Cp4.1LG19g02640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACCGACCTCGAACTTCAAGTTTCTATGCCTTACATCGGCATAACTCCTTCGTCTACCTTGGGTCGTACGCATTCTCATCTTGATCTTTTACACGACCTCATTTCATTTCAATGTATTAGGGGCCTACAACGTACCACCTGTTTGTAGGGAGGAAAGCGATTTTGAAATCCAAGTTCTTGTCGTTCAGCGGATGTGATCCCATTACTACATCATTTCTGTGTTCGAGTGAATCTAATTCCAATCACTGTGCGCTGAAGATTTCAATCTCTCTTCCGCACGGCAGTTTCAATGCCGCTTCACAGAACCCAGAAGCCAAAACCCAAACGCAGATCCCCACTCCTCTTCTTCTTCTTCCTTGCCCTCGCTGCCATTACGCTTCTTTTCATTTTTTCCTCTCTCATTTCCACCAATAAAATCTTTACATTCAAGAATCTGACCCCCAAACAGAGCCGTAACCGCTACGTTTTTAGTGTGAACGATAAGTTCTTGTACTGGGGCAGCAGAATCGACTGCCCAGGGAAGCACTGCGAGTCTTGTGAGGGTTTGGGTCACCAGGAGTCTAGCTTGAGGTGTGCTCTTGAGGAAGCCATGTTCCTCCAGAGGTAATTTTTATGAAGTTCTTCTGAATTCTTTGGTTTAATTCTTGATTGGAGGCATTATCTTCTTGTTTAATTTGTTGGATTGGCATGATCATGTTTCTGTCTGGAAGGGATTTTGGATTAGAATTAGATGTTTAAACAATTCTGTATAGATTTAAAGCAGCTACTTACTTTTGCATGCAACATTCAACTTAGAAACTTCTGTTTGCCCTTGATTGATGTATATACTACGTTAATTGCTCGGCGGTGAGGTGCCATTTAGTTCTTTCTCTTTTGTAATGTGTGCCGGCACTGAAACTAGAACTAATGGAGACAAAGCGGGTCTAGTGAAACTATAACTAATGGAGACAAAGCGGGTCTAGTAGTCGGGGTAGGAAGATTTTTTAGCTTTGATGGATTAGGTGTGTGGTAAGTCAGACGAGATCCTACGGTTCACTTTTTTTTGTACCTTTCACATCCCACTCCACTTCACAAGGGGAAGTGGATATTACATCCGGCCTTACTAGAAAGATAGACTTTGGAACTTCCAAGGCCAAGAAGGAAGACCTGGATGATCCGCTCAAACTCGTTTCAGTATTTGTCCTTCCTTTAAAAGCCCCCGTGCCATTTCGTCCAACATAATTTATTGAACGAATGCTTTTGCATATCCTACTTAGACAATTTACTAATCTTCCTTTTTGTTGCAGAACATTTGTAATGCCCTCTAGAATGTGTATCAACCCTATTCATAATAAGAAAGGGATTCTTCATCAGCCCAACAATGCAAGCTCCGAGGAAAGGTGTTTCTTATGACAAACATGTTCTATTGACTTGATTCTCTTCCTGCTTCAAACTAAGACGCAAACTGCATCACATAAAAGTTCATCTGTTCTCTGTTCTTTCATATAATTGTGATGTTTTTATGTATTGTAGTTGGGATGCTAACTCCTGTGCTATGGACTCTTTGTACGATATGGATCTTATATCCGACACCATACCAGTGATTTTAGACGACTCGAAAATATGGTATCAGGTGTTGTCAACTGGTATGAAATTGGGAGCTAGAGCAGTTGCCGATGTTGAGCAAGTTGGTCGTGTTGAACTTAGAGACAACAGTCATTACTCCAATCTTTTGCTAATAAATCGAACTGCTAGCCCTCTTTCATGGTAAATCAAATCTTGGAAAATAAGATTCTTTTTACCTCTGTTGTGCATGTGTAAGTAAAGCTGAAGTAGGCTTGTCCTTTTAATGTCTTGTTTTTATGCATTTCTTTTCAACTTAGTGTGACAAATATTTCGTTTTAAGATCCTAAGTTATGAATTATTTGGGTGTTAATATGATCATAACTCTTTAGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCATACAACTTTCTTCCTTCAATGGCAGCAGAGAACTTGAGAGATGCAGCTGAGAAGGTATTTTTTTGAAATTATATTTGGTTCTTTCTTTTGTTATCCATTGCATTGCATTGCATACACATAAATTATTTGAATTCATTTCCGTTTTTCTATGTTGGTGTTTTATGGTCTTAGACTCTCAACTTCAGTGTTATTAGATTAGGATTTGGTTTGTTTGGACTTTCCGGATATGTCTAAGCATAACCTCACCACAATGGAAACATAATGAGTTCAACTTTAATTTAGATGCTCTTGAATGTGTCTAGCAAACAACATTCAAGCAAACATCTTGTTGAAGTCTCGCGAAATAGTTTTTCTCTTTTCTTTTCAATGATAACTAGGGTGTACATTCAACCCGACAATTCGGACCAACCTAACCCGAACTAGAAGGGTTGAGTTCGGTTCGGTTAACATTTTGGGTTGGGTTGGATTAGGTTCATTTTTCTGAACCCGAACTGAATCGGTTCGGTTTCGGGTTCGTGGGACAAAACCTTTGAGTTGACCCGAGCCAAATAAAAATGTATAAAATATATTAAGAATCCTTCTGTATTAATGGGTTTGTTAGAGTGGTACTTTGACCAGTCTAAAGAGTCTCATGCTCAAGTTTGATGCCAGGCAAATACATTTTATATATATATATATATGTGTATATATATATATATATGTTGGGTTGGGACCCAACCCGTACCATGTACACCCATAATGATAACTAGAATATTAGGAGTTATCACTCGTTGCGTTTATCTCAGGTCCCATCATTAGTTTTCCACCCACTAGGATGACTCAAAATTATGTGGTGCCCTCTGATATGTATTTTATGTCGGTGGTTCCCTCAAAATTGATCGAAGATTCGTATTTTATGTCAGTGGTTCCCTCTTGGAAACTGCCTACAAGGCACATTGATGATTGGTGATCTTTATATGCTTCATAAAGGAAGATTTAGAACACAGGTGTTAAATGTCAATAAGAGTATAGCACAACTGGCATAAATATGTATGCTTGATCAAGAGGTTAGAGGTTCGATTCTCCTATCCCATATCAAGAACATAAGGGTTAGTTCCGTTAGAGAAATTTAGAAAGAGTAATTAGCTATGATGGGTGGTTGGTAGTTATTTGGCTTGCTTAGGGTTAGAGGATAAATTTGTTTCCAGTTCTCTGTTTCTCTTTCGGATACTTGTGTTTTGTACCAATAACTTCATGAATCTCTCATCTTATCGATTATCCTGAAACGAATGCTGATTAATAGATTAAAGAGGTACTTGGCAACTATGGCGCCGTCCATGTTCGTCGGGGAGATAAAATAAAGACGAGAAAGGATAGGTTTGGCGTTGATAGAAGCTTACATCCACATCTTGACAGAGATACACGACCCGAGTTTATGGTGAAGAGAATTGCAAAGTGGGTTCCGGCAGGGCACACACTTTTTATTGCTTCAAATGAGAGAACTCCTGGGTTCTTTTCACCCCTCTCTGCTCGGTGAGCCCTTCTTACTCACCTTCTGGAGTTAGAGCTGACGCATTGGTTCCTTGCCATTTAGTAGTAAAAAGACATTTATTCAATGGATGTTGTGTTCCAATATAGACATCAAAAACTCTCTTATTCCTGTTTTAACCGAGAATAAAGAATGAAGTGTTTCGTCCCTTGGGGCTTCGATGCATTAGTCCTTGCCTTGATTCTTGATACCTCGGTTTTGCAGGTACAAGTTGGCATATTCGTCGAACTATAGCCATATTCTGGATCCAGTGGTTAAGAACAATTATCAGTTGTTCATGATCGAAAGGCTGATTATGGGAGGTGCGAAGACATTCATCAGAACGTTCAAAGAAGACGATACAGATCTTAGCCTCACGGATGACCCAAAGAAGAACACAAAAAATTGGCAAAAACCTGTGTACACAGATGAGGAAGAAAGAAGGTGAGAAGGATTTGGGCTGTGTGGGAAAATGTGTTGGAGAGGTAATTTTGATCCTTGTTAATGCCAACCTACAAAAGCTTTTCTTATTGTTCATTGAAAAGCTTCATAGTGAAGAAGACATCAAATGTTGAAGGAGAGATAGGTGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGTAAATGTGTAGTATAAAAATATGATCCAGGTTTCTGAATTTCATTACTACCATTTTCTTTTATTTTGGAAATATGATAACATGAATTTCATGCT TACCGACCTCGAACTTCAAGTTTCTATGCCTTACATCGGCATAACTCCTTCGTCTACCTTGGGTCGTACGCATTCTCATCTTGATCTTTTACACGACCTCATTTCATTTCAATGTATTAGGGGCCTACAACGTACCACCTGTTTGTAGGGAGGAAAGCGATTTTGAAATCCAAGTTCTTGTCGTTCAGCGGATGTGATCCCATTACTACATCATTTCTGTGTTCGAGTGAATCTAATTCCAATCACTGTGCGCTGAAGATTTCAATCTCTCTTCCGCACGGCAGTTTCAATGCCGCTTCACAGAACCCAGAAGCCAAAACCCAAACGCAGATCCCCACTCCTCTTCTTCTTCTTCCTTGCCCTCGCTGCCATTACGCTTCTTTTCATTTTTTCCTCTCTCATTTCCACCAATAAAATCTTTACATTCAAGAATCTGACCCCCAAACAGAGCCGTAACCGCTACGTTTTTAGTGTGAACGATAAGTTCTTGTACTGGGGCAGCAGAATCGACTGCCCAGGGAAGCACTGCGAGTCTTGTGAGGGTTTGGGTCACCAGGAGTCTAGCTTGAGGTGTGCTCTTGAGGAAGCCATGTTCCTCCAGAGAACATTTGTAATGCCCTCTAGAATGTGTATCAACCCTATTCATAATAAGAAAGGGATTCTTCATCAGCCCAACAATGCAAGCTCCGAGGAAAGTTGGGATGCTAACTCCTGTGCTATGGACTCTTTGTACGATATGGATCTTATATCCGACACCATACCAGTGATTTTAGACGACTCGAAAATATGGTATCAGGTGTTGTCAACTGGTATGAAATTGGGAGCTAGAGCAGTTGCCGATGTTGAGCAAGTTGGTCGTGTTGAACTTAGAGACAACAGTCATTACTCCAATCTTTTGCTAATAAATCGAACTGCTAGCCCTCTTTCATGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCATACAACTTTCTTCCTTCAATGGCAGCAGAGAACTTGAGAGATGCAGCTGAGAAGATTAAAGAGGTACTTGGCAACTATGGCGCCGTCCATGTTCGTCGGGGAGATAAAATAAAGACGAGAAAGGATAGGTTTGGCGTTGATAGAAGCTTACATCCACATCTTGACAGAGATACACGACCCGAGTTTATGGTGAAGAGAATTGCAAAGTGGGTTCCGGCAGGGCACACACTTTTTATTGCTTCAAATGAGAGAACTCCTGGGTTCTTTTCACCCCTCTCTGCTCGGTACAAGTTGGCATATTCGTCGAACTATAGCCATATTCTGGATCCAGTGGTTAAGAACAATTATCAGTTGTTCATGATCGAAAGGCTGATTATGGGAGGTGCGAAGACATTCATCAGAACGTTCAAAGAAGACGATACAGATCTTAGCCTCACGGATGACCCAAAGAAGAACACAAAAAATTGGCAAAAACCTGTGTACACAGATGAGGAAGAAAGAAGGTGAGAAGGATTTGGGCTGTGTGGGAAAATGTGTTGGAGAGGTAATTTTGATCCTTGTTAATGCCAACCTACAAAAGCTTTTCTTATTGTTCATTGAAAAGCTTCATAGTGAAGAAGACATCAAATGTTGAAGGAGAGATAGGTGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGTAAATGTGTAGTATAAAAATATGATCCAGGTTTCTGAATTTCATTACTACCATTTTCTTTTATTTTGGAAATATGATAACATGAATTTCATGCT ATGCCGCTTCACAGAACCCAGAAGCCAAAACCCAAACGCAGATCCCCACTCCTCTTCTTCTTCTTCCTTGCCCTCGCTGCCATTACGCTTCTTTTCATTTTTTCCTCTCTCATTTCCACCAATAAAATCTTTACATTCAAGAATCTGACCCCCAAACAGAGCCGTAACCGCTACGTTTTTAGTGTGAACGATAAGTTCTTGTACTGGGGCAGCAGAATCGACTGCCCAGGGAAGCACTGCGAGTCTTGTGAGGGTTTGGGTCACCAGGAGTCTAGCTTGAGGTGTGCTCTTGAGGAAGCCATGTTCCTCCAGAGAACATTTGTAATGCCCTCTAGAATGTGTATCAACCCTATTCATAATAAGAAAGGGATTCTTCATCAGCCCAACAATGCAAGCTCCGAGGAAAGTTGGGATGCTAACTCCTGTGCTATGGACTCTTTGTACGATATGGATCTTATATCCGACACCATACCAGTGATTTTAGACGACTCGAAAATATGGTATCAGGTGTTGTCAACTGGTATGAAATTGGGAGCTAGAGCAGTTGCCGATGTTGAGCAAGTTGGTCGTGTTGAACTTAGAGACAACAGTCATTACTCCAATCTTTTGCTAATAAATCGAACTGCTAGCCCTCTTTCATGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCATACAACTTTCTTCCTTCAATGGCAGCAGAGAACTTGAGAGATGCAGCTGAGAAGATTAAAGAGGTACTTGGCAACTATGGCGCCGTCCATGTTCGTCGGGGAGATAAAATAAAGACGAGAAAGGATAGGTTTGGCGTTGATAGAAGCTTACATCCACATCTTGACAGAGATACACGACCCGAGTTTATGGTGAAGAGAATTGCAAAGTGGGTTCCGGCAGGGCACACACTTTTTATTGCTTCAAATGAGAGAACTCCTGGGTTCTTTTCACCCCTCTCTGCTCGGTACAAGTTGGCATATTCGTCGAACTATAGCCATATTCTGGATCCAGTGGTTAAGAACAATTATCAGTTGTTCATGATCGAAAGGCTGATTATGGGAGGTGCGAAGACATTCATCAGAACGTTCAAAGAAGACGATACAGATCTTAGCCTCACGGATGACCCAAAGAAGAACACAAAAAATTGGCAAAAACCTGTGTACACAGATGAGGAAGAAAGAAGGTGA MPLHRTQKPKPKRRSPLLFFFFLALAAITLLFIFSSLISTNKIFTFKNLTPKQSRNRYVFSVNDKFLYWGSRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRTFVMPSRMCINPIHNKKGILHQPNNASSEESWDANSCAMDSLYDMDLISDTIPVILDDSKIWYQVLSTGMKLGARAVADVEQVGRVELRDNSHYSNLLLINRTASPLSWFMECKDRNNRSAILLPYNFLPSMAAENLRDAAEKIKEVLGNYGAVHVRRGDKIKTRKDRFGVDRSLHPHLDRDTRPEFMVKRIAKWVPAGHTLFIASNERTPGFFSPLSARYKLAYSSNYSHILDPVVKNNYQLFMIERLIMGGAKTFIRTFKEDDTDLSLTDDPKKNTKNWQKPVYTDEEERR Homology
BLAST of Cp4.1LG19g02640 vs. NCBI nr
Match: XP_023518214.1 (uncharacterized protein LOC111781754 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 803 bits (2075), Expect = 1.47e-293 Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. NCBI nr
Match: XP_022931947.1 (uncharacterized protein LOC111438216 isoform X1 [Cucurbita moschata]) HSP 1 Score: 776 bits (2004), Expect = 1.06e-282 Identity = 386/400 (96.50%), Postives = 392/400 (98.00%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. NCBI nr
Match: KAG7027428.1 (hypothetical protein SDJN02_11441, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 774 bits (1999), Expect = 6.11e-282 Identity = 385/400 (96.25%), Postives = 392/400 (98.00%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. NCBI nr
Match: KAG6595419.1 (hypothetical protein SDJN03_11972, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 773 bits (1996), Expect = 1.75e-281 Identity = 384/400 (96.00%), Postives = 391/400 (97.75%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. NCBI nr
Match: XP_022931948.1 (uncharacterized protein LOC111438216 isoform X2 [Cucurbita moschata]) HSP 1 Score: 714 bits (1844), Expect = 1.08e-258 Identity = 363/400 (90.75%), Postives = 369/400 (92.25%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. ExPASy TrEMBL
Match: A0A6J1EV90 (uncharacterized protein LOC111438216 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438216 PE=4 SV=1) HSP 1 Score: 776 bits (2004), Expect = 5.12e-283 Identity = 386/400 (96.50%), Postives = 392/400 (98.00%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. ExPASy TrEMBL
Match: A0A6J1F074 (uncharacterized protein LOC111438216 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438216 PE=4 SV=1) HSP 1 Score: 714 bits (1844), Expect = 5.21e-259 Identity = 363/400 (90.75%), Postives = 369/400 (92.25%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. ExPASy TrEMBL
Match: A0A5D3DWC1 (O-fucosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00060 PE=3 SV=1) HSP 1 Score: 699 bits (1804), Expect = 2.07e-252 Identity = 351/409 (85.82%), Postives = 369/409 (90.22%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. ExPASy TrEMBL
Match: A0A1S3C1H9 (O-fucosyltransferase family protein OS=Cucumis melo OX=3656 GN=LOC103495824 PE=3 SV=1) HSP 1 Score: 699 bits (1804), Expect = 2.07e-252 Identity = 351/409 (85.82%), Postives = 369/409 (90.22%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. ExPASy TrEMBL
Match: A0A6J1HRU4 (O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111467213 PE=3 SV=1) HSP 1 Score: 695 bits (1793), Expect = 1.06e-250 Identity = 345/409 (84.35%), Postives = 367/409 (89.73%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. TAIR 10
Match: AT3G56750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41150.2); Has 128 Blast hits to 128 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). ) HSP 1 Score: 523.9 bits (1348), Expect = 1.2e-148 Identity = 260/400 (65.00%), Postives = 319/400 (79.75%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. TAIR 10
Match: AT2G41150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 127 Blast hits to 127 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 518.5 bits (1334), Expect = 4.9e-147 Identity = 252/378 (66.67%), Postives = 307/378 (81.22%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. TAIR 10
Match: AT2G41150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 305.8 bits (782), Expect = 5.0e-83 Identity = 148/235 (62.98%), Postives = 185/235 (78.72%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. TAIR 10
Match: AT4G12700.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04280.1); Has 136 Blast hits to 136 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). ) HSP 1 Score: 82.4 bits (202), Expect = 8.9e-16 Identity = 65/263 (24.71%), Postives = 118/263 (44.87%), Query Frame = 0
BLAST of Cp4.1LG19g02640 vs. TAIR 10
Match: AT2G04280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 79.3 bits (194), Expect = 7.5e-15 Identity = 75/319 (23.51%), Postives = 135/319 (42.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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