Cp4.1LG19g05860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g05860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG19: 7788199 .. 7790617 (+)
RNA-Seq ExpressionCp4.1LG19g05860
SyntenyCp4.1LG19g05860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGTTATGAACAAAATTTCAACGAATTCACAGGATTATAACTAACATTTGAAAAAGATGGAGAAAACAATCACCTGCATAACATTAAGAAGATGAATCGGTAACAAGAAACCCGGACGGCCCGCGTCGGTGAAATACTGAGGTGGTCGAAGGGAAAATTTTATGGCGACATCAAGAGATTCTGTAGTATTTAGATTTTAAGGCGGCTTTATATTCAAAAGTTTACAATCCCTAATCAAAACATCAAAATGGGACAATTTTTTTTTGTTTTTTAAATTTTCAAATATATAATATATTTATTAAATATACAATTTTAGTTTTAAGAACATATAATATACTTTTTAAAAAGAGAGCGTAAAATTGAAAATTTCCAAATATCTTATAAATAATTGAAAAAAAAAAAAAAAAAAAAATCTAAAATTTATAATCTCTGAAGGTCCAGTTCCAAGTTCCAAGTTCCAAGTTCCAAGCATGTTCCGATGCGCTCAAACCAAGCATCGAACTTTCTCCACTCAAACTTTCCCGGAAAATCACCTCTCTTTCATCCTCAGAAAATGCATTTCTCTCTTACAGTTATGCGGCTCCTCCCAATCCAAGTTGAAGCAAATCCATGCTTTCTCCATCAGACATGGCGTCCCACCCCCAAATCCCGACTTCAACAAGCACCTCATTTTCTCTCTCGTCTCCATTTCAGCCCCCATGTTCTACGCCACCCGGATTTTCCAACAGATTCAAGCCCCCAATATCTTCACATGGAACACCATGGTTAGAGGATTTGCCGAAAGCGAGAATCCCAGGCCGGCCGTGGAGCTGTATTCCCAAATGCACGCGGCGTCGTCCATTCAGCCTGATACGCATACTTTTCCCTTTCTTTTTAAGGCTGTTGCTAAGTTAATGGATGCTAGATTAGGCGAGGGGATTCACTCGATTGTTGTTAGAAATGGGTTTGATTCGTTGCGTTTTGTTCAGAATTCGTTGGTTCATATGTACTCTGTTTTTGGGTTTGCTGAGAGTGCGTATAAGGTGTTTGAGTTTATGTCTGAGAGAGATCTCGTGGCTTGGAACTCTGTTATTAATGGCTTTGCTCTTAATGGGATGGCGAATGAAGCTCTGACCCTTTTTAAGGAAATGGGTTCTGTGGGTGTGGAGCCTGATGGGTTCACTATGGTTAGTTTGTTATCTGCTTGTGTTGAGCTTGGGGCACTGGCCTTGGGGGAGAGGGTTCATGTGTATATGTTGAAGGTTGGTTTAGTACAGAACCCACATGCTAGCAATGCGCTTCTTGATCTCTATTCCAAATGTGGGAACATTGCACATGCACTGAAGGTGTTCGACGAAATGCATGAAAGGAGTGTGGTTTCTTGGACTTCTCTGATTGTTGGGTTGGCTGTTAATGGATTAGGAAATGAAGCTCTTAGACTGTTTGGGGAGTTGGAAAGGAAGGGGTTGAAGCCTAGTGAGATCACATTTGTTGGAGTTTTGTATGCCTGCAGCCACTGTGGGATGGTTGATGAAGGCTTCGATTACTTTAGAAGGATGAAAGAAGAGTATGGCATCTTGCCAAGAATTGAGCACCATGGCTGCATAGTCGATTTGCTGTGCAGAGCGGGCAAGGTCAGAGATGCTTACGAGTATATTCGAAACATGTCGATCCCGCCCAATGCAGTCATTTGGCGGACCTTATTGGGAGCTTGCACAATCCATGGCCATTTGGAACTAGGTGAGATCGCAAGAGCTGAAATCCTACTATTAGAACCGAAGCATTGCGGCGACTTTGTCCTTCTCTCGAACCTTTATGCATCGGAGCGACGTTGGCTAGATGTTCAAAACGTGAGGAGGACAATGCTTATGAAAGGAGTGAAAAAAACTCCTGGGTATAGCCTTGTCGAGTTGAAGAATCGTGTTTATGAATTTATCATGGGCGATCGATCTCATCCTCAAAGTGAGGAGACATACGCAATGCTGGGGAAGATCACGGAGTCGTTGAAAATCGAAGGATACGTTCCTCGCACGGTTAATGTTCTTGCAGACATAGAAGAGGAAGAAAAGGAGACGGCATTGTCTCATCATACAGAGAAAGTTGCAATTGCTTTCATGTTGGTTAACACCCCACCAAGAACTCCAATTAGAATCATGAAGAATTTGAGAGTTTGTGCAGATTGTCATCTGGCAATCAAACTAATATCCAAGGTTTTTGAACGAGAGATCGTCGTAAGGGATCGTAGTAGATTTCATCATTTTAAAGACGGGTTGTGCTCGTGTAAAGATTATTGGTAATATTAGTATCGTCTCCTTATTATATATCTCCATTGATGTCTGTAATTTTTGTTTGAAGGAGAATGATGATTCTATATTGTTTGATATAGAAGATTTTGTTTTTTTATTTATAAATTTACTAAATAGACATGTATTTAA

mRNA sequence

ATGGCTAGTCCAGTTCCAAGTTCCAAGTTCCAAGTTCCAAGCATGTTCCGATGCGCTCAAACCAAGCATCGAACTTTCTCCACTCAAACTTTCCCGGAAAATCACCTCTCTTTCATCCTCAGAAAATGCATTTCTCTCTTACAGTTATGCGGCTCCTCCCAATCCAAGTTGAAGCAAATCCATGCTTTCTCCATCAGACATGGCGTCCCACCCCCAAATCCCGACTTCAACAAGCACCTCATTTTCTCTCTCGTCTCCATTTCAGCCCCCATGTTCTACGCCACCCGGATTTTCCAACAGATTCAAGCCCCCAATATCTTCACATGGAACACCATGGTTAGAGGATTTGCCGAAAGCGAGAATCCCAGGCCGGCCGTGGAGCTGTATTCCCAAATGCACGCGGCGTCGTCCATTCAGCCTGATACGCATACTTTTCCCTTTCTTTTTAAGGCTGTTGCTAAGTTAATGGATGCTAGATTAGGCGAGGGGATTCACTCGATTGTTGTTAGAAATGGGTTTGATTCGTTGCGTTTTGTTCAGAATTCGTTGGTTCATATGTACTCTGTTTTTGGGTTTGCTGAGAGTGCGTATAAGGTGTTTGAGTTTATGTCTGAGAGAGATCTCGTGGCTTGGAACTCTGTTATTAATGGCTTTGCTCTTAATGGGATGGCGAATGAAGCTCTGACCCTTTTTAAGGAAATGGGTTCTGTGGGTGTGGAGCCTGATGGGTTCACTATGACATGTATTTAA

Coding sequence (CDS)

ATGGCTAGTCCAGTTCCAAGTTCCAAGTTCCAAGTTCCAAGCATGTTCCGATGCGCTCAAACCAAGCATCGAACTTTCTCCACTCAAACTTTCCCGGAAAATCACCTCTCTTTCATCCTCAGAAAATGCATTTCTCTCTTACAGTTATGCGGCTCCTCCCAATCCAAGTTGAAGCAAATCCATGCTTTCTCCATCAGACATGGCGTCCCACCCCCAAATCCCGACTTCAACAAGCACCTCATTTTCTCTCTCGTCTCCATTTCAGCCCCCATGTTCTACGCCACCCGGATTTTCCAACAGATTCAAGCCCCCAATATCTTCACATGGAACACCATGGTTAGAGGATTTGCCGAAAGCGAGAATCCCAGGCCGGCCGTGGAGCTGTATTCCCAAATGCACGCGGCGTCGTCCATTCAGCCTGATACGCATACTTTTCCCTTTCTTTTTAAGGCTGTTGCTAAGTTAATGGATGCTAGATTAGGCGAGGGGATTCACTCGATTGTTGTTAGAAATGGGTTTGATTCGTTGCGTTTTGTTCAGAATTCGTTGGTTCATATGTACTCTGTTTTTGGGTTTGCTGAGAGTGCGTATAAGGTGTTTGAGTTTATGTCTGAGAGAGATCTCGTGGCTTGGAACTCTGTTATTAATGGCTTTGCTCTTAATGGGATGGCGAATGAAGCTCTGACCCTTTTTAAGGAAATGGGTTCTGTGGGTGTGGAGCCTGATGGGTTCACTATGACATGTATTTAA

Protein sequence

MASPVPSSKFQVPSMFRCAQTKHRTFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI
Homology
BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 5.0e-62
Identity = 120/215 (55.81%), Postives = 157/215 (73.02%), Query Frame = 0

Query: 39  ILRKCISLLQLCG-SSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVSISA--PMFYAT 98
           ++ KCI+LLQ  G SS +KL+QIHAFSIRHGV   + +  KHLIF LVS+ +  PM YA 
Sbjct: 14  MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73

Query: 99  RIFQQIQAP-NIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFPFLFKAVAK 158
           ++F +I+ P N+F WNT++RG+AE  N   A  LY +M  +  ++PDTHT+PFL KAV  
Sbjct: 74  KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133

Query: 159 LMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSERDLVAWNSV 218
           + D RLGE IHS+V+R+GF SL +VQNSL+H+Y+  G   SAYKVF+ M E+DLVAWNSV
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 193

Query: 219 INGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
           INGFA NG   EAL L+ EM S G++PDGFT+  +
Sbjct: 194 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228

BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.9e-34
Identity = 83/231 (35.93%), Postives = 124/231 (53.68%), Query Frame = 0

Query: 22  KHRTFSTQTFP------ENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPD 81
           +H  FS    P        H+S ++ +C+SL Q        LKQ H   IR G       
Sbjct: 14  RHPNFSNPNQPTTNNERSRHIS-LIERCVSLRQ--------LKQTHGHMIRTGTFSDPYS 73

Query: 82  FNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAA 141
            +K    + +S  A + YA ++F +I  PN F WNT++R +A   +P  ++  +  M + 
Sbjct: 74  ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 133

Query: 142 SSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAES 201
           S   P+ +TFPFL KA A++    LG+ +H + V++   S  FV NSL+H Y   G  +S
Sbjct: 134 SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDS 193

Query: 202 AYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM 247
           A KVF  + E+D+V+WNS+INGF   G  ++AL LFK+M S  V+    TM
Sbjct: 194 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235

BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.6e-31
Identity = 86/223 (38.57%), Postives = 125/223 (56.05%), Query Frame = 0

Query: 27  STQTFP-ENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLV 86
           ST +F   N L  +L KC  LL         LKQI A  I +G+       ++ + F  +
Sbjct: 46  STHSFVLHNPLLSLLEKCKLLLH--------LKQIQAQMIINGLILDPFASSRLIAFCAL 105

Query: 87  SISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQM--HAASSIQPDTH 146
           S S  + Y+ +I + I+ PNIF+WN  +RGF+ESENP+ +  LY QM  H     +PD  
Sbjct: 106 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 165

Query: 147 TFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFM 206
           T+P LFK  A L  + LG  I   V++   + +  V N+ +HM++  G  E+A KVF+  
Sbjct: 166 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 225

Query: 207 SERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM 247
             RDLV+WN +ING+   G A +A+ ++K M S GV+PD  TM
Sbjct: 226 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260

BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match: Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 2.3e-30
Identity = 80/211 (37.91%), Postives = 115/211 (54.50%), Query Frame = 0

Query: 41  RKCISLLQLCGSSQSKLKQIHAFSIRHGVP-PPNPDFNKHLIFSLVSISAPMFYATRIFQ 100
           ++  SL + C S  S+LKQ+HAF++R   P  P   F    I  L S  + + YA R+F 
Sbjct: 49  QRIFSLAETC-SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 108

Query: 101 QIQAPNIFTWNTMVRGFA-ESENPRPAVELYSQMHAASSIQPDTHTFPFLFKAVAKLMDA 160
            I+  + F WNT++R  A +      A  LY +M       PD HTFPF+ KA A +   
Sbjct: 109 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 168

Query: 161 RLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSERDLVAWNSVINGF 220
             G+ +H  +V++GF    +V N L+H+Y   G  + A KVF+ M ER LV+WNS+I+  
Sbjct: 169 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 228

Query: 221 ALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
              G  + AL LF+EM     EPDG+TM  +
Sbjct: 229 VRFGEYDSALQLFREM-QRSFEPDGYTMQSV 257

BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.6e-30
Identity = 78/230 (33.91%), Postives = 122/230 (53.04%), Query Frame = 0

Query: 52  SSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNT 111
           S+  +LKQIHA  I+ G+       ++ L F   S S  M YA  +F +I   N F WNT
Sbjct: 36  STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNT 95

Query: 112 MVRGFAESENPRPAVELYSQMHAAS-SIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVR 171
           ++RGF+ S  P  A+ ++  M  +S S++P   T+P +FKA  +L  AR G  +H +V++
Sbjct: 96  IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 155

Query: 172 NGFDSLRFVQNSLVHMY--------------------------SVFGFA-----ESAYKV 231
            G +   F++N+++HMY                           + GFA     + A  +
Sbjct: 156 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 215

Query: 232 FEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
           F+ M +R+ V+WNS+I+GF  NG   +AL +F+EM    V+PDGFTM  +
Sbjct: 216 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264

BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match: XP_023517386.1 (pentatricopeptide repeat-containing protein At4g21065 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471 bits (1211), Expect = 1.32e-161
Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 0

Query: 15  MFRCAQTKHRTFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNP 74
           MFRCAQTKHRTFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNP
Sbjct: 1   MFRCAQTKHRTFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNP 60

Query: 75  DFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHA 134
           DFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHA
Sbjct: 61  DFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHA 120

Query: 135 ASSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAE 194
           ASSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAE
Sbjct: 121 ASSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAE 180

Query: 195 SAYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           SAYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM  +
Sbjct: 181 SAYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 235

BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match: XP_022926338.1 (pentatricopeptide repeat-containing protein At4g21065 [Cucurbita moschata])

HSP 1 Score: 441 bits (1135), Expect = 4.36e-150
Identity = 219/225 (97.33%), Postives = 221/225 (98.22%), Query Frame = 0

Query: 25  TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
           TFSTQTFPENHLSFILRKCISLLQLCGSS+SKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12  TFSTQTFPENHLSFILRKCISLLQLCGSSRSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71

Query: 85  VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
           VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72  VSISAPMTYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131

Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
           FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191

Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM  +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 236

BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match: XP_023002974.1 (pentatricopeptide repeat-containing protein At4g21065 [Cucurbita maxima])

HSP 1 Score: 439 bits (1130), Expect = 2.49e-149
Identity = 218/225 (96.89%), Postives = 220/225 (97.78%), Query Frame = 0

Query: 25  TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
           TFSTQTFPENHLSFILR CISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12  TFSTQTFPENHLSFILRNCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71

Query: 85  VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
           VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72  VSISAPMSYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131

Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
           FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191

Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGV+PDGFTM  +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVKPDGFTMVSL 236

BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match: KAG7026439.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 443 bits (1139), Expect = 7.11e-141
Identity = 220/225 (97.78%), Postives = 221/225 (98.22%), Query Frame = 0

Query: 25  TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
           TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12  TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71

Query: 85  VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
           VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72  VSISAPMSYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131

Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
           FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191

Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM  +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 236

BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match: KAG6594433.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 442 bits (1136), Expect = 2.18e-140
Identity = 219/225 (97.33%), Postives = 221/225 (98.22%), Query Frame = 0

Query: 25  TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
           TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12  TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71

Query: 85  VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
           VSISAPM YATRIFQQIQAPNIFTWNTMVRGF+ESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72  VSISAPMSYATRIFQQIQAPNIFTWNTMVRGFSESENPRPAVELYSQMHAASSIQPDTHT 131

Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
           FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191

Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM  +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 236

BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match: A0A6J1EHS2 (pentatricopeptide repeat-containing protein At4g21065 OS=Cucurbita moschata OX=3662 GN=LOC111433518 PE=3 SV=1)

HSP 1 Score: 441 bits (1135), Expect = 2.11e-150
Identity = 219/225 (97.33%), Postives = 221/225 (98.22%), Query Frame = 0

Query: 25  TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
           TFSTQTFPENHLSFILRKCISLLQLCGSS+SKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12  TFSTQTFPENHLSFILRKCISLLQLCGSSRSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71

Query: 85  VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
           VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72  VSISAPMTYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131

Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
           FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191

Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM  +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 236

BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match: A0A6J1KRZ9 (pentatricopeptide repeat-containing protein At4g21065 OS=Cucurbita maxima OX=3661 GN=LOC111496722 PE=3 SV=1)

HSP 1 Score: 439 bits (1130), Expect = 1.21e-149
Identity = 218/225 (96.89%), Postives = 220/225 (97.78%), Query Frame = 0

Query: 25  TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
           TFSTQTFPENHLSFILR CISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12  TFSTQTFPENHLSFILRNCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71

Query: 85  VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
           VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72  VSISAPMSYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131

Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
           FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191

Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGV+PDGFTM  +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVKPDGFTMVSL 236

BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match: A0A5A7UEB3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009420 PE=3 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 3.44e-132
Identity = 192/223 (86.10%), Postives = 208/223 (93.27%), Query Frame = 0

Query: 27  STQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVS 86
           S+Q+FP++ LSFILRKCISL+QLCGSSQSKLKQ+HAFSIRHGVPP NPDFNKHLIF+LVS
Sbjct: 20  SSQSFPDSPLSFILRKCISLVQLCGSSQSKLKQVHAFSIRHGVPPQNPDFNKHLIFALVS 79

Query: 87  ISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFP 146
           +SAPM +A RIF QIQAPNIFTWNTM+RGFAESENP PAVEL+SQMHAASSI PDTHTFP
Sbjct: 80  LSAPMSFAARIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFP 139

Query: 147 FLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSER 206
           FLFKAVAKLMD RLGE IHS+VVRNGFDSL FVQNSLVHMYSVFGFAESAY+VFE MS+R
Sbjct: 140 FLFKAVAKLMDVRLGEAIHSVVVRNGFDSLLFVQNSLVHMYSVFGFAESAYQVFEIMSDR 199

Query: 207 DLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           DLVAWNSVINGFALNGM NEALTLF+EMGS GVEPDGFTM  +
Sbjct: 200 DLVAWNSVINGFALNGMPNEALTLFREMGSEGVEPDGFTMVSL 242

BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match: A0A1S3AZ16 (pentatricopeptide repeat-containing protein At4g21065 OS=Cucumis melo OX=3656 GN=LOC103484330 PE=3 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 3.44e-132
Identity = 192/223 (86.10%), Postives = 208/223 (93.27%), Query Frame = 0

Query: 27  STQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVS 86
           S+Q+FP++ LSFILRKCISL+QLCGSSQSKLKQ+HAFSIRHGVPP NPDFNKHLIF+LVS
Sbjct: 20  SSQSFPDSPLSFILRKCISLVQLCGSSQSKLKQVHAFSIRHGVPPQNPDFNKHLIFALVS 79

Query: 87  ISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFP 146
           +SAPM +A RIF QIQAPNIFTWNTM+RGFAESENP PAVEL+SQMHAASSI PDTHTFP
Sbjct: 80  LSAPMSFAARIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFP 139

Query: 147 FLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSER 206
           FLFKAVAKLMD RLGE IHS+VVRNGFDSL FVQNSLVHMYSVFGFAESAY+VFE MS+R
Sbjct: 140 FLFKAVAKLMDVRLGEAIHSVVVRNGFDSLLFVQNSLVHMYSVFGFAESAYQVFEIMSDR 199

Query: 207 DLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           DLVAWNSVINGFALNGM NEALTLF+EMGS GVEPDGFTM  +
Sbjct: 200 DLVAWNSVINGFALNGMPNEALTLFREMGSEGVEPDGFTMVSL 242

BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match: A0A0A0KKT5 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525310 PE=3 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 4.59e-130
Identity = 191/223 (85.65%), Postives = 205/223 (91.93%), Query Frame = 0

Query: 27  STQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVS 86
           S+Q F + HLSFILRKCISL+QLCGSSQSKLKQIHAFSIRHGVPP NPDFNKHLIF+LVS
Sbjct: 21  SSQNFLDCHLSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVS 80

Query: 87  ISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFP 146
           +SAPM +A +IF QIQAPNIFTWNTM+RGFAESENP PAVEL+SQMHAASSI PDTHTFP
Sbjct: 81  LSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFP 140

Query: 147 FLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSER 206
           FLFKAVAKLMD  LGEGIHS+VVRNGFDSLRFVQNSLVHMYSVFGFAESAY+VFE MS R
Sbjct: 141 FLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYR 200

Query: 207 DLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
           D VAWNSVINGFALNGM NEALTL++EMGS GVEPDGFTM  +
Sbjct: 201 DRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSL 243

BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 3.6e-63
Identity = 120/215 (55.81%), Postives = 157/215 (73.02%), Query Frame = 0

Query: 39  ILRKCISLLQLCG-SSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVSISA--PMFYAT 98
           ++ KCI+LLQ  G SS +KL+QIHAFSIRHGV   + +  KHLIF LVS+ +  PM YA 
Sbjct: 14  MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73

Query: 99  RIFQQIQAP-NIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFPFLFKAVAK 158
           ++F +I+ P N+F WNT++RG+AE  N   A  LY +M  +  ++PDTHT+PFL KAV  
Sbjct: 74  KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133

Query: 159 LMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSERDLVAWNSV 218
           + D RLGE IHS+V+R+GF SL +VQNSL+H+Y+  G   SAYKVF+ M E+DLVAWNSV
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 193

Query: 219 INGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
           INGFA NG   EAL L+ EM S G++PDGFT+  +
Sbjct: 194 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228

BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 145.2 bits (365), Expect = 7.0e-35
Identity = 83/231 (35.93%), Postives = 124/231 (53.68%), Query Frame = 0

Query: 22  KHRTFSTQTFP------ENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPD 81
           +H  FS    P        H+S ++ +C+SL Q        LKQ H   IR G       
Sbjct: 14  RHPNFSNPNQPTTNNERSRHIS-LIERCVSLRQ--------LKQTHGHMIRTGTFSDPYS 73

Query: 82  FNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAA 141
            +K    + +S  A + YA ++F +I  PN F WNT++R +A   +P  ++  +  M + 
Sbjct: 74  ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 133

Query: 142 SSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAES 201
           S   P+ +TFPFL KA A++    LG+ +H + V++   S  FV NSL+H Y   G  +S
Sbjct: 134 SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDS 193

Query: 202 AYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM 247
           A KVF  + E+D+V+WNS+INGF   G  ++AL LFK+M S  V+    TM
Sbjct: 194 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235

BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-32
Identity = 86/223 (38.57%), Postives = 125/223 (56.05%), Query Frame = 0

Query: 27  STQTFP-ENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLV 86
           ST +F   N L  +L KC  LL         LKQI A  I +G+       ++ + F  +
Sbjct: 46  STHSFVLHNPLLSLLEKCKLLLH--------LKQIQAQMIINGLILDPFASSRLIAFCAL 105

Query: 87  SISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQM--HAASSIQPDTH 146
           S S  + Y+ +I + I+ PNIF+WN  +RGF+ESENP+ +  LY QM  H     +PD  
Sbjct: 106 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 165

Query: 147 TFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFM 206
           T+P LFK  A L  + LG  I   V++   + +  V N+ +HM++  G  E+A KVF+  
Sbjct: 166 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 225

Query: 207 SERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM 247
             RDLV+WN +ING+   G A +A+ ++K M S GV+PD  TM
Sbjct: 226 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260

BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31
Identity = 80/211 (37.91%), Postives = 115/211 (54.50%), Query Frame = 0

Query: 41  RKCISLLQLCGSSQSKLKQIHAFSIRHGVP-PPNPDFNKHLIFSLVSISAPMFYATRIFQ 100
           ++  SL + C S  S+LKQ+HAF++R   P  P   F    I  L S  + + YA R+F 
Sbjct: 49  QRIFSLAETC-SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 108

Query: 101 QIQAPNIFTWNTMVRGFA-ESENPRPAVELYSQMHAASSIQPDTHTFPFLFKAVAKLMDA 160
            I+  + F WNT++R  A +      A  LY +M       PD HTFPF+ KA A +   
Sbjct: 109 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 168

Query: 161 RLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSERDLVAWNSVINGF 220
             G+ +H  +V++GF    +V N L+H+Y   G  + A KVF+ M ER LV+WNS+I+  
Sbjct: 169 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 228

Query: 221 ALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
              G  + AL LF+EM     EPDG+TM  +
Sbjct: 229 VRFGEYDSALQLFREM-QRSFEPDGYTMQSV 257

BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 6.1e-31
Identity = 78/230 (33.91%), Postives = 122/230 (53.04%), Query Frame = 0

Query: 52  SSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNT 111
           S+  +LKQIHA  I+ G+       ++ L F   S S  M YA  +F +I   N F WNT
Sbjct: 36  STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNT 95

Query: 112 MVRGFAESENPRPAVELYSQMHAAS-SIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVR 171
           ++RGF+ S  P  A+ ++  M  +S S++P   T+P +FKA  +L  AR G  +H +V++
Sbjct: 96  IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 155

Query: 172 NGFDSLRFVQNSLVHMY--------------------------SVFGFA-----ESAYKV 231
            G +   F++N+++HMY                           + GFA     + A  +
Sbjct: 156 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 215

Query: 232 FEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
           F+ M +R+ V+WNS+I+GF  NG   +AL +F+EM    V+PDGFTM  +
Sbjct: 216 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A8MQA35.0e-6255.81Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
O823809.9e-3435.93Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9SJZ34.6e-3138.57Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
Q0WQW52.3e-3037.91Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
Q9SJG68.6e-3033.91Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_023517386.11.32e-16198.72pentatricopeptide repeat-containing protein At4g21065 [Cucurbita pepo subsp. pep... [more]
XP_022926338.14.36e-15097.33pentatricopeptide repeat-containing protein At4g21065 [Cucurbita moschata][more]
XP_023002974.12.49e-14996.89pentatricopeptide repeat-containing protein At4g21065 [Cucurbita maxima][more]
KAG7026439.17.11e-14197.78Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6594433.12.18e-14097.33Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
A0A6J1EHS22.11e-15097.33pentatricopeptide repeat-containing protein At4g21065 OS=Cucurbita moschata OX=3... [more]
A0A6J1KRZ91.21e-14996.89pentatricopeptide repeat-containing protein At4g21065 OS=Cucurbita maxima OX=366... [more]
A0A5A7UEB33.44e-13286.10Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AZ163.44e-13286.10pentatricopeptide repeat-containing protein At4g21065 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0KKT54.59e-13085.65DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G5253... [more]
Match NameE-valueIdentityDescription
AT4G21065.13.6e-6355.81Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.17.0e-3535.93Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G22410.13.3e-3238.57SLOW GROWTH 1 [more]
AT1G59720.11.6e-3137.91Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G42920.16.1e-3133.91Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 104..154
e-value: 2.4E-10
score: 40.5
coord: 207..248
e-value: 1.4E-9
score: 38.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 107..141
e-value: 9.3E-5
score: 20.4
coord: 209..242
e-value: 4.0E-8
score: 30.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 105..139
score: 9.185627
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 207..241
score: 12.254791
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 31..154
e-value: 2.6E-9
score: 38.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 164..249
e-value: 1.5E-16
score: 62.2
NoneNo IPR availablePANTHERPTHR47926:SF70PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 49..247
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 49..247

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g05860.1Cp4.1LG19g05860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding