR available	PANTHER	PTHR36350	TRANSMEMBRANE PROTEIN	coord: 14..261
None	No IPR available	PANTHER	PTHR36350:SF3	TRANSMEMBRANE PROTEIN	coord: 14..261
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 45..216
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 43..237 e-value: 1.8E-6 score: 29.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g06100.1	Cp4.1LG19g06100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding