Cp4.1LG19g05640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g05640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Nuclear transcription factor Y subunit
Location	Cp4.1LG19: 7895436 .. 7898365 (-)
RNA-Seq Expression	Cp4.1LG19g05640
Synteny	Cp4.1LG19g05640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGACATTTAAATGTTGAGAGTTGAAATCTACAAACAAACAAACACTAATTCAAAATAAGATCAAAGATCTGACAGAGTCAAAGTTGCGAAGGAAAACTAAGACCAGAAGATTCCAAGAACAAAGTTGCAGATTAAATATTTGAGCTTTTTTGGGGAATTTGAGTGGCAGCCGGCAGGGACCTATCTCCGACAATGGGTATCTACCAGCTAAGATACCCATGGTCTAAATTGGCCAGCTCATCATCTCGGTCACCGCATTCCCTCTGCCCGAACTGCCCGCCCCATTCTCATAGTCATGGCCGCTCAGACACGCGGCAGGATTCTAGAAATTGTATTCTAAGCTTCAGCTGTCCCCTTTCCTCAAACTAAGAAATCAAGAAGAAACACAGAAGACGAAAAAACGGCTACAAAACTCACAGTCATCAGCTTCAGCAGACAGAATTCCCGCTTTCCAGGTGTGCTTCGCATTTCGAAACCCTACTCATGGATTTTGGGTTTCTTCTTTTTCAATTTCTCTTTTCGAATTCAGATTTTGTTGGTTTCGTGGGTTGTTCTTTCTTGGTTAGCCTGCCCGATTGTTTTTTCTATAATCTGTTTCTTTTATGTCGAGTGAATTGCTTGAAGCCAGTTATTGGATTATGATAGTACGGGCTGAAGTCCCGTTTTTCTGTTTAATGATCATATATGTATCCTGGTTTGTTGGGTAATTACCCAGAAAGGCAGAAGCCATTGGAGTACTGAGACGACTCTGAATTGTCTGGCAAAATGGGGGCCAAAAGTACATGTTATGTACGTCAATCTCATCTGATTGCTGTACACTTACCTTGTCGACCACTAGAGGACTGAAGTTAATAATCCATATTTACCAATCATTTGGTTGATCTCGTGTCGGATTGATTACATATTGCTCTTATGCTTTGCATCCTAAATACCAGTAATTGCTAATTGCTGTTGAAGGAAACTTCAAATGCAGTTGACTTCTGGGGCCTCATATGAAGGTTTATGGTTCTTGTCACCGTTCACACCTTTTATTTTTATTTTTAATTTTTAAAAAAGTAAAAAAAATAATAATTATTTCTCTTTTATATGCATTATCCCTTGCATCAATTCCGTATCCATGCAAACTCTCCCAATTTCATTAAGCTGACAAATTTGTTGGCCTTGATATCAGGTTTCACGTGGTGTTCACTACAACCCGATGACTTCTTCTGTCCACGATTATTCTGGTAACTTGACCAGACTTGTATTCCTATGTTATGGTGCTTACTTTATATTCTAGTTACATTTCAGTGTAGGATATGTTAAATCATTCGCTGAAATAGAGAGAGAACAATGCTATTTCCCCCACACTTAGCTTAGTTCTATCAGAAGTTGCATTTTGCAATTGAAAGCCAGGACTTTGTTGGTTGGTATTTTGTATTCTGACAAGGAAAAGTAGAACGACCAAAAGAAGACTTGCTATGTTTGCTTGCATTAATTACTTTCCATACAGCATCTGTTTTGTTCAGACTATAGTCTTTAAAGCGTTCTTTTGGGACATACCATGGGCTCCTTATGTGAGCTCCACTTTTCCACGTGAATATCGTCTCCATCCATTTTTTAATGTTTTTTTTATATGTACTGATATTATAGGTTACATTTGATGGTCACTTCTGCGGCTCAATAGAGTTTACTGAGCTCGACTGATTGCTTTGTGATATTACAATATTGTCTTTTTACTCCAACTGGGCCTAGATAAATATTGCTTTGGAAACTGGTTGTTCAGATAATGGTGAGGCTGATAAGCTGCAAAAGTACTCTGAATCTCAGAATCATTCTTCATCAGTCATTAATGGACTAAATCAACCCGGCATCACAGCCTCAAATCAGTATTTAACACCTCTACAAGTTGGAGCAGAACATGCTTTGGTACTAGGAGAATCTAGTTTTTAGTTTTACTTTTTCGTTGGCAACTACTTTTTTAAAGCTTATTTGACTAATTTGGATTTGTGGGACTTCTCTGCTGAAGGCACCCCCTGCTTATCCATATCCAGATCCTTATTTTAGAAGCATCTTTTCTCCTTATGATGCTCAACCGTATCCTCCACAGCCCTATGGTGGGCAACCTATGGTAAGTAATTTGTCCTCCTTCAATAATTTTGATAATTTGGCCAACATTTTCCATAGAGGTATCAAGTTGATGAGTTTGTTGGTGAGAATTGATACAAGGGGAATGGCTTTCTTGAACCTAAAGAATGAACAGCCTTTATGAATGCGGACATCAACTTGAATGAATCTTAATTTATCAGGCTGTTTTTCAATATGATTTATGACTTCTTTTATATAATTTTTACATTTTCTAGTCGTTACTTGAGTCCTTGTTTATTGCTCATATAGGTCCATCTGCAGTTGATGGGAATTCAGCAAGCTGGTGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAGCAGTATCATGGCATTTTGCGACGTAGACAGTCCCGTGCAAAGGCTGAATCAGAAAATAAAGCTCTGAAGTCTAGGAAGGTATGCAAGCACTAATATTTAGTGGTGGTAGTCCTCCACTTCCTTTAATGGTAGCAGAAGCTATCAAATTGCTTTTGTTTTTGGTTTGCTTTTCCTTTCATGTTGCTTCGTTCTTTAGTTTCTGTATATTGTGCAGCCATACTTGCATGAATCTCGACATTTGCATGCGTTGAGGAGAGCTAGGGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAGAATCAACAAAATGAAGTGGCGTCAGGTGATAAATCACATCCCAATATAAATCTTAATTCTGATAGAAGTGATCTAGCTTCTTCAGAGAACTGATGCCTGAGGCATTGTTGGTGAATGATGAACAGCGCATGCCAGCAATTGTAAGGAAATTGAAGTCCCAATA

mRNA sequence

GTTTGACATTTAAATGTTGAGAGTTGAAATCTACAAACAAACAAACACTAATTCAAAATAAGATCAAAGATCTGACAGAGTCAAAGTTGCGAAGGAAAACTAAGACCAGAAGATTCCAAGAACAAAGTTGCAGATTAAATATTTGAGCTTTTTTGGGGAATTTGAGTGGCAGCCGGCAGGGACCTATCTCCGACAATGGGTATCTACCAGCTAAGATACCCATGGTCTAAATTGGCCAGCTCATCATCTCGGTCACCGCATTCCCTCTGCCCGAACTGCCCGCCCCATTCTCATAGTCATGGCCGCTCAGACACGCGGCAGGATTCTAGAAATTGTATTCTAAGCTTCAGCTGTCCCCTTTCCTCAAACTAAGAAATCAAGAAGAAACACAGAAGACGAAAAAACGGCTACAAAACTCACAGTCATCAGCTTCAGCAGACAGAATTCCCGCTTTCCAGGTTTCACGTGGTGTTCACTACAACCCGATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCTGATAAGCTGCAAAAGTACTCTGAATCTCAGAATCATTCTTCATCAGTCATTAATGGACTAAATCAACCCGGCATCACAGCCTCAAATCAGTATTTAACACCTCTACAAGTTGGAGCAGAACATGCTTTGGCACCCCCTGCTTATCCATATCCAGATCCTTATTTTAGAAGCATCTTTTCTCCTTATGATGCTCAACCGTATCCTCCACAGCCCTATGGTGGGCAACCTATGGTCCATCTGCAGTTGATGGGAATTCAGCAAGCTGGTGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAGCAGTATCATGGCATTTTGCGACGTAGACAGTCCCGTGCAAAGGCTGAATCAGAAAATAAAGCTCTGAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCGTTGAGGAGAGCTAGGGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAGAATCAACAAAATGAAGTGGCGTCAGGTGATAAATCACATCCCAATATAAATCTTAATTCTGATAGAAGTGATCTAGCTTCTTCAGAGAACTGATGCCTGAGGCATTGTTGGTGAATGATGAACAGCGCATGCCAGCAATTGTAAGGAAATTGAAGTCCCAATA

Coding sequence (CDS)

ATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCTGATAAGCTGCAAAAGTACTCTGAATCTCAGAATCATTCTTCATCAGTCATTAATGGACTAAATCAACCCGGCATCACAGCCTCAAATCAGTATTTAACACCTCTACAAGTTGGAGCAGAACATGCTTTGGCACCCCCTGCTTATCCATATCCAGATCCTTATTTTAGAAGCATCTTTTCTCCTTATGATGCTCAACCGTATCCTCCACAGCCCTATGGTGGGCAACCTATGGTCCATCTGCAGTTGATGGGAATTCAGCAAGCTGGTGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAGCAGTATCATGGCATTTTGCGACGTAGACAGTCCCGTGCAAAGGCTGAATCAGAAAATAAAGCTCTGAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCGTTGAGGAGAGCTAGGGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAGAATCAACAAAATGAAGTGGCGTCAGGTGATAAATCACATCCCAATATAAATCTTAATTCTGATAGAAGTGATCTAGCTTCTTCAGAGAACTGA

Protein sequence

MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPPAYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNEVASGDKSHPNINLNSDRSDLASSEN

Homology

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BLAST of Cp4.1LG19g05640 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-48
Identity = 112/203 (55.17%), Postives = 142/203 (69.95%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSS+H+ SDN  + + Q+  +S +    + +  N   I  S  Y  P   G  +++AP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPY+RSIF+P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +    +
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 180

Query: 181 VASGDKSHPNINLNSDRSDLASS 204
            +  +KS    NL++ +S +A+S
Sbjct: 181 SSHEEKS----NLSAGKSAMAAS 186

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BLAST of Cp4.1LG19g05640 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-42
Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVH+ SDN E+   ++  +SQ     V +G +   I  ++ Y  P+  G        
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTR-PQVPSGRSSESIDTNSVYSEPMAHG-------- 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPY+RS+F+    Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK--NENQQ 180
           QYHGILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + K   ++++
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 180

Query: 181 NEVASGDK--SHPNINLNSDRSDLASS 204
            E A+ D+  S  + +L S++  +A+S
Sbjct: 181 EEEATSDENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of Cp4.1LG19g05640 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.0e-25
Identity = 67/143 (46.85%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 63  PYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQY 122
           PY DPY+  +   Y   P    PYGG P           + +PLP +  +EPVFVNAKQY
Sbjct: 126 PYQDPYYAGVMGAYGHHPLGFVPYGGMP----------HSRMPLPPEMAQEPVFVNAKQY 185

Query: 123 HGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNEVA 182
             ILRRRQ+RAKAE E K +KSRKPYLHESRH HA+RR RG GGRF K    E  + +  
Sbjct: 186 QAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAE 245

Query: 183 SGDKSHPNINLNSDRSDLASSEN 206
                H   + +S  SD   + N
Sbjct: 246 EKSNGHVTQSPSSSNSDQGEAWN 258

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BLAST of Cp4.1LG19g05640 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24
Identity = 86/209 (41.15%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 3   SSVHDYSDNGEADKLQKYSESQNHSSSVIN-GL--NQPGITASNQYLTPLQVGAE---HA 62
           S+  D + NGE D   K S++   S SV N G+  N P ++  N +  PL    E   H 
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHY 125

Query: 63  LAPPAYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVF 122
           +A    PY DPY+  +   Y  Q    +PY G P          +    LP D  +EPV+
Sbjct: 126 IACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPVY 185

Query: 123 VNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN 182
           VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K+E 
Sbjct: 186 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSEV 245

Query: 183 QQNEVASGDKSHPNINLNSDRSDLASSEN 206
           +  E A G         NS  S+   +++
Sbjct: 246 EAGEDAGGRDRERGSATNSSGSEQVETDS 262

[Close]

BLAST of Cp4.1LG19g05640 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.3e-22
Identity = 76/197 (38.58%), Postives = 102/197 (51.78%), Query Frame = 0


Query: 2   TSSVHDYSDNGEADKLQKY-----SESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHA 61
           + S  + S  GE     +Y     S   N+ S  I  L +P    +    T   V  +  
Sbjct: 60  SQSTEEESGGGEVASFGEYKRYGCSIVNNNLSGYIENLGKPIENYTKSITTSSMVSQDSV 119

Query: 62  LAPPAYPYPDPYFR----SIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVE 121
              P         +    S F+ + A  Y   P     + HL++MG+  + VPLP    E
Sbjct: 120 FPAPTSGQISWSLQCAETSHFNGFLAPEYASTP---TALPHLEMMGLVSSRVPLPHHIQE 179

Query: 122 -EPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKS 181
            EP+FVNAKQYH ILRRR+ RAK E++NK +K RKPYLHESRHLHAL+RARG GGRFL +
Sbjct: 180 NEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNT 239

Query: 182 NKNENQQNEVASGDKSH 189
            K +   N + S   ++
Sbjct: 240 KKLQESSNSLCSSQMAN 253

[Close]

BLAST of Cp4.1LG19g05640 vs. NCBI nr
Match: XP_023518239.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399 bits (1026), Expect = 3.83e-140
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP
Sbjct: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASGDKSHPNINLNSDRSDLASSEN
Sbjct: 181 VASGDKSHPNINLNSDRSDLASSEN 205

[Close]

BLAST of Cp4.1LG19g05640 vs. NCBI nr
Match: KAG7026424.1 (Nuclear transcription factor Y subunit A-7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 393 bits (1010), Expect = 1.05e-137
Identity = 202/205 (98.54%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQP ITASNQYLTPLQVGA HALAPP
Sbjct: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPY+RSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASGDKSHPNINLNSDRSDLASSEN
Sbjct: 181 VASGDKSHPNINLNSDRSDLASSEN 205

[Close]

BLAST of Cp4.1LG19g05640 vs. NCBI nr
Match: XP_022926734.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 390 bits (1001), Expect = 4.55e-136
Identity = 201/205 (98.05%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQP ITASNQYLTPLQVGA HALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 77

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPY+RSIFSPYDAQP PPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAQPCPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASGDKSHPNINLNSDRSDLASSEN
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

[Close]

BLAST of Cp4.1LG19g05640 vs. NCBI nr
Match: XP_023003807.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 389 bits (999), Expect = 9.18e-136
Identity = 200/205 (97.56%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHDYSDNGEADKLQKYSESQN+SSSVINGLNQP IT SNQYLTPLQVGA HALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNNSSSVINGLNQPSITTSNQYLTPLQVGAGHALAPP 77

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPY+RSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASGDKSHPNINLNSDRSDLASSEN
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

[Close]

BLAST of Cp4.1LG19g05640 vs. NCBI nr
Match: XP_022146628.1 (nuclear transcription factor Y subunit A-7 [Momordica charantia])

HSP 1 Score: 366 bits (940), Expect = 4.94e-127
Identity = 188/205 (91.71%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHDYSDNGEAD+ QKYSESQNHS SVINGLNQP I   NQY+TP QVGA HA+APP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPY+RSIF+PYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASG KS PNINLNSD+SDLASSEN
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Cp4.1LG19g05640 vs. ExPASy TrEMBL
Match: A0A6J1EG07 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111433767 PE=3 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 2.20e-136
Identity = 201/205 (98.05%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQP ITASNQYLTPLQVGA HALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 77

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPY+RSIFSPYDAQP PPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAQPCPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASGDKSHPNINLNSDRSDLASSEN
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

[Close]

BLAST of Cp4.1LG19g05640 vs. ExPASy TrEMBL
Match: A0A6J1KNN1 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111497281 PE=3 SV=1)

HSP 1 Score: 389 bits (999), Expect = 4.45e-136
Identity = 200/205 (97.56%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHDYSDNGEADKLQKYSESQN+SSSVINGLNQP IT SNQYLTPLQVGA HALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNNSSSVINGLNQPSITTSNQYLTPLQVGAGHALAPP 77

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPY+RSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASGDKSHPNINLNSDRSDLASSEN
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

[Close]

BLAST of Cp4.1LG19g05640 vs. ExPASy TrEMBL
Match: A0A6J1CZ21 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111015782 PE=3 SV=1)

HSP 1 Score: 366 bits (940), Expect = 2.39e-127
Identity = 188/205 (91.71%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHDYSDNGEAD+ QKYSESQNHS SVINGLNQP I   NQY+TP QVGA HA+APP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPY+RSIF+PYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASG KS PNINLNSD+SDLASSEN
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Cp4.1LG19g05640 vs. ExPASy TrEMBL
Match: A0A6J1ED47 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111433240 PE=3 SV=1)

HSP 1 Score: 362 bits (930), Expect = 7.99e-126
Identity = 185/205 (90.24%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHDYSDNGEAD  QKYS+S NHSSSVINGLNQP IT  NQY+ P QVGA H++APP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYP+PDPY+RSIF+PYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASGDKS PNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Cp4.1LG19g05640 vs. ExPASy TrEMBL
Match: A0A6J1IRJ2 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111478068 PE=3 SV=1)

HSP 1 Score: 360 bits (925), Expect = 4.62e-125
Identity = 184/205 (89.76%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVHD+SDNGEAD  QKYS+S NHSSSVINGLNQP IT  NQY+ P QVGA H++APP
Sbjct: 1   MTSSVHDHSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYP+PDPY+RSIF+PYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 205
           VASGDKS PNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Cp4.1LG19g05640 vs. TAIR 10
Match: AT1G30500.2 (nuclear factor Y, subunit A7 )

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-49
Identity = 112/203 (55.17%), Postives = 142/203 (69.95%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSS+H+ SDN  + + Q+  +S +    + +  N   I  S  Y  P   G  +++AP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPY+RSIF+P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +    +
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 180

Query: 181 VASGDKSHPNINLNSDRSDLASS 204
            +  +KS    NL++ +S +A+S
Sbjct: 181 SSHEEKS----NLSAGKSAMAAS 186

[Close]

BLAST of Cp4.1LG19g05640 vs. TAIR 10
Match: AT1G30500.1 (nuclear factor Y, subunit A7 )

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-46
Identity = 108/203 (53.20%), Postives = 138/203 (67.98%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSS+H+ SDN  + + Q+  +S +    + +  N   I  S  Y  P   G  +++AP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPY+RSIF+P      PPQPY G       LMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG-------LMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +    +
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 180

Query: 181 VASGDKSHPNINLNSDRSDLASS 204
            +  +KS    NL++ +S +A+S
Sbjct: 181 SSHEEKS----NLSAGKSAMAAS 182

[Close]

BLAST of Cp4.1LG19g05640 vs. TAIR 10
Match: AT2G34720.1 (nuclear factor Y, subunit A4 )

HSP 1 Score: 174.5 bits (441), Expect = 8.9e-44
Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60
           MTSSVH+ SDN E+   ++  +SQ     V +G +   I  ++ Y  P+  G        
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTR-PQVPSGRSSESIDTNSVYSEPMAHG-------- 60

Query: 61  AYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPYPDPY+RS+F+    Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK--NENQQ 180
           QYHGILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + K   ++++
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 180

Query: 181 NEVASGDK--SHPNINLNSDRSDLASS 204
            E A+ D+  S  + +L S++  +A+S
Sbjct: 181 EEEATSDENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of Cp4.1LG19g05640 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 116.3 bits (290), Expect = 2.9e-26
Identity = 67/143 (46.85%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 63  PYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQY 122
           PY DPY+  +   Y   P    PYGG P           + +PLP +  +EPVFVNAKQY
Sbjct: 126 PYQDPYYAGVMGAYGHHPLGFVPYGGMP----------HSRMPLPPEMAQEPVFVNAKQY 185

Query: 123 HGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNEVA 182
             ILRRRQ+RAKAE E K +KSRKPYLHESRH HA+RR RG GGRF K    E  + +  
Sbjct: 186 QAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAE 245

Query: 183 SGDKSHPNINLNSDRSDLASSEN 206
                H   + +S  SD   + N
Sbjct: 246 EKSNGHVTQSPSSSNSDQGEAWN 258

[Close]

BLAST of Cp4.1LG19g05640 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 86/209 (41.15%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 3   SSVHDYSDNGEADKLQKYSESQNHSSSVIN-GL--NQPGITASNQYLTPLQVGAE---HA 62
           S+  D + NGE D   K S++   S SV N G+  N P ++  N +  PL    E   H 
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHY 125

Query: 63  LAPPAYPYPDPYFRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVF 122
           +A    PY DPY+  +   Y  Q    +PY G P          +    LP D  +EPV+
Sbjct: 126 IACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPVY 185

Query: 123 VNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN 182
           VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K+E 
Sbjct: 186 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSEV 245

Query: 183 QQNEVASGDKSHPNINLNSDRSDLASSEN 206
           +  E A G         NS  S+   +++
Sbjct: 246 EAGEDAGGRDRERGSATNSSGSEQVETDS 262

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g05640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JP1	2.0e-48	55.17	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	1.3e-42	51.21	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	4.0e-25	46.85	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LXV5	2.0e-24	41.15	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SYH4	9.3e-22	38.58	Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Cp4.1LG19g05640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518239.1	3.83e-140	100.00	nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita pepo subsp...	[more]
KAG7026424.1	1.05e-137	98.54	Nuclear transcription factor Y subunit A-7 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022926734.1	4.55e-136	98.05	nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita moschata]	[more]
XP_023003807.1	9.18e-136	97.56	nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita maxima]	[more]
XP_022146628.1	4.94e-127	91.71	nuclear transcription factor Y subunit A-7 [Momordica charantia]	[more]

BLAST of Cp4.1LG19g05640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EG07	2.20e-136	98.05	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1KNN1	4.45e-136	97.56	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114972...	[more]
A0A6J1CZ21	2.39e-127	91.71	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1ED47	7.99e-126	90.24	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IRJ2	4.62e-125	89.76	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114780...	[more]

BLAST of Cp4.1LG19g05640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30500.2	1.4e-49	55.17	nuclear factor Y, subunit A7	[more]
AT1G30500.1	1.5e-46	53.20	nuclear factor Y, subunit A7	[more]
AT2G34720.1	8.9e-44	51.21	nuclear factor Y, subunit A4	[more]
AT3G20910.1	2.9e-26	46.85	nuclear factor Y, subunit A9	[more]
AT5G12840.1	1.4e-25	41.15	nuclear factor Y, subunit A1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 114..136 score: 73.91 coord: 145..168 score: 78.01
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 110..171 e-value: 4.2E-35 score: 132.6
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 113..168 e-value: 4.1E-26 score: 91.3
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 1..187
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 111..171 score: 36.842766
None	No IPR available	GENE3D	6.10.250.2430		coord: 111..172 e-value: 2.9E-31 score: 109.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..205
None	No IPR available	PANTHER	PTHR12632:SF66	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7	coord: 1..187
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 116..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g05640.1	Cp4.1LG19g05640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity