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Cp4.1LG19g05730 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAGGATTGGACCCTTCGTCCCCCAAGGCATCAACGCACCCCATACGCACCCACGTGCCACAGAGATCTTGACCCTTCTCGTGGGCACCCTGCTTGTAGGGTTTGTGTCCTCGAACCAAGACGGCAACCGGCTCTTCTCCAAGGTCCTATACAAAGGGGACGTGTTTGTTTTCCCAGAGGGTATGGGAACGCAGTGGCGATTGCAGCCCTGAGCAGCCAAAACGCAGGCGTTATCACCATTGGAGATACTGTGTTTGGATCCGAACCAGCCATCCCAATTGGTATTTTGGCGAAGGCATTCCAGACTCATGCGCACATCATTGCTGCCATTCAAGCCACGTTCTGAACTCAATTCCACAGACTTTACTTTTTAATAAATCTAATTTTTGTTGTGTGTGGACAATGCTTTTGGGATTTTGGTGTGTTTCATTTGTATTTGGATTTTACTCTTCACTAAGAATTATTAAATAAAACGGCCAAGTCTGGTGAATTATTTCTCTAGATATTAGGCGGTGTGCTAGTAAGTACGTTGGGTTCCATGAACCGTGTGCCAGGGTCATTAACTATCATAATCTCAATCGGCTAAGAGATCCTCTAATAGTTACTACGCACAATATTCTCATATCACCACATATTATAAATAGTGTAGCACAACCCTCTTATCTATTATTGATACAAATGTGGGTACTAACGAATGTAGGCTATAATCAAGGTAAATAGTGGAAAATACCGTACATGCTTTTCTAAAAATTGCGTATAGCATATTTAAAAAAAAAAAAAAATGCAAAAATACTATAAATAGACATTATTCTGTTAGCGTTGGAAACTAAGTTCAGCCGTCCATCCATTATTGAAATGTTTCCAAGTGATCTATAAATACAGCTTCTTTATGTTCTTCTCAATTCATCCACACAATTCAAAGCCAAAGCATATCTAGCCCGCTTTGGTCTCTCTCCTACTTTTTGTGAAGATCAGCTCATCATGGCCGCCCCACTTTTCTTTCTCACGCTCCTGGCTATAACTTGTTCTGTTGCACGGGCATCCGATCCAACCCCACTTCAAGACTTCTGTGTTGCAGATCTCAACAGTCCTGGTAAGCATTCTAAATATATATATATATATATATATATGTGTGTATATGTGCATATTTGGACATTGATGATGCTTGTTTCACTGTGACACAGTGAAAGTGAATGGCCTAGTTTGCAAGGATCCCAAGCTTGTGGAACCCAAAGACTTCTTCGGGAGTGGATTGAGTGTAGCAGCAGACGTAAACAACTCTGCTGGCTCCCAAGCAACTCCCGTCGGTGTTGCCCAAATCCCAGGGCTCAACACTCTCGGCATCTCCCTGGTTCGCTTTGACTTCGCCCCACACGGCATCATCGCTCCCCACACGCACCCTCGCGCCACCGAAATCTTGACAGTCCTCGAAGGCACCGTCCTGGCCGGCTTCGTCACCTCCATCCCGGATAACCGTCTGATAACCAAGACGTTGAACAAGGGCGACGTGTTCGTGTTTCCTGTGGGTCTCATTCACTTCCTACAGAATGTCGGGAAGGGCCATGCAGTTGCCCTTGCAGCTTTGAACAGCCAAAACCCAGGTGTTATTCCCATTGCAAATTCAGTTTTTGGATCACACCCGGACATCCCCACCGATATCCTTGCAAAGGCCTTCCAAACCGATGCCGCTATTATAGCCAACATTCAGGCCAAGTTTTAG ATGTTCAGGATTGGACCCTTCGTCCCCCAAGGCATCAACGCACCCCATACGCACCCACGTGCCACAGAGATCTTGACCCTTCTCGTGGGCACCCTGCTTGTAGGAGGGTATGGGAACGCAGTGGCGATTGCAGCCCTGAGCAGCCAAAACGCAGGCGTTATCACCATTGGAGATACTGTGTTTGGATCCGAACCAGCCATCCCAATTGCAGACGTAAACAACTCTGCTGGCTCCCAAGCAACTCCCGTCGGTGTTGCCCAAATCCCAGGGCTCAACACTCTCGGCATCTCCCTGGTTCGCTTTGACTTCGCCCCACACGGCATCATCGCTCCCCACACGCACCCTCGCGCCACCGAAATCTTGACAGTCCTCGAAGGCACCGTCCTGGCCGGCTTCGTCACCTCCATCCCGGATAACCGTCTGATAACCAAGACGTTGAACAAGGGCGACGTGTTCGTGTTTCCTGTGGGTCTCATTCACTTCCTACAGAATGTCGGGAAGGGCCATGCAGTTGCCCTTGCAGCTTTGAACAGCCAAAACCCAGGTGTTATTCCCATTGCAAATTCAGTTTTTGGATCACACCCGGACATCCCCACCGATATCCTTGCAAAGGCCTTCCAAACCGATGCCGCTATTATAGCCAACATTCAGGCCAAGTTTTAG ATGTTCAGGATTGGACCCTTCGTCCCCCAAGGCATCAACGCACCCCATACGCACCCACGTGCCACAGAGATCTTGACCCTTCTCGTGGGCACCCTGCTTGTAGGAGGGTATGGGAACGCAGTGGCGATTGCAGCCCTGAGCAGCCAAAACGCAGGCGTTATCACCATTGGAGATACTGTGTTTGGATCCGAACCAGCCATCCCAATTGCAGACGTAAACAACTCTGCTGGCTCCCAAGCAACTCCCGTCGGTGTTGCCCAAATCCCAGGGCTCAACACTCTCGGCATCTCCCTGGTTCGCTTTGACTTCGCCCCACACGGCATCATCGCTCCCCACACGCACCCTCGCGCCACCGAAATCTTGACAGTCCTCGAAGGCACCGTCCTGGCCGGCTTCGTCACCTCCATCCCGGATAACCGTCTGATAACCAAGACGTTGAACAAGGGCGACGTGTTCGTGTTTCCTGTGGGTCTCATTCACTTCCTACAGAATGTCGGGAAGGGCCATGCAGTTGCCCTTGCAGCTTTGAACAGCCAAAACCCAGGTGTTATTCCCATTGCAAATTCAGTTTTTGGATCACACCCGGACATCCCCACCGATATCCTTGCAAAGGCCTTCCAAACCGATGCCGCTATTATAGCCAACATTCAGGCCAAGTTTTAG MFRIGPFVPQGINAPHTHPRATEILTLLVGTLLVGGYGNAVAIAALSSQNAGVITIGDTVFGSEPAIPIADVNNSAGSQATPVGVAQIPGLNTLGISLVRFDFAPHGIIAPHTHPRATEILTVLEGTVLAGFVTSIPDNRLITKTLNKGDVFVFPVGLIHFLQNVGKGHAVALAALNSQNPGVIPIANSVFGSHPDIPTDILAKAFQTDAAIIANIQAKF Homology
BLAST of Cp4.1LG19g05730 vs. ExPASy Swiss-Prot
Match: Q6K5P8 (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491800 PE=3 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.1e-49 Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. ExPASy Swiss-Prot
Match: Q6K5P9 (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491700 PE=3 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.5e-49 Identity = 99/150 (66.00%), Postives = 115/150 (76.67%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. ExPASy Swiss-Prot
Match: Q6YZA9 (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica OX=39947 GN=GER3 PE=2 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.3e-48 Identity = 102/151 (67.55%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. ExPASy Swiss-Prot
Match: Q6K5Q0 (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491600 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 6.2e-48 Identity = 103/180 (57.22%), Postives = 124/180 (68.89%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. ExPASy Swiss-Prot
Match: P92999 (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana OX=3702 GN=GLP2A PE=2 SV=2) HSP 1 Score: 184.9 bits (468), Expect = 9.9e-46 Identity = 93/151 (61.59%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. NCBI nr
Match: XP_023518434.1 (putative germin-like protein 2-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305 bits (780), Expect = 2.99e-102 Identity = 154/160 (96.25%), Postives = 156/160 (97.50%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. NCBI nr
Match: XP_022926685.1 (putative germin-like protein 2-1 [Cucurbita moschata]) HSP 1 Score: 303 bits (776), Expect = 1.21e-101 Identity = 153/160 (95.62%), Postives = 155/160 (96.88%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. NCBI nr
Match: KAG6594415.1 (putative germin-like protein 2-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 301 bits (772), Expect = 4.93e-101 Identity = 152/160 (95.00%), Postives = 154/160 (96.25%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. NCBI nr
Match: XP_023003954.1 (putative germin-like protein 2-3 [Cucurbita maxima]) HSP 1 Score: 291 bits (746), Expect = 1.01e-96 Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. NCBI nr
Match: KAG6583647.1 (putative germin-like protein 2-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 261 bits (668), Expect = 3.24e-85 Identity = 128/151 (84.77%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. ExPASy TrEMBL
Match: A0A6J1ELU4 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433742 PE=3 SV=1) HSP 1 Score: 303 bits (776), Expect = 5.88e-102 Identity = 153/160 (95.62%), Postives = 155/160 (96.88%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. ExPASy TrEMBL
Match: A0A6J1KUT5 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497399 PE=3 SV=1) HSP 1 Score: 291 bits (746), Expect = 4.90e-97 Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. ExPASy TrEMBL
Match: A0A6J1EPT6 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436515 PE=3 SV=1) HSP 1 Score: 257 bits (656), Expect = 1.05e-83 Identity = 126/151 (83.44%), Postives = 136/151 (90.07%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. ExPASy TrEMBL
Match: A0A443P4S6 (Putative germin-like protein 2-1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01463100 PE=3 SV=1) HSP 1 Score: 269 bits (687), Expect = 1.17e-83 Identity = 153/275 (55.64%), Postives = 174/275 (63.27%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. ExPASy TrEMBL
Match: A0A6J1F3Q6 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111439861 PE=3 SV=1) HSP 1 Score: 256 bits (653), Expect = 2.99e-83 Identity = 125/151 (82.78%), Postives = 136/151 (90.07%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. TAIR 10
Match: AT5G39190.1 (germin-like protein 2 ) HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47 Identity = 93/151 (61.59%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. TAIR 10
Match: AT5G39160.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47 Identity = 93/151 (61.59%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. TAIR 10
Match: AT5G39160.2 (RmlC-like cupins superfamily protein ) HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47 Identity = 93/151 (61.59%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. TAIR 10
Match: AT5G39190.2 (germin-like protein 2 ) HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47 Identity = 93/151 (61.59%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of Cp4.1LG19g05730 vs. TAIR 10
Match: AT5G39160.3 (RmlC-like cupins superfamily protein ) HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47 Identity = 93/151 (61.59%), Postives = 114/151 (75.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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