
Cp4.1LG19g03940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACAGCGTAGACGCCATTTCTTTATTACTCCATCCTCCTCTGAACAATCTCTCTTTCTCTCTCGCTAGGGTTCTCTGGCGGAAGAACCGCCGAATAAAACCCTAAATCTTACTCAGATTCTTCCGTAGTTAGGCTCTCCGGACTCCAATCCAAGAAGATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGACCGCTAGGCGTACGAAATTTCTCATCAATGATATCCTTTTACTCTCTAGTTTAATGGGATTTCCTCTTTCAATTCTTCTTATGTTTCCTGTATTATTTACGTTTTTTTTTTTGGGTGTTTTACTTAACTCGATGAGTTGGTGAATCACGCGACGATATGGTTTACGATGCGTTGAAGAAACCTGAGGTGGAGAGGCCTTCTCTACCTGTTGATGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGAGTATGTTCTTTCCTCCGTTAATGTTTTTTTTATTACTTGACATGAAATTCATGTAGAAAATTGTTTCTCATGCTAGTTGAATCAGCCGAATTTAATATCAAGGAATAAATTCCATTTAATTCCATTCTGACTTTAAATGAATCATTAGTGTTCATGATTAGGTTTAGATGGAGCTGGAGGGCTGAAATATTTAGTGAAGTATTGTTAGCTTCTTCTTGAATGAAATTCAGAAGTAAATGTTGAGGTTTACTACTTATAAGGGATTAGTGGAATGGGAAAAACAGTGTAGTGGGTTGGGGCTTACGTATTTTGATTTAATTACTGATGGCGGTTGGAGTGCTATAATATTTGTATTCATGATTGATTTGTATTCATGATTGATGATTTCAGCCGATACTTTGCGAATGTATCTGTGAGGGATGAGCATTTCAAAACCAAGCGTCACAGGAAGCGGTAAGCTAAGCCAATTTTCACTTGCTCTTGCTTCTTTTTGTTACGTTTTTAATTCGCTTTTAGTTTTGCTTTGTGAATCTGTAGACAATTTCACGTAATGAATTGTTCTCTCTCCATTGGTGTATAGGTAAAATTATAACTTAATTTTAAATAATGGAATGAACTACCTTAAGCCGTGCTTGATAACCATTTGGATTTTGGTTTTTGAAAACTATGGTTGTTTTCAAAATTTGACTTGGATTTGGAAAATATATGTGAAAAGTAGATAACGAAACAAAGATACCCATCAATAGAAGTAGCGTTTACAAATTCAATTTTCGAAAACAAAAAAGTGATAAACGGGGGCCTTAATTTCTTAAGTTTCCTCTCTCGATCCTTTCTTAATATGTTATAGATATGGCACATGTGTTTGTGACTCTGATTACATTCATTTGATTGTAAGATATGAAGTTGGTATGATTGTATTAGAGAAGAGCATTTGATTTGCAATTGTTAACAATGTTACTATCCACAACGACAATGGTGCAGGGTAAAACTTATGATGGGTCCTGCACCCCACACGCAACTGGACGCCGATTTAGCTGCTGGGATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGAGCTTATCACACAACTGAAATCATTTTTGGTGTTGTAGAGAGCTTAGAATGAGGTTTGTTTCTTGTTTAACCAAAAGGATCAATTTTATCATACATTTTATGCCCATGTATTGTATTTTCCGAGTTCGTTTTATGAATCAATTTTAGCTTCGTATTTCACACCAGCTTCCTAGTTTCGTGTTATGTTACATTCTTACCTAATGTAACCCCATGGCTCTTCTTAGTGATCATGGAGAGCCGTGTTAATAATAAAAGGTTTATAGTGAATGACT TACAGCGTAGACGCCATTTCTTTATTACTCCATCCTCCTCTGAACAATCTCTCTTTCTCTCTCGCTAGGGTTCTCTGGCGGAAGAACCGCCGAATAAAACCCTAAATCTTACTCAGATTCTTCCGTAGTTAGGCTCTCCGGACTCCAATCCAAGAAGATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGACCGCTAGGCGTACGAAATTTCTCATCAATGGCGACGATATGGTTTACGATGCGTTGAAGAAACCTGAGGTGGAGAGGCCTTCTCTACCTGTTGATGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGACCGATACTTTGCGAATGTATCTGTGAGGGATGAGCATTTCAAAACCAAGCGTCACAGGAAGCGGGTAAAACTTATGATGGGTCCTGCACCCCACACGCAACTGGACGCCGATTTAGCTGCTGGGATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGAGCTTATCACACAACTGAAATCATTTTTGGTGTTGTAGAGAGCTTAGAATGAGGTTTGTTTCTTGTTTAACCAAAAGGATCAATTTTATCATACATTTTATGCCCATGTATTGTATTTTCCGAGTTCGTTTTATGAATCAATTTTAGCTTCGTATTTCACACCAGCTTCCTAGTTTCGTGTTATGTTACATTCTTACCTAATGTAACCCCATGGCTCTTCTTAGTGATCATGGAGAGCCGTGTTAATAATAAAAGGTTTATAGTGAATGACT ATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGACCGCTAGGCGTACGAAATTTCTCATCAATGGCGACGATATGGTTTACGATGCGTTGAAGAAACCTGAGGTGGAGAGGCCTTCTCTACCTGTTGATGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGACCGATACTTTGCGAATGTATCTGTGAGGGATGAGCATTTCAAAACCAAGCGTCACAGGAAGCGGGTAAAACTTATGATGGGTCCTGCACCCCACACGCAACTGGACGCCGATTTAGCTGCTGGGATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGA MGGKCPHRSVKKRRYSHKTARRTKFLINGDDMVYDALKKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMMGPAPHTQLDADLAAGMGMPDNGPKLMAM Homology
BLAST of Cp4.1LG19g03940 vs. ExPASy Swiss-Prot
Match: B0BLT0 (Zinc finger protein 593 OS=Xenopus tropicalis OX=8364 GN=znf593 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13 Identity = 48/106 (45.28%), Postives = 64/106 (60.38%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. ExPASy Swiss-Prot
Match: Q08004 (Bud site selection protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BUD20 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11 Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. ExPASy Swiss-Prot
Match: Q9U239 (Zinc finger protein 593 homolog OS=Caenorhabditis elegans OX=6239 GN=Y56A3A.18 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. ExPASy Swiss-Prot
Match: Q553S1 (Zinc finger protein 593 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275351 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.7e-10 Identity = 38/117 (32.48%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. ExPASy Swiss-Prot
Match: Q9P370 (Zinc finger protein bud20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bud20 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09 Identity = 36/105 (34.29%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. NCBI nr
Match: XP_022962632.1 (zinc finger protein 593 [Cucurbita moschata] >XP_023517301.1 zinc finger protein 593 [Cucurbita pepo subsp. pepo] >KAG7027247.1 Zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 252 bits (643), Expect = 1.47e-84 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. NCBI nr
Match: XP_022972762.1 (zinc finger protein 593 [Cucurbita maxima]) HSP 1 Score: 250 bits (639), Expect = 6.01e-84 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. NCBI nr
Match: KAG6595226.1 (Zinc finger protein 593, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 250 bits (639), Expect = 7.59e-84 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. NCBI nr
Match: XP_022143723.1 (zinc finger protein 593 [Momordica charantia]) HSP 1 Score: 240 bits (612), Expect = 7.92e-80 Identity = 111/119 (93.28%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. NCBI nr
Match: XP_008462489.1 (PREDICTED: zinc finger protein 593 [Cucumis melo]) HSP 1 Score: 239 bits (610), Expect = 1.60e-79 Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. ExPASy TrEMBL
Match: A0A6J1HD68 (zinc finger protein 593 OS=Cucurbita moschata OX=3662 GN=LOC111463050 PE=4 SV=1) HSP 1 Score: 252 bits (643), Expect = 7.14e-85 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. ExPASy TrEMBL
Match: A0A6J1I5Q7 (zinc finger protein 593 OS=Cucurbita maxima OX=3661 GN=LOC111471272 PE=4 SV=1) HSP 1 Score: 250 bits (639), Expect = 2.91e-84 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. ExPASy TrEMBL
Match: A0A6J1CRE9 (zinc finger protein 593 OS=Momordica charantia OX=3673 GN=LOC111013565 PE=4 SV=1) HSP 1 Score: 240 bits (612), Expect = 3.83e-80 Identity = 111/119 (93.28%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. ExPASy TrEMBL
Match: A0A1S3CH13 (zinc finger protein 593 OS=Cucumis melo OX=3656 GN=LOC103500829 PE=4 SV=1) HSP 1 Score: 239 bits (610), Expect = 7.74e-80 Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. ExPASy TrEMBL
Match: A0A0A0KHA1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446540 PE=4 SV=1) HSP 1 Score: 238 bits (607), Expect = 2.22e-79 Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Cp4.1LG19g03940 vs. TAIR 10
Match: AT2G36930.1 (zinc finger (C2H2 type) family protein ) HSP 1 Score: 193.7 bits (491), Expect = 8.2e-50 Identity = 87/116 (75.00%), Postives = 100/116 (86.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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