Homology
BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 239.2 bits (609), Expect = 5.0e-62
Identity = 120/215 (55.81%), Postives = 157/215 (73.02%), Query Frame = 0
Query: 39 ILRKCISLLQLCG-SSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVSISA--PMFYAT 98
++ KCI+LLQ G SS +KL+QIHAFSIRHGV + + KHLIF LVS+ + PM YA
Sbjct: 14 MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73
Query: 99 RIFQQIQAP-NIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFPFLFKAVAK 158
++F +I+ P N+F WNT++RG+AE N A LY +M + ++PDTHT+PFL KAV
Sbjct: 74 KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133
Query: 159 LMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSERDLVAWNSV 218
+ D RLGE IHS+V+R+GF SL +VQNSL+H+Y+ G SAYKVF+ M E+DLVAWNSV
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 193
Query: 219 INGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
INGFA NG EAL L+ EM S G++PDGFT+ +
Sbjct: 194 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228
BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 9.9e-34
Identity = 83/231 (35.93%), Postives = 124/231 (53.68%), Query Frame = 0
Query: 22 KHRTFSTQTFP------ENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPD 81
+H FS P H+S ++ +C+SL Q LKQ H IR G
Sbjct: 14 RHPNFSNPNQPTTNNERSRHIS-LIERCVSLRQ--------LKQTHGHMIRTGTFSDPYS 73
Query: 82 FNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAA 141
+K + +S A + YA ++F +I PN F WNT++R +A +P ++ + M +
Sbjct: 74 ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 133
Query: 142 SSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAES 201
S P+ +TFPFL KA A++ LG+ +H + V++ S FV NSL+H Y G +S
Sbjct: 134 SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDS 193
Query: 202 AYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM 247
A KVF + E+D+V+WNS+INGF G ++AL LFK+M S V+ TM
Sbjct: 194 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 4.6e-31
Identity = 86/223 (38.57%), Postives = 125/223 (56.05%), Query Frame = 0
Query: 27 STQTFP-ENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLV 86
ST +F N L +L KC LL LKQI A I +G+ ++ + F +
Sbjct: 46 STHSFVLHNPLLSLLEKCKLLLH--------LKQIQAQMIINGLILDPFASSRLIAFCAL 105
Query: 87 SISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQM--HAASSIQPDTH 146
S S + Y+ +I + I+ PNIF+WN +RGF+ESENP+ + LY QM H +PD
Sbjct: 106 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 165
Query: 147 TFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFM 206
T+P LFK A L + LG I V++ + + V N+ +HM++ G E+A KVF+
Sbjct: 166 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 225
Query: 207 SERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM 247
RDLV+WN +ING+ G A +A+ ++K M S GV+PD TM
Sbjct: 226 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match:
Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)
HSP 1 Score: 134.0 bits (336), Expect = 2.3e-30
Identity = 80/211 (37.91%), Postives = 115/211 (54.50%), Query Frame = 0
Query: 41 RKCISLLQLCGSSQSKLKQIHAFSIRHGVP-PPNPDFNKHLIFSLVSISAPMFYATRIFQ 100
++ SL + C S S+LKQ+HAF++R P P F I L S + + YA R+F
Sbjct: 49 QRIFSLAETC-SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 108
Query: 101 QIQAPNIFTWNTMVRGFA-ESENPRPAVELYSQMHAASSIQPDTHTFPFLFKAVAKLMDA 160
I+ + F WNT++R A + A LY +M PD HTFPF+ KA A +
Sbjct: 109 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 168
Query: 161 RLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSERDLVAWNSVINGF 220
G+ +H +V++GF +V N L+H+Y G + A KVF+ M ER LV+WNS+I+
Sbjct: 169 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 228
Query: 221 ALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
G + AL LF+EM EPDG+TM +
Sbjct: 229 VRFGEYDSALQLFREM-QRSFEPDGYTMQSV 257
BLAST of Cp4.1LG19g05860 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 8.6e-30
Identity = 78/230 (33.91%), Postives = 122/230 (53.04%), Query Frame = 0
Query: 52 SSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNT 111
S+ +LKQIHA I+ G+ ++ L F S S M YA +F +I N F WNT
Sbjct: 36 STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNT 95
Query: 112 MVRGFAESENPRPAVELYSQMHAAS-SIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVR 171
++RGF+ S P A+ ++ M +S S++P T+P +FKA +L AR G +H +V++
Sbjct: 96 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 155
Query: 172 NGFDSLRFVQNSLVHMY--------------------------SVFGFA-----ESAYKV 231
G + F++N+++HMY + GFA + A +
Sbjct: 156 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 215
Query: 232 FEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
F+ M +R+ V+WNS+I+GF NG +AL +F+EM V+PDGFTM +
Sbjct: 216 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match:
XP_023517386.1 (pentatricopeptide repeat-containing protein At4g21065 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 471 bits (1211), Expect = 1.32e-161
Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 0
Query: 15 MFRCAQTKHRTFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNP 74
MFRCAQTKHRTFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNP
Sbjct: 1 MFRCAQTKHRTFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNP 60
Query: 75 DFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHA 134
DFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHA
Sbjct: 61 DFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHA 120
Query: 135 ASSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAE 194
ASSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAE
Sbjct: 121 ASSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAE 180
Query: 195 SAYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
SAYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM +
Sbjct: 181 SAYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 235
BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match:
XP_022926338.1 (pentatricopeptide repeat-containing protein At4g21065 [Cucurbita moschata])
HSP 1 Score: 441 bits (1135), Expect = 4.36e-150
Identity = 219/225 (97.33%), Postives = 221/225 (98.22%), Query Frame = 0
Query: 25 TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
TFSTQTFPENHLSFILRKCISLLQLCGSS+SKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12 TFSTQTFPENHLSFILRKCISLLQLCGSSRSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71
Query: 85 VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72 VSISAPMTYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131
Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191
Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 236
BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match:
XP_023002974.1 (pentatricopeptide repeat-containing protein At4g21065 [Cucurbita maxima])
HSP 1 Score: 439 bits (1130), Expect = 2.49e-149
Identity = 218/225 (96.89%), Postives = 220/225 (97.78%), Query Frame = 0
Query: 25 TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
TFSTQTFPENHLSFILR CISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12 TFSTQTFPENHLSFILRNCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71
Query: 85 VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72 VSISAPMSYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131
Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191
Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGV+PDGFTM +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVKPDGFTMVSL 236
BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match:
KAG7026439.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 443 bits (1139), Expect = 7.11e-141
Identity = 220/225 (97.78%), Postives = 221/225 (98.22%), Query Frame = 0
Query: 25 TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12 TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71
Query: 85 VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72 VSISAPMSYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131
Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191
Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 236
BLAST of Cp4.1LG19g05860 vs. NCBI nr
Match:
KAG6594433.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 442 bits (1136), Expect = 2.18e-140
Identity = 219/225 (97.33%), Postives = 221/225 (98.22%), Query Frame = 0
Query: 25 TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12 TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71
Query: 85 VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
VSISAPM YATRIFQQIQAPNIFTWNTMVRGF+ESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72 VSISAPMSYATRIFQQIQAPNIFTWNTMVRGFSESENPRPAVELYSQMHAASSIQPDTHT 131
Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191
Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 236
BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match:
A0A6J1EHS2 (pentatricopeptide repeat-containing protein At4g21065 OS=Cucurbita moschata OX=3662 GN=LOC111433518 PE=3 SV=1)
HSP 1 Score: 441 bits (1135), Expect = 2.11e-150
Identity = 219/225 (97.33%), Postives = 221/225 (98.22%), Query Frame = 0
Query: 25 TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
TFSTQTFPENHLSFILRKCISLLQLCGSS+SKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12 TFSTQTFPENHLSFILRKCISLLQLCGSSRSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71
Query: 85 VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72 VSISAPMTYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131
Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191
Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMVSL 236
BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match:
A0A6J1KRZ9 (pentatricopeptide repeat-containing protein At4g21065 OS=Cucurbita maxima OX=3661 GN=LOC111496722 PE=3 SV=1)
HSP 1 Score: 439 bits (1130), Expect = 1.21e-149
Identity = 218/225 (96.89%), Postives = 220/225 (97.78%), Query Frame = 0
Query: 25 TFSTQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 84
TFSTQTFPENHLSFILR CISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL
Sbjct: 12 TFSTQTFPENHLSFILRNCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSL 71
Query: 85 VSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 144
VSISAPM YATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT
Sbjct: 72 VSISAPMSYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHT 131
Query: 145 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMS 204
FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSL FVQNSLVHMYSVFGFAESAYKVFEFMS
Sbjct: 132 FPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLLFVQNSLVHMYSVFGFAESAYKVFEFMS 191
Query: 205 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGV+PDGFTM +
Sbjct: 192 ERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVKPDGFTMVSL 236
BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match:
A0A5A7UEB3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009420 PE=3 SV=1)
HSP 1 Score: 395 bits (1015), Expect = 3.44e-132
Identity = 192/223 (86.10%), Postives = 208/223 (93.27%), Query Frame = 0
Query: 27 STQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVS 86
S+Q+FP++ LSFILRKCISL+QLCGSSQSKLKQ+HAFSIRHGVPP NPDFNKHLIF+LVS
Sbjct: 20 SSQSFPDSPLSFILRKCISLVQLCGSSQSKLKQVHAFSIRHGVPPQNPDFNKHLIFALVS 79
Query: 87 ISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFP 146
+SAPM +A RIF QIQAPNIFTWNTM+RGFAESENP PAVEL+SQMHAASSI PDTHTFP
Sbjct: 80 LSAPMSFAARIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFP 139
Query: 147 FLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSER 206
FLFKAVAKLMD RLGE IHS+VVRNGFDSL FVQNSLVHMYSVFGFAESAY+VFE MS+R
Sbjct: 140 FLFKAVAKLMDVRLGEAIHSVVVRNGFDSLLFVQNSLVHMYSVFGFAESAYQVFEIMSDR 199
Query: 207 DLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
DLVAWNSVINGFALNGM NEALTLF+EMGS GVEPDGFTM +
Sbjct: 200 DLVAWNSVINGFALNGMPNEALTLFREMGSEGVEPDGFTMVSL 242
BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match:
A0A1S3AZ16 (pentatricopeptide repeat-containing protein At4g21065 OS=Cucumis melo OX=3656 GN=LOC103484330 PE=3 SV=1)
HSP 1 Score: 395 bits (1015), Expect = 3.44e-132
Identity = 192/223 (86.10%), Postives = 208/223 (93.27%), Query Frame = 0
Query: 27 STQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVS 86
S+Q+FP++ LSFILRKCISL+QLCGSSQSKLKQ+HAFSIRHGVPP NPDFNKHLIF+LVS
Sbjct: 20 SSQSFPDSPLSFILRKCISLVQLCGSSQSKLKQVHAFSIRHGVPPQNPDFNKHLIFALVS 79
Query: 87 ISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFP 146
+SAPM +A RIF QIQAPNIFTWNTM+RGFAESENP PAVEL+SQMHAASSI PDTHTFP
Sbjct: 80 LSAPMSFAARIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFP 139
Query: 147 FLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSER 206
FLFKAVAKLMD RLGE IHS+VVRNGFDSL FVQNSLVHMYSVFGFAESAY+VFE MS+R
Sbjct: 140 FLFKAVAKLMDVRLGEAIHSVVVRNGFDSLLFVQNSLVHMYSVFGFAESAYQVFEIMSDR 199
Query: 207 DLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
DLVAWNSVINGFALNGM NEALTLF+EMGS GVEPDGFTM +
Sbjct: 200 DLVAWNSVINGFALNGMPNEALTLFREMGSEGVEPDGFTMVSL 242
BLAST of Cp4.1LG19g05860 vs. ExPASy TrEMBL
Match:
A0A0A0KKT5 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525310 PE=3 SV=1)
HSP 1 Score: 390 bits (1001), Expect = 4.59e-130
Identity = 191/223 (85.65%), Postives = 205/223 (91.93%), Query Frame = 0
Query: 27 STQTFPENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVS 86
S+Q F + HLSFILRKCISL+QLCGSSQSKLKQIHAFSIRHGVPP NPDFNKHLIF+LVS
Sbjct: 21 SSQNFLDCHLSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVS 80
Query: 87 ISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFP 146
+SAPM +A +IF QIQAPNIFTWNTM+RGFAESENP PAVEL+SQMHAASSI PDTHTFP
Sbjct: 81 LSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFP 140
Query: 147 FLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSER 206
FLFKAVAKLMD LGEGIHS+VVRNGFDSLRFVQNSLVHMYSVFGFAESAY+VFE MS R
Sbjct: 141 FLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYR 200
Query: 207 DLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 249
D VAWNSVINGFALNGM NEALTL++EMGS GVEPDGFTM +
Sbjct: 201 DRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSL 243
BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 239.2 bits (609), Expect = 3.6e-63
Identity = 120/215 (55.81%), Postives = 157/215 (73.02%), Query Frame = 0
Query: 39 ILRKCISLLQLCG-SSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVSISA--PMFYAT 98
++ KCI+LLQ G SS +KL+QIHAFSIRHGV + + KHLIF LVS+ + PM YA
Sbjct: 14 MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73
Query: 99 RIFQQIQAP-NIFTWNTMVRGFAESENPRPAVELYSQMHAASSIQPDTHTFPFLFKAVAK 158
++F +I+ P N+F WNT++RG+AE N A LY +M + ++PDTHT+PFL KAV
Sbjct: 74 KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133
Query: 159 LMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSERDLVAWNSV 218
+ D RLGE IHS+V+R+GF SL +VQNSL+H+Y+ G SAYKVF+ M E+DLVAWNSV
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 193
Query: 219 INGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
INGFA NG EAL L+ EM S G++PDGFT+ +
Sbjct: 194 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228
BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 145.2 bits (365), Expect = 7.0e-35
Identity = 83/231 (35.93%), Postives = 124/231 (53.68%), Query Frame = 0
Query: 22 KHRTFSTQTFP------ENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPD 81
+H FS P H+S ++ +C+SL Q LKQ H IR G
Sbjct: 14 RHPNFSNPNQPTTNNERSRHIS-LIERCVSLRQ--------LKQTHGHMIRTGTFSDPYS 73
Query: 82 FNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQMHAA 141
+K + +S A + YA ++F +I PN F WNT++R +A +P ++ + M +
Sbjct: 74 ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 133
Query: 142 SSIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAES 201
S P+ +TFPFL KA A++ LG+ +H + V++ S FV NSL+H Y G +S
Sbjct: 134 SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDS 193
Query: 202 AYKVFEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM 247
A KVF + E+D+V+WNS+INGF G ++AL LFK+M S V+ TM
Sbjct: 194 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 136.3 bits (342), Expect = 3.3e-32
Identity = 86/223 (38.57%), Postives = 125/223 (56.05%), Query Frame = 0
Query: 27 STQTFP-ENHLSFILRKCISLLQLCGSSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLV 86
ST +F N L +L KC LL LKQI A I +G+ ++ + F +
Sbjct: 46 STHSFVLHNPLLSLLEKCKLLLH--------LKQIQAQMIINGLILDPFASSRLIAFCAL 105
Query: 87 SISAPMFYATRIFQQIQAPNIFTWNTMVRGFAESENPRPAVELYSQM--HAASSIQPDTH 146
S S + Y+ +I + I+ PNIF+WN +RGF+ESENP+ + LY QM H +PD
Sbjct: 106 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 165
Query: 147 TFPFLFKAVAKLMDARLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFM 206
T+P LFK A L + LG I V++ + + V N+ +HM++ G E+A KVF+
Sbjct: 166 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 225
Query: 207 SERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTM 247
RDLV+WN +ING+ G A +A+ ++K M S GV+PD TM
Sbjct: 226 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match:
AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31
Identity = 80/211 (37.91%), Postives = 115/211 (54.50%), Query Frame = 0
Query: 41 RKCISLLQLCGSSQSKLKQIHAFSIRHGVP-PPNPDFNKHLIFSLVSISAPMFYATRIFQ 100
++ SL + C S S+LKQ+HAF++R P P F I L S + + YA R+F
Sbjct: 49 QRIFSLAETC-SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 108
Query: 101 QIQAPNIFTWNTMVRGFA-ESENPRPAVELYSQMHAASSIQPDTHTFPFLFKAVAKLMDA 160
I+ + F WNT++R A + A LY +M PD HTFPF+ KA A +
Sbjct: 109 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 168
Query: 161 RLGEGIHSIVVRNGFDSLRFVQNSLVHMYSVFGFAESAYKVFEFMSERDLVAWNSVINGF 220
G+ +H +V++GF +V N L+H+Y G + A KVF+ M ER LV+WNS+I+
Sbjct: 169 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 228
Query: 221 ALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
G + AL LF+EM EPDG+TM +
Sbjct: 229 VRFGEYDSALQLFREM-QRSFEPDGYTMQSV 257
BLAST of Cp4.1LG19g05860 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 132.1 bits (331), Expect = 6.1e-31
Identity = 78/230 (33.91%), Postives = 122/230 (53.04%), Query Frame = 0
Query: 52 SSQSKLKQIHAFSIRHGVPPPNPDFNKHLIFSLVSISAPMFYATRIFQQIQAPNIFTWNT 111
S+ +LKQIHA I+ G+ ++ L F S S M YA +F +I N F WNT
Sbjct: 36 STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNT 95
Query: 112 MVRGFAESENPRPAVELYSQMHAAS-SIQPDTHTFPFLFKAVAKLMDARLGEGIHSIVVR 171
++RGF+ S P A+ ++ M +S S++P T+P +FKA +L AR G +H +V++
Sbjct: 96 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 155
Query: 172 NGFDSLRFVQNSLVHMY--------------------------SVFGFA-----ESAYKV 231
G + F++N+++HMY + GFA + A +
Sbjct: 156 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 215
Query: 232 FEFMSERDLVAWNSVINGFALNGMANEALTLFKEMGSVGVEPDGFTMTCI 250
F+ M +R+ V+WNS+I+GF NG +AL +F+EM V+PDGFTM +
Sbjct: 216 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A8MQA3 | 5.0e-62 | 55.81 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 9.9e-34 | 35.93 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9SJZ3 | 4.6e-31 | 38.57 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
Q0WQW5 | 2.3e-30 | 37.91 | Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
Q9SJG6 | 8.6e-30 | 33.91 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
XP_023517386.1 | 1.32e-161 | 98.72 | pentatricopeptide repeat-containing protein At4g21065 [Cucurbita pepo subsp. pep... | [more] |
XP_022926338.1 | 4.36e-150 | 97.33 | pentatricopeptide repeat-containing protein At4g21065 [Cucurbita moschata] | [more] |
XP_023002974.1 | 2.49e-149 | 96.89 | pentatricopeptide repeat-containing protein At4g21065 [Cucurbita maxima] | [more] |
KAG7026439.1 | 7.11e-141 | 97.78 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6594433.1 | 2.18e-140 | 97.33 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EHS2 | 2.11e-150 | 97.33 | pentatricopeptide repeat-containing protein At4g21065 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1KRZ9 | 1.21e-149 | 96.89 | pentatricopeptide repeat-containing protein At4g21065 OS=Cucurbita maxima OX=366... | [more] |
A0A5A7UEB3 | 3.44e-132 | 86.10 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3AZ16 | 3.44e-132 | 86.10 | pentatricopeptide repeat-containing protein At4g21065 OS=Cucumis melo OX=3656 GN... | [more] |
A0A0A0KKT5 | 4.59e-130 | 85.65 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G5253... | [more] |